| Clone Name | rbags38e09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ303373.1|TAE303373 Triticum aestivum mRNA for cytochrome P450 reductase (r2 gene) Length = 2420 Score = 720 bits (363), Expect = 0.0 Identities = 494/536 (92%), Gaps = 4/536 (0%) Strand = Plus / Minus Query: 179 aacggcaccaatcatattcgaaatcgaagccgcatttctcatgttcgatcgaccatttct 238 |||||| |||||||||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 2282 aacggcgccaatcatattcgaaatcagagccgcatttctcatgttcggtccatcatttca 2223 Query: 239 ctagatttcctacgttgtgttgaatcatccgttcgtttccgccgcaattgttaccagacg 298 |||||||||||| || |||||||||| | |||| ||| | ||||||||||||||||| Sbjct: 2222 ctagatttcctaagtggtgttgaatcgtttgttcattt---ctgcaattgttaccagacg 2166 Query: 299 tctctcaggtatcttccttccgtctgaaggtttttcacgtaaccctccgtcttggagctg 358 |||||||||||||| |||||| |||||||||||||||| || ||||||| |||||||||| Sbjct: 2165 tctctcaggtatctcccttccatctgaaggtttttcacatagccctccgccttggagctg 2106 Query: 359 tccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatg 418 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2105 tccagagatccctgctcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatg 2046 Query: 419 cccttggcatcgccgcagacatacacatagccaccctgggaaactatgctccatagatct 478 |||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| || ||| Sbjct: 2045 cccttggcgtcgccgcagacgtacacatagccgccctgggaaacaatgctccacagctct 1986 Query: 479 gcagccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaaag 538 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 1985 gcagccttctctgccattttatgttggacgtactcctttgtaggaccctcacgagaaaag 1926 Query: 539 gcgacgaccaactcggacagggctccagattcggtaaaagttgttcagctcgtcctcgta 598 |||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||| || Sbjct: 1925 gcgacgaccaactcagacagggctccggattcgg-caaagttgttcagctcatcctcata 1867 Query: 599 tatgaagtccatctggcggtttctgcacccgaagaacaggatggcacggcccagttccac 658 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1866 tatgaagtccatctggcggtttctgcacccgaaaaacaggatggcacggcccagttccac 1807 Query: 659 accagtctcttttaaagctaatctttcctgtaagaagcccctgnaaggtgcaaggc 714 || ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1806 cccggtctcttttaaagctaatctttcctgtaagaagcccctgaaaggtgcaaggc 1751 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/111 (84%), Gaps = 6/111 (5%) Strand = Plus / Minus Query: 58 cagacatcacaaa-caatcgatgaataatcatcctccgttcatcaacaaataatactaca 116 ||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 2416 cagacatcacaaaacaatcgatgaatcgtcatcctctgttcc---acaaataatactaca 2360 Query: 117 tccgtatctggccgg-ggcgtcctatacaacaacaaaaaatcccactacta 166 | ||| || || || || |||||||||||||| |||||||||||||||| Sbjct: 2359 gcagtacctagctggaggtttcctatacaacaac-aaaaatcccactacta 2310
>dbj|AK102060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D09, full insert sequence Length = 2482 Score = 248 bits (125), Expect = 2e-62 Identities = 299/356 (83%), Gaps = 1/356 (0%) Strand = Plus / Minus Query: 357 tgtccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgcca 416 |||||| ||| ||||||||||| || |||||||| || | |||||| || ||||| |||| Sbjct: 2154 tgtccaaagaaccctgttcctgcacaatggtgtgtagtgtgcggtgtacatctcttgcca 2095 Query: 417 tgcccttggcatcgccgcagacatacacatagccaccctgggaaactatgctccatagat 476 ||||||| ||||| || |||||||| | ||| |||||||| |||| |||||||| | | Sbjct: 2094 tgccctttgcatcaccacagacataaatataaccaccctgagaaatgatgctccaaatct 2035 Query: 477 ctgcagccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaa 536 | | ||||||||||||||||||||| || || ||||| |||| ||||||||||||||||| Sbjct: 2034 cgggagccttctctgccattttgtgctgaacatactcctttgaaggaccctcacgagaaa 1975 Query: 537 aggcgacgaccaactcggacagggctccagattcggtaaaagttgttcagctcgtcctcg 596 |||| || | ||| || ||||| || || | || |||| ||||| ||||| ||||| Sbjct: 1974 aggctacaatcaattcagacagcgcaccggtctcaacaaaa-ttgttgagctcatcctca 1916 Query: 597 tatatgaagtccatctggcggtttctgcacccgaagaacaggatggcacggcccagttcc 656 |||||||||||||||| || ||||||||||| ||||| |||| |||| |||| |||||| Sbjct: 1915 tatatgaagtccatctttcgatttctgcacccaaagaataggacggcatggcctagttcc 1856 Query: 657 acaccagtctcttttaaagctaatctttcctgtaagaagcccctgnaaggtgcaag 712 |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 1855 acaccagtctcttttagagctaatctttcctgtaagaagcccctaaaaggtgcaag 1800
>gb|BT018716.1| Zea mays clone EL01N0517E05.d mRNA sequence Length = 1830 Score = 186 bits (94), Expect = 7e-44 Identities = 289/353 (81%), Gaps = 1/353 (0%) Strand = Plus / Minus Query: 357 tgtccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgcca 416 |||||| ||| ||||| ||||| || ||||| || |||| ||| || || ||||| |||| Sbjct: 1373 tgtccatagacccctgctcctggacgatggtatgtagcgtgcgatggacatctctagcca 1314 Query: 417 tgcccttggcatcgccgcagacatacacatagccaccctgggaaactatgctccatagat 476 |||| || || || ||||| ||||| | |||||| ||||| |||| |||||||| || | Sbjct: 1313 tgccttttgcgtcaccgcaaacataaatatagccgccctgagaaatgatgctccaaagct 1254 Query: 477 ctgcagccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaa 536 | |||||||| | ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 1253 cggcagccttttgcgccattttgtgctgaacatactcttttgtaggaccctcacgagaaa 1194 Query: 537 aggcgacgaccaactcggacagggctccagattcggtaaaagttgttcagctcgtcctcg 596 |||| |||| |||||| || ||||| || | || |||| || || ||||| ||||| Sbjct: 1193 aggctacgatcaactcagagagggcaccggcatcaacaaaa-ttattgagctcatcctca 1135 Query: 597 tatatgaagtccatctggcggtttctgcacccgaagaacaggatggcacggcccagttcc 656 |||||||||||||||| || ||||||||||| ||||| |||| ||| ||||||||||| Sbjct: 1134 tatatgaagtccatcttccgatttctgcacccaaagaagaggacagcatggcccagttcc 1075 Query: 657 acaccagtctcttttaaagctaatctttcctgtaagaagcccctgnaaggtgc 709 || | | || ||||||||||| || ||||||||||||||||||| ||||||| Sbjct: 1074 acctctgcctgttttaaagctagtcgttcctgtaagaagcccctgaaaggtgc 1022
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 618 tttctgcacccgaagaacaggatggcacggcccagttccacaccagtctcttttaaagct 677 ||||||||||| ||||| |||| |||| |||| |||||||||||||||||||||| |||| Sbjct: 117786 tttctgcacccaaagaataggacggcatggcctagttccacaccagtctcttttagagct 117845 Query: 678 aatctttcctg 688 ||||||||||| Sbjct: 117846 aatctttcctg 117856 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 483 ccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggc 540 ||||||||||||||||||| || || ||||| |||| ||||||||||||||||||||| Sbjct: 117344 ccttctctgccattttgtgctgaacatactcctttgaaggaccctcacgagaaaaggc 117401 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/103 (83%) Strand = Plus / Plus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||||||||| || |||||||| || | |||||| || ||||| ||||||||||| |||| Sbjct: 117148 cctgttcctgcacaatggtgtgtagtgtgcggtgtacatctcttgccatgccctttgcat 117207 Query: 429 cgccgcagacatacacatagccaccctgggaaactatgctcca 471 | || |||||||| | ||| |||||||| |||| |||||||| Sbjct: 117208 caccacagacataaatataaccaccctgagaaatgatgctcca 117250 Score = 42.1 bits (21), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 685 cctgtaagaagcccctgnaaggtgcaag 712 |||||||||||||||| |||||||||| Sbjct: 117931 cctgtaagaagcccctaaaaggtgcaag 117958
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 618 tttctgcacccgaagaacaggatggcacggcccagttccacaccagtctcttttaaagct 677 ||||||||||| ||||| |||| |||| |||| |||||||||||||||||||||| |||| Sbjct: 21912352 tttctgcacccaaagaataggacggcatggcctagttccacaccagtctcttttagagct 21912411 Query: 678 aatctttcctg 688 ||||||||||| Sbjct: 21912412 aatctttcctg 21912422 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 483 ccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggc 540 ||||||||||||||||||| || || ||||| |||| ||||||||||||||||||||| Sbjct: 21911910 ccttctctgccattttgtgctgaacatactcctttgaaggaccctcacgagaaaaggc 21911967 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/103 (83%) Strand = Plus / Plus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||||||||| || |||||||| || | |||||| || ||||| ||||||||||| |||| Sbjct: 21911714 cctgttcctgcacaatggtgtgtagtgtgcggtgtacatctcttgccatgccctttgcat 21911773 Query: 429 cgccgcagacatacacatagccaccctgggaaactatgctcca 471 | || |||||||| | ||| |||||||| |||| |||||||| Sbjct: 21911774 caccacagacataaatataaccaccctgagaaatgatgctcca 21911816 Score = 42.1 bits (21), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 685 cctgtaagaagcccctgnaaggtgcaag 712 |||||||||||||||| |||||||||| Sbjct: 21912497 cctgtaagaagcccctaaaaggtgcaag 21912524 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aataatactacatccgtatc 124 |||||||||||||||||||| Sbjct: 10466752 aataatactacatccgtatc 10466771
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 618 tttctgcacccgaagaacaggatggcacggcccagttccacaccagtctcttttaaagct 677 ||||||||||| ||||| |||| |||| |||| |||||||||||||||||||||| |||| Sbjct: 43067 tttctgcacccaaagaataggacggcatggcctagttccacaccagtctcttttagagct 43126 Query: 678 aatctttcctg 688 ||||||||||| Sbjct: 43127 aatctttcctg 43137 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 483 ccttctctgccattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggc 540 ||||||||||||||||||| || || ||||| |||| ||||||||||||||||||||| Sbjct: 42625 ccttctctgccattttgtgctgaacatactcctttgaaggaccctcacgagaaaaggc 42682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/103 (83%) Strand = Plus / Plus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||||||||| || |||||||| || | |||||| || ||||| ||||||||||| |||| Sbjct: 42429 cctgttcctgcacaatggtgtgtagtgtgcggtgtacatctcttgccatgccctttgcat 42488 Query: 429 cgccgcagacatacacatagccaccctgggaaactatgctcca 471 | || |||||||| | ||| |||||||| |||| |||||||| Sbjct: 42489 caccacagacataaatataaccaccctgagaaatgatgctcca 42531 Score = 42.1 bits (21), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 685 cctgtaagaagcccctgnaaggtgcaag 712 |||||||||||||||| |||||||||| Sbjct: 43212 cctgtaagaagcccctaaaaggtgcaag 43239
>emb|Z26252.1|VSNFR V.sativa mRNA for NADPH-ferrihemoprotein reductase Length = 2641 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 407 tctctcgccatgcccttggcatcgccgcagacatacacatagccaccctgggaaa 461 ||||| ||||||||||||||||| ||||||||||| | ||| |||||||| |||| Sbjct: 2164 tctctagccatgcccttggcatcaccgcagacataaagataaccaccctgagaaa 2110
>ref|NM_118585.2| Arabidopsis thaliana ATR1 (ARABIDOPSIS CYTOCHROME REDUCTASE) AT4G24520 (ATR1) mRNA, complete cds Length = 2392 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 2088 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 2029 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 2028 caccgcatacata 2016 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 585 agctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1873 agctcatcctcgtatataaagtccatctgtcgatttctacacccaaagaa 1824 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 2166 accagacatctctgaggtatcttccttcggtttgaag 2130
>emb|X66016.1|ATATR1G A.thaliana ATR1 mRNA for NADPH-cytochrome P450 reductase Length = 2199 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 2068 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 2009 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 2008 caccgcatacata 1996 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 585 agctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1853 agctcatcctcgtatataaagtccatctgtcgatttctacacccaaagaa 1804 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 2146 accagacatctctgaggtatcttccttcggtttgaag 2110
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 130939 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 130998 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 130999 caccgcatacata 131011 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 130775 accagacatctctgaggtatcttccttcggtttgaag 130811
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 117971 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 117912 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 117911 caccgcatacata 117899 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 118135 accagacatctctgaggtatcttccttcggtttgaag 118099
>gb|BT008426.1| Arabidopsis thaliana At4g24520 gene, complete cds Length = 2079 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 1999 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 1940 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 1939 caccgcatacata 1927 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 585 agctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1784 agctcatcctcgtatataaagtccatctgtcgatttctacacccaaagaa 1735 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 2077 accagacatctctgaggtatcttccttcggtttgaag 2041
>gb|AY054688.1| Arabidopsis thaliana NADPH-ferrihemoprotein reductase ATR1 (At4g24520; F22K18.280) mRNA, complete cds Length = 2340 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 2088 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 2029 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 2028 caccgcatacata 2016 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 585 agctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1873 agctcatcctcgtatataaagtccatctgtcgatttctacacccaaagaa 1824 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 2166 accagacatctctgaggtatcttccttcggtttgaag 2130
>emb|BX826804.1|CNS0A3Z5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 366 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 89 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 30 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 29 caccgcatacata 17
>emb|BX827429.1|CNS0A2GR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2343 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 2067 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 2008 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 2007 caccgcatacata 1995 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 585 agctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1852 agctcatcctcgtatataaagtccatctgtcgatttctacacccaaagaa 1803 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 291 accagacgtctctcaggtatcttccttccgtctgaag 327 ||||||| ||||| |||||||||||||| || ||||| Sbjct: 2145 accagacatctctgaggtatcttccttcggtttgaag 2109
>gb|AF123610.1|AF123610 Triticum aestivum clone RED1-TA NADPH-cytochrome P450 reductase mRNA, partial cds Length = 2333 Score = 58.0 bits (29), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 666 tcttttaaagctaatctttcctgtaagaagcccctgnaaggtgc 709 ||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 1596 tcttttagagctaatctttcctgcaagaagcccctaaaaggtgc 1553 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 350 ttggagctgtccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacgtct 409 |||||| | |||| ||| ||||||| |||||||| ||||| || | | ||| |||||| Sbjct: 1911 ttggagttatccaaagatccctgtttttgaactattgtgtggagaaccctgtgtacgtct 1852 Query: 410 ctcgccatgcccttggcatc 429 ||||||||||||||||||| Sbjct: 1851 ttcgccatgcccttggcatc 1832
>emb|X93080.1|ATCER2GEN A.thaliana CER2 gene Length = 2624 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 369 cctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggcat 428 |||| |||||||| |||||||| || | ||||| ||||| |||||||||||||| |||| Sbjct: 2440 cctgctcctgaacaatggtgtgtagagttcggtggacgtccctcgccatgcccttagcat 2499 Query: 429 cgccgcagacata 441 | ||||| ||||| Sbjct: 2500 caccgcatacata 2512
>ref|XM_507177.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0070J06.25 mRNA Length = 2298 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 580 tgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||| ||||| || ||||||||||||| || ||||||||| || ||||| Sbjct: 1667 tgttcagctcatcctcatagatgaagtccatcttgctgtttctgcatccaaagaa 1613
>ref|XM_480935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2298 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 580 tgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||| ||||| || ||||||||||||| || ||||||||| || ||||| Sbjct: 1667 tgttcagctcatcctcatagatgaagtccatcttgctgtttctgcatccaaagaa 1613
>dbj|AK101320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E03, full insert sequence Length = 1714 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 580 tgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||| ||||| || ||||||||||||| || ||||||||| || ||||| Sbjct: 1152 tgttcagctcatcctcatagatgaagtccatcttgctgtttctgcatccaaagaa 1098
>dbj|AK099083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A08, full insert sequence Length = 2298 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 580 tgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||| ||||| || ||||||||||||| || ||||||||| || ||||| Sbjct: 1667 tgttcagctcatcctcatagatgaagtccatcttgctgtttctgcatccaaagaa 1613
>dbj|AK068915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001C12, full insert sequence Length = 2298 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 580 tgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||| ||||| || ||||||||||||| || ||||||||| || ||||| Sbjct: 1667 tgttcagctcatcctcatagatgaagtccatcttgctgtttctgcatccaaagaa 1613
>gb|U67186.1|ECU67186 Eschscholtzia californica NADPH:ferrihemoprotein oxidoreductase mRNA, complete cds Length = 2561 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 347 gtcttggagctgtccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacg 406 ||||| ||| |||||| ||| ||||||||||| | |||||||| || | || || ||| Sbjct: 2186 gtcttcgagttgtccaaagatccctgttcctgggcaatggtgtggagagttcgatgtacg 2127 Query: 407 tctctcgccatgcccttggcatc 429 ||||| ||||||||||||||||| Sbjct: 2126 tctctagccatgcccttggcatc 2104
>gb|AY520902.1| Hypericum androsaemum NADPH:cytochrome P450-reductase mRNA, complete cds Length = 2059 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 368 ccctgttcctgaactatggtgtgcagcgcgcggtgcacgtctctcgccatgcccttggca 427 ||||| |||||||| |||||||||| | ||||| || ||||| ||||| || |||||| Sbjct: 1979 ccctgctcctgaacaatggtgtgcaaggtccggtgaacatctctggccatacctttggca 1920 Query: 428 tcgccgcagacata 441 ||||| |||||||| Sbjct: 1919 tcgccacagacata 1906
>gb|AF024635.1|AF024635 Petroselinum crispum NADPH cytochrome P450 reductase (CPR1) mRNA, complete cds Length = 2556 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 gtgcacgtctctcgccatgcccttggcatcgccgcagacata 441 |||||||||||| |||||||| |||||||| || |||||||| Sbjct: 2035 gtgcacgtctctggccatgcctttggcatcaccacagacata 1994
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 493 cattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggcgacgaccaactc 552 ||||||||| || ||||| || || ||||| ||||||||||| ||||||| |||| ||| Sbjct: 8758095 cattttgtgctgcacgtattccttcgtagggccctcacgagagaaggcgagaaccagctc 8758036 Query: 553 ggaca 557 ||||| Sbjct: 8758035 ggaca 8758031
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 493 cattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggcgacgaccaactc 552 ||||||||| || ||||| || || ||||| ||||||||||| ||||||| |||| ||| Sbjct: 35844 cattttgtgctgcacgtattccttcgtagggccctcacgagagaaggcgagaaccagctc 35785 Query: 553 ggaca 557 ||||| Sbjct: 35784 ggaca 35780
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 493 cattttgtgttggacgtactcttttgtaggaccctcacgagaaaaggcgacgaccaactc 552 ||||||||| || ||||| || || ||||| ||||||||||| ||||||| |||| ||| Sbjct: 101074 cattttgtgctgcacgtattccttcgtagggccctcacgagagaaggcgagaaccagctc 101015 Query: 553 ggaca 557 ||||| Sbjct: 101014 ggaca 101010
>ref|XM_474161.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2088 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 350 ttggagctgtccagagagccctgttcctgaactatggtgtgcagcgcgcggtgcacgtct 409 |||||||| |||| ||| ||||| || ||||| || || || || || | ||| |||||| Sbjct: 2027 ttggagctatccaaagatccctgctcttgaacaattgtatgaagagctctgtgtacgtct 1968 Query: 410 ctcgccatgcccttggcatcgccgcagacata 441 || ||||| ||||||||||| ||||| ||||| Sbjct: 1967 cttgccatacccttggcatcaccgcacacata 1936 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 647 gcccagttccacaccagtctcttttaaagctaatctttcctgtaagaagcc 697 ||||||||| || |||| | ||||| ||||||||||||||| |||||||| Sbjct: 1731 gcccagttcaactccagattgttttagagctaatctttcctgcaagaagcc 1681
>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three novel genes, and the 5' end of the COL5A1 gene for collagen (type V) alpha 1, and a CpG island, complete sequence Length = 173415 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 gaaatcgaagccgcatttctcat 220 ||||||||||||||||||||||| Sbjct: 128973 gaaatcgaagccgcatttctcat 128951
>emb|Z49767.3|PM14CPR Pseudotsuga menziesii mRNA for NADPH-cytochrome P450 reductase (CPR1 gene) Length = 2631 Score = 44.1 bits (22), Expect = 0.63 Identities = 46/54 (85%) Strand = Plus / Minus Query: 400 gtgcacgtctctcgccatgcccttggcatcgccgcagacatacacatagccacc 453 |||||| || || ||||||||||||||||| || || ||||| | ||||||||| Sbjct: 2186 gtgcacatccctagccatgcccttggcatcaccacatacatagagatagccacc 2133
>emb|Z26250.1|HTU2NFR H.tuberosus mRNA for NADPH-ferrihemoprotein reductase Length = 1863 Score = 44.1 bits (22), Expect = 0.63 Identities = 52/62 (83%) Strand = Plus / Minus Query: 575 aaagttgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaagaa 634 |||||||||||| || | ||| |||||||| |||| | ||||||||||| |||||||| Sbjct: 1482 aaagttgttcagttcattctcatatatgaaatccactttacggtttctgcaaccgaagaa 1423 Query: 635 ca 636 || Sbjct: 1422 ca 1421
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 acgtctctcgccatgcccttggcatcgccgcagacata 441 |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 141399 acgtctcttgccatacccttggcatcaccgcacacata 141362
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 acgtctctcgccatgcccttggcatcgccgcagacata 441 |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 15017 acgtctcttgccatacccttggcatcaccgcacacata 14980
>emb|AJ132538.1|PAB132538 Picea abies mRNA for NADPH-cytochrome P450 reductase, partial Length = 1078 Score = 44.1 bits (22), Expect = 0.63 Identities = 46/54 (85%) Strand = Plus / Minus Query: 400 gtgcacgtctctcgccatgcccttggcatcgccgcagacatacacatagccacc 453 |||||| || || ||||||||||||||||| || || ||||| | ||||||||| Sbjct: 480 gtgcacatccctagccatgcccttggcatcaccacatacatagagatagccacc 427
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 acgtctctcgccatgcccttggcatcgccgcagacata 441 |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 33369138 acgtctcttgccatacccttggcatcaccgcacacata 33369101
>gb|AY170374.1| Glycine max NADPH:P450 reductase mRNA, complete cds Length = 2633 Score = 44.1 bits (22), Expect = 0.63 Identities = 33/37 (89%) Strand = Plus / Minus Query: 678 aatctttcctgtaagaagcccctgnaaggtgcaaggc 714 |||||||||||||| || |||||| ||||||| |||| Sbjct: 1895 aatctttcctgtaaaaatcccctgaaaggtgccaggc 1859
>ref|XM_991048.1| PREDICTED: Mus musculus hypothetical protein LOC676554 (LOC676554), mRNA Length = 2915 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 atacaacaacaaaaaatccca 160 ||||||||||||||||||||| Sbjct: 210 atacaacaacaaaaaatccca 230
>ref|XM_989715.1| PREDICTED: Mus musculus hypothetical protein LOC667315 (LOC667315), mRNA Length = 2915 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 atacaacaacaaaaaatccca 160 ||||||||||||||||||||| Sbjct: 210 atacaacaacaaaaaatccca 230
>ref|XM_848020.1| PREDICTED: Canis familiaris similar to pancreatic lipase related protein 1 (LOC610501), mRNA Length = 1698 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cacctttatttagctttaatttcag 60 ||||||||||||||||| ||||||| Sbjct: 1064 cacctttatttagctttgatttcag 1088
>gb|DQ269454.2| Stevia rebaudiana NADPH cytochrome P450 reductase mRNA, complete cds Length = 2578 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 575 aaagttgttcagctcgtcctcgtatatgaagtccatctggcggtttctgcacccgaa 631 ||||||||| || ||||| |||||||| || |||| | |||||||||||| ||||| Sbjct: 1993 aaagttgtttagttcgtcttcgtatataaaatccactttgcggtttctgcatccgaa 1937
>emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in linkage group 23, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccact 162 ||||||||||||||||||||| Sbjct: 49056 acaacaacaaaaaatcccact 49036
>gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, complete sequence Length = 150453 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccactacta 166 |||||||||||||| |||||||||| Sbjct: 60767 acaacaacaaaaaaacccactacta 60743
>gb|AC115085.4| Homo sapiens chromosome 17, clone RP11-280F10, complete sequence Length = 163229 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 acaacaacaaaaaatcccactacta 166 |||||||||||||| |||||||||| Sbjct: 30366 acaacaacaaaaaaacccactacta 30390
>dbj|AK164080.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530003E14 product:unclassifiable, full insert sequence Length = 2917 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 atacaacaacaaaaaatccca 160 ||||||||||||||||||||| Sbjct: 2707 atacaacaacaaaaaatccca 2687
>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198525 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 atacaacaacaaaaaatccca 160 ||||||||||||||||||||| Sbjct: 16376 atacaacaacaaaaaatccca 16396
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 gccatgcccttggcatcgccgcaga 437 ||||||| ||||||||||||||||| Sbjct: 5060759 gccatgcgcttggcatcgccgcaga 5060783
>gb|AC153506.4| Mus musculus 10 BAC RP23-99K2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185656 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 atacaacaacaaaaaatccca 160 ||||||||||||||||||||| Sbjct: 106899 atacaacaacaaaaaatccca 106919
>ref|XM_640746.1| Dictyostelium discoideum hypothetical protein (DDB0201677), partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 caacaaaaaatcccactactacaactac 173 ||||||||||||| || ||||||||||| Sbjct: 197 caacaaaaaatccaacaactacaactac 224
>ref|XM_631059.1| Dictyostelium discoideum hypothetical protein (DDB0219465), partial mRNA Length = 3165 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 aaaatcccactactacaactacta 175 ||||| |||||||||||||||||| Sbjct: 1709 aaaattccactactacaactacta 1732
>gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete sequence Length = 254436 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 aacaacaaaaaatcccactactac 167 ||||||||||||| |||||||||| Sbjct: 195174 aacaacaaaaaataccactactac 195151
>gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosome 18, complete sequence Length = 192563 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gagctgtccagagagccctgttcc 376 |||||||||||||||| ||||||| Sbjct: 123558 gagctgtccagagagcactgttcc 123535
>gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome 9, complete sequence Length = 170429 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 121598 acaacaacaaaaaatcccac 121579
>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199422 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 32 tgggcacctttatttagctttaatttca 59 ||||||| |||||| ||||||||||||| Sbjct: 142048 tgggcacgtttattaagctttaatttca 142075
>emb|CT025568.7| Mouse DNA sequence from clone RP23-374L19 on chromosome 9, complete sequence Length = 183916 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 140291 acaacaacaaaaaatcccac 140310
>emb|Z47070.2|CET09B9 Caenorhabditis elegans Cosmid T09B9, complete sequence Length = 35347 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tactacaactactatataac 181 |||||||||||||||||||| Sbjct: 9983 tactacaactactatataac 9964
>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence Length = 178858 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 86000 acaacaacaaaaaatcccac 86019
>gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, complete sequence Length = 182667 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 664 tctcttttaaagctaatctt 683 |||||||||||||||||||| Sbjct: 90784 tctcttttaaagctaatctt 90803
>gb|AF024498.1| Caenorhabditis elegans cosmid F40H7, complete sequence Length = 22795 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tttagctttaatttcagaca 63 |||||||||||||||||||| Sbjct: 11254 tttagctttaatttcagaca 11235
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence Length = 113744 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tatacaacaacaaaaaatcc 158 |||||||||||||||||||| Sbjct: 100217 tatacaacaacaaaaaatcc 100236
>emb|Z84478.1|HS37M3 Human DNA sequence from clone RP1-37M3 on chromosome 22, complete sequence Length = 101877 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 43982 acaacaacaaaaaatcccac 43963
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 aacaacaaaaaatcccacta 163 |||||||||||||||||||| Sbjct: 89572 aacaacaaaaaatcccacta 89591
>emb|AL392103.6| Human DNA sequence from clone RP11-477L16 on chromosome 10 Contains a pseudogene similar to part of nuclease sensitive element binding protein 1 (NSEP1, part of the gene for SEC15 (S. cerevisiae)-like (SEC15L), and one CpG island, complete sequence Length = 125087 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 85116 acaacaacaaaaaatcccac 85097
>emb|AL359977.16| Human DNA sequence from clone RP11-116M11 on chromosome 1 Contains the 5' end of the FAF1 gene for Fas (TNFRSF6) associated factor 1, the 5' end of the CDKN2C gene for cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) and a CpG island, complete sequence Length = 75013 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aaaaaatcccactactacaa 169 |||||||||||||||||||| Sbjct: 28383 aaaaaatcccactactacaa 28402
>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the 5' end of the SLC24A2 gene for solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (NCKX2) and a CpG island, complete sequence Length = 159900 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 115739 acaacaacaaaaaatcccac 115720
>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12 Contains three novel genes, the 3' end of the LHX2 gene for LIM homeobox protein 2 and four CpG islands, complete sequence Length = 221887 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 653 ttccacaccagtctctttta 672 |||||||||||||||||||| Sbjct: 200162 ttccacaccagtctctttta 200143
>emb|AL139276.17| Human DNA sequence from clone RP11-30M20 on chromosome Xq11.2-13.1 Contains a novel pseudogene and a eukaryotic translation initiation factor 4B (EIF4B) pseudogene, complete sequence Length = 83401 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 64153 acaacaacaaaaaatcccac 64134
>emb|CR792449.7| Zebrafish DNA sequence from clone DKEYP-80F12 in linkage group 13, complete sequence Length = 106699 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tacaacaacaaaaaatccca 160 |||||||||||||||||||| Sbjct: 21352 tacaacaacaaaaaatccca 21333
>gb|DQ010921.1| Feline coronavirus strain FIPV 79-1146, complete genome Length = 29147 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 ctgcagccttctctgccattttgt 500 ||||||||| |||||||||||||| Sbjct: 11028 ctgcagcctgctctgccattttgt 11005
>gb|AC069437.24| Homo sapiens 12 BAC RP11-473C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 69110 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccactact 165 |||||||||||||| ||||||||| Sbjct: 44720 acaacaacaaaaaaccccactact 44697
>gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115000 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 5919 acaacaacaaaaaatcccac 5938
>gb|L07843.1|VIRNADPHP4 Vigna radiata NADPH cytochrome P450 mRNA, complete cds Length = 2617 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 407 tctctcgccatgcccttggcatcgccgcagac 438 ||||| ||||||||||||||||| || ||||| Sbjct: 2129 tctctggccatgcccttggcatctccacagac 2098
>gb|AY994055.1| Feline infectious peritonitis virus, complete genome Length = 29355 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 ctgcagccttctctgccattttgt 500 ||||||||| |||||||||||||| Sbjct: 11258 ctgcagcctgctctgccattttgt 11235
>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete sequence Length = 108387 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tcctatacaacaacaaaaaa 155 |||||||||||||||||||| Sbjct: 5901 tcctatacaacaacaaaaaa 5882
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aataatactacatccgtatc 124 |||||||||||||||||||| Sbjct: 34357 aataatactacatccgtatc 34376
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aataatactacatccgtatc 124 |||||||||||||||||||| Sbjct: 67131 aataatactacatccgtatc 67150
>gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, complete sequence Length = 208349 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gagctgtccagagagccctgttcc 376 |||||||||||||||| ||||||| Sbjct: 59779 gagctgtccagagagcactgttcc 59756
>gb|AC153949.3| Mus musculus 10 BAC RP24-366H8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145982 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 tgggcacctttatttagctttaatttca 59 ||||||| |||||| ||||||||||||| Sbjct: 108944 tgggcacgtttattaagctttaatttca 108917
>emb|CT030682.10| Mouse DNA sequence from clone RP23-263O11 on chromosome 14, complete sequence Length = 144072 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccagagagccctgttcctga 379 |||||||||||||||||||| Sbjct: 10665 ccagagagccctgttcctga 10646
>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence Length = 175644 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acaacaacaaaaaatcccac 161 |||||||||||||||||||| Sbjct: 31177 acaacaacaaaaaatcccac 31158
>gb|M11852.1|BLCMA Bunyamwera virus RNA segment M, complete, coding for a polyprotein containing two glycoproteins G1 and G2 and a nonstructural protein NS-M Length = 4458 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaaaatcccactactacaac 170 |||||||||||||||||||| Sbjct: 4264 aaaaatcccactactacaac 4245 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,806,403 Number of Sequences: 3902068 Number of extensions: 5806403 Number of successful extensions: 178517 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 178140 Number of HSP's gapped (non-prelim): 374 length of query: 714 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 691 effective length of database: 17,143,297,704 effective search space: 11846018713464 effective search space used: 11846018713464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)