| Clone Name | rbags38d20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds Length = 2281 Score = 1168 bits (589), Expect = 0.0 Identities = 622/633 (98%), Gaps = 2/633 (0%) Strand = Plus / Minus Query: 1 ttgatgtt-aagtagatggacatcgtgcttattcn-ctatgaacatgtccaccggtgttc 58 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2232 ttgatgttcaagtagatggacatcgtgcttattccactatgaacatgtccaccggtgttc 2173 Query: 59 aatcttcttacaacaaataatggtacacatggggaaaaataatggcttgcatcctggcgc 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2172 aatcttcttacaacaaataatggtacacatggggaaaaataatggcttgcatcctggcgc 2113 Query: 119 tggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcnnnnnnng 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2112 tggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcaaaaaaag 2053 Query: 179 gggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagcaaattgctc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2052 gggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagcaaattgctc 1993 Query: 239 gcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacgtt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1992 gcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacgtt 1933 Query: 299 tcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1932 tcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcg 1873 Query: 359 tataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 tataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttt 1813 Query: 419 tgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1812 tgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatc 1753 Query: 479 ttgtgtccatcagcattagctgctcgctccacagcctgattcgctaattgattgaaatga 538 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1752 ttgtgtccatcagcattggctgctcgctccacagcctgattcgctaattgattgaaatga 1693 Query: 539 ataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggta 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 ataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggta 1633 Query: 599 aaagcgttctgtgccaaataatcttccctcaga 631 ||||||||||||||||||||||||||||||||| Sbjct: 1632 aaagcgttctgtgccaaataatcttccctcaga 1600
>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds Length = 2089 Score = 1144 bits (577), Expect = 0.0 Identities = 619/633 (97%), Gaps = 2/633 (0%) Strand = Plus / Minus Query: 1 ttgatgtt-aagtagatggacatcgtgcttattcn-ctatgaacatgtccaccggtgttc 58 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2055 ttgatgttcaagtagatggacatcgtgcttattccactatgaacatgtccaccggtgttc 1996 Query: 59 aatcttcttacaacaaataatggtacacatggggaaaaataatggcttgcatcctggcgc 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 aatcttcttacaacaaataatggtacacatggggaaaaataatggcttgcatcctggcgc 1936 Query: 119 tggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcnnnnnnng 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1935 tggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcaaaaaaag 1876 Query: 179 gggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagcaaattgctc 238 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1875 gggatcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaagcaaattgctc 1816 Query: 239 gcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacgtt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1815 gcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacgtt 1756 Query: 299 tcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcg 358 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1755 tcttctttcttttacctagcctcgtcttctaggttgcggaacccggctgtaaggtcgtcg 1696 Query: 359 tataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 tataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttt 1636 Query: 419 tgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 tgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatc 1576 Query: 479 ttgtgtccatcagcattagctgctcgctccacagcctgattcgctaattgattgaaatga 538 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 ttgtgtccatcagcattggctgctcgctccacagcctgattcgctaattgattgaaatga 1516 Query: 539 ataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggta 598 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1515 ataatgttgcgcatcatccaaacagatttgtagaatggacaatacttgtcgtatggggta 1456 Query: 599 aaagcgttctgtgccaaataatcttccctcaga 631 ||||||||||||||||||||||||||||||||| Sbjct: 1455 aaagcgttctgtgccaaataatcttccctcaga 1423
>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds Length = 2358 Score = 714 bits (360), Expect = 0.0 Identities = 435/458 (94%), Gaps = 4/458 (0%) Strand = Plus / Minus Query: 178 ggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaa-gcaaattgc 236 |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 2112 gggggtcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaaagcaaattgc 2053 Query: 237 tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacg 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2052 tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaatg 1993 Query: 297 tttcttctttc---ttttacctagcctcgtcttctaggttgcggaacccggcggtaaggt 353 |||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1992 tttcttctctccttttttacctagcctcgtcttctaggttgcggaacccggtggtgaggt 1933 Query: 354 cgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcga 413 ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1932 cgtcgtacaacttctggaattttgcgattaggacgtcttcgccttctgcggggtcttcga 1873 Query: 414 acttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtagg 473 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1872 acttttgggatacaaggcggtaaaatagatcgcccatgcgactctttacgacggcgtagg 1813 Query: 474 ttatcttgtgtccatcagcattagctgctcgctccacagcctgattcgctaattgattga 533 |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1812 ttatcttgtgtccatcagcattggctgctcgctccacggcctgattcgctaatgtattga 1753 Query: 534 aatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatg 593 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1752 aatgaataatgttgcgcatcatccagacagatttgtagaatggacaatacttgtcatatg 1693 Query: 594 gggtaaaagcgttctgtgccaaataatcttccctcaga 631 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1692 gggtaaaagcattctgtgccaaataatcttccctcaga 1655 Score = 188 bits (95), Expect = 2e-44 Identities = 162/178 (91%), Gaps = 10/178 (5%) Strand = Plus / Minus Query: 1 ttgatgtt-aagtagatggacatcgtgcttattcn--ctatgaacatgtccaccggtgtt 57 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 2311 ttgatgttcaagtagatggacatcgtgcttattcctcctatgaacatgtccaccggtgct 2252 Query: 58 caatcttctta--caacaaataatggtacacatggggaaaaa-taatggcttgcatcctg 114 || |||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 2251 cagtcttcttatacaacaaataatggtacacatggtgaaaaaataatggcgtgcatcctg 2192 Query: 115 gcgctggagaccaaataatgt-aaaatcct---gaaaaaacaaggctgtctgtctgtc 168 ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 2191 gcgctggagaccaaacaatgtaaaaatcctggggaaaaaacaaggctgtctgtctgtc 2134
>dbj|AK061925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C02, full insert sequence Length = 1001 Score = 285 bits (144), Expect = 9e-74 Identities = 273/316 (86%) Strand = Plus / Minus Query: 312 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 371 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 710 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 651 Query: 372 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 431 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| |||| Sbjct: 650 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 591 Query: 432 ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 491 | ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||||||| Sbjct: 590 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 531 Query: 492 cattagctgctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgca 551 |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 530 cattagctgcacgctccacagcctgatttgctaatgtattgaaatgaataatgttgcgca 471 Query: 552 tcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtg 611 ||||||||||||| ||||||||||| || ||||||| ||||||||||| || ||||||| Sbjct: 470 tcatccaaacagacttgtagaatggacagaacttgtcatatggggtaaatgcattctgtg 411 Query: 612 ccaaataatcttccct 627 |||| ||||||||||| Sbjct: 410 ccaagtaatcttccct 395 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 aagtagatggacatcgtgcttattc 33 |||||||||| |||||||||||||| Sbjct: 994 aagtagatggtcatcgtgcttattc 970
>dbj|AK069821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L13, full insert sequence Length = 2315 Score = 278 bits (140), Expect = 2e-71 Identities = 272/316 (86%) Strand = Plus / Minus Query: 312 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 371 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 2009 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 1950 Query: 372 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 431 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| |||| Sbjct: 1949 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 1890 Query: 432 ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 491 | ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||||||| Sbjct: 1889 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 1830 Query: 492 cattagctgctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgca 551 |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 1829 cattagctgcacgctccacagcctgatttgctaatgtattgaaatgaataatgttgcgca 1770 Query: 552 tcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtg 611 ||||||||||||| | ||||||||| || ||||||| ||||||||||| || ||||||| Sbjct: 1769 tcatccaaacagactcgtagaatggacagaacttgtcatatggggtaaatgcattctgtg 1710 Query: 612 ccaaataatcttccct 627 |||| ||||||||||| Sbjct: 1709 ccaagtaatcttccct 1694 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 aagtagatggacatcgtgcttattc 33 |||||||||| |||||||||||||| Sbjct: 2293 aagtagatggtcatcgtgcttattc 2269
>dbj|AK067063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J10, full insert sequence Length = 2295 Score = 238 bits (120), Expect = 2e-59 Identities = 264/312 (84%) Strand = Plus / Minus Query: 320 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgcg 379 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 1955 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgca 1896 Query: 380 acaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaat 439 | | || |||| ||| |||||||| || ||||| ||||| || || |||||||| ||| Sbjct: 1895 atcaaaacttctttgccctctgcgggatcctcgaatttttgcgacactaggcggtagaat 1836 Query: 440 agatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcattagct 499 ||||| ||||||||| ||||| ||| ||| || ||||| |||||||||||| |||| Sbjct: 1835 agatcgcccatgcgatgctttatgacactgtatgtaatcttctgtccatcagcaccagct 1776 Query: 500 gctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatccaa 559 || |||||||| ||||| | || ||| |||||||||||||||||||||||||||||| Sbjct: 1775 gcccgctccaccgcctgggttgccaatgtgttgaaatgaataatgttgcgcatcatccaa 1716 Query: 560 acagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgccaaataa 619 |||||||||||||||||||||||||| || |||||||| || || || |||||||||||| Sbjct: 1715 acagatttgtagaatgggcaatacttatcatatggggtgaatgcattttgtgccaaataa 1656 Query: 620 tcttccctcaga 631 ||||| |||||| Sbjct: 1655 tcttctctcaga 1644
>gb|AY104754.1| Zea mays PCO134411 mRNA sequence Length = 2254 Score = 192 bits (97), Expect = 1e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 317 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 376 ||||| |||||||||||||||||||| | ||||||||||||||| | |||| || || Sbjct: 1956 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1897 Query: 377 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 436 |||| | | |||||||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 1896 ccgaccaaagcttcttcgccttctgcaggatcctcgaacttttgggatactaggcgataa 1837 Query: 437 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 496 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1836 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1777 Query: 497 gctgctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatc 556 ||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 1776 gctgcccgctccacagcctgatttgccaatgtgttgaagtgaataatgttgcgcatcatc 1717 Query: 557 caaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgccaaa 616 ||||| ||||||||||||||||| |||| || |||||||| || || || ||||||||| Sbjct: 1716 caaacggatttgtagaatgggcagaacttatcatatggggtgaatgcattttgtgccaaa 1657 Query: 617 taatcttccctca 629 |||||||| |||| Sbjct: 1656 taatcttctctca 1644
>gb|BT024092.1| Zea mays clone EL01N0551D01 mRNA sequence Length = 2273 Score = 184 bits (93), Expect = 2e-43 Identities = 258/313 (82%) Strand = Plus / Minus Query: 317 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 376 ||||| |||||||||||||||||||| | |||||||||||| || | |||| || || Sbjct: 1967 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcatacagtttcttaaacttg 1908 Query: 377 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 436 |||| | | |||||||||||||| || || || |||||||||||||| ||||| ||| Sbjct: 1907 ccgaccaaagcttcttcgccttctgcaggatcctcaaacttttgggatactaggcgataa 1848 Query: 437 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 496 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1847 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1788 Query: 497 gctgctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatc 556 ||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 1787 gctgcccgctccacagcctgatttgccaatgtgttgaagtgaataatgttgcgcatcatc 1728 Query: 557 caaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgccaaa 616 ||||||||||||||||||||||| |||| || |||||||| || || || ||||||||| Sbjct: 1727 caaacagatttgtagaatgggcagaacttatcatatggggtgaatgcattttgtgccaaa 1668 Query: 617 taatcttccctca 629 |||||||| |||| Sbjct: 1667 taatcttctctca 1655
>gb|U36436.1|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRNA, partial cds Length = 2000 Score = 184 bits (93), Expect = 2e-43 Identities = 258/313 (82%) Strand = Plus / Minus Query: 317 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 376 ||||| |||||||||||||||||||| | ||||||||||||||| | |||| || || Sbjct: 1679 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1620 Query: 377 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 436 |||| | | ||||| |||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 1619 ccgaccaaagcttcttcaccttctgcaggatcctcgaacttttgggatactaggcgataa 1560 Query: 437 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 496 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1559 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1500 Query: 497 gctgctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatc 556 ||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 1499 gctgcccgctccacagcctgatttgccaatgtgttgaagtgaataatgttgcgcatcatc 1440 Query: 557 caaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgccaaa 616 ||||| ||||||||||||||||| |||| || |||||||| || || || ||||||||| Sbjct: 1439 caaacggatttgtagaatgggcagaacttatcatatggggtgaatgcattttgtgccaaa 1380 Query: 617 taatcttccctca 629 |||||||| |||| Sbjct: 1379 taatcttctctca 1367
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Minus Query: 530 ttgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatactt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4126312 ttgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatactt 4126257 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 320 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 378 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 4127190 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 4127132 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 428 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 487 |||||||| |||||||| ||||||||| ||||| ||| ||| || ||||| |||||| Sbjct: 4126997 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 4126938 Query: 488 tcagcattagctgctcgctccacagcct 515 |||||| |||||| |||||||| |||| Sbjct: 4126937 tcagcaccagctgcccgctccaccgcct 4126910 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tgtgccaaataatcttccctcaga 631 ||||||||||||||||| |||||| Sbjct: 4126149 tgtgccaaataatcttctctcaga 4126126
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Minus Query: 530 ttgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatactt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36326 ttgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatactt 36271 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 320 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 378 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 37204 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 37146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 428 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 487 |||||||| |||||||| ||||||||| ||||| ||| ||| || ||||| |||||| Sbjct: 37011 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 36952 Query: 488 tcagcattagctgctcgctccacagcct 515 |||||| |||||| |||||||| |||| Sbjct: 36951 tcagcaccagctgcccgctccaccgcct 36924 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tgtgccaaataatcttccctcaga 631 ||||||||||||||||| |||||| Sbjct: 36163 tgtgccaaataatcttctctcaga 36140
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 513 cctgattcgctaattgattgaaatgaataatgttgcgcatcatccaaacagatttgtaga 572 ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 26904301 cctgatttgctaatgtattgaaatgaataatgttgcgcatcatccaaacagacttgtaga 26904360 Query: 573 atgg 576 |||| Sbjct: 26904361 atgg 26904364 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 428 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 487 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 26903185 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 26903244 Query: 488 tcagcattagctgctcgctccacagcct 515 |||||||||||||| ||||||||||||| Sbjct: 26903245 tcagcattagctgcacgctccacagcct 26903272 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 312 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 371 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 26902973 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26903032 Query: 372 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 420 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 26903033 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26903081 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 593 ggggtaaaagcgttctgtgccaaataatcttccct 627 |||||||| || ||||||||||| ||||||||||| Sbjct: 26904488 ggggtaaatgcattctgtgccaagtaatcttccct 26904522 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aagtagatggacatcgtgcttattc 33 |||||||||| |||||||||||||| Sbjct: 26902689 aagtagatggtcatcgtgcttattc 26902713
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 513 cctgattcgctaattgattgaaatgaataatgttgcgcatcatccaaacagatttgtaga 572 ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 28062 cctgatttgctaatgtattgaaatgaataatgttgcgcatcatccaaacagacttgtaga 28121 Query: 573 atgg 576 |||| Sbjct: 28122 atgg 28125 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 428 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 487 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 26946 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 27005 Query: 488 tcagcattagctgctcgctccacagcct 515 |||||||||||||| ||||||||||||| Sbjct: 27006 tcagcattagctgcacgctccacagcct 27033 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 312 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 371 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 26734 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26793 Query: 372 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 420 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 26794 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26842 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 593 ggggtaaaagcgttctgtgccaaataatcttccct 627 |||||||| || ||||||||||| ||||||||||| Sbjct: 28249 ggggtaaatgcattctgtgccaagtaatcttccct 28283 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aagtagatggacatcgtgcttattc 33 |||||||||| |||||||||||||| Sbjct: 26450 aagtagatggtcatcgtgcttattc 26474
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 513 cctgattcgctaattgattgaaatgaataatgttgcgcatcatccaaacagatttgtaga 572 ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 158927 cctgatttgctaatgtattgaaatgaataatgttgcgcatcatccaaacagacttgtaga 158986 Query: 573 atgg 576 |||| Sbjct: 158987 atgg 158990 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 428 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 487 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 157811 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 157870 Query: 488 tcagcattagctgctcgctccacagcct 515 |||||||||||||| ||||||||||||| Sbjct: 157871 tcagcattagctgcacgctccacagcct 157898 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 312 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 371 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 157599 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 157658 Query: 372 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 420 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 157659 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 157707 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 593 ggggtaaaagcgttctgtgccaaataatcttccct 627 |||||||| || ||||||||||| ||||||||||| Sbjct: 159114 ggggtaaatgcattctgtgccaagtaatcttccct 159148 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aagtagatggacatcgtgcttattc 33 |||||||||| |||||||||||||| Sbjct: 157315 aagtagatggtcatcgtgcttattc 157339
>emb|X98767.1|BVVATPASE B.vulgaris mRNA for subunit A of the V-type ATPase Length = 2394 Score = 93.7 bits (47), Expect = 7e-16 Identities = 107/127 (84%) Strand = Plus / Minus Query: 503 cgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatccaaaca 562 ||||||||||||||||| || || | | |||||| |||||||||||||||||||| || Sbjct: 1772 cgctccacagcctgattggccaaattgtagaaatggataatgttgcgcatcatccagact 1713 Query: 563 gatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgccaaataatct 622 || ||||||||||||||| | ||||| |||| ||||| || || ||||||| ||| ||| Sbjct: 1712 gacttgtagaatgggcaaaatttgtcatatgctgtaaatgcattttgtgccagatagtct 1653 Query: 623 tccctca 629 ||||||| Sbjct: 1652 tccctca 1646
>gb|AF050673.1|AF050673 Gossypium hirsutum vacuolar H+-ATPase catalytic subunit mRNA, complete cds Length = 2378 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 529 attgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtc 588 ||||||||||| |||||||||||||||||| || || |||||||||||||| |||| || Sbjct: 1874 attgaaatgaacaatgttgcgcatcatccagacggacttgtagaatgggcagaacttatc 1815 Query: 589 gtatggggtaaaagcgttctgtgccaaataatcttccct 627 ||||| |||||||| ||||| || | |||||||||||| Sbjct: 1814 atatggagtaaaagcattctgagcaagataatcttccct 1776
>gb|L03186.1|COTATPASE Gossypium hirsutum vacuolar H+-ATPase catalytic subunit mRNA, complete cds Length = 2244 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 529 attgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtc 588 ||||||||||| ||| |||||||||||||||||||| |||||||| || || ||||||| Sbjct: 1823 attgaaatgaacaatattgcgcatcatccaaacagacttgtagaacggacagaacttgtc 1764 Query: 589 gtatggggtaaaagcgttctgtgccaaataatcttccct 627 ||||| |||||||| ||||| || | |||||||||||| Sbjct: 1763 atatggagtaaaagcattctgagcaagataatcttccct 1725
>gb|AF218356.1|AF218356 Allium cepa vacuolar H+-ATPase catalytic subunit mRNA, partial cds Length = 570 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 529 attgaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtc 588 |||||| ||||| ||||| ||||||||||||||||| ||||||||||| ||| | ||||| Sbjct: 351 attgaagtgaattatgttacgcatcatccaaacagacttgtagaatggacaaaatttgtc 292 Query: 589 gtatggggtaaaagcgttctgtgccaaataatcttccctca 629 || |||||||| || |||||||| ||||| ||||| |||| Sbjct: 291 atacggggtaaaggcattctgtgctaaatagtcttctctca 251
>dbj|AB004247.1| Citrus unshiu mRNA for H+-ATPase catalytic subunit, complete cds Length = 2304 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||| || Sbjct: 1694 gaaatggataatgttacgcatcatccaaacagacttgtagaaagggcagaacttgtcata 1635 Query: 592 tggggtaaaagcgttctg 609 ||| ||||| |||||||| Sbjct: 1634 tggagtaaatgcgttctg 1617
>emb|AJ278021.1|LES278021 Lycopersicon esculentum partial mRNA for putative V-type H+-ATPase catalytic subunit A Length = 777 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 542 atgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaa 601 |||||||||||||||||||||||||||||||| ||||| |||| || ||||| |||||| Sbjct: 776 atgttgcgcatcatccaaacagatttgtagaaagggcagaacttatcatatggcgtaaaa 717 Query: 602 gcgttctgtgc 612 || || ||||| Sbjct: 716 gcattttgtgc 706
>dbj|AB189963.1| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2236 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 548 cgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttc 607 ||||||||||| || || |||||||||||||| ||||||| ||||| ||||| |||||| Sbjct: 1703 cgcatcatccagacggacttgtagaatgggcagaacttgtcatatggagtaaatgcgttc 1644 Query: 608 tgtgccaaataatcttccctca 629 ||||| | |||||| ||||||| Sbjct: 1643 tgtgcaagataatcctccctca 1622 Score = 40.1 bits (20), Expect = 8.6 Identities = 80/100 (80%) Strand = Plus / Minus Query: 350 aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 409 ||||| ||||||| ||||| ||||| || ||||| | ||||| ||||| || || || Sbjct: 1901 aggtcctcgtatagcttcttaaattttgccacaagagcttcttccccttcagccggatcc 1842 Query: 410 tcgaacttttgggatacaaggcggtaaaatagatcaccca 449 || |||||||| || || ||||||||||| ||||| |||| Sbjct: 1841 tcaaacttttgagacactaggcggtaaaagagatctccca 1802
>gb|BT014583.1| Lycopersicon esculentum clone 134040F, mRNA sequence Length = 2415 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 542 atgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaa 601 |||||||||| ||||||||||||||||||||| ||||| |||| || ||||| |||||| Sbjct: 1753 atgttgcgcaacatccaaacagatttgtagaaagggcagaacttatcatatggcgtaaaa 1694 Query: 602 gcgttctgtgc 612 || || ||||| Sbjct: 1693 gcattttgtgc 1683
>gb|AY177247.1| Lycopersicon esculentum vacuolar H+-ATPase A1 subunit isoform mRNA, complete cds Length = 2370 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 542 atgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaa 601 |||||||||| ||||||||||||||||||||| ||||| |||| || ||||| |||||| Sbjct: 1714 atgttgcgcaacatccaaacagatttgtagaaagggcagaacttatcatatggcgtaaaa 1655 Query: 602 gcgttctgtgc 612 || || ||||| Sbjct: 1654 gcattttgtgc 1644
>gb|U15604.1|BNU15604 Brassica napus tonoplast ATPase 70 kDa subunit mRNA, complete cds Length = 2201 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 501 ctcgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatccaaa 560 |||||||||| |||||||| |||| | | ||| || |||||||| ||||||||||| | Sbjct: 1723 ctcgctccaccgcctgattggctaggttgtagaagtggataatgttacgcatcatccaca 1664 Query: 561 cagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgtt 606 |||| |||||||| ||||| ||||||| ||||| || |||||||| Sbjct: 1663 cagacttgtagaaagggcagaacttgtcatatggtgtgaaagcgtt 1618
>gb|J03769.1|DARVHATPA Daucus carota 70kD vacuolar H+-ATPase mRNA, complete cds Length = 2397 Score = 65.9 bits (33), Expect = 2e-07 Identities = 110/133 (82%), Gaps = 2/133 (1%) Strand = Plus / Minus Query: 496 agctgctcgctccacagcctgattcgcta-attgattgaaatgaataatgttgcgcatca 554 |||| ||||||||||||||||||| || | |||| | ||||| ||||| |||||||||| Sbjct: 1839 agctcctcgctccacagcctgattggccagattg-taaaaatggataatattgcgcatca 1781 Query: 555 tccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttctgtgcca 614 |||||||||| ||||| || || ||| | ||||| ||||| ||||| || ||||| || | Sbjct: 1780 tccaaacagacttgtaaaaaggacaaaatttgtcatatggagtaaatgcattctgggcaa 1721 Query: 615 aataatcttccct 627 |||||| ||||| Sbjct: 1720 gataatcctccct 1708
>dbj|AB036926.1| Citrus unshiu Cit-VATP A-1 gene for vacuolar H+-ATPase A subunit, partial cds Length = 3431 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtc 588 |||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 2813 gaaatggataatgttacgcatcatccaaacagacttgtagaaagggcagaacttgtc 2757
>gb|AF367445.1| Prunus persica clone AtpvA1 V-ATPase catalytic subunit A (atpvA1) mRNA, complete cds Length = 2336 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 534 aatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatg 593 ||||||| || || ||||||||||||||||| |||||||| ||||| | ||||| |||| Sbjct: 1784 aatgaatgatattccgcatcatccaaacagacttgtagaacgggcagaatttgtcatatg 1725 Query: 594 gggtaaaagcgttctgtgccaaataatc 621 | ||||| || |||||||| | |||||| Sbjct: 1724 gagtaaatgcattctgtgcgagataatc 1697 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 389 tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 448 ||||| |||||||| || || || || ||||| || |||||||||||||| ||||| ||| Sbjct: 1929 tcttccccttctgccggatcctcaaatttttgtgacacaaggcggtaaaagagatctccc 1870 Query: 449 a 449 | Sbjct: 1869 a 1869
>dbj|AB189964.1| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2322 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 548 cgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaaagcgttc 607 ||||||||||| || || |||||||||||||| ||||||| ||||| ||||| || ||| Sbjct: 1788 cgcatcatccagacggacttgtagaatgggcagaacttgtcatatggagtaaatgcattc 1729 Query: 608 tgtgccaaataatcttccctca 629 || || | |||||| ||||||| Sbjct: 1728 tgagcaagataatcctccctca 1707 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 389 tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 448 ||||| |||||||| || || || ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1947 tcttccccttctgccggatcctcaaacttttgggacactaggcggtaaaagagatctccc 1888 Query: 449 a 449 | Sbjct: 1887 a 1887
>gb|U26709.1|VRU26709 Vigna radiata vacuolar H+-ATPase subunit A mRNA, complete cds Length = 2371 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 533 aaatgaataatgttgcgcatcatccaaacagatttgtagaa 573 ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1733 aaatggataatgttacgcatcatccaaacagacttgtagaa 1693
>ref|NM_101543.2| Arabidopsis thaliana unknown protein AT1G16820 mRNA, complete cds Length = 1073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtag 571 ||||||||||||||| ||||||||||| || ||||||||| Sbjct: 159 gaaatgaataatgttacgcatcatccacacggatttgtag 120
>gb|BT005755.1| Arabidopsis thaliana clone RAFL15-46-D24 (R50159) unknown protein (At1g16820) mRNA, complete cds Length = 1282 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtag 571 ||||||||||||||| ||||||||||| || ||||||||| Sbjct: 778 gaaatgaataatgttacgcatcatccacacggatttgtag 739
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtag 571 ||||||||||||||| ||||||||||| || ||||||||| Sbjct: 43437 gaaatgaataatgttacgcatcatccacacggatttgtag 43398
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtag 571 ||||||||||||||| ||||||||||| || ||||||||| Sbjct: 90134 gaaatgaataatgttacgcatcatccacacggatttgtag 90095
>ref|NM_001036222.1| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.2 mRNA, complete cds Length = 2512 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1915 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1856 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1855 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1818
>ref|NM_106539.3| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.1 mRNA, complete cds Length = 2373 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1776 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1717 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1716 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1679
>gb|BT008383.1| Arabidopsis thaliana At1g78900 gene, complete cds Length = 1872 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1650 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1591 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1590 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1553
>gb|AY081296.1| Arabidopsis thaliana ATPase subunit A mRNA, complete cds Length = 2314 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1775 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1716 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1715 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1678
>gb|AY059909.1| Arabidopsis thaliana vacuolar type ATPase subunit A (F9K20.5) mRNA, complete cds Length = 2248 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1775 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1716 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1715 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1678
>dbj|AK221853.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit A, complete cds, clone: RAFL22-08-A11 Length = 1319 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 769 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 710 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 709 tggtgtaaacgcgttttgagcaaggtaatcttccctca 672
>emb|BX817720.1|CNS0AALL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2261 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1755 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1696 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1695 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1658
>gb|AY085759.1| Arabidopsis thaliana clone 17815 mRNA, complete sequence Length = 2314 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1775 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1716 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1715 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1678
>gb|BT002589.1| Arabidopsis thaliana vacuolar type ATPase subunit A (At1g78900) mRNA, complete cds Length = 1927 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1650 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1591 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1590 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1553
>gb|U65638.1|ATU65638 Arabidopsis thaliana vacuolar type ATPase subunit A mRNA, complete cds Length = 2283 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgta 591 |||||| |||||||| ||||||||||| || || |||||||| || || | ||||| || Sbjct: 1678 gaaatggataatgttacgcatcatccacacggacttgtagaaaggacagaatttgtcata 1619 Query: 592 tggggtaaaagcgttctgtgccaaataatcttccctca 629 ||| ||||| ||||| || || | ||||||||||||| Sbjct: 1618 tggtgtaaacgcgttttgagcaaggtaatcttccctca 1581
>emb|AJ276326.1|MCR276326 Mesembryanthemum crystallinum mRNA for putative vacuolar ATP synthase subunit A (vatA gene) Length = 2396 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 503 cgctccacagcctgattcgctaattgattgaaatgaataatgttgcgcatcatcca 558 |||||||| |||| ||| || || | || ||||||||| ||||||||||||||||| Sbjct: 1833 cgctccaccgccttattagccaaattatagaaatgaatgatgttgcgcatcatcca 1778 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 356 tcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaac 415 ||||| |||||||||||||| ||||| || |||||| ||||| || ||||| ||||| Sbjct: 1980 tcgtacaacttctggaattttgcgacgagagtgtcttctccttcagcagggtcctcgaat 1921 Query: 416 ttttg 420 ||||| Sbjct: 1920 ttttg 1916
>ref|XM_807653.1| Trypanosoma cruzi strain CL Brener V-type ATPase, A subunit (Tc00.1047053506405.120) partial mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 541 aatgttgcgcatcatccaaacagatttgtagaatgggcaatacttgtcgtatggggtaaa 600 ||||||||||| ||||||| | ||| || | ||||||| |||||||||| |||||||| Sbjct: 1617 aatgttgcgcagcatccaacacgttttataaagtgggcaaaacttgtcgtaaggggtaaa 1558 Query: 601 agcgtt 606 ||||| Sbjct: 1557 ggcgtt 1552
>gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complete sequence Length = 54264 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 ataatgtaaaatcctgaaaaaa 150 |||||||||||||||||||||| Sbjct: 28728 ataatgtaaaatcctgaaaaaa 28707
>dbj|AK220704.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit A, complete cds, clone: RAFL21-99-K21 Length = 648 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaa 573 |||||| |||||||| ||||||||||| || || |||||||| Sbjct: 98 gaaatggataatgttacgcatcatccacacggacttgtagaa 57
>gb|DQ056751.1| Vigna unguiculata vacuolar H+-ATPase subunit A mRNA, partial cds Length = 1125 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 548 cgcatcatccaaacagatttgtagaa 573 ||||||||||||||||| |||||||| Sbjct: 1125 cgcatcatccaaacagacttgtagaa 1100
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Plus Query: 532 gaaatgaataatgttgcgcatcatccaaacagatttgtagaa 573 |||||| |||||||| ||||||||||| || || |||||||| Sbjct: 13726 gaaatggataatgttacgcatcatccacacggacttgtagaa 13767
>emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chromosome 6 Contains a novel gene, complete sequence Length = 94555 Score = 42.1 bits (21), Expect = 2.2 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 71 acaaataatggtacacatggggaaaaataatgg 103 ||||||||||||| |||||| |||||||||||| Sbjct: 50582 acaaataatggta-acatggagaaaaataatgg 50613
>gb|AC016822.9| Homo sapiens chromosome 10 clone RP11-430K23, complete sequence Length = 172367 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 taattgattgaaatgaataat 543 ||||||||||||||||||||| Sbjct: 19045 taattgattgaaatgaataat 19065
>ref|XM_632049.1| Dictyostelium discoideum ABC transporter C family protein (DDB0219975), partial mRNA Length = 4056 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 attgattgaaatgaataatgttgc 548 |||| ||||||||||||||||||| Sbjct: 3072 attgtttgaaatgaataatgttgc 3049
>gb|AC147771.1| Homo sapiens chromosome 16 clone PCR-16A03, complete sequence Length = 8715 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aacaaataatggtacacatg 89 |||||||||||||||||||| Sbjct: 4345 aacaaataatggtacacatg 4326
>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence Length = 191762 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acatggggaaaaataatggc 104 |||||||||||||||||||| Sbjct: 108085 acatggggaaaaataatggc 108066
>gb|AC090042.2| Homo sapiens chromosome 3 clone RP11-21B12 map 3p, complete sequence Length = 167559 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggtacacatggggaaaaata 99 |||||||||||||||||||| Sbjct: 135620 ggtacacatggggaaaaata 135601
>gb|AF098501.2| Caenorhabditis elegans fosmid H28G03, complete sequence Length = 44352 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcttgcatcctggcgctgga 122 |||||||||||||||||||| Sbjct: 18371 gcttgcatcctggcgctgga 18352
>emb|X07160.1|GMHSP185 Soybean gene for heat shock protein Gmhsp18.5-C (class I) Length = 1833 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ctctggtgaagcaaaagcaaattg 235 ||||||| |||||||||||||||| Sbjct: 1377 ctctggttaagcaaaagcaaattg 1400
>emb|AL591980.1| Listeria monocytogenes strain EGD, complete genome, segment 8/12 Length = 103050 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gttaagtagatggacatcgt 25 |||||||||||||||||||| Sbjct: 79319 gttaagtagatggacatcgt 79300
>gb|AF474338.1| Dictyostelium discoideum ABC transporter ABCC.6 (abcC6) gene, complete cds Length = 4775 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 attgattgaaatgaataatgttgc 548 |||| ||||||||||||||||||| Sbjct: 3713 attgtttgaaatgaataatgttgc 3690
>emb|CR391627.1| Gallus gallus finished cDNA, clone ChEST893o3 Length = 1074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 aaaacaaggctgtctgtctg 166 |||||||||||||||||||| Sbjct: 747 aaaacaaggctgtctgtctg 728
>ref|NM_171682.1| Caenorhabditis elegans H28G03.1b (H28G03.1) mRNA, complete cds Length = 948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcttgcatcctggcgctgga 122 |||||||||||||||||||| Sbjct: 445 gcttgcatcctggcgctgga 426
>ref|NM_171950.3| Caenorhabditis elegans H28G03.1c (H28G03.1) mRNA, complete cds Length = 2116 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcttgcatcctggcgctgga 122 |||||||||||||||||||| Sbjct: 534 gcttgcatcctggcgctgga 515
>ref|NM_171681.2| Caenorhabditis elegans H28G03.1a (H28G03.1) mRNA, complete cds Length = 1046 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcttgcatcctggcgctgga 122 |||||||||||||||||||| Sbjct: 543 gcttgcatcctggcgctgga 524 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,859,146 Number of Sequences: 3902068 Number of extensions: 5859146 Number of successful extensions: 124118 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123892 Number of HSP's gapped (non-prelim): 212 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)