ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37o20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108904.1| Zea mays PCO090377 mRNA sequence Length = 650 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 524 ctgaggaacaaaccaacggagaagtctcatcctctgacaaaactgatgtgccaggaatgt 583 |||| ||||||||||| | ||| |||||||||||| |||| | ||| |||| |||| Sbjct: 328 ctgaagaacaaaccaatgaagagttctcatcctctgccaaagcacttgtatcagggatgt 269 Query: 584 caaatactggctgtggtgtacgcctgtacttgtgccgggctgaatagaatttgtaatctc 643 ||||| ||| |||||| | ||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 268 caaatgctgcctgtggggaacgcctgatcttatgccggggtgaatagaatttgtaatctc 209 Query: 644 ttga 647 |||| Sbjct: 208 ttga 205 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 211 ccacattcgtcacaaaacttcgcaggcctgcttggaagaatattcaagcgtcctccaggg 270 ||||| || ||||| ||||||||||| ||| |||||| ||||| || |||||||||| | Sbjct: 644 ccacactcatcacagaacttcgcagggctggttggaataatatgcatgcgtcctccaaga 585 Query: 271 tggctgtgtccagcttgcatggaagatagatgcggagataaataagactggtgctg 326 || | || ||| |||||| | |||||| ||| |||||||||||| ||| ||||| Sbjct: 584 tgaccttgcccaacttgcaagcaagatatatgttgagataaataagcctgttgctg 529
>ref|NM_126275.2| Arabidopsis thaliana unknown protein AT2G02150 mRNA, complete cds Length = 3554 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 atccctagcctcttggtgccacactctgagcagaacttggatgtc 192 ||||| || ||||||| ||||||||||||||||| ||||||||| Sbjct: 3422 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 3378
>gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map CIC11A04, complete sequence Length = 93212 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 atccctagcctcttggtgccacactctgagcagaacttggatgtc 192 ||||| || ||||||| ||||||||||||||||| ||||||||| Sbjct: 38866 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 38822
>dbj|AK221550.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-76-K07 Length = 1625 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 atccctagcctcttggtgccacactctgagcagaacttggatgtc 192 ||||| || ||||||| ||||||||||||||||| ||||||||| Sbjct: 1389 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 1345
>emb|BX820850.1|CNS0A9I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1576 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 atccctagcctcttggtgccacactctgagcagaacttggatgtc 192 ||||| || ||||||| ||||||||||||||||| ||||||||| Sbjct: 1398 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 1354
>gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179419 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 572 tgccaggaatgtcaaatactgg 593 |||||||||||||||||||||| Sbjct: 89783 tgccaggaatgtcaaatactgg 89762
>gb|AC006204.1| Homo sapiens PAC clone RP5-1102B4 from 7, complete sequence Length = 144563 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 aaattccttaattatgcattactca 143 |||||||||||||||| |||||||| Sbjct: 135077 aaattccttaattatgtattactca 135101
>emb|AL136089.15| Human DNA sequence from clone RP1-278E11 on chromosome 6 Contains the 3' end of the novel gene KIAA0381, the MOCS1 gene for molybdenum cofactor synthesis 1, a pseudogene similar to 60S ribosomal protein L23 (RPL23) and a pseudogene similar to tubulin beta chain (TUBB), complete sequence Length = 99479 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 ttccttaattatgcattactc 142 ||||||||||||||||||||| Sbjct: 17108 ttccttaattatgcattactc 17088
>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence Length = 135689 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 577 ggaatgtcaaatactggctgt 597 ||||||||||||||||||||| Sbjct: 47735 ggaatgtcaaatactggctgt 47715
>gb|BC102857.1| Bos taurus antigen CD3D, delta polypeptide (TiT3 complex), mRNA (cDNA clone MGC:127796 IMAGE:7954758), complete cds Length = 1494 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccagggtggctgtgtccagct 285 ||||||||||||||||||||| Sbjct: 335 ccagggtggctgtgtccagct 315
>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence Length = 184194 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 577 ggaatgtcaaatactggctgt 597 ||||||||||||||||||||| Sbjct: 102163 ggaatgtcaaatactggctgt 102143
>emb|AJ293578.1|HSA293578 Homo sapiens partial MOCS1 gene, exons 2-8 Length = 17572 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ttccttaattatgcattactc 142 ||||||||||||||||||||| Sbjct: 8215 ttccttaattatgcattactc 8235
>ref|NM_001034033.1| Bos taurus antigen CD3D, delta polypeptide (TiT3 complex) (CD3D), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccagggtggctgtgtccagct 285 ||||||||||||||||||||| Sbjct: 335 ccagggtggctgtgtccagct 315
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggttctgcatcatggccgaaacaa 103 ||||||||| |||||||||||||| Sbjct: 1181119 ggttctgcaccatggccgaaacaa 1181096
>ref|XM_466225.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 2254 tgttggttttgctgaatggc 2273
>ref|XM_515601.1| PREDICTED: Pan troglodytes LOC459381 (LOC459381), mRNA Length = 2186 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 345 cttcgcaggcctgcttggaa 326
>ref|XM_615671.2| PREDICTED: Bos taurus similar to anaphase promoting complex subunit 1 (LOC535565), partial mRNA Length = 3573 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 853 cttcgcaggcctgcttggaa 834
>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete sequence Length = 206103 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 127224 cttcgcaggcctgcttggaa 127243
>gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chromosome 2, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 15726 cttcgcaggcctgcttggaa 15745
>ref|XM_532958.2| PREDICTED: Canis familiaris similar to anaphase promoting complex subunit 1 (LOC475750), mRNA Length = 6085 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 2965 cttcgcaggcctgcttggaa 2946
>ref|XM_744527.1| Aspergillus fumigatus Af293 methyltransferase (Afu2g04890) partial mRNA Length = 1017 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 agtatgttggttttgctgaa 406 |||||||||||||||||||| Sbjct: 69 agtatgttggttttgctgaa 50
>gb|BC030543.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone IMAGE:4998908), **** WARNING: chimeric clone **** Length = 2104 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 688 cttcgcaggcctgcttggaa 669
>gb|BC033072.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone IMAGE:3843009), **** WARNING: chimeric clone **** Length = 2248 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 810 cttcgcaggcctgcttggaa 791
>gb|AC122826.4| Mus musculus BAC clone RP23-209L3 from chromosome 18, complete sequence Length = 197208 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 aaactctgaggaacaaacca 538 |||||||||||||||||||| Sbjct: 95514 aaactctgaggaacaaacca 95533
>ref|XM_843746.1| PREDICTED: Canis familiaris similar to Myosin regulatory light chain 2, nonsarcomeric (Myosin RLC), transcript variant 1 (LOC607207), mRNA Length = 1204 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aggcctgcttggaagaatat 253 |||||||||||||||||||| Sbjct: 13 aggcctgcttggaagaatat 32
>gb|BC011756.1| Homo sapiens cDNA clone IMAGE:3531245, **** WARNING: chimeric clone **** Length = 2219 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 784 cttcgcaggcctgcttggaa 765
>gb|BC013972.1| Homo sapiens cDNA clone IMAGE:4137637, **** WARNING: chimeric clone **** Length = 2219 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 784 cttcgcaggcctgcttggaa 765
>gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromosome 2, complete sequence Length = 183714 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 83569 cttcgcaggcctgcttggaa 83588
>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence Length = 187352 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaattccttaattatgcatt 138 |||||||||||||||||||| Sbjct: 76893 aaattccttaattatgcatt 76874
>dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 gene for chloride channel, paritial cds Length = 6803 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 5113 tgttggttttgctgaatggc 5132
>dbj|AB069967.1| Oryza sativa (japonica cultivar-group) OsCLC-2 mRNA for chloride channel, partial cds Length = 2539 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 1865 tgttggttttgctgaatggc 1884
>gb|AY855346.1| Clostridium difficile bacteriophage phi CD119, complete genome Length = 53325 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ttcagttacaacaaccaaaa 56 |||||||||||||||||||| Sbjct: 34702 ttcagttacaacaaccaaaa 34721
>dbj|AK023807.1| Homo sapiens cDNA FLJ13745 fis, clone PLACE3000244, highly similar to PROTEIN TSG24 (MEIOTIC CHECK POINT REGULATOR) Length = 4534 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 1441 cttcgcaggcctgcttggaa 1422
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tatgcattactcatcagatc 150 |||||||||||||||||||| Sbjct: 1995667 tatgcattactcatcagatc 1995648
>gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, complete sequence Length = 213865 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 151904 cttcgcaggcctgcttggaa 151923
>ref|NM_022662.2| Homo sapiens anaphase promoting complex subunit 1 (ANAPC1), mRNA Length = 6329 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 3215 cttcgcaggcctgcttggaa 3196
>ref|NM_001012626.1| Homo sapiens hypothetical protein LOC285074 (LOC285074), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 576 cttcgcaggcctgcttggaa 557
>ref|XM_496557.2| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 1 (RGPD1), mRNA Length = 456 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 394 cttcgcaggcctgcttggaa 375
>ref|XM_935054.1| PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1, transcript variant 3 (LOC653663), mRNA Length = 1765 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 480 cttcgcaggcctgcttggaa 461
>ref|XM_930490.1| PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1, transcript variant 2 (LOC653663), mRNA Length = 1962 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 480 cttcgcaggcctgcttggaa 461
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 21171381 tgttggttttgctgaatggc 21171362
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ttcagttacaacaaccaaaa 56 |||||||||||||||||||| Sbjct: 1428184 ttcagttacaacaaccaaaa 1428165
>gb|AC125232.4| Homo sapiens BAC clone RP11-1252D15 from 2, complete sequence Length = 43275 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 34199 cttcgcaggcctgcttggaa 34218
>gb|AC008068.4| Homo sapiens BAC clone RP11-334F17 from 2, complete sequence Length = 154036 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aggaagagtgaactcaactt 38 |||||||||||||||||||| Sbjct: 72452 aggaagagtgaactcaactt 72471
>gb|AC092651.3| Homo sapiens BAC clone RP11-431O23 from 2, complete sequence Length = 96153 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 81069 cttcgcaggcctgcttggaa 81050
>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence Length = 192494 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 61523 cttcgcaggcctgcttggaa 61504
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ttcagttacaacaaccaaaa 56 |||||||||||||||||||| Sbjct: 126235 ttcagttacaacaaccaaaa 126216
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 78097 tgttggttttgctgaatggc 78078
>gb|BC069048.1| Homo sapiens hypothetical protein LOC285074, mRNA (cDNA clone IMAGE:4111322), complete cds Length = 2007 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 576 cttcgcaggcctgcttggaa 557
>emb|AJ278357.1|HSA278357 Homo sapiens mRNA for Tsg24 protein Length = 6282 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 3230 cttcgcaggcctgcttggaa 3211
>dbj|AK069669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O13, full insert sequence Length = 2927 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 2254 tgttggttttgctgaatggc 2273
>gb|BC104904.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone MGC:132564 IMAGE:8143907), complete cds Length = 5902 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 3017 cttcgcaggcctgcttggaa 2998
>gb|BC104902.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone MGC:132562 IMAGE:8143905), complete cds Length = 5902 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 3017 cttcgcaggcctgcttggaa 2998
>dbj|AK066353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B06, full insert sequence Length = 3084 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 2403 tgttggttttgctgaatggc 2422
>dbj|AK062032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H01, full insert sequence Length = 1358 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tgttggttttgctgaatggc 410 |||||||||||||||||||| Sbjct: 684 tgttggttttgctgaatggc 703
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tctcatcctctgacaaaact 567 |||||||||||||||||||| Sbjct: 199683 tctcatcctctgacaaaact 199702
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggctgtgtccagcttgcat 290 |||||||||||||||||||| Sbjct: 2153116 tggctgtgtccagcttgcat 2153097
>emb|AL832013.1|HSM803320 Homo sapiens mRNA; cDNA DKFZp451E124 (from clone DKFZp451E124) Length = 5055 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttcgcaggcctgcttggaa 247 |||||||||||||||||||| Sbjct: 1571 cttcgcaggcctgcttggaa 1552
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ttcagttacaacaaccaaaa 56 |||||||||||||||||||| Sbjct: 77805 ttcagttacaacaaccaaaa 77786 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,503,576 Number of Sequences: 3902068 Number of extensions: 5503576 Number of successful extensions: 95194 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95005 Number of HSP's gapped (non-prelim): 187 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
