Clone Name	rbags38e08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK064792.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
2	dbj|AK106682.1| Oryza sativa (japonica cultivar-group) cDNA clon...	418	e-114
3	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	176	5e-41
4	dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D...	176	5e-41
5	gb|AY110285.1| Zea mays CL47158_1 mRNA sequence	101	3e-18
6	gb|AF532620.1| Glycine max hypothetical protein mRNA, complete cds	62	2e-06
7	gb|AC040163.3|AC040163 Homo sapiens chromosome 16 clone RP11-1M1...	44	0.52
8	ref|NM_179336.1| Arabidopsis thaliana unknown protein AT1G15350 ...	42	2.1
9	ref|NM_179337.1| Arabidopsis thaliana unknown protein AT1G15350 ...	42	2.1
10	ref|NM_101404.1| Arabidopsis thaliana unknown protein AT1G15350 ...	42	2.1
11	gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, compl...	42	2.1
12	gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, compl...	42	2.1
13	emb|BX818051.1|CNS0ACLX Arabidopsis thaliana Full-length cDNA Co...	42	2.1
14	gb|AY088679.1| Arabidopsis thaliana clone 9177 mRNA, complete se...	42	2.1
15	gb|BT003089.1| Arabidopsis thaliana At1g15350 gene, complete cds	42	2.1
16	gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, co...	40	8.2
17	ref|XM_508046.1| PREDICTED: Pan troglodytes similar to NHL repea...	40	8.2
18	gb|AY607842.1| Homo sapiens DNA cross-link repair 1A (PSO2 homol...	40	8.2
19	ref|XM_859774.1| PREDICTED: Canis familiaris similar to NHL repe...	40	8.2
20	ref|XM_544027.2| PREDICTED: Canis familiaris similar to NHL repe...	40	8.2
21	ref|XM_859739.1| PREDICTED: Canis familiaris similar to NHL repe...	40	8.2
22	gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, compl...	40	8.2
23	emb|AL592546.7| Human DNA sequence from clone RP11-211N11 on chr...	40	8.2
24	emb|AL353717.13| Human DNA sequence from clone RP11-562M8 on chr...	40	8.2
25	emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on ch...	40	8.2
26	dbj|AK090631.1| Homo sapiens cDNA FLJ33312 fis, clone BNGH420059...	40	8.2
27	emb|CR593205.1| full-length cDNA clone CS0DL007YM24 of B cells (...	40	8.2
28	dbj|AK001102.1| Homo sapiens cDNA FLJ10240 fis, clone HEMBB1000591	40	8.2
29	gb|AC005184.1| Homo sapiens Xp22 bins 45-47 BAC GSHB-665N22 (Gen...	40	8.2
30	dbj|AK080850.1| Mus musculus adult male corpora quadrigemina cDN...	40	8.2
31	dbj|AK002650.1| Mus musculus adult male kidney cDNA, RIKEN full-...	40	8.2
32	gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell ...	40	8.2
33	dbj|AK004564.1| Mus musculus adult male lung cDNA, RIKEN full-le...	40	8.2
34	dbj|AK033384.1| Mus musculus 16 days embryo lung cDNA, RIKEN ful...	40	8.2
35	ref|NM_025811.1| Mus musculus NHL repeat containing 2 (Nhlrc2), ...	40	8.2
36	ref|NM_198514.2| Homo sapiens NHL repeat containing 2 (NHLRC2), ...	40	8.2
37	ref|XM_217640.3| PREDICTED: Rattus norvegicus NHL repeat contain...	40	8.2
38	gb|AC079865.14| Homo sapiens 12 BAC RP11-745I6 (Roswell Park Can...	40	8.2
39	gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, co...	40	8.2
40	gb|BC095956.1| Mus musculus NHL repeat containing 2, mRNA (cDNA ...	40	8.2
41	gb|AC151372.3| Aotus nancymaae clone CH258-368D16, complete sequ...	40	8.2
42	emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on ch...	40	8.2

---

>dbj|AK064792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C11, full
           insert sequence
          Length = 1045

 Score =  426 bits (215), Expect = e-116
 Identities = 371/423 (87%)
 Strand = Plus / Minus

                                                                       
Query: 173 ctaatcatataggccctcctgctcccagccgtccacgaggaaatctaccatttcaccaag 232
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctaatcatataggccttcctgctcccagccgtccacgaggaaatctaccatttcaccaag 749

                                                                       
Query: 233 agggatcggttgtgcaaatgtcttggtgcttcctagcaggctctcatatgtagcattcca 292
           |||||||| ||||| |||||  || ||||||||||| |||||||||||||||||||||||
Sbjct: 748 agggatcgcttgtggaaatggttttgtgcttcctagaaggctctcatatgtagcattcca 689

                                                                       
Query: 293 acctatttttggttcccgggtcttttgacgctgagaattaagccttctgtttccaaccca 352
           || ||||||||| || || |  | |||||||||||||||  |||||||||||||||||||
Sbjct: 688 acttatttttggctctcgaggttgttgacgctgagaattgtgccttctgtttccaaccca 629

                                                                       
Query: 353 ctgctgtctagtctggttccagagtagaagaccttgatttacaaactcatttgggttgct 412
           ||| || |||||||||||||| || ||||| ||||||||||||||||||||||||||| |
Sbjct: 628 ctgttgcctagtctggttccacaggagaagtccttgatttacaaactcatttgggttggt 569

                                                                       
Query: 413 gctacttccagctccatgctgttcactagattgtgctgctgtgctaatggaagacatact 472
           ||||||||||||||||||||| || || ||||||||||| || || || |||||||| ||
Sbjct: 568 gctacttccagctccatgctgatcgctcgattgtgctgccgtactgattgaagacatgct 509

                                                                       
Query: 473 acgctgtgactgcaaggcactgttctccatttcacgtggacttgtactccagaaatcttc 532
           |||||| || |||| |||||| ||||||||| |  | || |||| |||||| || || ||
Sbjct: 508 acgctgagattgcatggcactattctccattcccggcgggcttgaactccaaaagtcctc 449

                                                                       
Query: 533 agacaaactacggtgttttatcgagcgtccttggatccttaaacctttggaaggctcatc 592
            |||||||| || || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 448 cgacaaactccgctgctttattgagcgcccttgaattcttaaaccttttgaaggctcatc 389

              
Query: 593 aac 595
           |||
Sbjct: 388 aac 386

---

>dbj|AK106682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B07, full
           insert sequence
          Length = 2229

 Score =  418 bits (211), Expect = e-114
 Identities = 370/423 (87%)
 Strand = Plus / Minus

                                                                       
Query: 173 ctaatcatataggccctcctgctcccagccgtccacgaggaaatctaccatttcaccaag 232
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ctaatcatataggccttcctgctcccagccgtccacgaggaaatctaccatttcaccaag 723

                                                                       
Query: 233 agggatcggttgtgcaaatgtcttggtgcttcctagcaggctctcatatgtagcattcca 292
           |||||||| ||||| |||||  || ||||||||||| |||||||||||||||||||||||
Sbjct: 722 agggatcgcttgtggaaatggttttgtgcttcctagaaggctctcatatgtagcattcca 663

                                                                       
Query: 293 acctatttttggttcccgggtcttttgacgctgagaattaagccttctgtttccaaccca 352
           || ||||||||| || || |  |  ||||||||||||||  |||||||||||||||||||
Sbjct: 662 acttatttttggctctcgaggttgctgacgctgagaattgtgccttctgtttccaaccca 603

                                                                       
Query: 353 ctgctgtctagtctggttccagagtagaagaccttgatttacaaactcatttgggttgct 412
           ||| || |||||||||||||| || ||||| ||||||||||||||||||||||||||| |
Sbjct: 602 ctgttgcctagtctggttccacaggagaagtccttgatttacaaactcatttgggttggt 543

                                                                       
Query: 413 gctacttccagctccatgctgttcactagattgtgctgctgtgctaatggaagacatact 472
           ||||||||||||||||||||| || || ||||||||||| || || || |||||||| ||
Sbjct: 542 gctacttccagctccatgctgatcgctcgattgtgctgccgtactgattgaagacatgct 483

                                                                       
Query: 473 acgctgtgactgcaaggcactgttctccatttcacgtggacttgtactccagaaatcttc 532
           |||||| || |||| |||||| ||||||||| |  | || |||| |||||| || || ||
Sbjct: 482 acgctgagattgcatggcactattctccattcccggcgggcttgaactccaaaagtcctc 423

                                                                       
Query: 533 agacaaactacggtgttttatcgagcgtccttggatccttaaacctttggaaggctcatc 592
            |||||||| || || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 422 cgacaaactccgctgctttattgagcgcccttgaattcttaaaccttttgaaggctcatc 363

              
Query: 593 aac 595
           |||
Sbjct: 362 aac 360

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  176 bits (89), Expect = 5e-41
 Identities = 182/213 (85%)
 Strand = Plus / Plus

                                                                           
Query: 383     accttgatttacaaactcatttgggttgctgctacttccagctccatgctgttcactaga 442
               |||||||||||||||||||||||||||| |||||||||||||||||||||| || || ||
Sbjct: 5642631 accttgatttacaaactcatttgggttggtgctacttccagctccatgctgatcgctcga 5642690

                                                                           
Query: 443     ttgtgctgctgtgctaatggaagacatactacgctgtgactgcaaggcactgttctccat 502
               ||||||||| || || || |||||||| |||||||| || |||| |||||| ||||||||
Sbjct: 5642691 ttgtgctgccgtactgattgaagacatgctacgctgagattgcatggcactattctccat 5642750

                                                                           
Query: 503     ttcacgtggacttgtactccagaaatcttcagacaaactacggtgttttatcgagcgtcc 562
               | |  | || |||| |||||| || || || |||||||| || || ||||| ||||| ||
Sbjct: 5642751 tcccggcgggcttgaactccaaaagtcctccgacaaactccgctgctttattgagcgccc 5642810

                                                
Query: 563     ttggatccttaaacctttggaaggctcatcaac 595
               ||| || ||||||||||| ||||||||||||||
Sbjct: 5642811 ttgaattcttaaaccttttgaaggctcatcaac 5642843



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                     
Query: 173     ctaatcatataggccctcctgctcccagccgtccacgaggaaatctaccatttc 226
               ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5641017 ctaatcatataggccttcctgctcccagccgtccacgaggaaatctaccatttc 5641070



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                           
Query: 226     caccaagagggatcggttgtgcaaatgtcttggtgcttcctagcaggctctcatatgtag 285
               ||||||||||||||| ||||| |||||  || ||||||||||| ||||||||||||||||
Sbjct: 5641166 caccaagagggatcgcttgtggaaatggttttgtgcttcctagaaggctctcatatgtag 5641225

                        
Query: 286     cattccaac 294
               |||||||||
Sbjct: 5641226 cattccaac 5641234



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                           
Query: 317     ttgacgctgagaattaagccttctgtttccaacccactgctgtctagtctggttccagag 376
               |||||||||||||||  |||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 5641941 ttgacgctgagaattgtgccttctgtttccaacccactgttgcctagtctggttccacag 5642000

                     
Query: 377     tagaag 382
                |||||
Sbjct: 5642001 gagaag 5642006

---

>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score =  176 bits (89), Expect = 5e-41
 Identities = 182/213 (85%)
 Strand = Plus / Plus

                                                                         
Query: 383   accttgatttacaaactcatttgggttgctgctacttccagctccatgctgttcactaga 442
             |||||||||||||||||||||||||||| |||||||||||||||||||||| || || ||
Sbjct: 70367 accttgatttacaaactcatttgggttggtgctacttccagctccatgctgatcgctcga 70426

                                                                         
Query: 443   ttgtgctgctgtgctaatggaagacatactacgctgtgactgcaaggcactgttctccat 502
             ||||||||| || || || |||||||| |||||||| || |||| |||||| ||||||||
Sbjct: 70427 ttgtgctgccgtactgattgaagacatgctacgctgagattgcatggcactattctccat 70486

                                                                         
Query: 503   ttcacgtggacttgtactccagaaatcttcagacaaactacggtgttttatcgagcgtcc 562
             | |  | || |||| |||||| || || || |||||||| || || ||||| ||||| ||
Sbjct: 70487 tcccggcgggcttgaactccaaaagtcctccgacaaactccgctgctttattgagcgccc 70546

                                              
Query: 563   ttggatccttaaacctttggaaggctcatcaac 595
             ||| || ||||||||||| ||||||||||||||
Sbjct: 70547 ttgaattcttaaaccttttgaaggctcatcaac 70579



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                   
Query: 173   ctaatcatataggccctcctgctcccagccgtccacgaggaaatctaccatttc 226
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 68753 ctaatcatataggccttcctgctcccagccgtccacgaggaaatctaccatttc 68806



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 226   caccaagagggatcggttgtgcaaatgtcttggtgcttcctagcaggctctcatatgtag 285
             ||||||||||||||| ||||| |||||  || ||||||||||| ||||||||||||||||
Sbjct: 68902 caccaagagggatcgcttgtggaaatggttttgtgcttcctagaaggctctcatatgtag 68961

                      
Query: 286   cattccaac 294
             |||||||||
Sbjct: 68962 cattccaac 68970



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 317   ttgacgctgagaattaagccttctgtttccaacccactgctgtctagtctggttccagag 376
             |||||||||||||||  |||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 69677 ttgacgctgagaattgtgccttctgtttccaacccactgttgcctagtctggttccacag 69736

                   
Query: 377   tagaag 382
              |||||
Sbjct: 69737 gagaag 69742

---

>gb|AY110285.1| Zea mays CL47158_1 mRNA sequence
          Length = 860

 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                       
Query: 343 ttccaacccactgctgtctagtctggttccagagtagaagaccttgatttacaaactcat 402
           ||||||||||||| ||||| |||||||||||||| | |||||||||||| | ||||||||
Sbjct: 379 ttccaacccactgttgtctggtctggttccagagcataagaccttgattcataaactcat 438

                              
Query: 403 ttgggttgctgctacttcc 421
           | |||||||||||||||||
Sbjct: 439 tcgggttgctgctacttcc 457



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 91/108 (84%)
 Strand = Plus / Plus

                                                                       
Query: 173 ctaatcatataggccctcctgctcccagccgtccacgaggaaatctaccatttcaccaag 232
           ||||||||| ||||| || ||||||||  ||||||| || |||||||||||||| |||||
Sbjct: 209 ctaatcataaaggccttcttgctcccaagcgtccacaagcaaatctaccatttcgccaag 268

                                                           
Query: 233 agggatcggttgtgcaaatgtcttggtgcttcctagcaggctctcata 280
           ||| |||||||| |  |||| |||  ||||||||||||| || |||||
Sbjct: 269 aggtatcggttgggagaatggcttattgcttcctagcagactttcata 316

---

>gb|AF532620.1| Glycine max hypothetical protein mRNA, complete cds
          Length = 918

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 180 tataggccctcctgctcccagccgtccacgaggaaatctaccatttcaccaagagggat 238
           |||||||| |||||||||||   |||||| || ||||||||||||||| ||||||||||
Sbjct: 676 tataggccatcctgctcccatatgtccacaagaaaatctaccatttcagcaagagggat 618

---

>gb|AC040163.3|AC040163 Homo sapiens chromosome 16 clone RP11-1M1, complete sequence
          Length = 176845

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 13    aaaaatatgttacatttgcttcaaaa 38
             ||||||||||||||||||||| ||||
Sbjct: 90997 aaaaatatgttacatttgcttaaaaa 90972

---

>ref|NM_179336.1| Arabidopsis thaliana unknown protein AT1G15350 transcript variant
           AT1G15350.2 mRNA, complete cds
          Length = 900

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 517 gtctgattccaaagaagaagaccttgatttaca 485

---

>ref|NM_179337.1| Arabidopsis thaliana unknown protein AT1G15350 transcript variant
           AT1G15350.3 mRNA, complete cds
          Length = 911

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 528 gtctgattccaaagaagaagaccttgatttaca 496

---

>ref|NM_101404.1| Arabidopsis thaliana unknown protein AT1G15350 transcript variant
           AT1G15350.1 mRNA, complete cds
          Length = 964

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 554 gtctgattccaaagaagaagaccttgatttaca 522

---

>gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, complete sequence
          Length = 190346

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 151    ccaccaccctttaattaagcagcta 175
              |||||||||||||||||| ||||||
Sbjct: 162257 ccaccaccctttaattaaacagcta 162281

---

>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence
          Length = 183521

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    gtagcattccaacctattttt 302
              |||||||||||||||||||||
Sbjct: 124097 gtagcattccaacctattttt 124117

---

>emb|BX818051.1|CNS0ACLX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZG01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 924

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 556 gtctgattccaaagaagaagaccttgatttaca 524

---

>gb|AY088679.1| Arabidopsis thaliana clone 9177 mRNA, complete sequence
          Length = 964

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 554 gtctgattccaaagaagaagaccttgatttaca 522

---

>gb|BT003089.1| Arabidopsis thaliana At1g15350 gene, complete cds
          Length = 327

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 363 gtctggttccagagtagaagaccttgatttaca 395
           ||||| ||||| || ||||||||||||||||||
Sbjct: 134 gtctgattccaaagaagaagaccttgatttaca 102

---

>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence
          Length = 156084

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    tcctgctcccagccgtccac 208
              ||||||||||||||||||||
Sbjct: 128171 tcctgctcccagccgtccac 128152

---

>ref|XM_508046.1| PREDICTED: Pan troglodytes similar to NHL repeat containing 2;
           Similar to RIKEN cDNA 1200003G01 gene; 1200003G01Rik
           (LOC450748), mRNA
          Length = 526

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 180 tcctgctcccagccgtccac 161

---

>gb|AY607842.1| Homo sapiens DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)
            (DCLRE1A) gene, complete cds
          Length = 23104

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  tcctgctcccagccgtccac 208
            ||||||||||||||||||||
Sbjct: 1076 tcctgctcccagccgtccac 1095

---

>ref|XM_859774.1| PREDICTED: Canis familiaris similar to NHL repeat containing 2,
           transcript variant 3 (LOC486897), mRNA
          Length = 2259

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 176 tcctgctcccagccgtccac 157

---

>ref|XM_544027.2| PREDICTED: Canis familiaris similar to NHL repeat containing 2,
           transcript variant 1 (LOC486897), mRNA
          Length = 2205

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 176 tcctgctcccagccgtccac 157

---

>ref|XM_859739.1| PREDICTED: Canis familiaris similar to NHL repeat containing 2,
           transcript variant 2 (LOC486897), mRNA
          Length = 521

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 176 tcctgctcccagccgtccac 157

---

>gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, complete sequence
          Length = 201188

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    tccaacctatttttggttcc 308
              ||||||||||||||||||||
Sbjct: 113057 tccaacctatttttggttcc 113076

---

>emb|AL592546.7| Human DNA sequence from clone RP11-211N11 on chromosome 10 Contains the
             3' end of the CASP7 gene for caspase 7 apoptosis-related
             cysteine protease, a novel gene (FLJ23537), the DCLRE1A
             gene for DNA cross-link repair 1A (PSO2 homolog S.
             cerevisiae), the 5' end of the gene for a novel NHL repeat
             domain containing protein (FLJ33312), a novel gene and a
             CpG island, complete sequence
          Length = 174776

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   tcctgctcccagccgtccac 208
             ||||||||||||||||||||
Sbjct: 19559 tcctgctcccagccgtccac 19578

---

>emb|AL353717.13| Human DNA sequence from clone RP11-562M8 on chromosome 9 Contains a
             novel pseudogene, a argininosuccinate synthetase (ASS)
             (CTLN1) pseudogene, the APTX gene for aprataxin, a
             transcription elongation factor A (SII), 1 pseudogene
             (GTF2SP) (TCEA1P) and 2 CpG islands, complete sequence
          Length = 120533

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    ataatccacattcatcacccacac 90
             |||||||||||||||||| |||||
Sbjct: 35953 ataatccacattcatcacacacac 35976

---

>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the
              3' end of the Acac gene for acetyl-Coenzyme A carboxylase,
              complete sequence
          Length = 187803

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 254    cttggtgcttcctagcaggctctc 277
              |||||| |||||||||||||||||
Sbjct: 129550 cttggtccttcctagcaggctctc 129527

---

>dbj|AK090631.1| Homo sapiens cDNA FLJ33312 fis, clone BNGH42005968, weakly similar
           to DIPZ PROTEIN
          Length = 2550

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 364 tcctgctcccagccgtccac 345

---

>emb|CR593205.1| full-length cDNA clone CS0DL007YM24 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 2336

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 152 tcctgctcccagccgtccac 133

---

>dbj|AK001102.1| Homo sapiens cDNA FLJ10240 fis, clone HEMBB1000591
          Length = 1712

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 17   atatgttacatttgcttcaaaagaaaaa 44
            |||||||||||||| |||||| ||||||
Sbjct: 1379 atatgttacatttgattcaaaggaaaaa 1352

---

>gb|AC005184.1| Homo sapiens Xp22 bins 45-47 BAC GSHB-665N22 (Genome Systems Human BAC
             Library) complete sequence
          Length = 157981

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 17    atatgttacatttgcttcaaaagaaaaa 44
             |||||||||||||| |||||| ||||||
Sbjct: 62413 atatgttacatttgattcaaaggaaaaa 62386

---

>dbj|AK080850.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230377N03 product:hypothetical
            protein, full insert sequence
          Length = 1853

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 289  tccaacctatttttggttcc 308
            ||||||||||||||||||||
Sbjct: 1523 tccaacctatttttggttcc 1504

---

>dbj|AK002650.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610020B15 product:hypothetical NHL
           repeat containing protein, full insert sequence
          Length = 2315

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 159 tcctgctcccagccgtccac 140

---

>gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162063

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     ataatccacattcatcacccacac 90
              |||||||||||||||||| |||||
Sbjct: 150662 ataatccacattcatcacacacac 150685

---

>dbj|AK004564.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200003G01 product:hypothetical NHL
           repeat containing protein, full insert sequence
          Length = 3557

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 221 tcctgctcccagccgtccac 202

---

>dbj|AK033384.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:8430420D24 product:hypothetical
           Thioredoxin/NHL repeat containing protein, full insert
           sequence
          Length = 3936

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 575 tcctgctcccagccgtccac 556

---

>ref|NM_025811.1| Mus musculus NHL repeat containing 2 (Nhlrc2), mRNA
          Length = 3936

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 575 tcctgctcccagccgtccac 556

---

>ref|NM_198514.2| Homo sapiens NHL repeat containing 2 (NHLRC2), mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 364 tcctgctcccagccgtccac 345

---

>ref|XM_217640.3| PREDICTED: Rattus norvegicus NHL repeat containing 2 (predicted)
           (Nhlrc2_predicted), mRNA
          Length = 2181

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 155 tcctgctcccagccgtccac 136

---

>gb|AC079865.14| Homo sapiens 12 BAC RP11-745I6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163494

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 483   tgcaaggcactgttctccat 502
             ||||||||||||||||||||
Sbjct: 17488 tgcaaggcactgttctccat 17507

---

>gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, complete sequence
          Length = 168486

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  tcctgctcccagccgtccac 208
            ||||||||||||||||||||
Sbjct: 3649 tcctgctcccagccgtccac 3630

---

>gb|BC095956.1| Mus musculus NHL repeat containing 2, mRNA (cDNA clone MGC:106284
           IMAGE:5330002), complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 tcctgctcccagccgtccac 208
           ||||||||||||||||||||
Sbjct: 518 tcctgctcccagccgtccac 499

---

>gb|AC151372.3| Aotus nancymaae clone CH258-368D16, complete sequence
          Length = 139897

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   attgtgctgctgtgctaatg 461
             ||||||||||||||||||||
Sbjct: 19135 attgtgctgctgtgctaatg 19116

---

>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete
             sequence
          Length = 207495

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tacatttgcttcaaaagaaa 42
             ||||||||||||||||||||
Sbjct: 36562 tacatttgcttcaaaagaaa 36543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,098,137
Number of Sequences: 3902068
Number of extensions: 6098137
Number of successful extensions: 105151
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105043
Number of HSP's gapped (non-prelim): 106
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---