ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags37n19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 476 bits (240), Expect = e-131 Identities = 354/392 (90%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 826 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 767 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 766 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 707 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 706 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 647 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 ||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 646 agtcacaagacgctggatcttaggagccttgctcaccttcttgccattcttggtagtgaa 587 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 586 tgtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagag 527 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 cttcctgatcttggaggccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 467 Query: 528 gcctggtagatcattctcacccttcttgacaa 559 ||| || || |||||||||||||||||||||| Sbjct: 466 gccaggcaggtcattctcacccttcttgacaa 435
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 476 bits (240), Expect = e-131 Identities = 354/392 (90%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 827 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 768 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 767 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 708 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 707 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 648 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 ||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 647 agtcacaagacgctggatcttaggagccttgctcaccttcttgccattcttggtagtgaa 588 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 587 tgtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagag 528 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 cttcctgatcttggaggccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 468 Query: 528 gcctggtagatcattctcacccttcttgacaa 559 ||| || || |||||||||||||||||||||| Sbjct: 467 gccaggcaggtcattctcacccttcttgacaa 436
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 387 bits (195), Expect = e-104 Identities = 359/411 (87%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| ||| ||||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct: 804 agccttggcggcggcagaaagcttggacctcctcttggccaagctctcgctccggcggtc 745 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 ||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 744 tctctgttccttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 685 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 ||| | ||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 684 cttagttatcctcttcttcttgtcagcgattctagcacgcttcctctggagggtcaaggg 625 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 |||||||| || |||||||| || |||||||| |||||||| || |||||| || ||| Sbjct: 624 tgtcacaagccgttggatcttaggtgccttgctgaccttcttgccgttcttggtagtgaa 565 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||||||||||||||||| || || |||| ||||||||||||||| ||||||||| || Sbjct: 564 tgtcctgcggtatgtgttcacgtacttgcgtacatcatcatccttgttaaggttgaacag 505 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 ||| ||||||| || ||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 504 ctttctgatcttggaggccctcttgggacccctcatccttggcttctcagtgtcagtcag 445 Query: 528 gcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 || || |||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 444 accaggcagatcattctcacccttcttcac-aatca-ccaagttgataaca 396
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 373 bits (188), Expect = e-100 Identities = 356/411 (86%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 803 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 744 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 743 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 684 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 683 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 624 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 |||||||| ||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 623 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttggtagtgaa 564 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||||||||||| ||||| || || |||| || || |||||||| |||| ||||| || Sbjct: 563 tgtcctgcggtacgtgttcacgtacttgcgcacgtcgtcatcctttgcaagattgaacag 504 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 |||| ||||||| || ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 503 cttcctgatcttggaggcccttttgggacccctcatccttggcttctcagtgtcagttaa 444 Query: 528 gcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 || || ||||| |||||||||||||| |||| | |||||||||||||| Sbjct: 443 accaggcagatcgttctcacccttcttaacaatta--ccaagttgataaca 395
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 373 bits (188), Expect = e-100 Identities = 356/411 (86%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 931 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 872 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 871 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 812 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 811 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 752 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 |||||||| ||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 751 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttggtagtgaa 692 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||||||||||| ||||| || || |||| || || |||||||| |||| ||||| || Sbjct: 691 tgtcctgcggtacgtgttcacgtacttgcgcacgtcgtcatcctttgcaagattgaacag 632 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 |||| ||||||| || ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 631 cttcctgatcttggaggcccttttgggacccctcatccttggcttctcagtgtcagttaa 572 Query: 528 gcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 || || ||||| |||||||||||||| |||| | |||||||||||||| Sbjct: 571 accaggcagatcgttctcacccttcttaacaatta--ccaagttgataaca 523
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 369 bits (186), Expect = 7e-99 Identities = 353/406 (86%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 711 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 652 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 651 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 592 Query: 353 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 412 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 591 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 532 Query: 413 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 472 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 531 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 472 Query: 473 tgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctg 532 ||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 471 tgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagtcaagccag 412 Query: 533 gtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 411 gaaggtcattatcacccttctttac-aatca-ccaagttgataaca 368
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 369 bits (186), Expect = 7e-99 Identities = 353/406 (86%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 709 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 650 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 649 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 590 Query: 353 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 412 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 589 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 530 Query: 413 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 472 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 529 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 470 Query: 473 tgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctg 532 ||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 469 tgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagtcaagccag 410 Query: 533 gtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 409 gaaggtcattatcacccttctttac-aatca-ccaagttgataaca 366
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 369 bits (186), Expect = 7e-99 Identities = 353/406 (86%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 708 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 649 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 648 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 589 Query: 353 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 412 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 588 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 529 Query: 413 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 472 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 528 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 469 Query: 473 tgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctg 532 ||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 468 tgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagtcaagccag 409 Query: 533 gtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 408 gaaggtcattatcacccttctttac-aatca-ccaagttgataaca 365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 281 bits (142), Expect = 1e-72 Identities = 202/222 (90%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 25671571 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 25671512 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 25671511 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 25671452 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 25671451 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 25671392 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctt 389 ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 25671391 agtcacaagacgctggatcttaggagccttgctcaccttctt 25671350 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 409 gtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagc 468 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 25671127 gtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagagc 25671068 Query: 469 ttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaagg 528 ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25671067 ttcctgatcttggaggccctcttgggtcccctcatcctgggcttctcagtgtcagtaagg 25671008 Query: 529 cctggtagatcattctcacccttcttgacaa 559 || || || |||||||||||||||||||||| Sbjct: 25671007 ccaggcaggtcattctcacccttcttgacaa 25670977
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 281 bits (142), Expect = 1e-72 Identities = 202/222 (90%) Strand = Plus / Minus Query: 168 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 227 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 125544 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 125485 Query: 228 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 287 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 125484 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 125425 Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 125424 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 125365 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctt 389 ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 125364 agtcacaagacgctggatcttaggagccttgctcaccttctt 125323 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 409 gtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagc 468 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 125100 gtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagagc 125041 Query: 469 ttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaagg 528 ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125040 ttcctgatcttggaggccctcttgggtcccctcatcctgggcttctcagtgtcagtaagg 124981 Query: 529 cctggtagatcattctcacccttcttgacaa 559 || || || |||||||||||||||||||||| Sbjct: 124980 ccaggcaggtcattctcacccttcttgacaa 124950
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 4e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15460697 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15460756 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15460757 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15460816 Query: 353 caagacgctggatcttgggggccttgctcaccttctt 389 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15460817 caagcctctggatcttaggagccttgctaaccttctt 15460853 Score = 178 bits (90), Expect = 1e-41 Identities = 155/174 (89%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 405 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 464 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 15461102 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 15461161 Query: 465 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagt 524 |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 15461162 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagt 15461221 Query: 525 aaggcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | ||| || || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 15461222 caagccaggaaggtcattatcacccttctttac-aatca-ccaagttgataaca 15461273
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 200 bits (101), Expect = 4e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 40829 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 40770 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 40769 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 40710 Query: 353 caagacgctggatcttgggggccttgctcaccttctt 389 |||| | ||||||||| || |||||||| |||||||| Sbjct: 40709 caagcctctggatcttaggagccttgctaaccttctt 40673 Score = 178 bits (90), Expect = 1e-41 Identities = 155/174 (89%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 405 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 464 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 40424 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 40365 Query: 465 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagt 524 |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 40364 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagt 40305 Query: 525 aaggcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | ||| || || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 40304 caagccaggaaggtcattatcacccttctttac-aatca-ccaagttgataaca 40253
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 4e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 173 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 232 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230 Query: 233 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 292 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15455231 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15455290 Query: 293 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 352 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15455291 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15455350 Query: 353 caagacgctggatcttgggggccttgctcaccttctt 389 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15455351 caagcctctggatcttaggagccttgctaaccttctt 15455387 Score = 178 bits (90), Expect = 1e-41 Identities = 155/174 (89%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 405 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 464 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 15455636 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 15455695 Query: 465 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagt 524 |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 15455696 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggcttctcagtgtcagt 15455755 Query: 525 aaggcctggtagatcattctcacccttcttgacaaatcacccaagttgataaca 578 | ||| || || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 15455756 caagccaggaaggtcattatcacccttctttac-aatca-ccaagttgataaca 15455807
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 172 bits (87), Expect = 8e-40 Identities = 276/339 (81%) Strand = Plus / Minus Query: 178 gcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctctgctcc 237 |||||||| ||| | |||||| |||| |||| ||||||||| || || |||||||||||| Sbjct: 750 gcagcagagagcctggacctcttctttgccaagctctcactgcgtcggtccctctgctcc 691 Query: 238 ttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 297 || |||||| ||||| ||||||||||| |||||||| || || || |||||| | Sbjct: 690 ttgagcctcgaggcaaggagcttctggtattctgcagcttcagatttggccttggcaact 631 Query: 298 ctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaaga 357 ||||||||||| || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 630 ctcttcttcttctctgcaattctggctcgcttcctttgcaaggtcaagggagtcacaagc 571 Query: 358 cgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcgg 417 | |||||| || || ||||| || ||||||| ||||||||| ||||||||| ||| Sbjct: 570 ctctggatttttggtgccttactgcaggtctttcctttcttgttagtgaaggtcctacgg 511 Query: 418 tatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatc 477 || ||||||||||| |||| |||||||| ||||| ||||||||| ||||| ||| Sbjct: 510 taagtgttgacatacttgcgtacatcatcttccttagaaaggttgaacagcttacggatt 451 Query: 478 ttcgaagccctcttgggtcccctcatcctgggcttctca 516 || || |||||||| ||||| |||||||| ||||||||| Sbjct: 450 ttggaggccctcttaggtcctctcatccttggcttctca 412
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 615 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 556 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 555 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 496 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 495 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 436 Query: 553 ttgacaa 559 || |||| Sbjct: 435 ttcacaa 429
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 710 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 651 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 650 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 591 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 590 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 531 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 530 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 471 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 470 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 411 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 410 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 351 Query: 553 ttgacaa 559 || |||| Sbjct: 350 ttcacaa 344
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 615 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 556 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 555 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 496 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 495 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 436 Query: 553 ttgacaa 559 || |||| Sbjct: 435 ttcacaa 429
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 615 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 556 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 555 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 496 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 495 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 436 Query: 553 ttgacaa 559 || |||| Sbjct: 435 ttcacaa 429
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 778 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 719 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 718 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 659 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 658 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 599 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 598 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 539 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 538 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 479 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 478 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 419 Query: 553 ttgacaa 559 || |||| Sbjct: 418 ttcacaa 412
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 165 bits (83), Expect = 2e-37 Identities = 296/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 597 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 596 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 537 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 536 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 477 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 476 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 417 Query: 553 ttgacaa 559 || |||| Sbjct: 416 ttcacaa 410
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 151 bits (76), Expect = 3e-33 Identities = 247/304 (81%) Strand = Plus / Minus Query: 256 agcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggca 315 |||||||| || || ||||| |||||||| |||||| || |||||||||||||||||| Sbjct: 698 agcttctgataatcagcagcttctgacttagccttggcaattctcttcttcttgtcggca 639 Query: 316 attctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggcc 375 ||||| || | |||||||||||| ||||| || || || || | ||||||||| || ||| Sbjct: 638 attcttgctctcttcctctggagagtcaatggtgttaccagcctctggatcttaggagcc 579 Query: 376 ttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatagctg 435 ||||| |||| || ||||| ||||| ||| || | ||| || ||||||||||| | Sbjct: 578 ttgctaacctctttcccctttttgtttgtgaatgttcggcgataggtgttgacatacttc 519 Query: 436 cggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttgggt 495 | ||||| |||||||| ||||||||||| |||||| | ||||| |||||||| ||||| Sbjct: 518 ctaacatcgtcatcctttccaaggttgaagagcttcctaatcttggaagcccttttggga 459 Query: 496 cccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttcttg 555 || |||||||| || || |||||||| || || || || |||||||||||||||||||| Sbjct: 458 cctctcatcctaggtttttcagtgtctgtcagtccgggcagatcattctcacccttcttc 399 Query: 556 acaa 559 |||| Sbjct: 398 acaa 395
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 151 bits (76), Expect = 3e-33 Identities = 223/272 (81%) Strand = Plus / Minus Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||| || |||||||||||||| |||||||| || | |||||||||||||||||| || Sbjct: 615 cttggctattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaatgg 556 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 ||||||||| | ||||||||| || |||||||| |||||||| ||||||||||| ||| Sbjct: 555 agtcacaagcctctggatcttaggagccttgctaaccttcttgcccttcttgtttgtgaa 496 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 ||| | |||||| ||||| || || | | |||||||| || || |||||||| || | Sbjct: 495 ggtacggcggtaagtgttaacgtacttcctcacatcatcctcttttccaaggttaaacaa 436 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 ||| |||||| || ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 435 cttgcggatctttgatgccctcttgggacctctcattcttggcttctcagtgtcggtaag 376 Query: 528 gcctggtagatcattctcacccttcttgacaa 559 || || |||||| | |||||||||| |||| Sbjct: 375 cccgggaagatcacttacacccttcttcacaa 344
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 645 Score = 149 bits (75), Expect = 1e-32 Identities = 270/335 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 446 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 387 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 386 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 327 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | ||||||||||||||| || ||||||||||| | ||||||||| || Sbjct: 326 gcaattctagctctcttcctctggagggtaaatggagtcacaagcctctggatcttagga 267 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 266 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 207 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 206 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 147 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaag 527 || || ||||| || |||||||||||||| ||||| Sbjct: 146 ggacctctcattcttggcttctcagtgtcggtaag 112
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 149 bits (75), Expect = 1e-32 Identities = 270/335 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 456 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 397 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 396 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 337 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 336 gcaattctagctctcttcctctggagggtcaatggagtaacaagcctctggatcttagga 277 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| || || Sbjct: 276 gccttgctaaccttcttgcccttcttgtttgtgaaggtacggcggtaagtgttaacgtac 217 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 216 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 157 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaag 527 || || ||||| || |||||||||||||| ||||| Sbjct: 156 ggacctctcattcttggcttctcagtgtcggtaag 122
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 149 bits (75), Expect = 1e-32 Identities = 294/367 (80%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagttacaagcctctggatcttagga 597 Query: 373 gccttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatag 432 |||||||| |||||||| ||||||||||| ||||| | |||||| ||||| || || Sbjct: 596 gccttgctaaccttcttgcccttcttgtttgttaaggtacggcggtaagtgttaacgtac 537 Query: 433 ctgcggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttg 492 | | |||||||| || || |||||||| || | ||| |||||| || ||||||||| Sbjct: 536 ttcctcacatcatcctcttttccaaggttaaacaacttgcggatctttgatgccctcttg 477 Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttc 552 || || ||||| || |||||||||||||| ||||| || || |||||| | |||||||| Sbjct: 476 ggacctctcattcttggcttctcagtgtcggtaagcccgggaagatcacttacacccttc 417 Query: 553 ttgacaa 559 || |||| Sbjct: 416 ttcacaa 410
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 123 bits (62), Expect = 7e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| |||||||| |||||||| | ||||||||| ||||| || Sbjct: 89251 gacctcttcttggccaaactctcactacggcgatcacgctgctccttaagcctggaggcg 89310 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || |||||||||||||| || || || | || ||| || |||||||||||||||||| Sbjct: 89311 agaagcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcg 89370 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | ||||||||| || ||||| ||||||||||| | ||||||||||||| Sbjct: 89371 gcaattctagctctcttcctctgaagagtcaaaggagtcacaagcctctggatcttgggg 89430 Query: 373 gccttgctcaccttctttcccttcttgtta 402 || |||||||| | ||| || ||||||||| Sbjct: 89431 gctttgctcacttccttacctttcttgtta 89460 Score = 91.7 bits (46), Expect = 2e-15 Identities = 104/122 (85%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 438 gacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttgggtcc 497 ||||||||||||||| ||||||||||| || || |||||| ||||| ||||| ||||| Sbjct: 89508 gacatcatcatcctttccaaggttgaacagtttacggatcttagaagctctcttaggtcc 89567 Query: 498 cctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttcttgac 557 ||||||||| |||||||| || || ||||| || || ||||| |||| |||||||||||| Sbjct: 89568 cctcatcctcggcttctcggtatcggtaagcccgggaagatccttct-acccttcttgac 89626 Query: 558 aa 559 || Sbjct: 89627 aa 89628
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 193 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 252 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 106087 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 106028 Query: 253 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 312 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 106027 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 105968 Query: 313 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 372 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 105967 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 105908 Query: 373 gccttgctcaccttctt 389 |||||||| |||||||| Sbjct: 105907 gccttgctaaccttctt 105891 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 474 gatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctgg 533 |||||| || ||||||||||| || ||||| || |||||||||||||| ||||| || || Sbjct: 105719 gatctttgatgccctcttgggacctctcattcttggcttctcagtgtcggtaagcccggg 105660 Query: 534 tagatcattctcacccttcttgacaa 559 |||||| | |||||||||| |||| Sbjct: 105659 aagatcacttacacccttcttcacaa 105634
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 115 bits (58), Expect = 2e-22 Identities = 215/265 (81%), Gaps = 3/265 (1%) Strand = Plus / Minus Query: 295 atcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcaca 354 ||||||||||||||||| || ||||| || | ||||||||| |||||||| ||||||||| Sbjct: 665 atcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaacggagtcaca 606 Query: 355 agacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctg 414 || | |||||||||||| || |||||||| | ||| || |||||||| ||| | | | Sbjct: 605 agcctctggatcttgggagctttgctcacttccttgcctttcttgtttgtgaacttgcgg 546 Query: 415 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 474 ||||| |||||||| || | | ||||||||| ||||| | |||||| || || | Sbjct: 545 cggtaagtgttgacgtacttcctgacatcatcctccttaatgaagttgaacagtttacgg 486 Query: 475 atcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggt 534 ||||| ||||| ||||||||||||||||||| ||||| || ||||| ||||| || || Sbjct: 485 atcttggaagctctcttgggtcccctcatcc--ggctt-tcggtgtcggtaagcccggga 429 Query: 535 agatcattctcacccttcttgacaa 559 ||||| ||||||||||||||||||| Sbjct: 428 agatccttctcacccttcttgacaa 404
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 105 bits (53), Expect = 2e-19 Identities = 209/261 (80%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 615 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 556 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 555 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 496 Query: 419 atgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatct 478 | |||||||||||| | | ||||||||| ||||| ||||| || || || ||||| Sbjct: 495 aagtgttgacataggtcctgacatcatcttccttcttgaggttaaacagtttacggatct 436 Query: 479 tcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagat 538 | || || ||||| ||||| ||||| || ||||||||||| || ||||| || || |||| Sbjct: 435 tggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccaggaagat 376 Query: 539 cattctcacccttcttgacaa 559 | |||||||||||||| |||| Sbjct: 375 cgttctcacccttcttcacaa 355
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 105 bits (53), Expect = 2e-19 Identities = 209/261 (80%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 617 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 558 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 557 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 498 Query: 419 atgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatct 478 | |||||||||||| | | ||||||||| ||||| ||||| || || || ||||| Sbjct: 497 aagtgttgacataggtcctgacatcatcttccttcttgaggttaaacagtttacggatct 438 Query: 479 tcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagat 538 | || || ||||| ||||| ||||| || ||||||||||| || ||||| || || |||| Sbjct: 437 tggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccaggaagat 378 Query: 539 cattctcacccttcttgacaa 559 | |||||||||||||| |||| Sbjct: 377 cgttctcacccttcttcacaa 357
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 105 bits (53), Expect = 2e-19 Identities = 209/261 (80%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 485 Query: 419 atgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatct 478 | |||||||||||| | | ||||||||| ||||| ||||| || || || ||||| Sbjct: 484 aagtgttgacataggtcctgacatcatcttccttcttgaggttaaacagtttacggatct 425 Query: 479 tcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagat 538 | || || ||||| ||||| ||||| || ||||||||||| || ||||| || || |||| Sbjct: 424 tggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccaggaagat 365 Query: 539 cattctcacccttcttgacaa 559 | |||||||||||||| |||| Sbjct: 364 cgttctcacccttcttcacaa 344
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 105 bits (53), Expect = 2e-19 Identities = 209/261 (80%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 611 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 552 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 551 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 492 Query: 419 atgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatct 478 | |||||||||||| | | ||||||||| ||||| ||||| || || || ||||| Sbjct: 491 aagtgttgacataggtcctgacatcatcttccttcttgaggttaaacagtttacggatct 432 Query: 479 tcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagat 538 | || || ||||| ||||| ||||| || ||||||||||| || ||||| || || |||| Sbjct: 431 tggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccaggaagat 372 Query: 539 cattctcacccttcttgacaa 559 | |||||||||||||| |||| Sbjct: 371 cgttctcacccttcttcacaa 351
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 105 bits (53), Expect = 2e-19 Identities = 209/261 (80%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 600 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 541 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 540 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 481 Query: 419 atgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatct 478 | |||||||||||| | | ||||||||| ||||| ||||| || || || ||||| Sbjct: 480 aagtgttgacataggtcctgacatcatcttccttcttgaggttaaacagtttacggatct 421 Query: 479 tcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagat 538 | || || ||||| ||||| ||||| || ||||||||||| || ||||| || || |||| Sbjct: 420 tggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccaggaagat 361 Query: 539 cattctcacccttcttgacaa 559 | |||||||||||||| |||| Sbjct: 360 cgttctcacccttcttcacaa 340
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 103 bits (52), Expect = 6e-19 Identities = 124/148 (83%) Strand = Plus / Minus Query: 412 ctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttc 471 |||||||| ||||||||||| | | ||||||||| |||||| ||| ||||| ||||| Sbjct: 554 ctgcggtaagtgttgacatacttcctgacatcatcttccttggaaagattgaagagcttt 495 Query: 472 ttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcct 531 ||||||| |||||||| |||||||| |||||||| ||||| |||||||| || || || Sbjct: 494 ctgatcttggaagcccttttgggtcctctcatccttggcttttcagtgtcggtcagtcca 435 Query: 532 ggtagatcattctcacccttcttgacaa 559 || ||||||||||| |||||||| |||| Sbjct: 434 ggcagatcattctcccccttcttaacaa 407 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 250 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 309 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 716 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 657 Query: 310 tcggcaattct 320 || |||||||| Sbjct: 656 tcagcaattct 646
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 103 bits (52), Expect = 6e-19 Identities = 217/272 (79%) Strand = Plus / Minus Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 |||||| || |||||||||||||| || ||||| || | ||||||||| || ||||| || Sbjct: 686 cttggcaattctcttcttcttgtcagcgattcttgctctcttcctctgaagagtcaatgg 627 Query: 348 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 407 || || || | ||||||||| || |||||||| |||| || ||||| ||||| ||| Sbjct: 626 tgttaccagcctctggatcttaggagccttgctaacctctttcccctttttgtttgtgaa 567 Query: 408 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 467 || | ||| || ||||| ||||| | | |||||||||||| || ||||||||||| || Sbjct: 566 tgttcggcgataggtgttaacatacttcctgacatcatcatcttttccaaggttgaagag 507 Query: 468 cttcttgatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaag 527 ||| | ||||| |||||||| |||||||| ||||| || || || |||||||| || || Sbjct: 506 cttgctaatcttggaagcccttttgggtcctctcattctaggtttttcagtgtctgtcag 447 Query: 528 gcctggtagatcattctcacccttcttgacaa 559 || || ||||||||||| |||||||| |||| Sbjct: 446 tccaggaagatcattctctcccttcttcacaa 415
>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 692 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 288 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 347 ||||||||| |||||||||||||| |||||||| || | ||||||||||||||| || || Sbjct: 363 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtaaatgg 304 Query: 348 agtcacaagacgc-tggatcttgggggccttgctcaccttctttcccttcttgtt 401 |||||| | || |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 303 agtcaccaagcgtgtggatcttaggacccttgctaaccttcttgcccttcttgtt 249
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 200 tcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgcaagcagct 259 |||| |||| ||||||||| ||||| |||||||||||||||| || |||||| || | Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534 Query: 260 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattc 319 | || |||||||| |||||||| || |||||| || ||||||||||| || ||||||| Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474 Query: 320 tggcacgcttcctctggagggtcaagggagt 350 | || |||||||| ||||| ||||| ||||| Sbjct: 473 ttgctcgcttcctttggagtgtcaaaggagt 443
>gb|AY105798.1| Zea mays PCO089449 mRNA sequence Length = 777 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 229 ctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttc 288 ||||| |||||||||||||| ||||| ||||| |||||||| |||||||| || |||| Sbjct: 725 ctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcaga---cttc 669 Query: 289 ttggcgatcctcttcttcttg 309 ||||||||||||||||||||| Sbjct: 668 ttggcgatcctcttcttcttg 648
>emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 222 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 163 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 162 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 103 Query: 419 atgtgttgacatagctgcggacatcatcatcctt 452 | |||||||||||| | | ||||||||| ||||| Sbjct: 102 aagtgttgacataggtcctgacatcatcttcctt 69
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 359 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 418 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 485 Query: 419 atgtgttgacatagctgcggacatcatcatcctt 452 | |||||||||||| | | ||||||||| ||||| Sbjct: 484 aagtgttgacataggtcctgacatcatcttcctt 451
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 415 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 474 ||||| ||||||||||| | | ||||||||| |||||| ||| ||||| ||||| || Sbjct: 535 cggtaagtgttgacatacttcctgacatcatcttccttggaaagattgaagagctttctg 476 Query: 475 atcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggt 534 ||||| |||||||| |||||||| |||||||| ||||| || ||||| || || || || Sbjct: 475 atcttggaagcccttttgggtcctctcatccttggcttttcggtgtcggtgagtccaggc 416 Query: 535 agatcattctcaccctt 551 ||||||||||| ||||| Sbjct: 415 agatcattctccccctt 399 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 250 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 309 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 700 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 641 Query: 310 tcggcaattct 320 || |||||||| Sbjct: 640 tcagcaattct 630
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 187 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 246 ||||| || |||||||| |||| |||||||| ||||| || ||||||||||||| ||| Sbjct: 778 agcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaacctg 719 Query: 247 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 306 ||||| || |||||||||||||| ||||| || || |||||| |||||||||||| Sbjct: 718 gaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttcttc 659 Query: 307 ttgtcggcaattctggcacgctt 329 || || |||||||| || ||||| Sbjct: 658 ttatcagcaattcttgcccgctt 636 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 499 ctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcacccttcttgaca 558 |||||||| ||||||||| ||||| | ||||||| |||||||||||| ||||| ||| Sbjct: 466 ctcatccttggcttctcaacatcagtcaatcctggtaaatcattctcacctttcttcaca 407 Query: 559 a 559 | Sbjct: 406 a 406
>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds Length = 426 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 474 gatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctgg 533 |||||| || || ||||| |||||||||||||| |||||||| || || ||||| || || Sbjct: 378 gatcttggacgctctcttaggtcccctcatccttggcttctcggtatcggtaagcccggg 319 Query: 534 tagatcattctcacccttcttgacaa 559 ||||| ||||||||||||||||||| Sbjct: 318 aagatccttctcacccttcttgacaa 293
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 415 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 474 ||||||||||||||||| | | |||||||||||||| || ||||| ||||| | Sbjct: 18918 cggtatgtgttgacatacttcctcacatcatcatccttagacagattgaacagcttgcgg 18859 Query: 475 atcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggt 534 || || |||||||||||||| ||||||||||| ||||||||| ||||| | ||| ||| Sbjct: 18858 attttagaagccctcttgggacccctcatccttggcttctcaacatcagtcaagccaggt 18799 Query: 535 agatcattctcacccttcttgacaa 559 | |||||| ||||||||||| |||| Sbjct: 18798 aaatcattgtcacccttcttcacaa 18774 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 211 ctctcactccggcgatccctctgctccttcagcctctgtgcaagcagcttctggtactct 270 ||||| || ||||| |||||||||||||||| ||| ||||| || |||||||| ||| Sbjct: 19580 ctctcgctacggcgttccctctgctccttcaacctggaggcaagtagtttctggtattct 19521 Query: 271 gcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattctggcacgcttc 330 || |||||||| || ||||| || ||||||||||| || |||||||| || | |||| Sbjct: 19520 gctgcctctgattttgctttggcaattctcttcttcttatctgcaattcttgccctcttc 19461 Query: 331 ctctggagggtcaagggagtcacaagacgctggatcttgggggccttgctcacctt 386 || || || |||| ||||| || | ||||| ||||| || || ||||||||||| Sbjct: 19460 ctttgaagtgtcagaggagtgaccaatcgctgaatcttaggagctttgctcacctt 19405
>ref|XM_570222.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s6-b (CND02780) partial mRNA Length = 825 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 325 cgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggccttg 378 |||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 587 cgcttcctctggagacgcaagggggtgacaagacgctggatcttgggggccttg 534
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 112399 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 112458 Query: 359 gctggatcttgggggccttgct 380 ||||||||| ||||| ||||| Sbjct: 112459 tctggatcttaggggctttgct 112480 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 474 gatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctgg 533 |||||| || || ||||| ||||| ||||| || ||||||||||| || ||||| || || Sbjct: 112668 gatcttggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccagg 112727 Query: 534 tagatcattctcacccttcttgacaa 559 ||||| |||||||||||||| |||| Sbjct: 112728 aagatcgttctcacccttcttcacaa 112753
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 299 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 358 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 40872 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 40813 Query: 359 gctggatcttgggggccttgct 380 ||||||||| ||||| ||||| Sbjct: 40812 tctggatcttaggggctttgct 40791 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 474 gatcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctgg 533 |||||| || || ||||| ||||| ||||| || ||||||||||| || ||||| || || Sbjct: 40603 gatcttggaggctctctttggtcctctcattcttggcttctcagtatcggtaagcccagg 40544 Query: 534 tagatcattctcacccttcttgacaa 559 ||||| |||||||||||||| |||| Sbjct: 40543 aagatcgttctcacccttcttcacaa 40518
>ref|XM_654476.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1964.2), mRNA Length = 714 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 345 gggagtcacaagacgctggatcttgggggccttg 378 ||||||||| |||||||||||||||||||||||| Sbjct: 546 gggagtcaccagacgctggatcttgggggccttg 513
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 231 ctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctg 280 |||||||||||||||||| | |||||||| ||||||||||| ||||||| Sbjct: 731 ctgctccttcagcctctggacgagcagcttgtggtactctgctgcctctg 682
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 58.0 bits (29), Expect = 3e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 415 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 474 ||||| ||||||||||| | | |||||||||||||||| || ||||| ||||| | Sbjct: 135508 cggtaggtgttgacatacttcctgacatcatcatccttggacagattgaagagcttacgg 135567 Query: 475 atcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggt 534 || || ||||||||||| || |||||||| |||||||| ||| ||||| | ||||| Sbjct: 135568 attttggaagccctcttaggacccctcattctgggcttttcaacatcagtcaaacctggc 135627 Query: 535 agatcattctcacccttcttgacaa 559 | |||||| ||||||||||| |||| Sbjct: 135628 aaatcattttcacccttcttcacaa 135652 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 211 ctctcactccggcgatccctctgctccttca 241 |||||||| ||||| |||||||||||||||| Sbjct: 134320 ctctcactgcggcgttccctctgctccttca 134350
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 58.0 bits (29), Expect = 3e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 415 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 474 ||||| ||||||||||| | | |||||||||||||||| || ||||| ||||| | Sbjct: 94045 cggtaggtgttgacatacttcctgacatcatcatccttggacagattgaagagcttacgg 93986 Query: 475 atcttcgaagccctcttgggtcccctcatcctgggcttctcagtgtcagtaaggcctggt 534 || || ||||||||||| || |||||||| |||||||| ||| ||||| | ||||| Sbjct: 93985 attttggaagccctcttaggacccctcattctgggcttttcaacatcagtcaaacctggc 93926 Query: 535 agatcattctcacccttcttgacaa 559 | |||||| ||||||||||| |||| Sbjct: 93925 aaatcattttcacccttcttcacaa 93901 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 211 ctctcactccggcgatccctctgctccttca 241 |||||||| ||||| |||||||||||||||| Sbjct: 95233 ctctcactgcggcgttccctctgctccttca 95203
>gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 mRNA, complete cds Length = 760 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 349 gtcacaagacgctggatcttgggggccttgctc 381 ||||| ||||||||||||||||||||||||||| Sbjct: 549 gtcaccagacgctggatcttgggggccttgctc 517
>gb|AF525803.1| Chlamys farreri ribosomal protein S6-like mRNA, partial sequence Length = 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 346 ggagtcacaagacgctggatcttgggggcctt 377 ||||||||||| |||||||||||||||||||| Sbjct: 300 ggagtcacaagtcgctggatcttgggggcctt 269
>ref|XM_751713.1| Ustilago maydis 521 hypothetical protein (UM00659.1) partial mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 349 gtcacaagacgctggatcttgggggccttg 378 ||||||||||||||||||||||| |||||| Sbjct: 611 gtcacaagacgctggatcttgggagccttg 582
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 345 gggagtcacaagacgctggatcttgggggccttg 378 |||||| || |||||||||||||||||||||||| Sbjct: 546 gggagtgaccagacgctggatcttgggggccttg 513
>dbj|AB226198.1| Aspergillus oryzae cDNA, contig sequence: AoEST3057 Length = 1185 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 |||||||||||||||||||||||| Sbjct: 659 agacgctggatcttgggggccttg 636
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 |||||||||||||||||||||||| Sbjct: 3098267 agacgctggatcttgggggccttg 3098244
>emb|AJ438987.1|PLI438987 Paracentrotus lividus mRNA for S6 ribosomal protein (rps6 gene) Length = 983 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 |||||||||||||||||||||||| Sbjct: 564 agacgctggatcttgggggccttg 541
>gb|AY752838.1| Culicoides sonorensis clone CsRPS6A ribosomal protein S6 mRNA, partial cds Length = 1086 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 537 atcattctcacccttcttgacaa 559 ||||||||||||||||||||||| Sbjct: 378 atcattctcacccttcttgacaa 356
>gb|AY237125.1| Telmatoscopus sp. AMF-2003 ribosomal protein S6 mRNA, partial cds Length = 599 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 432 gctgcggacatcatcatccttgccaaggttgaaaagctt 470 ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 243 gctgcggacatcatcctccttgctcaggttgaacagctt 205
>gb|AY095266.1| Culicoides sonorensis RPS6 mRNA, partial cds Length = 804 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 537 atcattctcacccttcttgacaa 559 ||||||||||||||||||||||| Sbjct: 96 atcattctcacccttcttgacaa 74
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 493 ggtcccctcatcctgggcttctcagtgtcagtaaggcctggtagatcattctcaccctt 551 ||||| |||||||| || || |||||||| || || || || ||||||||||||||||| Sbjct: 528 ggtcctctcatccttggtttttcagtgtctgtcagtccaggcagatcattctcaccctt 586 Score = 46.1 bits (23), Expect = 0.13 Identities = 86/107 (80%) Strand = Plus / Plus Query: 250 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 309 ||||| |||||||| || || || ||||| ||||| |||||| || ||||||||||| Sbjct: 300 gcaagaagcttctgatattcagctgcctccgacttagccttggcaattctcttcttctta 359 Query: 310 tcggcaattctggcacgcttcctctggagggtcaagggagtcacaag 356 || |||||||| || | ||| || || || |||||||| |||||||| Sbjct: 360 tcagcaattcttgccctctttctttgaagagtcaagggtgtcacaag 406
>ref|XM_360693.1| Magnaporthe grisea 70-15 hypothetical protein (MG03236.4) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 345 gggagtcacaagacgctggatcttgggggccttg 378 |||||| || || ||||||||||||||||||||| Sbjct: 552 gggagtaaccaggcgctggatcttgggggccttg 519
>ref|XM_867656.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S6 (LOC508350), partial mRNA Length = 709 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 ggagtcacaagacgctggatcttggg 371 ||||||||||||||||| |||||||| Sbjct: 464 ggagtcacaagacgctgaatcttggg 439
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 533 cgctggatcttgggggccttg 513
>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence Length = 203583 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 atccctctgctccttcagcctctgt 249 |||||||| |||||||||||||||| Sbjct: 84827 atccctctcctccttcagcctctgt 84851
>gb|AC067728.25| Homo sapiens 3 BAC RP11-117F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86751 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 ctttcccttcttgttaaggaa 407 ||||||||||||||||||||| Sbjct: 79815 ctttcccttcttgttaaggaa 79835
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tccctctgctccttcagcctc 246 ||||||||||||||||||||| Sbjct: 21454 tccctctgctccttcagcctc 21474
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tccctctgctccttcagcctc 246 ||||||||||||||||||||| Sbjct: 130125 tccctctgctccttcagcctc 130145
>emb|CT033435.1| Platynereis dumerilii EST IB0AAA20BE05EM1 Length = 829 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT033434.1| Platynereis dumerilii EST IB0AAA20BE05FM1 Length = 830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 259 cgctggatcttgggggccttg 279
>emb|CT033340.1| Platynereis dumerilii EST IB0AAA22BC10EM1 Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 614 cgctggatcttgggggccttg 594
>emb|CT033339.1| Platynereis dumerilii EST IB0AAA22BC10FM1 Length = 837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 258 cgctggatcttgggggccttg 278
>emb|CT033115.1| Platynereis dumerilii EST IB0AAA26BH05EM1 Length = 406 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 150 cgctggatcttgggggccttg 130
>emb|CT033114.1| Platynereis dumerilii EST IB0AAA26BH05FM1 Length = 406 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 257 cgctggatcttgggggccttg 277
>emb|CT032815.1| Platynereis dumerilii EST IB0AAA31AB08EM1 Length = 841 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032814.1| Platynereis dumerilii EST IB0AAA31AB08FM1 Length = 818 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 273 cgctggatcttgggggccttg 293
>emb|CT032774.1| Platynereis dumerilii EST IB0AAA31DB11EM1 Length = 813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032738.1| Platynereis dumerilii EST IB0AAA32CB08EM1 Length = 796 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 522 cgctggatcttgggggccttg 502
>emb|CT032539.1| Platynereis dumerilii EST IB0AAA36DA11EM1 Length = 844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032538.1| Platynereis dumerilii EST IB0AAA36DA11FM1 Length = 728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 276 cgctggatcttgggggccttg 296
>emb|CT032484.1| Platynereis dumerilii EST IB0AAA37CB10EM1 Length = 827 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT032483.1| Platynereis dumerilii EST IB0AAA37CB10FM1 Length = 691 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 256 cgctggatcttgggggccttg 276
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgctggatcttgggggccttg 378 ||||||||||||||||||||| Sbjct: 2505326 cgctggatcttgggggccttg 2505346
>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence Length = 168540 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cttcttggcgatcctcttct 304 |||||||||||||||||||| Sbjct: 18677 cttcttggcgatcctcttct 18658
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 caccttctttcccttcttgt 400 |||||||||||||||||||| Sbjct: 703729 caccttctttcccttcttgt 703748 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 caccttctttcccttcttgt 400 |||||||||||||||||||| Sbjct: 642024 caccttctttcccttcttgt 642005
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tcctctggagggtcaaggga 348 |||||||||||||||||||| Sbjct: 136138 tcctctggagggtcaaggga 136119
>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence Length = 190381 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cctcatcctgggcttctcag 517 |||||||||||||||||||| Sbjct: 137070 cctcatcctgggcttctcag 137089
>ref|XM_842713.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0783) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 caccttctttcccttcttgt 400 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>ref|XM_842723.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0793) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 caccttctttcccttcttgt 400 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence Length = 193083 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cctcatcctgggcttctcag 517 |||||||||||||||||||| Sbjct: 98693 cctcatcctgggcttctcag 98712
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcttggccatgctctcac 217 |||||||||||||||||||| Sbjct: 82373 cctcttggccatgctctcac 82354
>ref|XM_775406.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 1 (LOC577989), mRNA Length = 940 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 564 agacgctggatcttgggtgccttg 541
>ref|XM_796910.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 5 (LOC577989), mRNA Length = 916 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 540 agacgctggatcttgggtgccttg 517
>emb|AJ439463.2|OOS439463 Ostertagia ostertagi mRNA for metalloprotease I (metal I gene) Length = 1772 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 catcatcatccttgccaagg 459 |||||||||||||||||||| Sbjct: 1225 catcatcatccttgccaagg 1206
>emb|AJ419180.1|OOS419180 Ostertagia ostertagi partial mRNA for metalloprotease Length = 1238 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 catcatcatccttgccaagg 459 |||||||||||||||||||| Sbjct: 1150 catcatcatccttgccaagg 1131
>emb|CR938364.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YB17AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 852 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 579 agacgctggatcttgggtgccttg 556
>emb|CR938363.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YB17BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 805 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 621 agacgctggatcttgggtgccttg 644
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cctcatcctgggcttctcag 517 |||||||||||||||||||| Sbjct: 199938 cctcatcctgggcttctcag 199957
>gb|DQ399013.1| Ictalurus punctatus clone SAE03 hypothetical protein mRNA, partial cds Length = 539 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aagcagagacagccggagcc 171 |||||||||||||||||||| Sbjct: 89 aagcagagacagccggagcc 108
>gb|AF154067.1|AF154067 Aedes aegypti ribosomal protein S6 mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggtgccttg 516
>gb|AF154066.1|AF154066 Aedes albopictus ribosomal protein S6 (rpS6) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggagccttg 516
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tcggcaattctggcacgctt 329 |||||||||||||||||||| Sbjct: 4123462 tcggcaattctggcacgctt 4123443
>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence Length = 177771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tcctctggagggtcaaggga 348 |||||||||||||||||||| Sbjct: 7942 tcctctggagggtcaaggga 7923
>gb|AY924261.1| Aedes aegypti ribosomal protein S6 gene, partial cds Length = 1476 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 agacgctggatcttgggggccttg 378 ||||||||||||||||| |||||| Sbjct: 1087 agacgctggatcttgggtgccttg 1064
>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete sequence Length = 303641 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cttcttggcgatcctcttct 304 |||||||||||||||||||| Sbjct: 202386 cttcttggcgatcctcttct 202367
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggcgatcctcttcttcttgtcggc 314 ||||||| |||||||||||||||| Sbjct: 3860237 ggcgatcgtcttcttcttgtcggc 3860260
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence Length = 165737 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcttggccatgctctcac 217 |||||||||||||||||||| Sbjct: 14193 cctcttggccatgctctcac 14212
>gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 DS07066 (D70)), complete sequence Length = 77798 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cttcttggcgatcctcttct 304 |||||||||||||||||||| Sbjct: 64172 cttcttggcgatcctcttct 64191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,535,904 Number of Sequences: 3902068 Number of extensions: 5535904 Number of successful extensions: 119842 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119389 Number of HSP's gapped (non-prelim): 433 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
