Clone Name	rbags37p01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK061740.1| Oryza sativa (japonica cultivar-group) cDNA clon...	153	5e-34
2	dbj|AK059383.1| Oryza sativa (japonica cultivar-group) cDNA clon...	153	5e-34
3	gb|AY104662.1| Zea mays PCO106630 mRNA sequence	147	3e-32
4	ref|XM_464768.1| Oryza sativa (japonica cultivar-group), mRNA	139	7e-30
5	dbj|AK058248.1| Oryza sativa (japonica cultivar-group) cDNA clon...	139	7e-30
6	ref|NM_191823.1| Oryza sativa (japonica cultivar-group), predic...	131	2e-27
7	dbj|AK122140.1| Oryza sativa (japonica cultivar-group) cDNA clon...	131	2e-27
8	dbj|AK063794.1| Oryza sativa (japonica cultivar-group) cDNA clon...	131	2e-27
9	gb|BT017800.1| Zea mays clone EL01N0506B01.c mRNA sequence	127	3e-26
10	gb|AF298769.1|AF298769 Zea mays 40S ribosomal protein S24 mRNA, ...	127	3e-26
11	gb|AY103563.1| Zea mays PCO066882 mRNA sequence	127	3e-26
12	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	119	7e-24
13	dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic D...	119	7e-24
14	gb|AY108428.1| Zea mays PCO105386 mRNA sequence	111	2e-21
15	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	109	6e-21
16	dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic D...	109	6e-21
17	dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D...	109	6e-21
18	gb|AY106030.1| Zea mays PCO144919 mRNA sequence	105	1e-19
19	gb|AY086740.1| Arabidopsis thaliana clone 27178 mRNA, complete s...	103	4e-19
20	ref|NM_122689.2| Arabidopsis thaliana structural constituent of ...	96	1e-16
21	gb|BT018027.1| Zea mays clone EL01N0529G08.c mRNA sequence	96	1e-16
22	gb|AY072478.1| Arabidopsis thaliana unknown protein mRNA, comple...	96	1e-16
23	gb|AF386992.1|AF386992 Arabidopsis thaliana Unknown protein mRNA...	96	1e-16
24	ref|NM_111364.2| Arabidopsis thaliana structural constituent of ...	80	6e-12
25	gb|AY094044.1| Arabidopsis thaliana AT3g04920/T9J14_13 mRNA, com...	80	6e-12
26	gb|AY093332.1| Arabidopsis thaliana putative ribosomal protein s...	80	6e-12
27	gb|AY062671.1| Arabidopsis thaliana putative ribosomal protein (...	80	6e-12
28	gb|AY050364.1| Arabidopsis thaliana AT3g04920/T9J14_13 mRNA, com...	80	6e-12
29	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	80	6e-12
30	emb|BX825848.1|CNS0A57X Arabidopsis thaliana Full-length cDNA Co...	80	6e-12
31	dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic D...	80	6e-12
32	dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D...	80	6e-12
33	gb|AY086479.1| Arabidopsis thaliana clone 25350 mRNA, complete s...	80	6e-12
34	gb|BT014030.1| Lycopersicon esculentum clone 133092F, mRNA sequence	72	1e-09
35	dbj|AP004938.1| Lotus japonicus genomic DNA, chromosome 5, clone...	72	1e-09
36	gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana...	62	1e-06
37	dbj|AP006365.1| Lotus japonicus genomic DNA, chromosome 1, clone...	58	2e-05
38	ref|XM_753569.1| Ustilago maydis 521 hypothetical protein (UM025...	54	3e-04
39	gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J...	52	0.001
40	ref|NM_009807.2| Mus musculus caspase 1 (Casp1), mRNA	50	0.005
41	gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, com...	50	0.005
42	gb|BC008152.1| Mus musculus caspase 1, mRNA (cDNA clone MGC:6106...	50	0.005
43	gb|AC135565.18| Medicago truncatula clone mth2-19b12, complete s...	50	0.005
44	dbj|AK132826.1| Mus musculus adult male testis cDNA, RIKEN full-...	50	0.005
45	dbj|AK163069.1| Mus musculus adult male aorta and vein cDNA, RIK...	50	0.005
46	gb|AC141637.3| Mus musculus BAC clone RP23-424D5 from 9, complet...	50	0.005
47	gb|U04269.1|MMU04269 Mus musculus 129 interleukin-1 beta convert...	50	0.005
48	gb|L03799.1|MUSILBC Mouse interleukin-1 beta convertase (IL-1bc)...	50	0.005
49	gb|L28095.1|MUSIL1B Mouse interleukin 1-beta converting enzyme, ...	50	0.005
50	emb|AL645603.12| Mouse DNA sequence from clone RP23-299L18 on ch...	44	0.32
51	gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a...	44	0.32
52	gb|AC164524.5| Mus musculus BAC RP23-438F8 (Roswell Park Cancer...	42	1.3
53	gb|AC148709.1| Macaca mulatta Major Histocompatibility Complex B...	42	1.3
54	gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex B...	42	1.3
55	gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex B...	42	1.3
56	gb|AC148695.1| Macaca mulatta Major Histocompatibility Complex B...	42	1.3
57	gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex B...	42	1.3
58	dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia...	42	1.3
59	gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Canc...	42	1.3
60	dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
61	gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequ...	42	1.3
62	gb|AC140395.2| Mus musculus BAC clone RP24-183G4 from chromosome...	40	5.0
63	gb|AC133124.3| Homo sapiens 3 BAC RP11-312A19 (Roswell Park Canc...	40	5.0
64	gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete...	40	5.0
65	emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chrom...	40	5.0
66	gb|AC011676.10| Homo sapiens chromosome , clone RP11-10J21, comp...	40	5.0
67	gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, com...	40	5.0
68	emb|AL035087.20|HS626B19 Human DNA sequence from clone RP4-626B1...	40	5.0
69	gb|AC166262.3| Mus musculus BAC RP23-256D10 (Roswell Park Cance...	40	5.0
70	emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in l...	40	5.0
71	emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, ...	40	5.0
72	dbj|AK123283.1| Homo sapiens cDNA FLJ41289 fis, clone BRAMY2038846	40	5.0
73	gb|AC067836.6| Homo sapiens chromosome 8, clone RP11-785H20, com...	40	5.0
74	gb|AC037486.4| Homo sapiens chromosome 8, clone RP11-398G24, com...	40	5.0
75	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.0
76	gb|AC096729.3| Homo sapiens BAC clone RP11-63M2 from 4, complete...	40	5.0
77	gb|AC133436.2| Homo sapiens 3 BAC RP13-486I7 (Roswell Park Cance...	40	5.0
78	gb|AC137833.3| Homo sapiens 3 BAC RP13-961N1 (Roswell Park Cance...	40	5.0
79	emb|BX005434.6| Zebrafish DNA sequence from clone DKEY-106M21, c...	40	5.0
80	emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, ...	40	5.0
81	dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D...	40	5.0
82	dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D...	40	5.0
83	gb|AY620614.1| Pithecia pithecia pithecia Alu insertion locus La...	40	5.0
84	gb|AY620613.1| Saimiri sciureus sciureus Alu insertion locus Lag...	40	5.0
85	gb|AY620611.1| Alouatta sara Alu insertion locus Lago_H05_Alouat...	40	5.0
86	gb|AY620610.1| Ateles geoffroyi Alu insertion locus Lago_H05_Ate...	40	5.0
87	gb|AY620609.1| Saguinus labiatus Alu insertion locus Lago_H05_Sa...	40	5.0
88	gb|AY620608.1| Aotus trivirgatus Alu insertion locus Lago_H05_Ao...	40	5.0
89	gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete...	40	5.0
90	gb|AC153542.4| Mus musculus 10 BAC RP23-463O2 (Roswell Park Canc...	40	5.0
91	gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, co...	40	5.0
92	emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on ch...	40	5.0

---

>dbj|AK061740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E11, full
           insert sequence
          Length = 1437

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 222 gcatctccggccttggtcttcttcacaccacggatcttctttgttctgttcttcctttcc 281
           |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 495 gcatctccagcctttgtcttcttcacaccacggatcttctttgctctgttcttccgttcc 436

                                                                
Query: 282 ttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgag 334
           || |||||||| ||||||||||||||||| || |||||||| |||||||||||
Sbjct: 435 ttcatctgcttacgtgacttctctaccttagtggcaagaccattcctgatgag 383



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 94  acataaatggcaaagtcttttctagtcataattaagcactcagcaacattggcaca 149
           |||||| ||||||| | ||||||||| ||||||||||| |||| || |||| ||||
Sbjct: 636 acataagtggcaaaat-ttttctagttataattaagcattcagtaatattgccaca 582

---

>dbj|AK059383.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G06, full
           insert sequence
          Length = 585

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 222 gcatctccggccttggtcttcttcacaccacggatcttctttgttctgttcttcctttcc 281
           |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 334 gcatctccagcctttgtcttcttcacaccacggatcttctttgctctgttcttccgttcc 275

                                                                
Query: 282 ttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgag 334
           || |||||||| ||||||||||||||||| || |||||||| |||||||||||
Sbjct: 274 ttcatctgcttacgtgacttctctaccttagtggcaagaccattcctgatgag 222



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 94  acataaatggcaaagtcttttctagtcataattaagcactcagcaacattggcaca 149
           |||||| ||||||| | ||||||||| ||||||||||| |||| || |||| ||||
Sbjct: 475 acataagtggcaaaat-ttttctagttataattaagcattcagtaatattgccaca 421

---

>gb|AY104662.1| Zea mays PCO106630 mRNA sequence
          Length = 722

 Score =  147 bits (74), Expect = 3e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                       
Query: 206 tgcttatttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgt 265
           |||| ||||||||||||| || || ||||| |||||||||||||| ||||||||||| | 
Sbjct: 479 tgctcatttcttcttggcgtccccagcctttgtcttcttcacaccgcggatcttcttcgc 420

                                                                       
Query: 266 tctgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgtt 325
            ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 419 cctgttcttcctctccttcatctgcttgcgcgacttctccaccttggtagcaagaccgtt 360

                 
Query: 326 cctgat 331
           ||||||
Sbjct: 359 cctgat 354

---

>ref|XM_464768.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 719

 Score =  139 bits (70), Expect = 7e-30
 Identities = 117/132 (88%), Gaps = 3/132 (2%)
 Strand = Plus / Minus

                                                                       
Query: 206 tgcttatttcttcttg---gcatctccggccttggtcttcttcacaccacggatcttctt 262
           |||||| |||||||||   |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 514 tgcttacttcttcttgcctgcatctccagcctttgtcttcttcacaccacggatcttctt 455

                                                                       
Query: 263 tgttctgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagacc 322
           || |||||||||||| ||||| ||||||||||| |||||||| |||||||| || || ||
Sbjct: 454 tgctctgttcttcctctccttcatctgcttgcgagacttctcaaccttggtggcgaggcc 395

                       
Query: 323 gttcctgatgag 334
            |||||||||||
Sbjct: 394 attcctgatgag 383

---

>dbj|AK058248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-B05, full
           insert sequence
          Length = 719

 Score =  139 bits (70), Expect = 7e-30
 Identities = 117/132 (88%), Gaps = 3/132 (2%)
 Strand = Plus / Minus

                                                                       
Query: 206 tgcttatttcttcttg---gcatctccggccttggtcttcttcacaccacggatcttctt 262
           |||||| |||||||||   |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 514 tgcttacttcttcttgcctgcatctccagcctttgtcttcttcacaccacggatcttctt 455

                                                                       
Query: 263 tgttctgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagacc 322
           || |||||||||||| ||||| ||||||||||| |||||||| |||||||| || || ||
Sbjct: 454 tgctctgttcttcctctccttcatctgcttgcgagacttctcaaccttggtggcgaggcc 395

                       
Query: 323 gttcctgatgag 334
            |||||||||||
Sbjct: 394 attcctgatgag 383

---

>ref|NM_191823.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 417

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Minus

                                                                       
Query: 221 ggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttcttcctttc 280
           |||||| || |||||||||||||| ||||||||||||||||| | ||||||||| | |||
Sbjct: 402 ggcatcaccagccttggtcttcttgacaccacggatcttcttagctctgttcttgcgttc 343

                                                                       
Query: 281 cttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgaggcggta 340
            || || |||||||| || ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 342 tttcatttgcttgcgagatttctcaaccttggtagcaagaccattcctgatgaggcggta 283

             
Query: 341 ct 342
           ||
Sbjct: 282 ct 281

---

>dbj|AK122140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136G18, full
           insert sequence
          Length = 762

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Minus

                                                                       
Query: 221 ggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttcttcctttc 280
           |||||| || |||||||||||||| ||||||||||||||||| | ||||||||| | |||
Sbjct: 490 ggcatcaccagccttggtcttcttgacaccacggatcttcttagctctgttcttgcgttc 431

                                                                       
Query: 281 cttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgaggcggta 340
            || || |||||||| || ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 430 tttcatttgcttgcgagatttctcaaccttggtagcaagaccattcctgatgaggcggta 371

             
Query: 341 ct 342
           ||
Sbjct: 370 ct 369

---

>dbj|AK063794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F01, full
           insert sequence
          Length = 780

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Minus

                                                                       
Query: 221 ggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttcttcctttc 280
           |||||| || |||||||||||||| ||||||||||||||||| | ||||||||| | |||
Sbjct: 489 ggcatcaccagccttggtcttcttgacaccacggatcttcttagctctgttcttgcgttc 430

                                                                       
Query: 281 cttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgaggcggta 340
            || || |||||||| || ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 429 tttcatttgcttgcgagatttctcaaccttggtagcaagaccattcctgatgaggcggta 370

             
Query: 341 ct 342
           ||
Sbjct: 369 ct 368

---

>gb|BT017800.1| Zea mays clone EL01N0506B01.c mRNA sequence
          Length = 767

 Score =  127 bits (64), Expect = 3e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           ||||||||||| || || |||||||||||||| ||||||||||||||||| |  ||||||
Sbjct: 504 ttcttcttggcgtcaccagccttggtcttcttgacaccacggatcttcttggccctgttc 445

                                                                       
Query: 273 ttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatg 332
           ||||  || || || |||||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct: 444 ttccgctctttcatttgcttgcgggacttctcaaccttagtagcaagaccattcctgatg 385

                   
Query: 333 aggcggta 340
           ||||||||
Sbjct: 384 aggcggta 377

---

>gb|AF298769.1|AF298769 Zea mays 40S ribosomal protein S24 mRNA, complete cds
          Length = 646

 Score =  127 bits (64), Expect = 3e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           ||||||||||| || || |||||||||||||| ||||||||||||||||| |  ||||||
Sbjct: 433 ttcttcttggcgtcaccagccttggtcttcttgacaccacggatcttcttggccctgttc 374

                                                                       
Query: 273 ttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatg 332
           ||||  || || || |||||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct: 373 ttccgctctttcatttgcttgcgggacttctcaaccttagtagcaagaccattcctgatg 314

                   
Query: 333 aggcggta 340
           ||||||||
Sbjct: 313 aggcggta 306

---

>gb|AY103563.1| Zea mays PCO066882 mRNA sequence
          Length = 971

 Score =  127 bits (64), Expect = 3e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           ||||||||||| || || |||||||||||||| ||||||||||||||||| |  ||||||
Sbjct: 570 ttcttcttggcgtcaccagccttggtcttcttgacaccacggatcttcttggccctgttc 511

                                                                       
Query: 273 ttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatg 332
           ||||  || || || |||||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct: 510 ttccgctctttcatttgcttgcgggacttctcaaccttagtagcaagaccattcctgatg 451

                   
Query: 333 aggcggta 340
           ||||||||
Sbjct: 450 aggcggta 443

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  119 bits (60), Expect = 7e-24
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                            
Query: 239      cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
                |||||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||
Sbjct: 20818917 cttcttcacaccacggatcttctttgctctgttcttccgttccttcatctgcttacgtga 20818858

                                        
Query: 299      cttctctaccttggtagcaagacc 322
                |||||||||||| || ||||||||
Sbjct: 20818857 cttctctaccttagtggcaagacc 20818834



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                        
Query: 94       acataaatggcaaagtcttttctagtcataattaagcactcagcaacattggcaca 149
                |||||| ||||||| | ||||||||| ||||||||||| |||| || |||| ||||
Sbjct: 20819201 acataagtggcaaaat-ttttctagttataattaagcattcagtaatattgccaca 20819147

---

>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0458E11
          Length = 148798

 Score =  119 bits (60), Expect = 7e-24
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                         
Query: 239   cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
             |||||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||
Sbjct: 73592 cttcttcacaccacggatcttctttgctctgttcttccgttccttcatctgcttacgtga 73533

                                     
Query: 299   cttctctaccttggtagcaagacc 322
             |||||||||||| || ||||||||
Sbjct: 73532 cttctctaccttagtggcaagacc 73509



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                     
Query: 94    acataaatggcaaagtcttttctagtcataattaagcactcagcaacattggcaca 149
             |||||| ||||||| | ||||||||| ||||||||||| |||| || |||| ||||
Sbjct: 73876 acataagtggcaaaat-ttttctagttataattaagcattcagtaatattgccaca 73822

---

>gb|AY108428.1| Zea mays PCO105386 mRNA sequence
          Length = 521

 Score =  111 bits (56), Expect = 2e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 239 cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
           |||||||||||||||||| |||||||  |||||||| | |||||| |||||||| |||||
Sbjct: 434 cttcttcacaccacggattttctttgccctgttcttacgttccttcatctgctttcgtga 493

                                       
Query: 299 cttctctaccttggtagcaagaccgttc 326
           ||||||||||||||||||||| ||||||
Sbjct: 494 cttctctaccttggtagcaaggccgttc 521

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 6e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                           
Query: 239     cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
               |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||
Sbjct: 7258137 cttcttcacaccacggatcttctttgctctgttcttcctctccttcatctgcttgcgaga 7258196

                              
Query: 299     cttctctaccttggt 313
               |||||| ||||||||
Sbjct: 7258197 cttctcaaccttggt 7258211

---

>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0620H05
          Length = 161808

 Score =  109 bits (55), Expect = 6e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                          
Query: 239    cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
              |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||
Sbjct: 158074 cttcttcacaccacggatcttctttgctctgttcttcctctccttcatctgcttgcgaga 158133

                             
Query: 299    cttctctaccttggt 313
              |||||| ||||||||
Sbjct: 158134 cttctcaaccttggt 158148

---

>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  109 bits (55), Expect = 6e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                         
Query: 239   cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
             |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||
Sbjct: 33945 cttcttcacaccacggatcttctttgctctgttcttcctctccttcatctgcttgcgaga 34004

                            
Query: 299   cttctctaccttggt 313
             |||||| ||||||||
Sbjct: 34005 cttctcaaccttggt 34019

---

>gb|AY106030.1| Zea mays PCO144919 mRNA sequence
          Length = 423

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 278 ttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatgaggcg 337
           |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 415 ttccttcatctgctttcgtgacttctctaccttggtagcaaggccgttcctgatgaggcg 356

                
Query: 338 gtact 342
           |||||
Sbjct: 355 gtact 351

---

>gb|AY086740.1| Arabidopsis thaliana clone 27178 mRNA, complete sequence
          Length = 703

 Score =  103 bits (52), Expect = 4e-19
 Identities = 106/124 (85%)
 Strand = Plus / Minus

                                                                       
Query: 208 cttatttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttc 267
           |||| |||||||||||||| || |||||||||||||| ||||||||||||||||| |  |
Sbjct: 505 cttacttcttcttggcatcaccagccttggtcttcttaacaccacggatcttcttcgccc 446

                                                                       
Query: 268 tgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcc 327
           |||||||||| ||||||||||| || | ||| ||||| | ||||||  |||| || ||||
Sbjct: 445 tgttcttcctctccttgatctgtttccttgatttctcaatcttggtgtcaagtccattcc 386

               
Query: 328 tgat 331
           ||||
Sbjct: 385 tgat 382

---

>ref|NM_122689.2| Arabidopsis thaliana structural constituent of ribosome AT5G28060
           mRNA, complete cds
          Length = 745

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                       
Query: 208 cttatttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttc 267
           |||| |||||||||| ||| || |||||||||||||| ||||||||||||||||| |  |
Sbjct: 504 cttacttcttcttggtatcaccagccttggtcttcttaacaccacggatcttcttcgccc 445

                                                                       
Query: 268 tgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcc 327
           |||||||||| ||||||||||| || | ||| ||||| | ||||||  |||| || ||||
Sbjct: 444 tgttcttcctctccttgatctgtttccttgatttctcaatcttggtgtcaagtccattcc 385

               
Query: 328 tgat 331
           ||||
Sbjct: 384 tgat 381

---

>gb|BT018027.1| Zea mays clone EL01N0529G08.c mRNA sequence
          Length = 564

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           ||||||||||| || || || ||||||||  | ||||| ||||||||||| |  ||||||
Sbjct: 378 ttcttcttggcgtcaccagctttggtcttggtgacaccgcggatcttcttggccctgttc 319

                                                                       
Query: 273 ttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctgatg 332
           ||||  || || || |||||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct: 318 ttccgctctttcatttgcttgcgggacttctcaaccttagtagcaagaccattcctgatg 259

                   
Query: 333 aggcggta 340
           ||||||||
Sbjct: 258 aggcggta 251

---

>gb|AY072478.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 466

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                       
Query: 208 cttatttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttc 267
           |||| |||||||||| ||| || |||||||||||||| ||||||||||||||||| |  |
Sbjct: 403 cttacttcttcttggtatcaccagccttggtcttcttaacaccacggatcttcttcgccc 344

                                                                       
Query: 268 tgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcc 327
           |||||||||| ||||||||||| || | ||| ||||| | ||||||  |||| || ||||
Sbjct: 343 tgttcttcctctccttgatctgtttccttgatttctcaatcttggtgtcaagtccattcc 284

               
Query: 328 tgat 331
           ||||
Sbjct: 283 tgat 280

---

>gb|AF386992.1|AF386992 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 692

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                       
Query: 208 cttatttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttc 267
           |||| |||||||||| ||| || |||||||||||||| ||||||||||||||||| |  |
Sbjct: 475 cttacttcttcttggtatcaccagccttggtcttcttaacaccacggatcttcttcgccc 416

                                                                       
Query: 268 tgttcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcc 327
           |||||||||| ||||||||||| || | ||| ||||| | ||||||  |||| || ||||
Sbjct: 415 tgttcttcctctccttgatctgtttccttgatttctcaatcttggtgtcaagtccattcc 356

               
Query: 328 tgat 331
           ||||
Sbjct: 355 tgat 352

---

>ref|NM_111364.2| Arabidopsis thaliana structural constituent of ribosome AT3G04920
           mRNA, complete cds
          Length = 739

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 505 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 446

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 445 ttcctttccttaatttgtttccttgacttctc 414

---

>gb|AY094044.1| Arabidopsis thaliana AT3g04920/T9J14_13 mRNA, complete cds
          Length = 402

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 398 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 339

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 338 ttcctttccttaatttgtttccttgacttctc 307

---

>gb|AY093332.1| Arabidopsis thaliana putative ribosomal protein s19 or s24
           (At3g04920) mRNA, complete cds
          Length = 444

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 398 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 339

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 338 ttcctttccttaatttgtttccttgacttctc 307

---

>gb|AY062671.1| Arabidopsis thaliana putative ribosomal protein (At3g04920;
           T9J14.13) mRNA, complete cds
          Length = 681

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 465 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 406

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 405 ttcctttccttaatttgtttccttgacttctc 374

---

>gb|AY050364.1| Arabidopsis thaliana AT3g04920/T9J14_13 mRNA, complete cds
          Length = 708

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 474 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 415

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 414 ttcctttccttaatttgtttccttgacttctc 383

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                            
Query: 239      cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
                |||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| ||
Sbjct: 30151620 cttcttgacaccacggatcttcttagctctgttcttgcgttctttcatttgcttgcgaga 30151679

                                        
Query: 299      cttctctaccttggtagcaagacc 322
                 ||||| |||||||||||||||||
Sbjct: 30151680 tttctcaaccttggtagcaagacc 30151703



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 255      atcttctttgttctgttcttccttt 279
                ||||||||||| |||||||||||||
Sbjct: 19638408 atcttctttgtgctgttcttccttt 19638432

---

>emb|BX825848.1|CNS0A57X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZG02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 671

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 454 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 395

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 394 ttcctttccttaatttgtttccttgacttctc 363

---

>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0022F10
          Length = 150498

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                         
Query: 239   cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
             |||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| ||
Sbjct: 56442 cttcttgacaccacggatcttcttagctctgttcttgcgttctttcatttgcttgcgaga 56501

                                     
Query: 299   cttctctaccttggtagcaagacc 322
              ||||| |||||||||||||||||
Sbjct: 56502 tttctcaaccttggtagcaagacc 56525

---

>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0690B02
          Length = 153116

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                          
Query: 239    cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
              |||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| ||
Sbjct: 147610 cttcttgacaccacggatcttcttagctctgttcttgcgttctttcatttgcttgcgaga 147669

                                      
Query: 299    cttctctaccttggtagcaagacc 322
               ||||| |||||||||||||||||
Sbjct: 147670 tttctcaaccttggtagcaagacc 147693

---

>gb|AY086479.1| Arabidopsis thaliana clone 25350 mRNA, complete sequence
          Length = 720

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgttc 272
           |||||||||||||| || ||||| |||||||| ||||||||||| ||||| |  ||||||
Sbjct: 505 ttcttcttggcatcaccagcctttgtcttcttaacaccacggattttcttcgccctgttc 446

                                           
Query: 273 ttcctttccttgatctgcttgcgtgacttctc 304
           ||||||||||| || || || | |||||||||
Sbjct: 445 ttcctttccttaatttgtttccttgacttctc 414

---

>gb|BT014030.1| Lycopersicon esculentum clone 133092F, mRNA sequence
          Length = 767

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 102/124 (82%)
 Strand = Plus / Minus

                                                                       
Query: 211 atttcttcttggcatctccggccttggtcttcttcacaccacggatcttctttgttctgt 270
           |||||||||| ||||| || |||||||||||||| ||||| || | |||||| | |||||
Sbjct: 485 atttcttcttagcatcaccagccttggtcttctttacaccgcgaaccttcttggctctgt 426

                                                                       
Query: 271 tcttcctttccttgatctgcttgcgtgacttctctaccttggtagcaagaccgttcctga 330
           |||| |||||||| || || || |  |||||||| ||||| ||  |||| || |||||||
Sbjct: 425 tctttctttccttcatttgtttcctagacttctcaaccttagtgtcaagcccattcctga 366

               
Query: 331 tgag 334
           ||||
Sbjct: 365 tgag 362

---

>dbj|AP004938.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096b,
            complete sequence
          Length = 65932

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 243  ttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtgacttc 302
            |||||||| ||||||||||| | |||||||||||||||||| | |||||| | |||||| 
Sbjct: 8434 ttcacaccccggatcttcttggctctgttcttcctttccttcaactgcttccttgacttt 8375

                    
Query: 303  tctacctt 310
            ||||||||
Sbjct: 8374 tctacctt 8367

---

>gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana Clone F15F15, Chromosome V,
              complete sequence
          Length = 157000

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 239    cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctg 289
              |||||| ||||||||||||||||| |  ||||||||||| |||||||||||
Sbjct: 142510 cttcttaacaccacggatcttcttcgccctgttcttcctctccttgatctg 142560

---

>dbj|AP006365.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT31H17, TM0171,
             complete sequence
          Length = 126380

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 231   gccttggtcttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgc 290
             ||||||||||| |||||||| || |||||||| | ||||||||||   ||||| | ||||
Sbjct: 14466 gccttggtctttttcacaccccgaatcttcttggctctgttcttctgctccttcaactgc 14525

                                                      
Query: 291   ttgcgtgacttctctaccttggtagcaagaccgttcctgat 331
             || | |||||| ||||||||  |  ||||| ||||||||||
Sbjct: 14526 ttccttgacttttctaccttattgtcaagatcgttcctgat 14566

---

>ref|XM_753569.1| Ustilago maydis 521 hypothetical protein (UM02515.1) partial mRNA
          Length = 804

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 228 ccggccttggtcttcttcacaccacggatcttctt 262
           ||||||||||||||||| |||||||||| ||||||
Sbjct: 419 ccggccttggtcttcttgacaccacggaccttctt 385

---

>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 239   cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
             |||||| ||||||||||| ||||| |  ||||||||||||||||| || || || | |||
Sbjct: 42996 cttcttaacaccacggattttcttcgccctgttcttcctttccttaatttgtttccttga 43055

                   
Query: 299   cttctc 304
             ||||||
Sbjct: 43056 cttctc 43061

---

>ref|NM_009807.2| Mus musculus caspase 1 (Casp1), mRNA
          Length = 1533

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 566 atcttctttgttctgttcttccttt 542

---

>gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, complete sequence
          Length = 260181

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 255  atcttctttgttctgttcttccttt 279
            |||||||||||||||||||||||||
Sbjct: 4447 atcttctttgttctgttcttccttt 4423

---

>gb|BC008152.1| Mus musculus caspase 1, mRNA (cDNA clone MGC:6106 IMAGE:3583883),
           complete cds
          Length = 1533

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 566 atcttctttgttctgttcttccttt 542

---

>gb|AC135565.18| Medicago truncatula clone mth2-19b12, complete sequence
          Length = 121647

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                         
Query: 239   cttcttcacaccacggatcttctttgttctgttcttcctttccttgatctgcttgcgtga 298
             |||||| || ||||||||||||||||  | |||||| |||||||| || ||||| | |||
Sbjct: 14071 cttctttactccacggatcttctttgcccggttctttctttccttcatttgcttccttga 14130

                                  
Query: 299   cttctctaccttggtagcaag 319
             ||| || ||||| ||| ||||
Sbjct: 14131 cttttcaaccttagtatcaag 14151

---

>dbj|AK132826.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930428C09 product:caspase 1, full insert
           sequence
          Length = 2219

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 398 atcttctttgttctgttcttccttt 374

---

>dbj|AK163069.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530009P10 product:caspase 1,
           full insert sequence
          Length = 2223

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 653 atcttctttgttctgttcttccttt 629

---

>gb|AC141637.3| Mus musculus BAC clone RP23-424D5 from 9, complete sequence
          Length = 183859

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 255    atcttctttgttctgttcttccttt 279
              |||||||||||||||||||||||||
Sbjct: 131107 atcttctttgttctgttcttccttt 131083

---

>gb|U04269.1|MMU04269 Mus musculus 129 interleukin-1 beta converting enzyme (ICE) gene,
            complete cds
          Length = 9862

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 255  atcttctttgttctgttcttccttt 279
            |||||||||||||||||||||||||
Sbjct: 4754 atcttctttgttctgttcttccttt 4730

---

>gb|L03799.1|MUSILBC Mouse interleukin-1 beta convertase (IL-1bc) mRNA, complete cds
          Length = 1322

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 368 atcttctttgttctgttcttccttt 344

---

>gb|L28095.1|MUSIL1B Mouse interleukin 1-beta converting enzyme, complete cds
          Length = 1360

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 255 atcttctttgttctgttcttccttt 279
           |||||||||||||||||||||||||
Sbjct: 412 atcttctttgttctgttcttccttt 388

---

>emb|AL645603.12| Mouse DNA sequence from clone RP23-299L18 on chromosome 11 Contains the
             5' end of the Nf2 gene for neurofibromatosis 2, the 5' end
             of the Nipsnap1 gene for 4-nitrophenylphosphatase domain
             and non-neuronal SNAP25-like protein homolog 1 (C.
             elegans) and a CpG island, complete sequence
          Length = 73503

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 258   ttctttgttctgttcttcctttcctt 283
             ||||||||| ||||||||||||||||
Sbjct: 44610 ttctttgttttgttcttcctttcctt 44585

---

>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10,
             complete sequence
          Length = 199956

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 258   ttctttgttctgttcttcctttcctt 283
             ||||||||| ||||||||||||||||
Sbjct: 23919 ttctttgttttgttcttcctttcctt 23944

---

>gb|AC164524.5| Mus musculus  BAC RP23-438F8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180937

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    ctttgttctgttcttcctttc 280
              |||||||||||||||||||||
Sbjct: 136556 ctttgttctgttcttcctttc 136576

---

>gb|AC148709.1| Macaca mulatta Major Histocompatibility Complex BAC MMU391L07, complete
             sequence
          Length = 142969

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 237   gtcttcttcacaccacggatcttctttgttctg 269
             ||||||||||| ||| | |||||||||||||||
Sbjct: 81827 gtcttcttcaccccaggcatcttctttgttctg 81859

---

>gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326I17, complete
              sequence
          Length = 175689

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 237    gtcttcttcacaccacggatcttctttgttctg 269
              ||||||||||| ||| | |||||||||||||||
Sbjct: 165618 gtcttcttcaccccaggcatcttctttgttctg 165650

---

>gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326H24,
            complete sequence
          Length = 202513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 237  gtcttcttcacaccacggatcttctttgttctg 269
            ||||||||||| ||| | |||||||||||||||
Sbjct: 8915 gtcttcttcaccccaggcatcttctttgttctg 8947

---

>gb|AC148695.1| Macaca mulatta Major Histocompatibility Complex BAC MMU244P03, complete
              sequence
          Length = 200270

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 237    gtcttcttcacaccacggatcttctttgttctg 269
              ||||||||||| ||| | |||||||||||||||
Sbjct: 152697 gtcttcttcaccccaggcatcttctttgttctg 152729

---

>gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex BAC MMU234G08, complete
              sequence
          Length = 200068

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 237    gtcttcttcacaccacggatcttctttgttctg 269
              ||||||||||| ||| | |||||||||||||||
Sbjct: 193653 gtcttcttcaccccaggcatcttctttgttctg 193685

---

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 237     gtcttcttcacaccacggatcttctttgttctg 269
               ||||||||||| ||| | |||||||||||||||
Sbjct: 1253599 gtcttcttcaccccaggcatcttctttgttctg 1253567

---

>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 159299

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    ctttgttctgttcttcctttc 280
              |||||||||||||||||||||
Sbjct: 150428 ctttgttctgttcttcctttc 150408

---

>dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0014E04
          Length = 146710

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 255    atcttctttgttctgttcttccttt 279
              ||||||||||| |||||||||||||
Sbjct: 106860 atcttctttgtgctgttcttccttt 106884

---

>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence
          Length = 167396

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   gtcttcttcacaccacggatc 257
             |||||||||||||||||||||
Sbjct: 80153 gtcttcttcacaccacggatc 80173

---

>gb|AC140395.2| Mus musculus BAC clone RP24-183G4 from chromosome 6, complete sequence
          Length = 183546

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   cttcctttccttgatctgct 291
             ||||||||||||||||||||
Sbjct: 55982 cttcctttccttgatctgct 55963

---

>gb|AC133124.3| Homo sapiens 3 BAC RP11-312A19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119915

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    ttttaacataccaggagatgacat 97
             ||||||| ||||||||||||||||
Sbjct: 49839 ttttaacttaccaggagatgacat 49816

---

>gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete sequence
          Length = 274210

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    ccggccttggtcttcttcac 247
              ||||||||||||||||||||
Sbjct: 142323 ccggccttggtcttcttcac 142342

---

>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete
             sequence
          Length = 81780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ttcctttccttgatctgctt 292
             ||||||||||||||||||||
Sbjct: 12838 ttcctttccttgatctgctt 12819

---

>gb|AC011676.10| Homo sapiens chromosome , clone RP11-10J21, complete sequence
          Length = 197630

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tttgttctgttcttcctttc 280
             ||||||||||||||||||||
Sbjct: 55987 tttgttctgttcttcctttc 56006

---

>gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    tttgttctgttcttcctttc 280
              ||||||||||||||||||||
Sbjct: 179462 tttgttctgttcttcctttc 179481

---

>emb|AL035087.20|HS626B19 Human DNA sequence from clone RP4-626B19 on chromosome 6q16.1-21 Contains
              the 3' end of the PRDM13 gene for PR-domain zinc-finger
              protein 13, and three CpG islands, complete sequence
          Length = 119950

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ggtgaaaggatgaagacaga 201
              ||||||||||||||||||||
Sbjct: 101339 ggtgaaaggatgaagacaga 101358

---

>gb|AC166262.3| Mus musculus  BAC RP23-256D10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 175073

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 254    gatcttctttgttctgttcttcct 277
              |||||| |||||||||||||||||
Sbjct: 171792 gatcttttttgttctgttcttcct 171769

---

>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete
              sequence
          Length = 222405

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tctgttcttcctttccttga 285
              ||||||||||||||||||||
Sbjct: 142074 tctgttcttcctttccttga 142055

---

>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ctttgttctgttcttccttt 279
             ||||||||||||||||||||
Sbjct: 84059 ctttgttctgttcttccttt 84078

---

>dbj|AK123283.1| Homo sapiens cDNA FLJ41289 fis, clone BRAMY2038846
          Length = 3159

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 tttgttctgttcttcctttc 280
           ||||||||||||||||||||
Sbjct: 530 tttgttctgttcttcctttc 549

---

>gb|AC067836.6| Homo sapiens chromosome 8, clone RP11-785H20, complete sequence
          Length = 150453

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    ttctgttcttcctttccttg 284
              ||||||||||||||||||||
Sbjct: 101519 ttctgttcttcctttccttg 101538

---

>gb|AC037486.4| Homo sapiens chromosome 8, clone RP11-398G24, complete sequence
          Length = 189041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  ttctgttcttcctttccttg 284
            ||||||||||||||||||||
Sbjct: 9171 ttctgttcttcctttccttg 9190

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 110      cttttctagtcataattaag 129
                ||||||||||||||||||||
Sbjct: 21753765 cttttctagtcataattaag 21753784

---

>gb|AC096729.3| Homo sapiens BAC clone RP11-63M2 from 4, complete sequence
          Length = 161900

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    gcaaaggctgatggtgaaag 189
              ||||||||||||||||||||
Sbjct: 131876 gcaaaggctgatggtgaaag 131857

---

>gb|AC133436.2| Homo sapiens 3 BAC RP13-486I7 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 115667

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  ttttaacataccaggagatgacat 97
           ||||||| ||||||||||||||||
Sbjct: 504 ttttaacttaccaggagatgacat 481

---

>gb|AC137833.3| Homo sapiens 3 BAC RP13-961N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51297

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    ttttaacataccaggagatgacat 97
             ||||||| ||||||||||||||||
Sbjct: 49800 ttttaacttaccaggagatgacat 49777

---

>emb|BX005434.6| Zebrafish DNA sequence from clone DKEY-106M21, complete sequence
          Length = 158952

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    ctttgttctgttcttccttt 279
              ||||||||||||||||||||
Sbjct: 112086 ctttgttctgttcttccttt 112105

---

>emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, complete sequence
          Length = 167613

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctgttcttcctttccttga 285
              ||||||||||||||||||||
Sbjct: 136083 tctgttcttcctttccttga 136102

---

>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   cttttctagtcataattaag 129
             ||||||||||||||||||||
Sbjct: 33348 cttttctagtcataattaag 33367

---

>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C12
          Length = 136799

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    cttttctagtcataattaag 129
              ||||||||||||||||||||
Sbjct: 121335 cttttctagtcataattaag 121354

---

>gb|AY620614.1| Pithecia pithecia pithecia Alu insertion locus Lago_H05_Pithecia_46
            sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  gcaacattggcacagggata 155
            ||||||||||||||||||||
Sbjct: 1272 gcaacattggcacagggata 1253

---

>gb|AY620613.1| Saimiri sciureus sciureus Alu insertion locus Lago_H05_Saimiri_46
           sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 gcaacattggcacagggata 155
           ||||||||||||||||||||
Sbjct: 945 gcaacattggcacagggata 926

---

>gb|AY620611.1| Alouatta sara Alu insertion locus Lago_H05_Alouatta_46 sequence
          Length = 1298

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  gcaacattggcacagggata 155
            ||||||||||||||||||||
Sbjct: 1265 gcaacattggcacagggata 1246

---

>gb|AY620610.1| Ateles geoffroyi Alu insertion locus Lago_H05_Ateles_46 sequence
          Length = 1285

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  gcaacattggcacagggata 155
            ||||||||||||||||||||
Sbjct: 1252 gcaacattggcacagggata 1233

---

>gb|AY620609.1| Saguinus labiatus Alu insertion locus Lago_H05_Saguinus_46 sequence
          Length = 980

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 gcaacattggcacagggata 155
           ||||||||||||||||||||
Sbjct: 947 gcaacattggcacagggata 928

---

>gb|AY620608.1| Aotus trivirgatus Alu insertion locus Lago_H05_Aotus_46 sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 gcaacattggcacagggata 155
           ||||||||||||||||||||
Sbjct: 930 gcaacattggcacagggata 911

---

>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ttcctttccttgatctgctt 292
              ||||||||||||||||||||
Sbjct: 168806 ttcctttccttgatctgctt 168825

---

>gb|AC153542.4| Mus musculus 10 BAC RP23-463O2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187858

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 254   gatcttctttgttctgttcttcct 277
             |||||| |||||||||||||||||
Sbjct: 93339 gatcttttttgttctgttcttcct 93316

---

>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence
          Length = 192344

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   ttctgttcttcctttccttg 284
             ||||||||||||||||||||
Sbjct: 82158 ttctgttcttcctttccttg 82177

---

>emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on chromosome X, complete
             sequence
          Length = 131629

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   atgtgcttatttcttcttgg 222
             ||||||||||||||||||||
Sbjct: 78497 atgtgcttatttcttcttgg 78516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,815,845
Number of Sequences: 3902068
Number of extensions: 3815845
Number of successful extensions: 80189
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79905
Number of HSP's gapped (non-prelim): 284
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---