ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal2f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 466 bits (235), Expect = e-128 Identities = 388/439 (88%) Strand = Plus / Minus Query: 252 ttacaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgctcc 311 |||||||||||| ||| ||||||||| |||||||||||||||||| || |||||||| Sbjct: 1425 ttacaatatctttctagtctttaggtatgagtacatgatgaaaaatccagccactgctcc 1366 Query: 312 gactgctattccgccagtcgtcgcccaaaatgcccacgtgttgttctccaggtatgattt 371 ||| ||||||| ||||| ||||||||||||||||||| ||| |||| ||||| ||||| Sbjct: 1365 aactactattccaccagttgtcgcccaaaatgcccacgcgtttgtctcgaggtacgattt 1306 Query: 372 aaggttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgac 431 |||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||| || Sbjct: 1305 aaggttcatgccaaatattcctgcaattaatgctcctatggcgacgcagaatgttccaac 1246 Query: 432 ctgaagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaat 491 ||||||||||||||| |||||||||||||| |||| ||||| |||||||| || ||||| Sbjct: 1245 ctgaagaagcaactcaactctgcttacttcaagtctccgggagcttaagttgaccgcaat 1186 Query: 492 tgaatcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattc 551 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1185 tgaatcttccatttctcttgcagaatcaagaagtctctctgcttgaccatggattgattc 1126 Query: 552 acatctttgaagataattttccaatagcatttcaatttcttcctcttcctcttcggcaat 611 |||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||| Sbjct: 1125 acatctttgaagataattttccaacaacatttcaatttcttcctcttcttcttcagcaat 1066 Query: 612 atgcttctctaatggaacagaacattccatatcatcactcactttatccagcgtacaatt 671 ||||||||||| ||||| || || ||||| | |||||| | ||| || ||||| ||||| Sbjct: 1065 ctgcttctctaaaggaacggagcactccatgttatcacttaatttgtcgagcgtgcaatt 1006 Query: 672 tctccccataatgcatatt 690 ||| ||||| ||||||||| Sbjct: 1005 tcttcccattatgcatatt 987
>dbj|AK100086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B15, full insert sequence Length = 1922 Score = 462 bits (233), Expect = e-127 Identities = 389/441 (88%) Strand = Plus / Minus Query: 250 ttttacaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgct 309 |||||||||||||| ||| ||||||||| |||||||||||||||||| || |||||| Sbjct: 1596 ttttacaatatctttctagtctttaggtatgagtacatgatgaaaaatccagccactgct 1537 Query: 310 ccgactgctattccgccagtcgtcgcccaaaatgcccacgtgttgttctccaggtatgat 369 || ||| ||||||| ||||| ||||||||||||||||||| ||| |||| ||||| ||| Sbjct: 1536 ccaactactattccaccagttgtcgcccaaaatgcccacgcgtttgtctcgaggtacgat 1477 Query: 370 ttaaggttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccg 429 |||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||| Sbjct: 1476 ttaaggttcatgccaaatattcctgcaattaatgctcctatggcgacgcagaatgttcca 1417 Query: 430 acctgaagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgca 489 ||||||||||||||||| |||||||||||||| |||| ||||| |||||||| || ||| Sbjct: 1416 acctgaagaagcaactcaactctgcttacttcaagtctccgggagcttaagttgaccgca 1357 Query: 490 attgaatcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgat 549 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 1356 attgaatcttccatttctcttgcagaatcaagaagtctctctgcttgaccatggattgat 1297 Query: 550 tcacatctttgaagataattttccaatagcatttcaatttcttcctcttcctcttcggca 609 |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||| Sbjct: 1296 tcacatctttgaagataattttccaacaacatttcaatttcttcctcttcttcttcagca 1237 Query: 610 atatgcttctctaatggaacagaacattccatatcatcactcactttatccagcgtacaa 669 || ||||||||||| ||||| || || |||| | |||||| | ||| || ||||| ||| Sbjct: 1236 atctgcttctctaaaggaacggagcactccacgttatcacttaatttgtcgagcgtgcaa 1177 Query: 670 tttctccccataatgcatatt 690 ||||| ||||| ||||||||| Sbjct: 1176 tttcttcccattatgcatatt 1156
>gb|AY108859.1| Zea mays PCO061760 mRNA sequence Length = 468 Score = 301 bits (152), Expect = 2e-78 Identities = 278/320 (86%) Strand = Plus / Minus Query: 254 acaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgctccga 313 |||||||||||||| || |||| ||| ||| | || ||||||||| ||||||||||| | Sbjct: 331 acaatatcttcctagcccttagatacgagtatacgacgaaaaatccagctactgctccaa 272 Query: 314 ctgctattccgccagtcgtcgcccaaaatgcccacgtgttgttctccaggtatgatttaa 373 || ||||||| ||||||||| ||||||||||||||| || | ||||| |||||||||| Sbjct: 271 ctactattccaccagtcgtcacccaaaatgcccacgcatttgtttccagatatgatttaa 212 Query: 374 ggttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacct 433 | |||||||| ||||| ||||||||||| ||||||| ||| ||||| |||||||| || | Sbjct: 211 gattcatgccaaatattcctgcaattaatgctcctattgcaacgcaaaatgttcccactt 152 Query: 434 gaagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattg 493 |||| |||| ||||||||| |||||||| |||||||| |||||||||||||| | ||| | Sbjct: 151 gaagcagcagctccactctacttacttcaagtcgtcgagaacttaagttcacagaaatcg 92 Query: 494 aatcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcac 553 | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 91 agtcttccatctctcttgcagaattcagaagtctctctgcttgaccatggcatgattcac 32 Query: 554 atctttgaagataattttcc 573 ||| |||||||||||||||| Sbjct: 31 atcgttgaagataattttcc 12
>ref|NM_122188.2| Arabidopsis thaliana GMN10 AT5G22830 (GMN10) mRNA, complete cds Length = 2058 Score = 145 bits (73), Expect = 2e-31 Identities = 187/225 (83%) Strand = Plus / Minus Query: 375 gttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctg 434 ||||||||||||||| ||||| || | ||| || ||||| || || ||||| |||||||| Sbjct: 1283 gttcatgccgaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctg 1224 Query: 435 aagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattga 494 |||||||||||| | ||||| || || || | || ||||||| || || |||||||| Sbjct: 1223 aagaagcaactcgaacctgctgacctcaagcctccgagaacttagattgacagcaattga 1164 Query: 495 atcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcaca 554 ||||||||||| |||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct: 1163 gtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcatgactcaca 1104 Query: 555 tctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||| ||||| || ||||| |||||||| ||||| |||||||| Sbjct: 1103 tctttgcagatagttctccaagagcatttcgatttcctcctcttc 1059
>emb|BX831579.1|CNS09ZTT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1761 Score = 145 bits (73), Expect = 2e-31 Identities = 187/225 (83%) Strand = Plus / Minus Query: 375 gttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctg 434 ||||||||||||||| ||||| || | ||| || ||||| || || ||||| |||||||| Sbjct: 1401 gttcatgccgaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctg 1342 Query: 435 aagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattga 494 |||||||||||| | ||||| || || || | || ||||||| || || |||||||| Sbjct: 1341 aagaagcaactcgaacctgctgacctcaagcctccgagaacttagattgacagcaattga 1282 Query: 495 atcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcaca 554 ||||||||||| |||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct: 1281 gtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcatgactcaca 1222 Query: 555 tctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||| ||||| || ||||| |||||||| ||||| |||||||| Sbjct: 1221 tctttgcagatagttctccaagagcatttcgatttcctcctcttc 1177
>emb|BX831155.1|CNS09ZDX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1647 Score = 145 bits (73), Expect = 2e-31 Identities = 187/225 (83%) Strand = Plus / Minus Query: 375 gttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctg 434 ||||||||||||||| ||||| || | ||| || ||||| || || ||||| |||||||| Sbjct: 1272 gttcatgccgaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctg 1213 Query: 435 aagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattga 494 |||||||||||| | ||||| || || || | || ||||||| || || |||||||| Sbjct: 1212 aagaagcaactcgaacctgctgacctcaagcctccgagaacttagattgacagcaattga 1153 Query: 495 atcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcaca 554 ||||||||||| |||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct: 1152 gtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcatgactcaca 1093 Query: 555 tctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||| ||||| || ||||| |||||||| ||||| |||||||| Sbjct: 1092 tctttgcagatagttctccaagagcatttcgatttcctcctcttc 1048
>gb|AF322255.1|AF322255 Arabidopsis thaliana magnesium transporter protein (GMN10) mRNA, complete cds Length = 1672 Score = 145 bits (73), Expect = 2e-31 Identities = 187/225 (83%) Strand = Plus / Minus Query: 375 gttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctg 434 ||||||||||||||| ||||| || | ||| || ||||| || || ||||| |||||||| Sbjct: 1272 gttcatgccgaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctg 1213 Query: 435 aagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattga 494 |||||||||||| | ||||| || || || | || ||||||| || || |||||||| Sbjct: 1212 aagaagcaactcgaacctgctgacctcaagcctccgagaacttagattgacagcaattga 1153 Query: 495 atcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcaca 554 ||||||||||| |||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct: 1152 gtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcatgactcaca 1093 Query: 555 tctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||| ||||| || ||||| |||||||| ||||| |||||||| Sbjct: 1092 tctttgcagatagttctccaagagcatttcgatttcctcctcttc 1048
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 475 cttaagttcactgcaattgaatcttccatttctcttgcagaatcaagaagcctctctgct 534 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27000964 cttaagttgaccgcaattgaatcttccatttctcttgcagaatcaagaagtctctctgct 27000905 Query: 535 tgaccatggcatgattcacatct 557 ||||||||| |||||||||||| Sbjct: 27000904 tgaccatggattgattcacatct 27000882 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 391 cctgcaattaaagctcctactgcgacgcagaatgttccgacctgaagaagcaactccact 450 ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 27002317 cctgcaattaatgctcctatggcgacgcagaatgttccaacctgaagaagcaactcaact 27002258 Query: 451 ctgcttacttccagtc 466 ||||||||||| |||| Sbjct: 27002257 ctgcttacttcaagtc 27002242 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 250 ttttacaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgct 309 |||||||||||||| ||| ||||||||| |||||||||||||||||| || |||||| Sbjct: 27002670 ttttacaatatctttctagtctttaggtatgagtacatgatgaaaaatccagccactgct 27002611 Query: 310 ccgactgctattccgccagtcgtcgcccaaaatgcccac 348 || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 27002610 ccaactactattccaccagttgtcgcccaaaatgcccac 27002572 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 556 ctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 27000806 ctttgaagataattttccaacaacatttcaatttcttcctcttc 27000763 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 602 cttcggcaatatgcttctctaatggaacagaacattccatatcatcactcactttatcca 661 |||| ||||| ||||||||||| ||||| || || ||||| | |||||| | ||| || | Sbjct: 27000572 cttcagcaatctgcttctctaaaggaacggagcactccatgttatcacttaatttgtcga 27000513 Query: 662 gcgtacaatttctccccataatgcatatt 690 |||| |||||||| ||||| ||||||||| Sbjct: 27000512 gcgtgcaatttcttcccattatgcatatt 27000484 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 356 tctccaggtatgatttaaggttcatgccgaatat 389 |||| ||||| ||||||||||||||||| ||||| Sbjct: 27002468 tctcgaggtacgatttaaggttcatgccaaatat 27002435
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 475 cttaagttcactgcaattgaatcttccatttctcttgcagaatcaagaagcctctctgct 534 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27092287 cttaagttgaccgcaattgaatcttccatttctcttgcagaatcaagaagtctctctgct 27092228 Query: 535 tgaccatggcatgattcacatct 557 ||||||||| |||||||||||| Sbjct: 27092227 tgaccatggattgattcacatct 27092205 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 391 cctgcaattaaagctcctactgcgacgcagaatgttccgacctgaagaagcaactccact 450 ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 27093640 cctgcaattaatgctcctatggcgacgcagaatgttccaacctgaagaagcaactcaact 27093581 Query: 451 ctgcttacttccagtc 466 ||||||||||| |||| Sbjct: 27093580 ctgcttacttcaagtc 27093565 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 250 ttttacaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgct 309 |||||||||||||| ||| ||||||||| |||||||||||||||||| || |||||| Sbjct: 27093993 ttttacaatatctttctagtctttaggtatgagtacatgatgaaaaatccagccactgct 27093934 Query: 310 ccgactgctattccgccagtcgtcgcccaaaatgcccac 348 || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 27093933 ccaactactattccaccagttgtcgcccaaaatgcccac 27093895 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 556 ctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 27092129 ctttgaagataattttccaacaacatttcaatttcttcctcttc 27092086 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 602 cttcggcaatatgcttctctaatggaacagaacattccatatcatcactcactttatcca 661 |||| ||||| ||||||||||| ||||| || || ||||| | |||||| | ||| || | Sbjct: 27091895 cttcagcaatctgcttctctaaaggaacggagcactccatgttatcacttaatttgtcga 27091836 Query: 662 gcgtacaatttctccccataatgcatatt 690 |||| |||||||| ||||| ||||||||| Sbjct: 27091835 gcgtgcaatttcttcccattatgcatatt 27091807 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 356 tctccaggtatgatttaaggttcatgccgaatat 389 |||| ||||| ||||||||||||||||| ||||| Sbjct: 27093791 tctcgaggtacgatttaaggttcatgccaaatat 27093758
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 475 cttaagttcactgcaattgaatcttccatttctcttgcagaatcaagaagcctctctgct 534 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 58435 cttaagttgaccgcaattgaatcttccatttctcttgcagaatcaagaagtctctctgct 58494 Query: 535 tgaccatggcatgattcacatct 557 ||||||||| |||||||||||| Sbjct: 58495 tgaccatggattgattcacatct 58517 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 391 cctgcaattaaagctcctactgcgacgcagaatgttccgacctgaagaagcaactccact 450 ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 57082 cctgcaattaatgctcctatggcgacgcagaatgttccaacctgaagaagcaactcaact 57141 Query: 451 ctgcttacttccagtc 466 ||||||||||| |||| Sbjct: 57142 ctgcttacttcaagtc 57157 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 250 ttttacaatatcttcctatcctttaggtacttgtacatgatgaaaaatccggctactgct 309 |||||||||||||| ||| ||||||||| |||||||||||||||||| || |||||| Sbjct: 56729 ttttacaatatctttctagtctttaggtatgagtacatgatgaaaaatccagccactgct 56788 Query: 310 ccgactgctattccgccagtcgtcgcccaaaatgcccac 348 || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 56789 ccaactactattccaccagttgtcgcccaaaatgcccac 56827 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 556 ctttgaagataattttccaatagcatttcaatttcttcctcttc 599 |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 58593 ctttgaagataattttccaacaacatttcaatttcttcctcttc 58636 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 602 cttcggcaatatgcttctctaatggaacagaacattccatatcatcactcactttatcca 661 |||| ||||| ||||||||||| ||||| || || ||||| | |||||| | ||| || | Sbjct: 58827 cttcagcaatctgcttctctaaaggaacggagcactccatgttatcacttaatttgtcga 58886 Query: 662 gcgtacaatttctccccataatgcatatt 690 |||| |||||||| ||||| ||||||||| Sbjct: 58887 gcgtgcaatttcttcccattatgcatatt 58915 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 356 tctccaggtatgatttaaggttcatgccgaatat 389 |||| ||||| ||||||||||||||||| ||||| Sbjct: 56931 tctcgaggtacgatttaaggttcatgccaaatat 56964
>emb|BX815432.1|CNS0ABBE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1734 Score = 109 bits (55), Expect = 1e-20 Identities = 151/183 (82%) Strand = Plus / Minus Query: 375 gttcatgccgaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctg 434 ||||||||||||||| ||||| || | ||| || ||||| || || ||||| |||||||| Sbjct: 1363 gttcatgccgaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctg 1304 Query: 435 aagaagcaactccactctgcttacttccagtcgtcgggaacttaagttcactgcaattga 494 |||||||||||| | ||||| || || || | || ||||||| || || |||||||| Sbjct: 1303 aagaagcaactcgaacctgctgacctcaagcctccgagaacttagattgacagcaattga 1244 Query: 495 atcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcatgattcaca 554 ||||||||||| |||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct: 1243 gtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcatgactcaca 1184 Query: 555 tct 557 ||| Sbjct: 1183 tct 1181
>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17 Length = 86065 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 487 gcaattgaatcttccatttctcttgcagaatcaagaagcctctctgcttgaccatggcat 546 |||||||| ||||||||||| |||||||||| ||||| || |||||||| ||||||||| Sbjct: 24482 gcaattgagtcttccatttcctttgcagaatccagaagtctttctgcttgtccatggcat 24423 Query: 547 gattcacatct 557 || |||||||| Sbjct: 24422 gactcacatct 24412 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 384 gaatatccctgcaattaaagctcctactgcgacgcagaatgttccgacctgaagaagcaa 443 |||||| ||||| || | ||| || ||||| || || ||||| ||||||||||||||||| Sbjct: 24660 gaatatacctgcgatgagagcaccaactgcaacacaaaatgtaccgacctgaagaagcaa 24601 Query: 444 ctc 446 ||| Sbjct: 24600 ctc 24598
>dbj|D37887.1|CYIMYC1 Cyprinus carpio gene for c-Myc, complete cds Length = 8675 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctcttc 605 ||||||||||||||||||||||| Sbjct: 2474 tcaatttcttcctcttcctcttc 2452
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 629 cagaacattccatatcatcact 650 |||||||||||||||||||||| Sbjct: 826344 cagaacattccatatcatcact 826323
>ref|XM_707432.1| Candida albicans SC5314 hypothetical protein (CaO19.10959), mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 564 ataattttccaatagcatttcaatttcttc 593 ||||||||| |||| ||||||||||||||| Sbjct: 1020 ataattttctaataacatttcaatttcttc 991
>ref|XM_707402.1| Candida albicans SC5314 hypothetical protein (CaO19.3455), mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 564 ataattttccaatagcatttcaatttcttc 593 ||||||||| |||| ||||||||||||||| Sbjct: 1020 ataattttctaataacatttcaatttcttc 991
>gb|AC154581.2| Mus musculus BAC clone RP23-381G5 from chromosome 13, complete sequence Length = 200156 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 aatacttgctcccaagttggta 112 |||||||||||||||||||||| Sbjct: 13148 aatacttgctcccaagttggta 13169
>ref|XM_567749.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK02800) partial mRNA Length = 983 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 629 cagaacattccatatcatcact 650 |||||||||||||||||||||| Sbjct: 790 cagaacattccatatcatcact 769
>ref|XM_966520.1| PREDICTED: Tribolium castaneum similar to CG5815-PA, isoform A (LOC660271), mRNA Length = 1515 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctctt 604 |||||||||||||||||||||| Sbjct: 587 tcaatttcttcctcttcctctt 566
>emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in linkage group 20 Contains the gene for a novel protein (zgc:63952), the 3' end of the gene for a novel protein similar to mouse and human importin 4 (IPO4), three genes for transposase, a novel gene and six CpG islands, complete sequence Length = 190000 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tcacagtaacatcaataagttc 33 |||||||||||||||||||||| Sbjct: 156081 tcacagtaacatcaataagttc 156102
>gb|AC150299.3| Carollia perspicillata clone 309L9, complete sequence Length = 84151 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 568 ttttccaatagcatttcaatttcttcctcttcctcttc 605 |||||||||| |||||||||||| |||||||||||| Sbjct: 33105 ttttccaataagttttcaatttcttactcttcctcttc 33142
>emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chromosome 13, complete sequence Length = 255133 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 aatacttgctcccaagttggta 112 |||||||||||||||||||||| Sbjct: 95996 aatacttgctcccaagttggta 96017
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 568 ttttccaatagcatttcaatttcttcctcttcctcttc 605 |||||||||| |||||||||||| |||||||||||| Sbjct: 1012422 ttttccaataagttttcaatttcttactcttcctcttc 1012459 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 868633 tttcaatttcttgctcttcctcttc 868609 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 854951 tttcaatttcttgctcttcctcttc 854927 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 325127 tttcaatttcttgctcttcctcttc 325151 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 231746 tttcaatttcttgctcttcctcttc 231722 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctctt 604 |||||||||||| ||||||||||| Sbjct: 158107 tttcaatttcttgctcttcctctt 158084 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 ||||||||||| |||||||||||| Sbjct: 146978 ttcaatttcttgctcttcctcttc 146955
>ref|XM_635090.1| Dictyostelium discoideum hypothetical protein (DDB0218398), partial mRNA Length = 3396 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 33 aatttcttcctcttcctcttc 13
>gb|AC142558.3| Carollia perspicillata clone 36K12, complete sequence Length = 91925 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 19400 tttcaatttcttgctcttcctcttc 19424
>gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence Length = 116172 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 52217 tttcaatttcttgctcttcctcttc 52193 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 38535 tttcaatttcttgctcttcctcttc 38511
>gb|AC102157.12| Mus musculus chromosome 1, clone RP23-393K4, complete sequence Length = 220638 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 95869 aatttcttcctcttcctcttc 95849
>ref|XM_814557.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510463.140) partial mRNA Length = 1125 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 ||||| ||||||||||||||||||| Sbjct: 904 tttcattttcttcctcttcctcttc 880
>gb|AC124545.4| Mus musculus BAC clone RP23-272D9 from 7, complete sequence Length = 169442 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 120162 aatttcttcctcttcctcttc 120142
>ref|XM_645817.1| Entamoeba histolytica HM-1:IMSS WD repeat protein (192.t00005) partial mRNA Length = 3498 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctc 602 ||||||||||||||||||||| Sbjct: 3081 ttcaatttcttcctcttcctc 3061
>gb|AC138157.3| Carollia perspicillata clone 45N16, complete sequence Length = 114626 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 90645 tttcaatttcttgctcttcctcttc 90621 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctctt 604 |||||||||||| ||||||||||| Sbjct: 17006 tttcaatttcttgctcttcctctt 16983 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 ||||||||||| |||||||||||| Sbjct: 5877 ttcaatttcttgctcttcctcttc 5854
>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence Length = 121459 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcct 601 ||||||||||||||||||||| Sbjct: 10230 tttcaatttcttcctcttcct 10210
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aagtagcagagaaatacttgc 99 ||||||||||||||||||||| Sbjct: 155121 aagtagcagagaaatacttgc 155101
>ref|XM_966756.1| PREDICTED: Tribolium castaneum similar to CG1915-PC, isoform C (LOC660533), mRNA Length = 62558 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 19476 aatttcttcctcttcctcttc 19456
>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5 Length = 349607 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tcaataagttccatattttta 43 ||||||||||||||||||||| Sbjct: 73302 tcaataagttccatattttta 73282
>gb|AC157543.8| Mus musculus chromosome 1, clone RP23-271O17, complete sequence Length = 223464 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 68962 aatttcttcctcttcctcttc 68942
>emb|AL589735.12| Mouse DNA sequence from clone RP23-211M15 on chromosome 13 contains the gene for a novel protein similar to human RU2S or KIAA1154, a ribosomal protein L35A (RPL35A) pseudogene and two CpG islands, complete sequence Length = 199957 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 ||||| ||||||||||||||||||| Sbjct: 97182 tttcattttcttcctcttcctcttc 97158
>gb|AC105026.4| Homo sapiens chromosome 8, clone CTD-2152D24, complete sequence Length = 121171 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 ttccaatagcatttcaatttc 590 ||||||||||||||||||||| Sbjct: 105879 ttccaatagcatttcaatttc 105899
>gb|U65889.1|MAU65889 Mesocricetus auratus bone sialoprotein (BSP) mRNA, complete cds Length = 1900 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 ||||| ||||||||||||||||||| Sbjct: 526 tttcattttcttcctcttcctcttc 502
>ref|NM_074849.3| Caenorhabditis elegans T20B3.2 (Troponin) mRNA, complete cds Length = 928 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 784 ttcttcctcttcctcttcggc 764
>ref|XM_397111.2| PREDICTED: Apis mellifera similar to CG2010-PA, isoform A (LOC413670), mRNA Length = 1554 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 aatttcttcctcttcctcttc 605 ||||||||||||||||||||| Sbjct: 615 aatttcttcctcttcctcttc 595
>gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complete sequence Length = 194167 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 tttgaagataattttccaata 577 ||||||||||||||||||||| Sbjct: 35966 tttgaagataattttccaata 35986
>dbj|AB107359.1| Caenorhabditis elegans tni-3 gene for troponin I 3, complete cds Length = 6000 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 4495 ttcttcctcttcctcttcggc 4475
>gb|AC156357.3| Carollia perspicillata clone 84E8, complete sequence Length = 64472 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctcttc 605 |||||||||||| |||||||||||| Sbjct: 63177 tttcaatttcttgctcttcctcttc 63153 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcctctt 604 |||||||||||| ||||||||||| Sbjct: 53986 tttcaatttcttgctcttcctctt 53963 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 ||||||||||| |||||||||||| Sbjct: 42859 ttcaatttcttgctcttcctcttc 42836
>dbj|AB190673.1| Burkholderia cepacia gene for DNA-directed RNA polymerase subunit D, partial cds, strain: MAFF 302528 Length = 838 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 278 ttcttcctcttcctcttcggc 258
>dbj|AB190672.1| Burkholderia cepacia gene for DNA-directed RNA polymerase subunit D, partial cds, strain: ATCC 25416 Length = 838 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 278 ttcttcctcttcctcttcggc 258
>emb|Z81593.1|CET20B3 Caenorhabditis elegans Cosmid T20B3, complete sequence Length = 38563 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 22069 ttcttcctcttcctcttcggc 22089
>gb|AY193669.1| Lactuca serriola clone RA7 resistance protein RGC2-like gene, partial sequence Length = 1603 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggcaata 612 |||||||||||||||||| |||||| Sbjct: 1495 ttcttcctcttcctcttctgcaata 1471
>gb|AF095748.1|AF095748 Burkholderia cepacia principal sigma factor (sigA), phthalate dioxygenase reductase (ophA1), putative phthalate permease N-terminal region, putative phathalate permease C-terminal region (ophD), 4,5-dihydroxyphthalate decarboxylase (ophC), phthalate-inducible quinolinate phosphoribosyl transferase (ophE), transposase (tnp), phthalate dihydrodiol dehydrogenase (ophB), and phthalate dioxygenase (ophA2) genes, complete cds; and unknown gene Length = 13610 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttcttcctcttcctcttcggc 608 ||||||||||||||||||||| Sbjct: 714 ttcttcctcttcctcttcggc 694
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 577 agcatttcaatttcttcctcttcctcttc 605 ||||| |||| |||||||||||||||||| Sbjct: 525254 agcatatcaaattcttcctcttcctcttc 525282
>gb|AC109195.27| Mus musculus chromosome 15, clone RP24-212B11, complete sequence Length = 168270 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 98504 atttcttcctcttcctcttc 98523
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||| ||||||||||||||||||| Sbjct: 57565 ttcattttcttcctcttcctcttc 57542 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||| ||||||||||||||||||| Sbjct: 57416 ttcattttcttcctcttcctcttc 57393
>ref|XM_642384.1| Dictyostelium discoideum putative non-transporter ABC protein (DDB0191119), partial mRNA Length = 3429 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||||||||||| ||||||||||| Sbjct: 732 ttcaatttcttcttcttcctcttc 709
>ref|XM_639213.1| Dictyostelium discoideum hypothetical protein (DDB0167532), partial mRNA Length = 387 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 tgattcacatctttgaagat 565 |||||||||||||||||||| Sbjct: 357 tgattcacatctttgaagat 338
>ref|XM_630186.1| Dictyostelium discoideum hypothetical protein (DDB0183953), partial mRNA Length = 1569 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 530 atttcttcctcttcctcttc 511
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 tcttcctcttcctcttcggc 608 |||||||||||||||||||| Sbjct: 2526070 tcttcctcttcctcttcggc 2526089
>ref|NM_007190.2| Homo sapiens SEC23 interacting protein (SEC23IP), mRNA Length = 4243 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1567 gaaggaactccactctgcttactt 1544
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence Length = 225302 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 139000 atttcttcctcttcctcttc 139019
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 tttcttcctcttcctcttcg 606 |||||||||||||||||||| Sbjct: 364593 tttcttcctcttcctcttcg 364612
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 677504 atttcttcctcttcctcttc 677523
>gb|BC080630.1| Homo sapiens leprecan-like 2, mRNA (cDNA clone IMAGE:6376462), partial cds Length = 2458 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1955 atttcttcctcttcctcttc 1936
>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162977 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 84165 atttcttcctcttcctcttc 84184
>ref|XM_873246.1| PREDICTED: Bos taurus similar to SEC23-interacting protein (p125), transcript variant 6 (LOC508557), mRNA Length = 4552 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1520 gaaggaactccactctgcttactt 1497
>ref|XM_864399.1| PREDICTED: Bos taurus similar to SEC23-interacting protein (p125), transcript variant 3 (LOC508557), mRNA Length = 3077 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1520 gaaggaactccactctgcttactt 1497
>ref|XM_585349.2| PREDICTED: Bos taurus similar to SEC23-interacting protein (p125), transcript variant 1 (LOC508557), mRNA Length = 2800 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1520 gaaggaactccactctgcttactt 1497
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 14304 atttcttcctcttcctcttc 14285
>ref|XM_360743.1| Magnaporthe grisea 70-15 hypothetical protein (MG03286.4) partial mRNA Length = 3525 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 3230 atttcttcctcttcctcttc 3211
>ref|XM_460074.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E18568g) partial mRNA Length = 711 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 224 atttcttcctcttcctcttc 205
>gb|BC063800.1| Homo sapiens SEC23 interacting protein, mRNA (cDNA clone MGC:70759 IMAGE:6514739), complete cds Length = 4257 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1545 gaaggaactccactctgcttactt 1522
>ref|XM_586381.2| PREDICTED: Bos taurus similar to Leucyl-tRNA synthetase, cytoplasmic (Leucine--tRNA ligase) (LeuRS) (LOC509429), mRNA Length = 4043 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 665 atttcttcctcttcctcttc 646
>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence Length = 269784 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 15093 atttcttcctcttcctcttc 15112
>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence Length = 146274 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 100545 tcaatttcttcctcttcctc 100564
>gb|AY631872.1| Homo sapiens guanine nucleotide binding protein (G protein), beta polypeptide 3 (GNB3) gene, complete cds Length = 10429 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 391 atttcttcctcttcctcttc 372
>gb|BC067251.1| Homo sapiens leprecan-like 2, mRNA (cDNA clone IMAGE:6503369), partial cds Length = 2377 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1880 atttcttcctcttcctcttc 1861
>gb|BC017217.2| Homo sapiens leprecan-like 2, mRNA (cDNA clone IMAGE:4299569), partial cds Length = 2261 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1723 atttcttcctcttcctcttc 1704
>gb|AC161436.4| Mus musculus chromosome 1, clone RP23-90P3, complete sequence Length = 164444 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 68482 atttcttcctcttcctcttc 68463
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tccatatttttacttgtcagctca 55 |||| ||||||||||||||||||| Sbjct: 75628 tccaaatttttacttgtcagctca 75605
>ref|NM_014262.2| Homo sapiens leprecan-like 2 (LEPREL2), mRNA Length = 2893 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 2411 atttcttcctcttcctcttc 2392
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence Length = 181548 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 176841 atttcttcctcttcctcttc 176822
>ref|XM_751513.1| Ustilago maydis 521 hypothetical protein (UM00459.1) partial mRNA Length = 3129 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 tcttcctcttcctcttcggc 608 |||||||||||||||||||| Sbjct: 3095 tcttcctcttcctcttcggc 3076
>ref|XM_567507.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNJ01290) partial mRNA Length = 1542 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tttcttcctcttcctcttcg 606 |||||||||||||||||||| Sbjct: 343 tttcttcctcttcctcttcg 324
>ref|XM_570954.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE02510) partial mRNA Length = 2807 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 2106 atttcttcctcttcctcttc 2087
>ref|XM_448859.1| Candida glabrata CBS138, CAGL0L02057g partial mRNA Length = 1401 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1157 atttcttcctcttcctcttc 1138
>ref|XM_806958.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506267.90) partial mRNA Length = 834 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 419 atttcttcctcttcctcttc 400
>ref|XM_808327.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506335.100) partial mRNA Length = 1059 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 284 atttcttcctcttcctcttc 265
>gb|AC134998.2| Homo sapiens 3 BAC RP11-437K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 aatcttccatttctcttgcagaat 517 |||||||||||||||||| ||||| Sbjct: 116869 aatcttccatttctcttgaagaat 116892
>gb|AC125147.4| Mus musculus BAC clone RP24-350A15 from chromosome 7, complete sequence Length = 184180 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||| ||||||||||||||||||| Sbjct: 77953 ttcattttcttcctcttcctcttc 77930
>gb|AC122386.3| Mus musculus BAC clone RP24-72H18 from chromosome 7, complete sequence Length = 161949 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 137695 atttcttcctcttcctcttc 137714
>ref|XM_647608.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (108.t00005) partial mRNA Length = 837 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||||||||||| ||||||||||| Sbjct: 645 ttcaatttcttcttcttcctcttc 622
>ref|XM_649019.1| Entamoeba histolytica HM-1:IMSS fibrillarin (62.t00010) partial mRNA Length = 918 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 27 atttcttcctcttcctcttc 8
>ref|XM_721037.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05642) partial mRNA Length = 3937 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||| ||||||||||||||||||| Sbjct: 2721 ttcattttcttcctcttcctcttc 2698
>ref|XM_722910.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00959) partial mRNA Length = 15222 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 9287 tcaatttcttcctcttcctc 9268
>ref|XM_730313.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300188.00.0) partial mRNA Length = 729 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 563 tcaatttcttcctcttcctc 544
>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete sequence Length = 232462 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 136171 atttcttcctcttcctcttc 136190
>ref|XM_734600.1| Plasmodium chabaudi chabaudi hypothetical protein (PC100079.00.0) partial mRNA Length = 316 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tttcttcctcttcctcttcg 606 |||||||||||||||||||| Sbjct: 232 tttcttcctcttcctcttcg 213
>ref|XM_535229.2| PREDICTED: Canis familiaris similar to Leucyl-tRNA synthetase, cytoplasmic (Leucine--tRNA ligase) (LeuRS) (LOC478051), mRNA Length = 3726 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 380 atttcttcctcttcctcttc 361
>gb|BC002540.2| Homo sapiens SEC23 interacting protein, mRNA (cDNA clone IMAGE:3138899), partial cds Length = 2777 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1527 gaaggaactccactctgcttactt 1504
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 ||||||||||||||| |||||||| Sbjct: 21520 ttcaatttcttcctcctcctcttc 21497
>gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Hospital Oakland Research Institute) complete sequence Length = 217080 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccatgacaatttcatgagaa 165 |||||||||||||||||||| Sbjct: 139448 ccatgacaatttcatgagaa 139429
>emb|AL596245.3| Human DNA sequence from clone RP11-573C10 on chromosome X, complete sequence Length = 175618 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tgaatcttccatttctcttg 511 |||||||||||||||||||| Sbjct: 166296 tgaatcttccatttctcttg 166277
>emb|AL161631.20| Human DNA sequence from clone RP11-70K10 on chromosome 9 Contains a pseudogene similar to part of the transient receptor potential cation channel (TRP) family of proteins and the gene for a novel protein (FLJ20300), complete sequence Length = 119819 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 623 atggaacagaacattccatatcat 646 |||||||||||||| ||||||||| Sbjct: 54551 atggaacagaacatcccatatcat 54528
>emb|AL133461.10| Human DNA sequence from clone RP11-359E7 on chromosome 10 Contains the 3' end of the SAC2 gene for Sac domain-containing inositol phosphatase 2, a novel gene (FLJ13081), the 5' end of the SEC23IP gene for SEC23 interacting protein, a novel gene and three CpG islands, complete sequence Length = 124328 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 119574 gaaggaactccactctgcttactt 119551
>emb|AL096709.11|HSDJ20N4 Human DNA sequence from clone RP1-20N4 on chromosome 6q12-13 Contains a beclin 1 (BECN1) pseudogene, complete sequence Length = 138025 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 catctttgaagataattttc 572 |||||||||||||||||||| Sbjct: 98778 catctttgaagataattttc 98759
>ref|XM_780399.1| PREDICTED: Strongylocentrotus purpuratus similar to leucine-rich and immunoglobulin-like domains 3 (LOC580332), mRNA Length = 3072 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gataacattcccagcaaagt 82 |||||||||||||||||||| Sbjct: 1236 gataacattcccagcaaagt 1217
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1440213 atttcttcctcttcctcttc 1440194
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 242648 atttcttcctcttcctcttc 242629
>gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome 14, complete sequence Length = 215474 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 127216 atttcttcctcttcctcttc 127235
>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a pseudogene similar to part of eukaryotic translation initiation factor 3, subunit 5 (epsilon) Eif3s5, complete sequence Length = 160629 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 147117 atttcttcctcttcctcttc 147098
>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the 3' end of the Vdac1 gene for voltage-dependent anion channel 1, a novel gene (9530068E07Rik), a ubiquinol-cytochrome c reductase subunit (Uqcr) pseudogene, a novel pseudogene, a ribosomal protein S28 (Rps28) pseudogene and a CpG island, complete sequence Length = 165536 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 135683 atttcttcctcttcctcttc 135702
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 66660 atttcttcctcttcctcttc 66679
>gb|AC104864.6| Homo sapiens chromosome 8, clone RP11-324E17, complete sequence Length = 168786 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tgaatcttccatttctcttg 511 |||||||||||||||||||| Sbjct: 133256 tgaatcttccatttctcttg 133275
>gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, complete sequence Length = 149660 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcc 600 |||||||||||||||||||| Sbjct: 101745 tttcaatttcttcctcttcc 101726
>gb|AF188026.4| Homo sapiens chromosome 8 clone CTD-2373L20 map 8q24.3, complete sequence Length = 101456 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 aagttcactgcaattgaatcttcc 501 ||||||||||||||||| |||||| Sbjct: 6904 aagttcactgcaattgattcttcc 6881
>dbj|AK126766.1| Homo sapiens cDNA FLJ44813 fis, clone BRACE3044495, weakly similar to Homo sapiens GROS1-L protein Length = 3226 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 2744 atttcttcctcttcctcttc 2725
>emb|CR619756.1| full-length cDNA clone CS0DD008YK06 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 3418 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1541 gaaggaactccactctgcttactt 1518
>dbj|AK096771.1| Homo sapiens cDNA FLJ39452 fis, clone PROST2009795 Length = 2198 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1706 atttcttcctcttcctcttc 1687
>emb|CR598012.1| full-length cDNA clone CS0DI055YJ03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2081 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1644 atttcttcctcttcctcttc 1625
>dbj|AK021846.1| Homo sapiens cDNA FLJ11784 fis, clone HEMBA1006031, highly similar to Homo sapiens mRNA for putative phospholipase Length = 2152 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 920 gaaggaactccactctgcttactt 897
>dbj|AK001135.1| Homo sapiens cDNA FLJ10273 fis, clone HEMBB1001137, highly similar to Homo sapiens mRNA for putative phospholipase Length = 4224 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1548 gaaggaactccactctgcttactt 1525
>gb|AC090776.3| Homo sapiens chromosome 8, clone CTD-2373L20, complete sequence Length = 101459 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 478 aagttcactgcaattgaatcttcc 501 ||||||||||||||||| |||||| Sbjct: 94555 aagttcactgcaattgattcttcc 94578
>gb|AF479256.1| Dictyostelium discoideum non-transporter ABC protein AbcF4 (abcF4) gene, complete cds; and unknown gene Length = 5003 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ttcaatttcttcctcttcctcttc 605 |||||||||||| ||||||||||| Sbjct: 2014 ttcaatttcttcttcttcctcttc 1991
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 aagttcactgcaattgaatcttcc 501 ||||||||||||||||| |||||| Sbjct: 153151 aagttcactgcaattgattcttcc 153128
>gb|AC027672.12| Homo sapiens chromosome 10 clone RP11-198M6, complete sequence Length = 187229 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 99715 gaaggaactccactctgcttactt 99738
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23, complete sequence Length = 261934 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tttctcttgcagaatcaaga 522 |||||||||||||||||||| Sbjct: 252040 tttctcttgcagaatcaaga 252059
>emb|AJ430349.1|HSA430349 Homo sapiens mRNA for leprecan-like 2 protein (LEPREL2 gene) Length = 2893 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 2411 atttcttcctcttcctcttc 2392
>ref|NM_063398.3| Caenorhabditis elegans T13H5.4 (T13H5.4) mRNA, complete cds Length = 1604 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 1117 tcaatttcttcctcttcctc 1098
>dbj|AK034507.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330209H12 product:unclassifiable, full insert sequence Length = 2708 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1746 atttcttcctcttcctcttc 1765
>dbj|AK041733.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630033B20 product:unclassifiable, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 72 atttcttcctcttcctcttc 91
>emb|BX825894.1|CNS0A54R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1119 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctcttcg 606 |||| ||||||||||||||||||| Sbjct: 370 tcaaattcttcctcttcctcttcg 347
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 51374 atttcttcctcttcctcttc 51355
>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tgattcacatctttgaagat 565 |||||||||||||||||||| Sbjct: 42791 tgattcacatctttgaagat 42810
>ref|NM_214576.1| Strongylocentrotus purpuratus metallothionein b (MTb), mRNA Length = 840 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 caataagttccatattttta 43 |||||||||||||||||||| Sbjct: 506 caataagttccatattttta 487
>gb|AC024095.13|AC024095 Homo sapiens 12 BAC RP11-239A17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122032 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tagcatttcaatttcttcct 595 |||||||||||||||||||| Sbjct: 53664 tagcatttcaatttcttcct 53683
>gb|AF116723.1| Homo sapiens MSTP053 mRNA, complete cds Length = 4671 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1527 gaaggaactccactctgcttactt 1504
>emb|BX649119.1|HSM809271 Homo sapiens mRNA; cDNA DKFZp686N1929 (from clone DKFZp686N1929) Length = 4607 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1500 gaaggaactccactctgcttactt 1477
>emb|BX005164.9| Mouse DNA sequence from clone RP23-257P3 on chromosome X, complete sequence Length = 168756 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gcttctctaatggaacagaacatt 637 |||||||||| ||||||||||||| Sbjct: 80552 gcttctctaaaggaacagaacatt 80575
>emb|BX470195.10| Mouse DNA sequence from clone RP23-4K22 on chromosome X, complete sequence Length = 213684 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cagagaaatacttgctccca 104 |||||||||||||||||||| Sbjct: 178823 cagagaaatacttgctccca 178842
>dbj|AK025976.1| Homo sapiens cDNA: FLJ22323 fis, clone HRC05538, highly similar to HSU47926 Human unknown protein B mRNA Length = 2648 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 2149 atttcttcctcttcctcttc 2130
>dbj|AK000698.1| Homo sapiens cDNA FLJ20691 fis, clone KAIA2759, highly similar to AB019435 Homo sapiens mRNA for putative phospholipase Length = 2281 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 367 gaaggaactccactctgcttactt 344
>ref|XM_321656.2| Anopheles gambiae str. PEST ENSANGP00000024799 (ENSANGG00000009011), partial mRNA Length = 3564 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 aatcggtatcagcaacccac 138 |||||||||||||||||||| Sbjct: 2928 aatcggtatcagcaacccac 2947
>emb|Z66524.1|CET13H5 Caenorhabditis elegans Cosmid T13H5, complete sequence Length = 35807 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 27431 tcaatttcttcctcttcctc 27450
>emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23, complete sequence Length = 142417 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tttctcttgcagaatcaaga 522 |||||||||||||||||||| Sbjct: 40845 tttctcttgcagaatcaaga 40864
>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete sequence Length = 118818 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ccactctgcttacttccagt 465 |||||||||||||||||||| Sbjct: 66064 ccactctgcttacttccagt 66045
>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete sequence Length = 103181 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ccactctgcttacttccagt 465 |||||||||||||||||||| Sbjct: 16842 ccactctgcttacttccagt 16823
>emb|Y09271.1|ASTARGPEP Artificial sequence DNA for targeting peptide Length = 240 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 148 atttcttcctcttcctcttc 129
>gb|AC114602.16| Mus musculus chromosome 8, clone RP23-339B16, complete sequence Length = 196024 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 108326 atttcttcctcttcctcttc 108307
>gb|AC116688.14| Mus musculus chromosome 17, clone RP24-169A20, complete sequence Length = 150860 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 97718 atttcttcctcttcctcttc 97737
>gb|U47926.1|HSU47926 Human unknown protein B mRNA, complete cds Length = 2129 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1647 atttcttcctcttcctcttc 1628
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tttcaatttcttcctcttcc 600 |||||||||||||||||||| Sbjct: 3050104 tttcaatttcttcctcttcc 3050085
>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 147324 atttcttcctcttcctcttc 147343
>emb|AL772272.14| Mouse DNA sequence from clone RP23-369I8 on chromosome 4, complete sequence Length = 129858 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 33189 atttcttcctcttcctcttc 33170
>dbj|AB209320.1| Homo sapiens premature mRNA for LEPREL2 protein variant Length = 2431 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 1949 atttcttcctcttcctcttc 1930
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 197708 atttcttcctcttcctcttc 197689
>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete sequence Length = 224344 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atttcttcctcttcctcttc 605 |||||||||||||||||||| Sbjct: 91990 atttcttcctcttcctcttc 92009
>gb|M15989.1|SUSMETB S.purpuratus metallothionein (MTb) mRNA, complete cds, clone pMTb Length = 846 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 caataagttccatattttta 43 |||||||||||||||||||| Sbjct: 506 caataagttccatattttta 487
>dbj|AB040746.1| Carassius auratus gene for c-MYC, complete cds Length = 10583 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tcaatttcttcctcttcctc 602 |||||||||||||||||||| Sbjct: 9359 tcaatttcttcctcttcctc 9340
>dbj|AB046069.1| Macaca fascicularis brain cDNA, clone:QccE-13335 Length = 1674 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 gataattttccaatagcatt 582 |||||||||||||||||||| Sbjct: 1599 gataattttccaatagcatt 1618
>dbj|AB019435.1| Homo sapiens mRNA for putative phospholipase, complete cds Length = 3088 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 gaagcaactccactctgcttactt 460 |||| ||||||||||||||||||| Sbjct: 1567 gaaggaactccactctgcttactt 1544
>dbj|AP002512.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-3051L14, complete sequences Length = 175031 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 attcacatctttgaagataatttt 571 ||||||||||||| |||||||||| Sbjct: 109653 attcacatctttgcagataatttt 109676 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 attcacatctttgaagataatttt 571 ||||||||||||| |||||||||| Sbjct: 91872 attcacatctttgcagataatttt 91849 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,902,086 Number of Sequences: 3902068 Number of extensions: 6902086 Number of successful extensions: 240029 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 239179 Number of HSP's gapped (non-prelim): 849 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
