ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags37o12 |
|---|---|
| Clone Library Name | barley_pub |
>DBP8_NEUCR (Q7RYZ7) ATP-dependent RNA helicase dbp-8 (EC 3.6.1.-)| Length = 626 Score = 36.6 bits (83), Expect = 0.079 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 7/96 (7%) Frame = -1 Query: 692 HMEDYSVYGSXXXXXXXXXXXXXXDLSDEERDVHEIEAGSVDEHSTKSDEE---YDDLAM 522 H ED S +GS D DE+ D H++E G DE SDEE D+ Sbjct: 37 HSEDESDFGSELDVEDESAASDEED-EDEDEDEHDLEEGVSDEGEGVSDEEEGVSDEDED 95 Query: 521 QDVMENGNCSDDD----DEQAAGYGTRSSPPMDESI 426 ++ G+ SD D D A R+SP +D+ + Sbjct: 96 EENQSAGSGSDSDSDSLDSDAPRKRRRTSPTIDDIV 131
>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hDaxx) (Fas| death domain-associated protein) (ETS1-associated protein 1) (EAP1) Length = 740 Score = 35.4 bits (80), Expect = 0.18 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = -1 Query: 614 SDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSP 444 SDEE + E E +E +T S+EE D MQ+ E+ D+++E AAG SP Sbjct: 443 SDEEEEEEEEEE---EEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSP 496
>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12| Length = 509 Score = 34.3 bits (77), Expect = 0.39 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQ 474 D++ D E+E DE + DEE D+ +D E DDDD++ Sbjct: 35 DQQEDKMEVEDEEEDEEEDEEDEEEDEEDEEDEEEKEEDDDDDDDE 80
>MCM6_YEAST (P53091) DNA replication licensing factor MCM6 (Minichromosome| maintenance protein 6) Length = 1017 Score = 34.3 bits (77), Expect = 0.39 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -1 Query: 572 VDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMD 435 VD + DEE+D++ Q +GN D+DD +G T S PP D Sbjct: 838 VDVDDVEMDEEFDNIESQSHAASGNNDDNDDGTGSGVIT-SEPPAD 882
>PTMA_BRARE (Q6NV32) Prothymosin alpha| Length = 105 Score = 33.9 bits (76), Expect = 0.51 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -1 Query: 566 EHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMDESILGDD 414 + + DEE DD+A +D ++G DDD+++ A GT D+ DD Sbjct: 45 DQENEVDEEDDDVAEEDEEDDGEGDDDDEDEEAEGGTGKRAAEDDDDDEDD 95
>BFR2_CANAL (Q5ACL9) Protein BFR2| Length = 512 Score = 33.5 bits (75), Expect = 0.67 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = -1 Query: 617 LSDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPM 438 L D+E D EA S +E +S EE +D +DV + DD+D+Q + + S Sbjct: 90 LYDDEDDKQPTEASSGEELDAESAEEEEDEESEDVAD-----DDEDDQESDRSSSSDAEN 144 Query: 437 DE 432 DE Sbjct: 145 DE 146
>LEO1_YEAST (P38439) Protein LEO1| Length = 464 Score = 33.5 bits (75), Expect = 0.67 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = -1 Query: 557 TKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMDESILGDDAVLEGRYHHNLD 378 TK +E+ +D + D+ + N DDDD+ +S DE G++ R+ +L Sbjct: 48 TKEEEQEEDAELDDLFGDDNDDDDDDDVKKSETEKSDSDSDEDDEGENINHRSRHRESLG 107 Query: 377 L 375 L Sbjct: 108 L 108
>SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3.6.1.-)| (ATP-dependent helicase SNF2) (SWI/SNF complex component SNF2) (Regulatory protein SWI2) (Regulatory protein GAM1) (Transcription factor TYE3) Length = 1703 Score = 33.1 bits (74), Expect = 0.87 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -1 Query: 602 RDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGY 462 +D + +D H ++ EE DDL+M M++ DDDD Y Sbjct: 698 KDQQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDY 744
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 33.1 bits (74), Expect = 0.87 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -2 Query: 397 GTTT---TWTSSRCPRTSPPQRCRARDTAAPDQPRGKKSLDTTATVHWRPRCSWAHYL 233 GTTT T +SR T+ P + R T P QP + T T+ P+C+W+ +L Sbjct: 2269 GTTTPGHTTATSRTTATATPSKTRT-STLLPSQPTSAP-ITTVVTMGCEPQCAWSEWL 2324 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = -2 Query: 397 GTTT---TWTSSRCPRTSPPQRCRARDTAAPDQPRGKKSLDTTATVHWRPRCSWAHYL 233 GTTT T +SR T+ P + R T P QP + T T P+C+W+ +L Sbjct: 4025 GTTTPGHTTATSRTTATATPSKTRT-STLLPSQPTSAP-ITTVVTTGCEPQCAWSEWL 4080 Score = 31.2 bits (69), Expect = 3.3 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = -2 Query: 397 GTTT---TWTSSRCPRTSPPQRCRARDTAAPDQPRGKKSLDTTATVHWRPRCSWAHYL 233 GTTT T +SR T+ P + R T P P + T T+ P+C+W+ +L Sbjct: 2798 GTTTPGHTTATSRTTATATPSKTRT-STLLPSSPTSAP-ITTVVTMGCEPQCAWSEWL 2853 Score = 29.6 bits (65), Expect = 9.7 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -2 Query: 397 GTTT---TWTSSRCPRTSPPQRCRARDTAAPDQPRGKKSLDTTATVHWRPRCSWAHYL 233 GTTT T +SR T+ P + R T P P + T T P+C+W+ +L Sbjct: 3496 GTTTPGHTRGTSRTTATATPSKTRT-STLLPSSPTSAP-ITTVVTTGCEPQCAWSEWL 3551
>CN159_HUMAN (Q7Z3D6) Protein C14orf159, mitochondrial precursor| Length = 616 Score = 32.7 bits (73), Expect = 1.1 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = -3 Query: 336 VRVTPPPLTNPGGRKAWTPLPRFTGGRGALGHIIWWCFQFGVCTGCCTHMSLY 178 V P PL + W P+ +GH +W ++FG CTG + Y Sbjct: 58 VNTGPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQY 110
>TRSF_DROER (Q23935) Female-specific protein transformer| Length = 178 Score = 32.3 bits (72), Expect = 1.5 Identities = 24/69 (34%), Positives = 32/69 (46%) Frame = +2 Query: 482 HRRQSSCRSPSHPASLGRRTPRRTWWSARRQSPLQSHEHPFLRQIDPHQFQRQVGRQLLL 661 HR +S R+ S S RR +R S RR +P + +L Q+ P F G Q Sbjct: 83 HRHRSRSRNRSRSRSSERRRRQR---SPRRYNPPPKIINYYL-QVPPQDFYGMSGMQQRF 138 Query: 662 HYHRLNNPP 688 Y RL +PP Sbjct: 139 GYQRLPHPP 147
>CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alpha-1E subunit| (Voltage-gated calcium channel alpha subunit Cav2.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (RBE-II) (RBE2) (Brain calcium channel II) (BII) Length = 2222 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -3 Query: 426 PRR*RRAGGQVPPQPGPLHDVQGRHRHKDAVRVTPPPLTNPGG 298 PRR RR VPP+P PL RH ++PPP + GG Sbjct: 2061 PRRSRRQLPPVPPKPRPLLSYSSLMRHTGG--ISPPPDGSEGG 2101
>CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel alpha-1E subunit| (Voltage-gated calcium channel alpha subunit Cav2.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Brain calcium channel II) (BII) Length = 2272 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -3 Query: 426 PRR*RRAGGQVPPQPGPLHDVQGRHRHKDAVRVTPPPLTNPGG 298 PRR RR VPP+P PL RH ++PPP + GG Sbjct: 2112 PRRSRRQLPPVPPKPRPLLSYSSLMRHTGG--ISPPPDGSEGG 2152
>YA9A_SCHPO (Q09788) Hypothetical serine-rich protein C13G6.10c precursor| Length = 530 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/64 (34%), Positives = 30/64 (46%) Frame = +1 Query: 391 WYLPSSTASSPRMLSSMGGELLVPYPAACSSSSSEQLPFSITSCIARSSYSSSDLVECSS 570 W S S+P ++ E YPA S SSS + +S SSYS+S E +S Sbjct: 126 WSNTSVPVSTPETSATSSSEFFTSYPATSSESSSS---YPASSTEVASSYSASS-TEVTS 181 Query: 571 TEPA 582 + PA Sbjct: 182 SYPA 185
>IDS_HUMAN (P22304) Iduronate 2-sulfatase precursor (EC 3.1.6.13)| (Alpha-L-iduronate sulfate sulfatase) (Idursulfase) [Contains: Iduronate 2-sulfatase 42 kDa chain; Iduronate 2-sulfatase 14 kDa chain] Length = 550 Score = 31.6 bits (70), Expect = 2.5 Identities = 25/82 (30%), Positives = 32/82 (39%) Frame = +1 Query: 334 HGIFVAVTSLDIVKRSRLWWYLPSSTASSPRMLSSMGGELLVPYPAACSSSSSEQLPFSI 513 HG + ++ D+ L +Y+P TAS P GE L PY PF Sbjct: 342 HGEWAKYSNFDVATHVPLIFYVPGRTASLPE-----AGEKLFPYLD----------PFDS 386 Query: 514 TSCIARSSYSSSDLVECSSTEP 579 S + S DLVE S P Sbjct: 387 ASQLMEPGRQSMDLVELVSLFP 408
>MMP12_RAT (Q63341) Macrophage metalloelastase precursor (EC 3.4.24.65) (MME)| (Matrix metalloproteinase-12) (MMP-12) Length = 465 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +1 Query: 286 PGFSSPGVGQGRRCHAHGIFVAVTSLD----IVKRSRLWWYLPSSTASSPRMLSSM 441 P ++PG CH F AVT++ K WW LP S A++ +SSM Sbjct: 265 PSLTNPGSPPSTVCHQSLSFDAVTTVGDKIFFFKDWFFWWRLPGSPATNITSISSM 320
>DAXX_CERAE (O18805) Death domain-associated protein 6 (Daxx)| Length = 736 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSP 444 DEE D E E +E EE +DL + + ++++E+AAG SP Sbjct: 440 DEESDEEEEEEEEEEEEEATDFEEEEDLEQMQEGQEDDEEEEEEEEAAGKDGDGSP 495
>YU0O_CAEEL (Q19753) Hypothetical protein F23B12.7 in chromosome V| Length = 953 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/67 (25%), Positives = 32/67 (47%) Frame = -1 Query: 617 LSDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPM 438 + D++ D +++ D+ + D+E DD D+DD++ G+G +SS Sbjct: 842 MEDDDEDDGDMDDDDEDDEDAEDDDEVDD------------DDEDDDEDGGFGGKSS--- 886 Query: 437 DESILGD 417 +I GD Sbjct: 887 -ANIFGD 892
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 31.2 bits (69), Expect = 3.3 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +1 Query: 403 SSTASSPRMLSSMGGELLVPYPAACSSSSSEQLPFSITSCIARSSYSSSDLVECSST 573 SS++SS +SS ++P SSSSS P S +S + SS SSS +V SS+ Sbjct: 612 SSSSSSSVPVSSSSSSSIIP-----SSSSSSIQPSSSSSSMPSSSSSSSSVVASSSS 663
>GLGB1_STRAW (Q82JF0) 1,4-alpha-glucan branching enzyme 1 (EC 2.4.1.18)| (Glycogen branching enzyme 1) (BE 1) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1) Length = 838 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 462 WHQELTAHG*EHPRR*RRAGGQVPPQPGPLH-DVQGRHRHKDAVRVTPPPLT 310 WH+ L G R GG P P+ + QGRH ++R+T PPL+ Sbjct: 787 WHETLNTDG-------ARYGGSDVTNPHPVKPEPQGRHGRPASIRLTLPPLS 831
>ARP8_YEAST (Q12386) Actin-like protein ARP8| Length = 881 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = -1 Query: 617 LSDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPM 438 LS + RDV + E + DE+ +D+ +D +N N +++++E + R+ P + Sbjct: 69 LSVDPRDVADEEDEDEEGEDEDEDEDDNDVDNEDENDNDNANENENELGSSRDKRAPPAV 128 Query: 437 DES 429 S Sbjct: 129 QTS 131
>BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog| Length = 1282 Score = 30.8 bits (68), Expect = 4.3 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -1 Query: 578 GSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQ 474 G DE DEE D+++ D +ENG+ ++ +E+ Sbjct: 434 GDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEE 468
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 30.8 bits (68), Expect = 4.3 Identities = 23/92 (25%), Positives = 38/92 (41%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMDE 432 D+ +D + G KSD DD+A++ V E DD G ++P D+ Sbjct: 2889 DQAKDQAKSTTGQKLAKDPKSDGLTDDVALEIVPEKTPLPDDSP---IGAVPENTPLPDD 2945 Query: 431 SILGDDAVLEGRYHHNLDLFTMSKDVTATKMP 336 S +G + + H D + + A K+P Sbjct: 2946 SPIGSPDLSASKNSHTTDAVSSDRFSVACKVP 2977
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/60 (33%), Positives = 31/60 (51%) Frame = +1 Query: 403 SSTASSPRMLSSMGGELLVPYPAACSSSSSEQLPFSITSCIARSSYSSSDLVECSSTEPA 582 SS++SS SS ++ SSSSS +P + ++ + SS SSS SS+ P+ Sbjct: 176 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPS 235
>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)| (NY-REN-62 antigen) Length = 1674 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -1 Query: 605 ERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQA 471 ER+ +E+E E S DEE ++ +D ++ G SD+ D ++ Sbjct: 593 ERENNELEVEESQEVSDHEDEEEEEEEEEDDIDGGESSDESDSES 637
>FRQ_NEUCR (P19970) Frequency clock protein| Length = 989 Score = 30.8 bits (68), Expect = 4.3 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = -1 Query: 617 LSDEERDVHEIEAGSVDEH--STKSDEEY---------DDLAMQDVMENGNCSDDDDEQA 471 L+ ++ +V E+E S E S +++ + DDLA + SDD+ Sbjct: 871 LASDDEEVEEVEEDSYSEGQISRRANPHFSDNNTYMRKDDLAFDTETDVRMDSDDNRLSD 930 Query: 470 AGYGTRSSPPMDESILGDDAVLEGRYHHNLDLFTMSKDV 354 +G+ R+ P E++ GDD+ L +D+ V Sbjct: 931 SGHNMRAMMPRAEAVDGDDSPLAAVTGKEVDMLHTGSSV 969
>HANG_DROME (Q9VXG1) Zinc finger protein hangover| Length = 1959 Score = 30.8 bits (68), Expect = 4.3 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMDE 432 ++ D+ E +G D+ S D++ DD + D E+G D+D+E G G DE Sbjct: 1642 EDSDDLDEDSSGDDDDSSGTGDDDDDDDSDDD--EDGEGEDEDEEGDGGEGE------DE 1693 Query: 431 SILGDDAVLEGRYHHNLDL 375 + A L + H DL Sbjct: 1694 EGVQPPAQLLPQQQHKTDL 1712
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 30.8 bits (68), Expect = 4.3 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = +2 Query: 191 WVQQPVQTPNWKHHQIMCPRAPRPPVNRGSGVQAFLPPG 307 W P + H ++ C P PP++ G AF+P G Sbjct: 108 WASSPCSVCSCNHGEVRCTPQPCPPLSCGHQELAFIPEG 146
>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor| Length = 217 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Frame = -2 Query: 427 SSEMTPCWRAGTTTTWTSSRCPRTSPPQRCRARDT------AAPDQPRGKKSLDTTATVH 266 S+ T TTTT T++R P T P C++ T A P +P K + TT T Sbjct: 46 STSTTTTTTTTTTTTTTTTRAPPTKP--TCKSTSTTTTTTRAPPTKPTCKSTSTTTTTTR 103 Query: 265 WRP 257 P Sbjct: 104 APP 106
>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding| mitotic phosphoprotein) Length = 551 Score = 30.4 bits (67), Expect = 5.7 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +1 Query: 241 VPKSTAAASEPWQWCPGFSSPGVGQGRRCHAHGIFVA----VTSLDIVKRSRLWWYLPSS 408 VP S +AS+PW P FS P G + +G A + RL LP+S Sbjct: 333 VPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTS 392 Query: 409 TASSPRMLSSMGGELLVPYPAACSSS 486 SS L + GE+ P A S Sbjct: 393 -GSSAGELELLAGEVPARSPGAFDMS 417
>AGRN_HUMAN (O00468) Agrin precursor| Length = 2045 Score = 30.4 bits (67), Expect = 5.7 Identities = 27/87 (31%), Positives = 33/87 (37%) Frame = -2 Query: 502 ATALTTMMSRLRGMAPGAHRPWMRASSEMTPCWRAGTTTTWTSSRCPRTSPPQRCRARDT 323 ATA T SRL A P +S+ TT ++R P T+ P R R Sbjct: 1269 ATARATTASRLPSSAVTPRAPHPSHTSQPV-----AKTTAAPTTRRPPTTAPSRVPGRRP 1323 Query: 322 AAPDQPRGKKSLDTTATVHWRPRCSWA 242 AP QP K D+ H WA Sbjct: 1324 PAPQQP--PKPCDSQPCFHGGTCQDWA 1348
>6PGL_MYCLE (Q49700) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)| Length = 247 Score = 30.4 bits (67), Expect = 5.7 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 25/112 (22%) Frame = +1 Query: 214 SELEAPPDNVPKSTAAASEPWQWCPGFSSPGVGQGRRCHAHGIF---VAVT--------- 357 ++LEA + AA + P P F +G G H + +F VAV Sbjct: 114 NDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGV 173 Query: 358 -------------SLDIVKRSRLWWYLPSSTASSPRMLSSMGGELLVPYPAA 474 +L+ ++RSR W + S TA + + ++MGG PAA Sbjct: 174 RNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAA 225
>SPT8_YEAST (P38915) Transcription factor SPT8| Length = 602 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/61 (26%), Positives = 29/61 (47%) Frame = -1 Query: 614 SDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMD 435 +D ++D+ + G DE D+E DD + ++ DDD E A +++ P + Sbjct: 29 NDSKQDLEGNDDGGEDEEDDDDDDEDDDDDEDEREDDDEQEDDDGEDDAARMDKTATPTN 88 Query: 434 E 432 E Sbjct: 89 E 89
>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)| Length = 350 Score = 30.4 bits (67), Expect = 5.7 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 617 LSDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDD-DEQAAG 465 L +E R V + G+ +E + +DEE D D E+ + +DDD D++ AG Sbjct: 293 LPEELRAVSAADTGAAEEEES-TDEEAADADQADAAEDDDAADDDGDDEDAG 343
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 30.4 bits (67), Expect = 5.7 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = +1 Query: 343 FVAVTSLDIVKRSRLWWYLPSSTA-----SSPRMLSSMGGELLVPYPAACSSSSSEQLPF 507 F A +L + +S L Y +ST+ SS ++SS G + + A +SSS+ + Sbjct: 8 FQAALALALYSQSALGQYYSNSTSISSNSSSTSVVSSSSGSVSISSSIAETSSSATDILS 67 Query: 508 SITSCIARSSYSSSDLVECSST 573 SIT + +S SS + SS+ Sbjct: 68 SITQSASSTSGVSSSVGPSSSS 89
>ASF1_YEAST (P32447) Anti-silencing protein 1| Length = 279 Score = 30.0 bits (66), Expect = 7.4 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = -1 Query: 614 SDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMD 435 ++ E D++ E VD+ + DEE DD + + D+DD+Q G G + Sbjct: 155 NENEGDLYPPEQPGVDDEEEEDDEEEDD-------DEDDEDDEDDDQEDGEGEAEEAAEE 207 Query: 434 E 432 E Sbjct: 208 E 208
>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)| Length = 2494 Score = 30.0 bits (66), Expect = 7.4 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = -1 Query: 608 EERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMDES 429 EERDV + E+ + ST S +E ++ + EN S+ + + S P + + Sbjct: 686 EERDVSQCESVA----STVSAQEDEENEASNEEENAEDSEGAENSSDTESAPSPSPAEAA 741 Query: 428 ILGDDAV 408 LGDDAV Sbjct: 742 KLGDDAV 748
>FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 357 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = -1 Query: 605 ERDVHEIEAGSVDEHSTKSD----EEYDDLAMQDVMENGNCSDDDD 480 E D E E+G DE T D EEY+ +ENG DDDD Sbjct: 119 EDDEDENESGEEDEEDTDDDSQIIEEYESF-----LENGEEEDDDD 159
>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background protein 3)| Length = 674 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = -1 Query: 614 SDEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDE 477 +DEE D + + G DE + D++ DD D ++ + DDDD+ Sbjct: 587 NDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDD 632
>TULP4_MOUSE (Q9JIL5) Tubby-like protein 4 (Tubby superfamily protein)| Length = 1547 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 557 TKSDEEYDDLAMQDVMENGNCSDDDD-EQAAGYGTRSSPPMDES 429 +KSDE Y + + V+++ NCSD D E + + + SP + S Sbjct: 493 SKSDEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRS 536
>MBB1A_BRARE (Q6DRL5) Myb-binding protein 1A-like protein| Length = 1269 Score = 30.0 bits (66), Expect = 7.4 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTK---SDEEYDDLAMQDVMENGNCSDDDDEQAAG--YGTRSS 447 D +D E D+ K DE+ DD D + G+ DDDD++ G G SS Sbjct: 708 DPNKDEDESGVVVTDDKKRKLKEEDEDDDDEEEDDDNDEGDDDDDDDDEEEGGEEGEESS 767 Query: 446 PPMDESILGDDAVLEGR 396 D+ D+A+ EG+ Sbjct: 768 DSSDDE-EEDEAMEEGQ 783
>STAG3_RAT (Q99M76) Cohesin subunit SA-3 (Stromal antigen 3) (Stromalin 3) (SCC3| homolog 3) Length = 1256 Score = 29.6 bits (65), Expect = 9.7 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 431 SHPWA-VSSWCHTPQPAHHRRQSSCRSPSHPASLGRRTPRR 550 SHPW V+++CH+ + ++S + P H PRR Sbjct: 1057 SHPWGPVTTYCHSLHLVENTAEASSQGPPHSKKRCIEVPRR 1097
>HD2C_ARATH (Q9LZR5) Histone deacetylase 2c (HD-tuins protein 3)| Length = 294 Score = 29.6 bits (65), Expect = 9.7 Identities = 13/56 (23%), Positives = 27/56 (48%) Frame = -1 Query: 611 DEERDVHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSP 444 D++ D E ++ D+ DEE + + + E + SDD+++ ++ T P Sbjct: 139 DDDADGSEEDSSDDDDSENSGDEEEEKVTAESDSEEDDSSDDEEDDSSEEETPKKP 194
>SIM1_YEAST (P40472) Protein SIM1 precursor| Length = 475 Score = 29.6 bits (65), Expect = 9.7 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Frame = +1 Query: 346 VAVTSLDIVKRSRLWWYLPSSTASSPRMLSSMGGELLVPYP---AACSSSSSEQLPFSI- 513 +AV+S + K ++ S+TAS+ + SS ++ SSSS E P S Sbjct: 90 IAVSSAALAKNEKISDAAASATASTSQGASSSSSSSSATSTLESSSVSSSSEEAAPTSTV 149 Query: 514 --TSCIARSSYSSSDLVECSSTEPA 582 TS +SS SS+ SST P+ Sbjct: 150 VSTSSATQSSASSATKSSTSSTSPS 174
>FLO9_YEAST (P39712) Flocculation protein FLO9 precursor| Length = 1322 Score = 29.6 bits (65), Expect = 9.7 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Frame = +1 Query: 352 VTSLDIVKRSRLWWYLPSSTASSPRMLSSMGGELLVPYPAACS--------SSSSEQLPF 507 VTS ++ S + + SST +S +LS ++P ++ S S+SS Sbjct: 917 VTSSPVISSSFISSPVISSTTTSASILSESSKSSVIPTSSSTSGSSESETGSASSASSSS 976 Query: 508 SITSCIARSSYSSSDLVECSS 570 SI+S +S+YSSS L +S Sbjct: 977 SISSESPKSTYSSSSLPPVTS 997
>IE68_PRVKA (P24827) Immediate-early protein RSP40| Length = 364 Score = 29.6 bits (65), Expect = 9.7 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -1 Query: 611 DEERD-VHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGNCSDDDDEQAAGYGTRSSPPMD 435 DEE D E E +E + +EE D+ DV E + ++D++++ G D Sbjct: 215 DEEEDGEEEDEDEEGEEEEDEEEEEGDEDGETDVYEEDDEAEDEEDEEDG------DDFD 268 Query: 434 ESILGDDAVLE 402 + +GDD V E Sbjct: 269 GASVGDDDVFE 279
>FKBP3_CANGA (Q6FKH7) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 437 Score = 29.6 bits (65), Expect = 9.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 548 DEEYDDLAMQDVMENGNCSDDDDEQ 474 DEEYDDL D E+ SDD++E+ Sbjct: 63 DEEYDDLLNGDYDEDEMASDDEEEE 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,685,420 Number of Sequences: 219361 Number of extensions: 2603593 Number of successful extensions: 10383 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 8959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10175 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
