| Clone Name | rbags37p03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tgccaaaaaagaacacccac 154 |||||||||||||||||||| Sbjct: 38203 tgccaaaaaagaacacccac 38222
>gb|AC126799.3| Mus musculus BAC clone RP24-388B22 from chromosome 13, complete sequence Length = 168873 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgtacatgtctacagccatg 193 |||||||||||||||||||| Sbjct: 65357 tgtacatgtctacagccatg 65338
>emb|AL603910.6| Human DNA sequence from clone RP11-505P4 on chromosome 6 Contains the 5' end of the C6orf150 gene for chromosome 6 open reading frame 150 , the MTO1 gene for mitochondrial translation optimization 1 homolog (S. cerevisiae), the EEF1A1 gene for eukaryotic translation elongation factor 1 alpha 1, a thymosin beta (TMSNB) pseudogene and 3 CpG islands, complete sequence Length = 134105 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ctaggcatatgtacatgtct 184 |||||||||||||||||||| Sbjct: 64574 ctaggcatatgtacatgtct 64593
>emb|AL031003.1|HS422G23 Human DNA sequence from clone RP3-422G23 on chromosome 6q24 Contains the gene for KIAA1244 protein, a macrophage myristoylated alanine-rich C kinase substrate (MACMARCKS) pseudogene, a pseudogene similar to Mus musculus upregulated during skeletal muscle growth 5 (Usmg5), the gene for chromosome 6 open reading frame 34 (C6orf34) (SOUL) and a CpG island, complete sequence Length = 159344 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctgccaaaaaagaacacc 151 |||||||||||||||||||| Sbjct: 92630 ccctgccaaaaaagaacacc 92611
>emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in linkage group 3, complete sequence Length = 192468 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcatatgtacatgtctacag 188 |||||||||||||||||||| Sbjct: 39242 gcatatgtacatgtctacag 39223
>gb|AF442963.1| Homo sapiens MTO1-like protein gene, complete cds; nuclear gene for mitochondrial product Length = 40439 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ctaggcatatgtacatgtct 184 |||||||||||||||||||| Sbjct: 10131 ctaggcatatgtacatgtct 10150
>gb|AC025755.5| Homo sapiens chromosome 5 clone CTD-2045M21, complete sequence Length = 111634 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aaaagaacacccacacccac 160 |||||||||||||||||||| Sbjct: 75227 aaaagaacacccacacccac 75208
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tgccaaaaaagaacacccac 154 |||||||||||||||||||| Sbjct: 9909 tgccaaaaaagaacacccac 9928 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,245,873 Number of Sequences: 3902068 Number of extensions: 1245873 Number of successful extensions: 79498 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79482 Number of HSP's gapped (non-prelim): 16 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)