ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37n15 |
|---|---|
| Clone Library Name | barley_pub |
>PCY2_HUMAN (Q99447) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 389 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKKASE 481 DPY PK GIF+ + S +T+ + RII N Y+ RN KK+A E Sbjct: 320 DPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARNQKKEAKE 367
>PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/48 (43%), Positives = 27/48 (56%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKKASE 481 DPY PK GIF + S +T+ + RII N Y+ RN KK+A E Sbjct: 338 DPYQEPKRRGIFYQIDSGSDLTTDLIVQRIIKNRLEYEARNQKKEAKE 385
>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/48 (43%), Positives = 27/48 (56%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKKASE 481 DPY PK GIF + S +T+ + RII N Y+ RN KK+A E Sbjct: 338 DPYEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRLEYEARNQKKEAKE 385
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 32.7 bits (73), Expect = 0.89 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Frame = -2 Query: 369 FYNRLQQLLSYRK*SVIS*WPFGKGNQLKEIN*QTASLLLLPFFGWNVHLTARIHIHDSF 190 F + + +L++ ++IS P G G+QL A+ LLP FG HLT+ I ++ Sbjct: 77 FLDTDRTVLAHAGPTMISPSPIGSGSQLLSSTGTDATRYLLPVFGSQRHLTSPIIPAEAD 136 Query: 189 FTLLSLEGKYSSLNTF---SRPLLYSCMLLLKGL 97 L +E + S T R L S +L+L GL Sbjct: 137 TLLGWVELEISHNGTLLRGYRSLFASLLLILTGL 170
>PCY1A_MOUSE (P49586) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 10/66 (15%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKK----------ASEDK 475 D Y K+ G+F + I++ + TRI+ +++ Y +RNL++ +E K Sbjct: 180 DVYKHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239 Query: 474 YYTQKK 457 Y+ Q++ Sbjct: 240 YHLQER 245
>PCY1A_RAT (P19836) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKK----------ASEDK 475 D Y K G+F + I++ + TRI+ +++ Y +RNL++ +E K Sbjct: 180 DVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239 Query: 474 YYTQKK 457 Y+ Q++ Sbjct: 240 YHLQER 245
>PCY1A_HUMAN (P49585) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKK----------ASEDK 475 D Y K G+F + I++ + TRI+ +++ Y +RNL++ +E K Sbjct: 180 DVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239 Query: 474 YYTQKK 457 Y+ Q++ Sbjct: 240 YHLQER 245
>PCY1A_CRIGR (P49584) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKKK----------ASEDK 475 D Y K G+F + I++ + TRI+ +++ Y +RNL++ +E K Sbjct: 180 DVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239 Query: 474 YYTQKK 457 Y+ Q++ Sbjct: 240 YHLQER 245
>PCY1B_RAT (Q9QZC4) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 30.0 bits (66), Expect = 5.8 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKK----KASEDKYYTQKK 457 D Y K G+F + I++ + TRI+ +++ Y +RNL++ K + +KK Sbjct: 180 DVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239 Query: 456 F 454 + Sbjct: 240 Y 240
>Y1681_METJA (Q59075) Hypothetical protein MJ1681| Length = 380 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +3 Query: 138 C*RCSAMNISPPGIIK*KKNHVCEFLLLSGHSSRKRA 248 C C NI P G+ K K VC + S RKRA Sbjct: 326 CFGCGVCNICPYGVFKTKLGSVCGIPITCRQSDRKRA 362
>PCY1B_HUMAN (Q9Y5K3) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -2 Query: 624 DPYALPKNMGIFQVVTSPKTITSVSVATRIIDNHEAYKKRNLKK 493 D Y K G+F + I++ + TRI+ +++ Y +RNL++ Sbjct: 180 DVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQR 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,181,282 Number of Sequences: 219361 Number of extensions: 1401609 Number of successful extensions: 3052 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3051 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
