| Clone Name | rbags38d16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... | 30 | 5.6 | 2 | CDR3_CANAL (O42690) Opaque-specific ABC transporter CDR3 | 29 | 9.6 |
|---|
>ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa| protein) Length = 201 Score = 30.0 bits (66), Expect = 5.6 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 292 RNLNDASPAQRPCDPSSYHESSD 360 ++LN ASP+ P DPSS H++ D Sbjct: 147 QSLNGASPSLTPSDPSSLHKNQD 169
>CDR3_CANAL (O42690) Opaque-specific ABC transporter CDR3| Length = 1501 Score = 29.3 bits (64), Expect = 9.6 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -2 Query: 615 HRGRATWLILPVVICLSQRLSHACASMNQFEL*NCEWL 502 HRG WLI+ ++ S L+ C S NQ W+ Sbjct: 1293 HRGVLMWLIMTLMFIYSSTLAQFCISWNQLADYAANWI 1330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,218,992 Number of Sequences: 219361 Number of extensions: 1841893 Number of successful extensions: 3836 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3836 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)