>ref|XM_479268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5904

 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/161 (83%)
 Strand = Plus / Minus

                                                                        
Query: 587  ctcgtccatctccatcatcttctgctggaggttgtccttctccatctgtagcatttcgtt 646
            ||||||||| ||||| ||| |||| || ||||| || |||||||||||||  ||| ||||
Sbjct: 5706 ctcgtccatttccatgatcctctgttgaaggttatctttctccatctgtaaaattccgtt 5647

                                                                        
Query: 647  ctgggcctcgagcatctgctcccgctgctcgagctgttccacgagcagctgggtctncag 706
            |||||| || ||||| |||||||| ||||| |||||||| | |||||| ||| ||| || 
Sbjct: 5646 ctgggcttcaagcatttgctcccgttgctcaagctgttctatgagcagttggctctccaa 5587

                                                     
Query: 707  caggtccgccttncgttggtccatgtcgtcaagcaagctgt 747
            || ||||||||| | ||||||||| || |||| ||||||||
Sbjct: 5586 caagtccgcctttctttggtccatatcatcaaacaagctgt 5546



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 461  cgcgtgggacaccagcatgtccgactgcgccagcctcctgctgaa 505
            ||||||||| |  ||||| ||||| || |||||||||||||||||
Sbjct: 5838 cgcgtgggagagaagcatatccgattgagccagcctcctgctgaa 5794

>dbj|AK060298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F07, full
            insert sequence
          Length = 1537

 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/161 (83%)
 Strand = Plus / Minus

                                                                        
Query: 587  ctcgtccatctccatcatcttctgctggaggttgtccttctccatctgtagcatttcgtt 646
            ||||||||| ||||| ||| |||| || ||||| || |||||||||||||  ||| ||||
Sbjct: 1009 ctcgtccatttccatgatcctctgttgaaggttatctttctccatctgtaaaattccgtt 950

                                                                        
Query: 647  ctgggcctcgagcatctgctcccgctgctcgagctgttccacgagcagctgggtctncag 706
            |||||| || ||||| |||||||| ||||| |||||||| | |||||| ||| ||| || 
Sbjct: 949  ctgggcttcaagcatttgctcccgttgctcaagctgttctatgagcagttggctctccaa 890

                                                     
Query: 707  caggtccgccttncgttggtccatgtcgtcaagcaagctgt 747
            || ||||||||| | ||||||||| || |||| ||||||||
Sbjct: 889  caagtccgcctttctttggtccatatcatcaaacaagctgt 849



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 461  cgcgtgggacaccagcatgtccgactgcgccagcctcctgctgaa 505
            ||||||||| |  ||||| ||||| || |||||||||||||||||
Sbjct: 1141 cgcgtgggagagaagcatatccgattgagccagcctcctgctgaa 1097

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 269      gagagagatggcgccggcgccgccgcc 295
                |||||||||||||||| ||||||||||
Sbjct: 42834933 gagagagatggcgccgccgccgccgcc 42834907

>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 269   gagagagatggcgccggcgccgccgcc 295
             |||||||||||||||| ||||||||||
Sbjct: 28667 gagagagatggcgccgccgccgccgcc 28641

>dbj|AK101688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059E20, full
           insert sequence
          Length = 2275

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 269 gagagagatggcgccggcgccgccgcc 295
           |||||||||||||||| ||||||||||
Sbjct: 32  gagagagatggcgccgccgccgccgcc 58

>dbj|AK063285.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D07, full
           insert sequence
          Length = 1995

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 269 gagagagatggcgccggcgccgccgcc 295
           |||||||||||||||| ||||||||||
Sbjct: 31  gagagagatggcgccgccgccgccgcc 57

>gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.998_F_8, complete sequence
          Length = 175066

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 186    aactttatatacatatactcataccac 212
              ||||||||||||||| |||||||||||
Sbjct: 122461 aactttatatacatagactcataccac 122487

>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0015A05, complete sequence
          Length = 127330

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 277   tggcgccggcgccgccgccacc 298
             ||||||||||||||||||||||
Sbjct: 80990 tggcgccggcgccgccgccacc 81011

>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J22, complete sequence
          Length = 173903

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 277   tggcgccggcgccgccgccacc 298
             ||||||||||||||||||||||
Sbjct: 42624 tggcgccggcgccgccgccacc 42645

>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 218     ccaacattttttcttttgcagc 239
               ||||||||||||||||||||||
Sbjct: 2674183 ccaacattttttcttttgcagc 2674204

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 218     ccaacattttttcttttgcagc 239
               ||||||||||||||||||||||
Sbjct: 1709110 ccaacattttttcttttgcagc 1709089

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 506     ctcgctgccggccgagcgctgg 527
               ||||||||||||||||||||||
Sbjct: 4351196 ctcgctgccggccgagcgctgg 4351175

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 277     tggcgccggcgccgccgccacc 298
               ||||||||||||||||||||||
Sbjct: 2596104 tggcgccggcgccgccgccacc 2596125



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 282      ccggcgccgccgccaccgatc 302
                |||||||||||||||||||||
Sbjct: 20955916 ccggcgccgccgccaccgatc 20955896

>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048I21, complete sequence
          Length = 137650

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   ccggcgccgccgccaccgatc 302
             |||||||||||||||||||||
Sbjct: 82694 ccggcgccgccgccaccgatc 82674

>ref|XM_450551.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1140

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 ggcgccggcgccgccgccacc 298
           |||||||||||||||||||||
Sbjct: 96  ggcgccggcgccgccgccacc 116

>ref|XM_478288.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 gcgccggcgccgccgccaccg 299
           |||||||||||||||||||||
Sbjct: 770 gcgccggcgccgccgccaccg 750

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 280     cgccggcgccgccgccaccga 300
               |||||||||||||||||||||
Sbjct: 1188868 cgccggcgccgccgccaccga 1188888

>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 280    cgccggcgccgccgccaccga 300
              |||||||||||||||||||||
Sbjct: 155035 cgccggcgccgccgccaccga 155055

>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 280    cgccggcgccgccgccaccga 300
              |||||||||||||||||||||
Sbjct: 202267 cgccggcgccgccgccaccga 202287

>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
             glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   cgccggcgccgccgccaccga 300
             |||||||||||||||||||||
Sbjct: 33770 cgccggcgccgccgccaccga 33790

>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial)
             genes
          Length = 60726

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 275   gatggcgccggcgccgccgccaccg 299
             |||||||||| ||||||||||||||
Sbjct: 50334 gatggcgccgccgccgccgccaccg 50310

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 276     atggcgccggcgccgccgcca 296
               |||||||||||||||||||||
Sbjct: 4077495 atggcgccggcgccgccgcca 4077515

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 278     ggcgccggcgccgccgccacc 298
               |||||||||||||||||||||
Sbjct: 9609966 ggcgccggcgccgccgccacc 9609946

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     tctcaactttatatacatata 202
               |||||||||||||||||||||
Sbjct: 8274929 tctcaactttatatacatata 8274909

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 461      cgcgtgggacaccagcatgtccgactgcgccagcctcctgctgaa 505
                ||||||||| |  ||||| ||||| || |||||||||||||||||
Sbjct: 26474750 cgcgtgggagagaagcatatccgattgagccagcctcctgctgaa 26474794



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 279      gcgccggcgccgccgccaccg 299
                |||||||||||||||||||||
Sbjct: 19015500 gcgccggcgccgccgccaccg 19015480

>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence
          Length = 177950

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   gcgccggcgccgccgccaccg 299
             |||||||||||||||||||||
Sbjct: 86723 gcgccggcgccgccgccaccg 86743

>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1340_C08
          Length = 192167

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 461   cgcgtgggacaccagcatgtccgactgcgccagcctcctgctgaa 505
             ||||||||| |  ||||| ||||| || |||||||||||||||||
Sbjct: 20021 cgcgtgggagagaagcatatccgattgagccagcctcctgctgaa 20065

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 499     tgctgaactcgctgccggccgagcg 523
               |||||||| ||||||||||||||||
Sbjct: 4623594 tgctgaacgcgctgccggccgagcg 4623570

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 412     gccgcggccgcgagctcgtcg 432
               |||||||||||||||||||||
Sbjct: 5956071 gccgcggccgcgagctcgtcg 5956051



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 283    cggcgccgccgccaccgatct 303
              |||||||||||||||||||||
Sbjct: 237194 cggcgccgccgccaccgatct 237214

>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0430F03
          Length = 183095

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 279    gcgccggcgccgccgccaccg 299
              |||||||||||||||||||||
Sbjct: 117485 gcgccggcgccgccgccaccg 117465

>gb|AC155646.4| Mus musculus 6 BAC RP24-195P20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 169883

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    ctttatatacatatactcata 208
              |||||||||||||||||||||
Sbjct: 136071 ctttatatacatatactcata 136051

>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   ggcgccggcgccgccgccacc 298
             |||||||||||||||||||||
Sbjct: 50063 ggcgccggcgccgccgccacc 50043

>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0682A06
          Length = 142023

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   tctcaactttatatacatata 202
             |||||||||||||||||||||
Sbjct: 15038 tctcaactttatatacatata 15018

>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1449_H02
          Length = 117860

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 182    tctcaactttatatacatata 202
              |||||||||||||||||||||
Sbjct: 107611 tctcaactttatatacatata 107591

>emb|BX901875.9| Zebrafish DNA sequence from clone DKEY-183J10 in linkage group 18,
             complete sequence
          Length = 47439

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   aaatatacacagacgacgcac 166
             |||||||||||||||||||||
Sbjct: 21375 aaatatacacagacgacgcac 21395

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 281     gccggcgccgccgccaccgat 301
               |||||||||||||||||||||
Sbjct: 4738309 gccggcgccgccgccaccgat 4738329

>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 593     catctccatcatcttctgctg 613
               |||||||||||||||||||||
Sbjct: 1334140 catctccatcatcttctgctg 1334160



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 497    cctgctgaactcgctgccggccgag 521
              |||||||| ||||||||||||||||
Sbjct: 379752 cctgctgatctcgctgccggccgag 379728


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,708,652
Number of Sequences: 3902068
Number of extensions: 7708652
Number of successful extensions: 188804
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 186347
Number of HSP's gapped (non-prelim): 2457
length of query: 747
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 724
effective length of database: 17,143,297,704
effective search space: 12411747537696
effective search space used: 12411747537696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)