ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38c15 |
|---|---|
| Clone Library Name | barley_pub |
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 79.3 bits (194), Expect = 8e-15 Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 601 KKTTKLYYAMRVLESYESSEGRDPG-ETSLSDLPALLARKKDMCDRMSLDESKVPTSLLE 425 K+TT Y+ ++VL + + +GRDP +T D LL + D+ D + + +P + Sbjct: 234 KRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSELLLQIRNDVLDSLGISPDLLPEDFVR 293 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGKGVMEDIPP 257 + E PVCA++GGIL QE++K++S + P NFF+FD G G++E + P Sbjct: 294 YCFS----EMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNGIVECLGP 345
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 77.0 bits (188), Expect = 4e-14 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 601 KKTTKLYYAMRVLESYESSEGRDP-GETSLSDLPALLARKKDMCDRMSLDESKVPTSLLE 425 K+T Y+ ++VL + + +GRDP E+ D LL + D+ D + + +P + Sbjct: 238 KRTAPDYFLLQVLLKFRTDKGRDPTSESYKEDAELLLQIRNDVFDSLGISPDLLPDDFVR 297 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGKGVMEDIPP 257 + E PVCA++GGIL QE++K++S + P NFF+FD G G++E + P Sbjct: 298 YCFS----EMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGSGIVECLGP 349
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 52.8 bits (125), Expect = 8e-07 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 4/118 (3%) Frame = -2 Query: 586 LYYAMRVLESYESSEGRDPG----ETSLSDLPALLARKKDMCDRMSLDESKVPTSLLERL 419 L+ A + L+ ++ GR P E + S L A + DR LD + L + Sbjct: 329 LHLAFQALDKFKKDHGRCPAAGCEEDAHSFLKIAAAINEASADR-KLDT--IDEKLFRQF 385 Query: 418 LAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGKGVMEDIPPTPED 245 + + P+ A+ GGI+GQEV+K+ S K +P+ FFYFD+ + + P P+D Sbjct: 386 ASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLNQFFYFDSVES---LPTYPLEPQD 440
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Frame = -2 Query: 586 LYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLDE-SKVPTSLLERLLAA 410 L+ A + L+ + + R P S D+ ++ + D + + ++ LL + Sbjct: 326 LHLAFQALDKFRTELSRFPVAGSTDDVQRVIEYAISINDTLGDRKLEEIDKKLLHHFASG 385 Query: 409 GKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 + P+ A+ GGI+GQEV+K+ S K +P+ FFYFD+ + Sbjct: 386 SRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVE 426
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Frame = -2 Query: 586 LYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLDE-SKVPTSLLERLLAA 410 L+ A + L+ + + R P S D+ ++ + D + + ++ LL + Sbjct: 326 LHLAFQALDKFRTELSRFPVAGSTDDVQRVIEYAISINDTLGDRKLEEIDKKLLHHFASG 385 Query: 409 GKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 + P+ A+ GGI+GQEV+K+ S K +P+ FFYFD+ + Sbjct: 386 SRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVE 426
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 46.2 bits (108), Expect = 8e-05 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = -2 Query: 598 KTTKLYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRM--SLDESKVPTSLLE 425 + +L+ + L + + GR P + D L+A + + R ++ ++ + L+ Sbjct: 325 RPAQLHIGFQALHQFCAQHGRPPRPRNEEDAAELVALAQAVNARALPAVQQNNLDEDLIR 384 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 +L + P+ A +GG+ QEV+K+ S K PI + YFDA + Sbjct: 385 KLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALE 430
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 43.5 bits (101), Expect = 5e-04 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Frame = -2 Query: 598 KTTKLYYAMRVLESYESSEGRDPGETSLSDLPAL--LARKKDMCDRMSLDESKVPTSLLE 425 + +L+ + L + + R P + D L LAR + ++ + + L+ Sbjct: 325 RPAQLHIGFQALHKFCAQHSRPPRPRNEEDAAELVTLARAVNSKASSAVQQDSLDEDLIR 384 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 L + P+ A +GG+ QEV+K+ S K PI + YFDA + Sbjct: 385 NLAFVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALE 430
>ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit| Length = 524 Score = 43.1 bits (100), Expect = 7e-04 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Frame = -2 Query: 610 DLSKKTTKLYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLD---ESKVP 440 +L T +A+R E + S G PGE + + R K + +M D + + Sbjct: 409 ELQGNLTAYNFALRAYERFLSECGNIPGECIVEQD---IGRLKSIAAKMLSDLGMHATIS 465 Query: 439 TSLLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGKGV 275 +L + G E V A +GG QEVIK I+ + PI N F ++A + V Sbjct: 466 DDVLHEICRYGGAELHAVSAFIGGCAAQEVIKIITKQYKPIDNTFIYNAITTESV 520
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/53 (37%), Positives = 31/53 (58%) Frame = -2 Query: 445 VPTSLLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 V L++ L + + P V A GG++ QEV+K+ S K P+K F YFD+ + Sbjct: 343 VNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLE 395
>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31| Length = 307 Score = 42.0 bits (97), Expect = 0.001 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Frame = -2 Query: 607 LSKKTTKLYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLDESKVPTS-L 431 L+KK LY AM L + S DP + +C L+E V Sbjct: 207 LAKKIPTLYPAMLSLLKSKKS---DPDSI------------RQVCIEQKLNEKTVLNGEF 251 Query: 430 LERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADG 284 L + + + PV +++GG++ Q+ + SIS K PI NF+ FDA G Sbjct: 252 LSKFSSNISFQWTPVMSVVGGVVSQDALNSISKKQFPIDNFWIFDAESG 300
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = -2 Query: 598 KTTKLYYAMRVLESYESSEGRDPGETSLSDLPAL--LARKKDMCDRMSLDESKVPTSLLE 425 + +L+ + L + + + P + D L LA+ + S+ ++ + L+ Sbjct: 325 RPAQLHIGFQALHQFCALHNQPPRPRNEEDATELVGLAQAVNARSPPSVKQNSLDEDLIR 384 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 +L + P+ A +GG+ QEV+K+ S K PI + YFDA + Sbjct: 385 KLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALE 430
>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)| Length = 347 Score = 40.0 bits (92), Expect = 0.006 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = -2 Query: 475 CDRMSLDESKVPTSLLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFD 296 C+ + + + V +++ + E PV AI+GG + Q+VI + + +P+ NF FD Sbjct: 277 CENLGVPATVVKDDYIQQFIKQKGIEFAPVAAIIGGAVAQDVINILGKRLSPLNNFIVFD 336 Query: 295 AADGKGVMEDIP 260 G+ D+P Sbjct: 337 -----GITLDMP 343
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 38.1 bits (87), Expect = 0.022 Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Frame = -2 Query: 583 YYAMRVLESY-ESSEGRDPGETSLSDLPALLARKKDMCDRMSLDESKVPTSLLERLLAAG 407 + A + L ++ ++ EG P + D K + + D ++ L++ + Sbjct: 292 HIAFQALSAFADAHEGSLPRPRNDIDAAEFFEFCKKIASTLQFDV-ELDEKLIKEISYQA 350 Query: 406 KKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAAD 287 + + + A LGG + QEV+K+ + K P+K +FYFD+ + Sbjct: 351 RGDLVAMSAFLGGAVAQEVLKATTSKFYPLKQYFYFDSLE 390
>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit| (Auxin-resistance protein AXR1) Length = 540 Score = 38.1 bits (87), Expect = 0.022 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (2%) Frame = -2 Query: 583 YYAMRVLESYESSEGRDPGETSLS---DLPALLARKKDMCDRMSLDESKVPTSLLERLLA 413 Y +R + + ++ + PG+ D+ L + + + S +P L+ + Sbjct: 431 YILLRAADRFAANYNKFPGQFDGGMDEDISRLKTTALSLLTDLGCNGSVLPDDLIHEMCR 490 Query: 412 AGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGK 281 G E V A +GGI QEVIK ++ + P+ + F+ D K Sbjct: 491 FGASEIHVVSAFVGGIASQEVIKLVTKQFVPMLGTYIFNGIDHK 534
>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) Length = 541 Score = 35.8 bits (81), Expect = 0.11 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 10/103 (9%) Frame = -2 Query: 574 MRVLESYESSEGRDPGETSLS---DLPALLARKKDMCDRMSLDE-------SKVPTSLLE 425 MR + ++ +GR PG + D L R + + DE +KV + + Sbjct: 428 MRAVGRFQKEKGRYPGTNGVPVSIDAQDLKKRVEVLIREALKDEQDFTSISNKVTDTAIA 487 Query: 424 RLLAAGKKEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFD 296 + G E + + +GGI QE+IK + + PI N F FD Sbjct: 488 EICRFGAAELHVISSYVGGIAAQEIIKLATNQYVPIDNTFIFD 530
>ULA1_SCHPO (Q9UT93) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) (Ubiquitin-activating enzyme E1-like 1) Length = 500 Score = 34.3 bits (77), Expect = 0.31 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Frame = -2 Query: 577 AMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLDE--SKVPTSLLERLLAAGK 404 A R+ ++ G++ E + SD ++ + ++ L++ V T++ E A G Sbjct: 396 AFRIYDTILEKHGKNYKE-AFSDTTKTISVAQSFLSQIGLEKFFDVVYTAIQELERADGH 454 Query: 403 KEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGK 281 + H + + +GGI+ QE IK ++ + P+ N F FD + Sbjct: 455 ELHS-ISSFIGGIVAQETIKLLAQQYLPLNNTFVFDGVHSR 494
>PROB_NITEU (Q820M4) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 373 Score = 31.2 bits (69), Expect = 2.6 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = -2 Query: 541 GRDPGETSLSDLPALLARKKDMCDRMSLDESKVPTSLLERLLAAGKKEHPP--VCAILGG 368 G G L+D+P +ARK + D + + S V R L +G K P V I G Sbjct: 253 GEAIGTILLADMPVKVARKLWLADHLQVRGSVVLDDGASRALLSGGKSLLPIGVVEIKGE 312 Query: 367 ILGQEVIKSISCKGNPI-KNFFYFDAADGKGVM 272 E I + G I + +DA + + +M Sbjct: 313 FERGEAISCLDASGREIARGLINYDARESRKIM 345
>DNAK_TREDE (Q73Q16) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 646 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -2 Query: 499 LLARKKDMCDRMSLDESKVPTSLLERLLAAGKKEHPPVCAILGGILGQEVIKSIS 335 L R K+ C + D P + + LL G P V I+ I G+E KS++ Sbjct: 306 LFERTKEPCRKALKDAGITPDKIDDILLVGGSTRMPKVLQIIKEIFGKEGSKSVN 360
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 30.0 bits (66), Expect = 5.9 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Frame = -2 Query: 586 LYYAMRVLESYESSEGRDPGETSLS---DLPALLARKKDMCDRMSLDESKVPTSLLERLL 416 LY +R ++ + +GR PG ++ D+ L + L V + Sbjct: 425 LYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVM-VKDDYVHEFC 483 Query: 415 AAGKKEHPPVCAILGGILGQEVIKSIS 335 G E + A LGG QEVIK I+ Sbjct: 484 RYGAAEPHTIAAFLGGAAAQEVIKIIT 510
>SILP_SALTY (Q9ZHC7) Putative cation-transporting P-type ATPase (EC 3.6.3.-)| Length = 824 Score = 30.0 bits (66), Expect = 5.9 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -2 Query: 439 TSLLERLLAAGK-KEHPPVCAILGGILGQEVIKSISCKGNPIKNFFYFDAADGKGVMEDI 263 TSLL A K +HP LG V+K+ KG I +F+A GKGV D+ Sbjct: 535 TSLLRVTAAVDKGSQHP---------LGMAVVKAAQEKGIAIPAVTHFNAPSGKGVSGDV 585
>PROA_NEIG1 (Q5F8D3) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 420 Score = 29.6 bits (65), Expect = 7.7 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = -2 Query: 607 LSKKTTKLYYAMRVLESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLD----ESKVP 440 +S +L A +S +++ + L+ +L A +D+ LD K+P Sbjct: 1 MSNTQKQLALAKAAKKSVNTADAEEKNRALLAMADSLEAAAEDILAANRLDLKAAAGKIP 60 Query: 439 TSLLERLLAAGKKEHPPVCAILGGI 365 S+ +RLL GK+ +CA+ GI Sbjct: 61 DSMTDRLLLDGKR----ICAMADGI 81
>RSR1_VIBCH (O34419) Cryptic phage CTXphi transcriptional repressor rstR| Length = 112 Score = 29.6 bits (65), Expect = 7.7 Identities = 19/75 (25%), Positives = 35/75 (46%) Frame = -2 Query: 562 ESYESSEGRDPGETSLSDLPALLARKKDMCDRMSLDESKVPTSLLERLLAAGKKEHPPVC 383 + YES EG E + AL ++C R + DE++ L+++ ++E + Sbjct: 33 KKYESGEGLPTMENLVKIADALEISIDELCGRWATDENQELMLRLKKIQQLDEEEQKAIS 92 Query: 382 AILGGILGQEVIKSI 338 +L +L + KSI Sbjct: 93 MVLESMLIRHSTKSI 107
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 29.6 bits (65), Expect = 7.7 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Frame = -2 Query: 586 LYYAMRVLESYESSEGRDPGETSLS---DLPALLARKKDMCDRMSLDESKVPTSLLERLL 416 LY +R ++ + GR PG ++ D+ L + L V + Sbjct: 425 LYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVM-VKDDYVHEFC 483 Query: 415 AAGKKEHPPVCAILGGILGQEVIKSIS 335 G E V A LGG QEVIK I+ Sbjct: 484 RYGAAEPHTVAAFLGGAAAQEVIKIIT 510 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,972,650 Number of Sequences: 219361 Number of extensions: 1777385 Number of successful extensions: 4030 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4027 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
