ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37n15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Minus Query: 450 agacaaatttcttttgcgtgtagtacttgtcctcactcgccttctttttcaagtttcttt 509 |||||||||||||||| |||||||| | || || || ||||||||||||||||| |||| Sbjct: 1276 agacaaatttcttttgtgtgtagtatctatcttcgcttgccttctttttcaagttccttt 1217 Query: 510 tcttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgttt 569 ||||||| ||||||||||||||||||||||| ||||| || ||||| | |||||| | || Sbjct: 1216 tcttgtaagcttcatggttatcaattattctggtagcaactgaaactgttgttataggtt 1157 Query: 570 tggggcttgtgactacttggaaaatacccatattctttggaagggcatacggatca 625 |||||||||||| | |||||| |||||||| ||||||||| ||| || |||||| Sbjct: 1156 tggggcttgtgattgtttggaagatacccatgctctttggaacggcgtatggatca 1101
>dbj|AK099943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121N21, full insert sequence Length = 1900 Score = 133 bits (67), Expect = 8e-28 Identities = 148/175 (84%) Strand = Plus / Minus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 1441 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 1382 Query: 497 ttcaagtttcttttcttgtacgcttcatggttatcaattattcttgtagcgaccgaaaca 556 |||||||| ||||||||||| |||||||||||||| |||||||| ||||| || ||||| Sbjct: 1381 ttcaagttccttttcttgtaagcttcatggttatcgattattctggtagccactgaaact 1322 Query: 557 gatgttattgttttggggcttgtgactacttggaaaatacccatattctttggaa 611 | |||||| | ||||| |||||||| | |||||| |||||||| ||||||||| Sbjct: 1321 gttgttataggtttggtgcttgtgattgtttggaagatacccatgctctttggaa 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 105/119 (88%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 62 gtacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaa 121 |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 1827 gtacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaa 1768 Query: 122 gaatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 | ||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||| Sbjct: 1767 gtatacaacaatggtttgctgagcacctgttcagctatgaatattgtcccctccaggga 1709 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 194 gaatcatgtatgtgaattcttgctgttaagtgga 227 |||||||||||||||||||| ||||||||||||| Sbjct: 1685 gaatcatgtatgtgaattctggctgttaagtgga 1652 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand = Plus / Minus Query: 271 ttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactgacta 330 |||||||| |||||||||||| ||||| ||| ||||||||||||| |||| |||||||| Sbjct: 1621 ttaatttagttccttgagctggttccc-atgctgaatggccatcaa-ttataactgacta 1564 Query: 331 ----ctttctatagctgagcaattgttgcaatct 360 ||||||||||| ||| || ||||| ||||| Sbjct: 1563 tgacctttctatagccgagtaactgttgaaatct 1530
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 111 bits (56), Expect = 3e-21 Identities = 105/119 (88%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 62 gtacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaa 121 |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 38064 gtacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaa 38123 Query: 122 gaatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 | ||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||| Sbjct: 38124 gtatacaacaatggtttgctgagcacctgttcagctatgaatattgtcccctccaggga 38182 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| |||||||||||||| |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 38640 cttgtaagcttcatggttatcgattattctggtagccactgaaactgttgttataggttt 38699 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaa 611 || |||||||| | |||||| |||||||| ||||||||| Sbjct: 38700 ggtgcttgtgattgtttggaagatacccatgctctttggaa 38740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 38450 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 38509 Query: 497 ttcaagtttcttttct 512 |||||||| ||||||| Sbjct: 38510 ttcaagttccttttct 38525 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 194 gaatcatgtatgtgaattcttgctgttaagtgga 227 |||||||||||||||||||| ||||||||||||| Sbjct: 38206 gaatcatgtatgtgaattctggctgttaagtgga 38239 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand = Plus / Plus Query: 271 ttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactgacta 330 |||||||| |||||||||||| ||||| ||| ||||||||||||| |||| |||||||| Sbjct: 38270 ttaatttagttccttgagctggttccc-atgctgaatggccatcaa-ttataactgacta 38327 Query: 331 ----ctttctatagctgagcaattgttgcaatct 360 ||||||||||| ||| || ||||| ||||| Sbjct: 38328 tgacctttctatagccgagtaactgttgaaatct 38361
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 111 bits (56), Expect = 3e-21 Identities = 105/119 (88%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 62 gtacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaa 121 |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 12238908 gtacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaa 12238967 Query: 122 gaatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 | ||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||| Sbjct: 12238968 gtatacaacaatggtttgctgagcacctgttcagctatgaatattgtcccctccaggga 12239026 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| |||||||||||||| |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 12239484 cttgtaagcttcatggttatcgattattctggtagccactgaaactgttgttataggttt 12239543 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaa 611 || |||||||| | |||||| |||||||| ||||||||| Sbjct: 12239544 ggtgcttgtgattgtttggaagatacccatgctctttggaa 12239584 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 12239294 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 12239353 Query: 497 ttcaagtttcttttct 512 |||||||| ||||||| Sbjct: 12239354 ttcaagttccttttct 12239369 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 194 gaatcatgtatgtgaattcttgctgttaagtgga 227 |||||||||||||||||||| ||||||||||||| Sbjct: 12239050 gaatcatgtatgtgaattctggctgttaagtgga 12239083 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand = Plus / Plus Query: 271 ttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactgacta 330 |||||||| |||||||||||| ||||| ||| ||||||||||||| |||| |||||||| Sbjct: 12239114 ttaatttagttccttgagctggttccc-atgctgaatggccatcaa-ttataactgacta 12239171 Query: 331 ----ctttctatagctgagcaattgttgcaatct 360 ||||||||||| ||| || ||||| ||||| Sbjct: 12239172 tgacctttctatagccgagtaactgttgaaatct 12239205
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 111 bits (56), Expect = 3e-21 Identities = 105/119 (88%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 62 gtacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaa 121 |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 12246248 gtacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaa 12246307 Query: 122 gaatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 | ||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||| Sbjct: 12246308 gtatacaacaatggtttgctgagcacctgttcagctatgaatattgtcccctccaggga 12246366 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| |||||||||||||| |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 12246824 cttgtaagcttcatggttatcgattattctggtagccactgaaactgttgttataggttt 12246883 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaa 611 || |||||||| | |||||| |||||||| ||||||||| Sbjct: 12246884 ggtgcttgtgattgtttggaagatacccatgctctttggaa 12246924 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 12246634 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 12246693 Query: 497 ttcaagtttcttttct 512 |||||||| ||||||| Sbjct: 12246694 ttcaagttccttttct 12246709 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 194 gaatcatgtatgtgaattcttgctgttaagtgga 227 |||||||||||||||||||| ||||||||||||| Sbjct: 12246390 gaatcatgtatgtgaattctggctgttaagtgga 12246423 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand = Plus / Plus Query: 271 ttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactgacta 330 |||||||| |||||||||||| ||||| ||| ||||||||||||| |||| |||||||| Sbjct: 12246454 ttaatttagttccttgagctggttccc-atgctgaatggccatcaa-ttataactgacta 12246511 Query: 331 ----ctttctatagctgagcaattgttgcaatct 360 ||||||||||| ||| || ||||| ||||| Sbjct: 12246512 tgacctttctatagccgagtaactgttgaaatct 12246545
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 109 bits (55), Expect = 1e-20 Identities = 104/118 (88%), Gaps = 3/118 (2%) Strand = Plus / Minus Query: 63 tacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaag 122 ||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||| Sbjct: 7603807 tacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaag 7603748 Query: 123 aatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 |||||||| |||| |||||| | |||||||||||||||||| ||||||||||||| Sbjct: 7603747 tatacaacagtggtttgctgagcacctgttcagcgatgaatattgtcccctccaggga 7603690 Score = 93.7 bits (47), Expect = 7e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| ||||||||||||||||||||||| ||||| || ||||| | |||||| | ||| Sbjct: 7603257 cttgtaagcttcatggttatcaattattctggtagcaactgaaactgttgttataggttt 7603198 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaagggcatacggatca 625 ||||||||||| | |||||| |||||||| ||||||||| ||| || |||||| Sbjct: 7603197 ggggcttgtgattgtttggaagatacccatgctctttggaacggcgtatggatca 7603143 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 7603450 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 7603391 Query: 497 ttcaagtttcttttct 512 |||||||| ||||||| Sbjct: 7603390 ttcaagttccttttct 7603375 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/97 (84%), Gaps = 6/97 (6%) Strand = Plus / Minus Query: 268 ctgttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactga 327 ||||||||||| |||||||||||| ||||| || ||||||||||||| |||| ||||| Sbjct: 7603634 ctgttaatttagttccttgagctggttccc-atgatgaatggccatcaa-ttataactga 7603577 Query: 328 cta----ctttctatagctgagcaattgttgcaatct 360 ||| ||||||||||| ||| || ||||||||||| Sbjct: 7603576 ctatgacctttctatagccgagtaactgttgcaatct 7603540 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 gaatcatgtatgtgaattcttgctgttaa 222 ||||||||||| |||||||| |||||||| Sbjct: 7603656 gaatcatgtatttgaattctggctgttaa 7603628
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0494D11 Length = 149198 Score = 109 bits (55), Expect = 1e-20 Identities = 104/118 (88%), Gaps = 3/118 (2%) Strand = Plus / Minus Query: 63 tacaattagaaagtatgcaactctaatcacttcacaaacccttaagtaataacatacaag 122 ||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||| Sbjct: 29002 tacaattagggagtatgcaactctaatcactccacacactgttaagtaataacatacaag 28943 Query: 123 aatacaacaatggtctgctga--aggtgttcagcgatgaatatt-tcccctccaggga 177 |||||||| |||| |||||| | |||||||||||||||||| ||||||||||||| Sbjct: 28942 tatacaacagtggtttgctgagcacctgttcagcgatgaatattgtcccctccaggga 28885 Score = 93.7 bits (47), Expect = 7e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| ||||||||||||||||||||||| ||||| || ||||| | |||||| | ||| Sbjct: 28452 cttgtaagcttcatggttatcaattattctggtagcaactgaaactgttgttataggttt 28393 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaagggcatacggatca 625 ||||||||||| | |||||| |||||||| ||||||||| ||| || |||||| Sbjct: 28392 ggggcttgtgattgtttggaagatacccatgctctttggaacggcgtatggatca 28338 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 437 cattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgccttcttt 496 ||||| ||||| |||||||||||||||| |||||||| | || || || ||||||||| Sbjct: 28645 cattaatctccagagacaaatttcttttgtgtgtagtatctatcttcgcttgccttcttt 28586 Query: 497 ttcaagtttcttttct 512 |||||||| ||||||| Sbjct: 28585 ttcaagttccttttct 28570 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/97 (84%), Gaps = 6/97 (6%) Strand = Plus / Minus Query: 268 ctgttaatttatttccttgagctgattccctttgccgaatggccatcaacttatcactga 327 ||||||||||| |||||||||||| ||||| || ||||||||||||| |||| ||||| Sbjct: 28829 ctgttaatttagttccttgagctggttccc-atgatgaatggccatcaa-ttataactga 28772 Query: 328 cta----ctttctatagctgagcaattgttgcaatct 360 ||| ||||||||||| ||| || ||||||||||| Sbjct: 28771 ctatgacctttctatagccgagtaactgttgcaatct 28735 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 gaatcatgtatgtgaattcttgctgttaa 222 ||||||||||| |||||||| |||||||| Sbjct: 28851 gaatcatgtatttgaattctggctgttaa 28823
>ref|NM_196259.1| Oryza sativa (japonica cultivar-group) putative phospholipid cytidylyltransferase (OSJNBa0094J09.9), mRNA Length = 2229 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 511 cttgtacgcttcatggttatcaattattcttgtagcgaccgaaacagatgttattgtttt 570 |||||| |||||||||||||| |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 2217 cttgtaagcttcatggttatcgattattctggtagccactgaaactgttgttataggttt 2158 Query: 571 ggggcttgtgactacttggaaaatacccatattctttggaa 611 || |||||||| | |||||| |||||||| ||||||||| Sbjct: 2157 ggtgcttgtgattgtttggaagatacccatgctctttggaa 2117
>gb|AY109975.1| Zea mays CL914_1 mRNA sequence Length = 1309 Score = 50.1 bits (25), Expect = 0.009 Identities = 89/112 (79%) Strand = Plus / Minus Query: 432 tgcagcattagtctccgtagacaaatttcttttgcgtgtagtacttgtcctcactcgcct 491 ||||||| |||||||| | || ||||||||||| ||||||||| ||| || || |||| Sbjct: 771 tgcagcactagtctccagaaacgaatttcttttgtgtgtagtaccggtcttcgctagcct 712 Query: 492 tctttttcaagtttcttttcttgtacgcttcatggttatcaattattcttgt 543 || || ||| || |||||||| |||||||| || |||| ||||||||| Sbjct: 711 tcnnnnncaggttcctcttcttgtaagcttcatgattgtcaactattcttgt 660
>emb|CR354611.10| Zebrafish DNA sequence from clone CH211-249B21 in linkage group 25, complete sequence Length = 81016 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 491 ttctttttcaagtttcttttctt 513 ||||||||||||||||||||||| Sbjct: 43259 ttctttttcaagtttcttttctt 43281
>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25, complete sequence Length = 253422 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 491 ttctttttcaagtttcttttctt 513 ||||||||||||||||||||||| Sbjct: 216203 ttctttttcaagtttcttttctt 216181
>gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, complete sequence Length = 192713 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 catgtatgtgaattcttgctgt 219 |||||||||||||||||||||| Sbjct: 167577 catgtatgtgaattcttgctgt 167598
>gb|BC022771.1| Mus musculus cDNA clone MGC:32180 IMAGE:5005221, complete cds Length = 1545 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 catgtatgtgaattcttgctgt 219 |||||||||||||||||||||| Sbjct: 1139 catgtatgtgaattcttgctgt 1160
>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence Length = 111845 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 catgtatgtgaattcttgctgt 219 |||||||||||||||||||||| Sbjct: 55327 catgtatgtgaattcttgctgt 55348
>ref|XM_630062.1| Dictyostelium discoideum hypothetical protein (DDB0230207), partial mRNA Length = 7095 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 cttctttttcaagtttctttt 510 ||||||||||||||||||||| Sbjct: 5914 cttctttttcaagtttctttt 5894
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 actcgccttctttttcaagtt 504 ||||||||||||||||||||| Sbjct: 1584848 actcgccttctttttcaagtt 1584828
>emb|CR376821.11| Zebrafish DNA sequence from clone CH211-67P11 in linkage group 25, complete sequence Length = 187216 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactacttg 588 ||||||||||||||||||||| Sbjct: 46640 tttggggcttgtgactacttg 46660
>emb|Z93929.1|HS272E8 Human DNA sequence from clone RP1-272E8 on chromosome Xp22.13-22.31 Contains a pseudogene similar to MDM2-Like P53-binding protein, the 5' end of the RAI2 gene for retinoic acid induced 2 and one CpG island, complete sequence Length = 117968 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 aaaactgtaagctcctttgca 435 ||||||||||||||||||||| Sbjct: 83712 aaaactgtaagctcctttgca 83732
>emb|BX682532.4| Human DNA sequence from clone WI2-801539E12 on chromosome 1 Contains part of the VPS13D gene for vacuolar protein sorting 13D (yeast), complete sequence Length = 41821 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 491 ttctttttcaagtttcttttcttgt 515 ||||||||||||||||| ||||||| Sbjct: 20501 ttctttttcaagtttctattcttgt 20477
>emb|BX005427.19| Zebrafish DNA sequence from clone DKEY-24F17 in linkage group 20 Contains the gene for a novel protein similar to elastase 2, the 3' end of the alas2 gene for aminolevulinate, delta-, synthetase 2, the gene for a novel elastase protein (zgc:637440), two novel genes and two CpG islands, complete sequence Length = 134851 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 cctcactcgccttctttttca 500 ||||||||||||||||||||| Sbjct: 59434 cctcactcgccttctttttca 59414
>emb|BX324207.7| Zebrafish DNA sequence from clone DKEY-11F7 in linkage group 16, complete sequence Length = 251037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttttggggcttgtgactactt 587 ||||||||||||||||||||| Sbjct: 245599 ttttggggcttgtgactactt 245579
>ref|XM_679804.1| PREDICTED: Danio rerio similar to LReO_3 (LOC556883), mRNA Length = 6624 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 cctcactcgccttctttttca 500 ||||||||||||||||||||| Sbjct: 6418 cctcactcgccttctttttca 6398
>ref|XM_691502.1| PREDICTED: Danio rerio similar to myosin, heavy polypeptide 9, non-muscle (LOC568188), mRNA Length = 3783 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 cctcactcgccttctttttca 500 ||||||||||||||||||||| Sbjct: 3577 cctcactcgccttctttttca 3557
>gb|AC090987.5| Homo sapiens chromosome 8, clone RP11-269I24, complete sequence Length = 153805 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 ctggcagtctgttaatttatt 280 ||||||||||||||||||||| Sbjct: 81043 ctggcagtctgttaatttatt 81063
>emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 in linkage group 8, complete sequence Length = 231254 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 cctcactcgccttctttttca 500 ||||||||||||||||||||| Sbjct: 168936 cctcactcgccttctttttca 168916
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 tttttcaagtttcttttcttg 514 ||||||||||||||||||||| Sbjct: 88879 tttttcaagtttcttttcttg 88899
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ttagaaagtatgcaactctaa 88 ||||||||||||||||||||| Sbjct: 5903802 ttagaaagtatgcaactctaa 5903782
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 tctgttaatttatttccttga 287 ||||||||||||||||||||| Sbjct: 1096791 tctgttaatttatttccttga 1096811
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ttagaaagtatgcaactctaa 88 ||||||||||||||||||||| Sbjct: 46250 ttagaaagtatgcaactctaa 46230
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ttagaaagtatgcaactctaa 88 ||||||||||||||||||||| Sbjct: 78476 ttagaaagtatgcaactctaa 78456
>emb|AL645466.12| Mouse DNA sequence from clone RP23-162P18 on chromosome X, complete sequence Length = 141324 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 caatctgttatagaataactc 375 ||||||||||||||||||||| Sbjct: 27252 caatctgttatagaataactc 27232
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aatcatgtatgtgaattctt 214 |||||||||||||||||||| Sbjct: 89537 aatcatgtatgtgaattctt 89518
>ref|XM_418750.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ22419 (LOC420651), mRNA Length = 2895 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 atatatactttaaactataa 57 |||||||||||||||||||| Sbjct: 2266 atatatactttaaactataa 2247
>gb|AC146279.2| Pan troglodytes BAC clone RP43-29J18 from 7, complete sequence Length = 188896 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tttttcaagtttcttttctt 513 |||||||||||||||||||| Sbjct: 85828 tttttcaagtttcttttctt 85809
>emb|CR387920.13| Zebrafish DNA sequence from clone DKEY-82J4 in linkage group 1, complete sequence Length = 70948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 43906 tttggggcttgtgactactt 43887
>emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in linkage group 15, complete sequence Length = 207732 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 93410 tttggggcttgtgactactt 93391
>emb|CR524826.13| Zebrafish DNA sequence from clone CH211-227A6 in linkage group 16, complete sequence Length = 136920 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 64203 tttggggcttgtgactactt 64222 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 52013 tttggggcttgtgactactt 51994
>gb|AC147408.1| Pan troglodytes BAC clone RP43-81O16 from 7, complete sequence Length = 151748 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tttttcaagtttcttttctt 513 |||||||||||||||||||| Sbjct: 146646 tttttcaagtttcttttctt 146627
>emb|BX927327.14| Zebrafish DNA sequence from clone CH211-11C15 in linkage group 14, complete sequence Length = 182779 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 156479 tttggggcttgtgactactt 156498
>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 aaagggcaacagtagaagactggc 264 |||||| ||||||||||||||||| Sbjct: 151076 aaagggaaacagtagaagactggc 151099
>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14, complete sequence Length = 189098 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 163786 tttggggcttgtgactactt 163805
>gb|AC004535.1| Homo sapiens PAC clone RP4-698G21 from 7, complete sequence Length = 109469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tttttcaagtttcttttctt 513 |||||||||||||||||||| Sbjct: 53219 tttttcaagtttcttttctt 53200
>gb|AC004901.1| Homo sapiens PAC clone RP5-817I18 from 7, complete sequence Length = 80288 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ttctttttcaagtttctttt 510 |||||||||||||||||||| Sbjct: 55176 ttctttttcaagtttctttt 55195
>emb|CR450828.5| Zebrafish DNA sequence from clone CH211-199A5 in linkage group 2, complete sequence Length = 90546 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 86531 tttggggcttgtgactactt 86550
>emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in linkage group 14, complete sequence Length = 260668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 204346 tttggggcttgtgactactt 204327
>emb|BX927285.6| Zebrafish DNA sequence from clone CH211-65M8, complete sequence Length = 188393 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 37066 tttggggcttgtgactactt 37085
>emb|AL390295.10| Human DNA sequence from clone RP11-254D22 on chromosome 13, complete sequence Length = 98339 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tctttttcaagtttcttttc 511 |||||||||||||||||||| Sbjct: 81249 tctttttcaagtttcttttc 81230
>emb|AL512656.16| Human DNA sequence from clone RP11-537A6 on chromosome 10 Contains the 3' end of a novel gene (KIAA0974) (FLJ21536), the DNAJC9 gene for DnaJ (Hsp40) homolog subfamily C member 9, three novel genes, the MRPS16 gene for mitochondrial ribosomal protein S16, the gene for tetratricopeptide repeat-containing protein (LOC118491) (FLJ25765), the 3' end of the ANXA7 gene for annexin A7, two novel genes and three CpG islands, complete sequence Length = 162901 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 agcagtatatatactttaaa 51 |||||||||||||||||||| Sbjct: 131451 agcagtatatatactttaaa 131470
>emb|AL031676.3|HS753D4 Human DNA sequence from clone RP4-753D4 on chromosome 20q12 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T and a novel gene, complete sequence Length = 126635 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tatcactgactactttctat 338 |||||||||||||||||||| Sbjct: 97894 tatcactgactactttctat 97875
>emb|AL031003.1|HS422G23 Human DNA sequence from clone RP3-422G23 on chromosome 6q24 Contains the gene for KIAA1244 protein, a macrophage myristoylated alanine-rich C kinase substrate (MACMARCKS) pseudogene, a pseudogene similar to Mus musculus upregulated during skeletal muscle growth 5 (Usmg5), the gene for chromosome 6 open reading frame 34 (C6orf34) (SOUL) and a CpG island, complete sequence Length = 159344 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 ccttctttttcaagtttcttttct 512 ||||||||||||||||| |||||| Sbjct: 106801 ccttctttttcaagtttgttttct 106824
>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1, complete sequence Length = 178445 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 21415 tttggggcttgtgactactt 21396
>gb|AY847351.1| Lymphocytic choriomeningitis virus Armstrong 53b segment RNA L, complete sequence Length = 7228 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tctttttcaagtttcttttc 511 |||||||||||||||||||| Sbjct: 3764 tctttttcaagtttcttttc 3745
>emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in linkage group 5, complete sequence Length = 205761 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 181968 tttggggcttgtgactactt 181987
>emb|BX088646.21| Zebrafish DNA sequence from clone DKEY-42F19 in linkage group 14, complete sequence Length = 235682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 81831 tttggggcttgtgactactt 81812
>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21, complete sequence Length = 180154 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 79923 tttggggcttgtgactactt 79942
>emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 in linkage group 21, complete sequence Length = 202152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 138635 tttggggcttgtgactactt 138654
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gccttctttttcaagtttcttttc 511 ||||| |||||||||||||||||| Sbjct: 6595 gccttttttttcaagtttcttttc 6618
>emb|CR788244.9| Zebrafish DNA sequence from clone DKEY-254A16 in linkage group 18, complete sequence Length = 208154 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 154874 tttggggcttgtgactactt 154855
>emb|BX322792.11| Zebrafish DNA sequence from clone CH211-261I17, complete sequence Length = 174226 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 35303 tttggggcttgtgactactt 35322
>emb|AL627170.5| Zebrafish DNA sequence from clone XX-KT73 Contains a novel gene, a reverse transcriptase pseudogene and a novel gene similar to SLC17A6 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6), complete sequence Length = 87485 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 50151 tttggggcttgtgactactt 50170
>emb|AL627163.3| Zebrafish DNA sequence from clone XX-KT90 Contains part of a novel gene and a novel gene similar to SLC17A6 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6), complete sequence Length = 93831 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 51379 tttggggcttgtgactactt 51360
>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete sequence Length = 263757 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 206955 tttggggcttgtgactactt 206936
>emb|AL772332.6| Zebrafish DNA sequence from clone CH211-150A22 in linkage group 1 Contains part of a gene similar to human PET112 for PET112-like protein from yeast, two novel genes and seven CpG islands, complete sequence Length = 175762 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 43223 tttggggcttgtgactactt 43204
>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete sequence Length = 197683 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 115653 tttggggcttgtgactactt 115634
>emb|BX546493.8| Zebrafish DNA sequence from clone RP71-34B19, complete sequence Length = 173065 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 59084 tttggggcttgtgactactt 59065
>emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 in linkage group 10, complete sequence Length = 210640 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 168375 tttggggcttgtgactactt 168356
>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete sequence Length = 181568 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 52820 tttggggcttgtgactactt 52801
>emb|BX572103.8| Zebrafish DNA sequence from clone CH211-215L16 in linkage group 11, complete sequence Length = 204701 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 141595 tttggggcttgtgactactt 141614
>emb|BX571691.13| Zebrafish DNA sequence from clone CH211-142G20 in linkage group 7, complete sequence Length = 79440 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 57827 tttggggcttgtgactactt 57846
>gb|DQ361066.1| Lymphocytic choriomeningitis virus clone 13 segment L, complete sequence Length = 7229 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tctttttcaagtttcttttc 511 |||||||||||||||||||| Sbjct: 3765 tctttttcaagtttcttttc 3746
>emb|BX510922.8| Zebrafish DNA sequence from clone DKEY-50I6 in linkage group 21, complete sequence Length = 87532 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 60729 tttggggcttgtgactactt 60710
>emb|BX537356.4| Zebrafish DNA sequence from clone DKEY-46P12 in linkage group 7, complete sequence Length = 105480 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 23583 tttggggcttgtgactactt 23564
>emb|BX663501.9| Zebrafish DNA sequence from clone DKEY-117G20 in linkage group 2, complete sequence Length = 88647 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 17870 tttggggcttgtgactactt 17889
>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence Length = 173135 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gaaacagatgttattgtttt 570 |||||||||||||||||||| Sbjct: 154739 gaaacagatgttattgtttt 154758
>emb|BX908749.6| Zebrafish DNA sequence from clone DKEY-247F18 in linkage group 18, complete sequence Length = 186014 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 156022 tttggggcttgtgactactt 156003
>emb|BX323458.7| Zebrafish DNA sequence from clone DKEYP-69B9 in linkage group 16, complete sequence Length = 194378 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 43918 tttggggcttgtgactactt 43899
>emb|BX323888.8| Zebrafish DNA sequence from clone CH211-134G21 in linkage group 3, complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 133106 tttggggcttgtgactactt 133125 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 112580 tttggggcttgtgactactt 112599
>emb|BX572641.10| Zebrafish DNA sequence from clone CH211-213N22 in linkage group 12, complete sequence Length = 183309 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 162694 tttggggcttgtgactactt 162675
>emb|BX005085.11| Zebrafish DNA sequence from clone CH211-225F23 in linkage group 3, complete sequence Length = 172000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 109322 tttggggcttgtgactactt 109303
>emb|BX088529.6| Zebrafish DNA sequence from clone CH211-286H12, complete sequence Length = 178667 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 133181 tttggggcttgtgactactt 133200
>emb|AL929493.20| Zebrafish DNA sequence from clone CH211-157D2, complete sequence Length = 180578 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 125111 tttggggcttgtgactactt 125092
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 177014 tttggggcttgtgactactt 176995
>gb|AC092138.4| Homo sapiens chromosome 16 clone RP11-351A20, complete sequence Length = 189505 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 aaacagatgttattgttttg 571 |||||||||||||||||||| Sbjct: 54206 aaacagatgttattgttttg 54225
>emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in linkage group 25, complete sequence Length = 142728 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ttctttttcaagtttctttt 510 |||||||||||||||||||| Sbjct: 83171 ttctttttcaagtttctttt 83190
>emb|AL928788.3| Mouse DNA sequence from clone RP24-294K11 on chromosome 2, complete sequence Length = 163547 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tacaattagaaagtatgcaa 82 |||||||||||||||||||| Sbjct: 15071 tacaattagaaagtatgcaa 15090
>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence Length = 158673 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 15253 tttggggcttgtgactactt 15234
>emb|BX072571.9| Zebrafish DNA sequence from clone DKEY-238F24, complete sequence Length = 140346 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 97135 tttggggcttgtgactactt 97116
>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence Length = 176196 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 66237 tttggggcttgtgactactt 66218
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence Length = 241975 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 129670 tttggggcttgtgactactt 129651
>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence Length = 168383 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 100054 tttggggcttgtgactactt 100073
>gb|AC107641.11| Mus musculus chromosome 7, clone RP23-54G8, complete sequence Length = 164725 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatatatactttaaactata 56 |||||||||||||||||||| Sbjct: 56577 tatatatactttaaactata 56596
>emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 in linkage group 14, complete sequence Length = 167962 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 69098 tttggggcttgtgactactt 69117
>emb|BX842702.13| Zebrafish DNA sequence from clone DKEY-226D17 in linkage group 20, complete sequence Length = 211769 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 187553 tttggggcttgtgactactt 187534
>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19, complete sequence Length = 179116 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 11176 tttggggcttgtgactactt 11195
>emb|BX571821.11| Zebrafish DNA sequence from clone DKEY-286J7 in linkage group 20, complete sequence Length = 91760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 82285 tttggggcttgtgactactt 82266
>emb|BX927137.9| Zebrafish DNA sequence from clone DKEY-30L13 in linkage group 18, complete sequence Length = 48500 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 29004 tttggggcttgtgactactt 28985
>emb|BX901902.8| Zebrafish DNA sequence from clone CH211-191N16 in linkage group 4, complete sequence Length = 32946 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 19375 tttggggcttgtgactactt 19394
>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3, complete sequence Length = 160599 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 6877 tttggggcttgtgactactt 6858
>emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 in linkage group 20, complete sequence Length = 175099 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 119454 tttggggcttgtgactactt 119435
>emb|BX005470.6| Zebrafish DNA sequence from clone CH211-122K23 in linkage group 18, complete sequence Length = 172552 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 48153 tttggggcttgtgactactt 48134
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 489 ccttctttttcaagtttcttttcttgta 516 ||||||||||||| ||||||||| |||| Sbjct: 296446 ccttctttttcaattttcttttcatgta 296473
>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9, complete sequence Length = 201771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 97919 tttggggcttgtgactactt 97900
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 46394 tttggggcttgtgactactt 46413
>emb|BX322597.3| Zebrafish DNA sequence from clone RP71-7L19 in linkage group 4, complete sequence Length = 173945 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 150289 tttggggcttgtgactactt 150270
>gb|AC174082.3| Mus musculus BAC clone RP23-395H10 from chromosome 13, complete sequence Length = 208596 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aacatacaagaatacaacaa 132 |||||||||||||||||||| Sbjct: 65261 aacatacaagaatacaacaa 65242
>emb|AL954671.8| Zebrafish DNA sequence from clone DKEY-180B4 in linkage group 1, complete sequence Length = 142357 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 80846 tttggggcttgtgactactt 80827
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 133088 tttggggcttgtgactactt 133107
>emb|AL928685.7| Zebrafish DNA sequence from clone CH211-139G14, complete sequence Length = 176893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 148282 tttggggcttgtgactactt 148263
>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete sequence Length = 228494 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 ccttctttttcaagtttcttttct 512 ||||||||||| |||||||||||| Sbjct: 55476 ccttctttttccagtttcttttct 55453
>gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromosome unknown, complete sequence Length = 180657 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 ccttctttttcaagtttcttttct 512 ||||||||||| |||||||||||| Sbjct: 11892 ccttctttttccagtttcttttct 11915
>emb|CT009705.9| Zebrafish DNA sequence from clone DKEYP-81C5 in linkage group 14, complete sequence Length = 200808 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 116183 tttggggcttgtgactactt 116202
>gb|AC171638.2| Rhesus Macaque BAC CH250-504D18 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 160646 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acaacaatggtctgctgaag 145 |||||||||||||||||||| Sbjct: 79673 acaacaatggtctgctgaag 79654
>emb|CR391944.10| Zebrafish DNA sequence from clone CH211-95K19 in linkage group 3, complete sequence Length = 172806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 127895 tttggggcttgtgactactt 127876
>emb|AL935284.13| Zebrafish DNA sequence from clone CH211-271N3, complete sequence Length = 171556 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 66373 tttggggcttgtgactactt 66392
>emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on chromosome 2, complete sequence Length = 186386 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acttagtacaattagaaagt 76 |||||||||||||||||||| Sbjct: 174730 acttagtacaattagaaagt 174711
>emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in linkage group 14, complete sequence Length = 196530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 88311 tttggggcttgtgactactt 88330
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC, Nv-ZicD, Nv-ZicE, complete cds Length = 177971 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ttctttttcaagtttcttttcttg 514 |||||||||||||| ||||||||| Sbjct: 16042 ttctttttcaagttgcttttcttg 16065
>emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, complete sequence Length = 197137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tttggggcttgtgactactt 587 |||||||||||||||||||| Sbjct: 193227 tttggggcttgtgactactt 193246
>gb|J04331.1|LCVLPY Lymphocytic choriomeningitis virus putative RNA polymerase L gene, complete cds Length = 6680 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tctttttcaagtttcttttc 511 |||||||||||||||||||| Sbjct: 3465 tctttttcaagtttcttttc 3484
>emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on chromosome X, complete sequence Length = 201223 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ttagtctccgtagacaaatt 458 |||||||||||||||||||| Sbjct: 53443 ttagtctccgtagacaaatt 53462
>gb|AC155076.17| Mus musculus chromosome 1, clone RP24-257G18, complete sequence Length = 224817 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 492 tctttttcaagtttcttttcttgt 515 ||||||||| |||||||||||||| Sbjct: 101776 tctttttcatgtttcttttcttgt 101753 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,877,303 Number of Sequences: 3902068 Number of extensions: 6877303 Number of successful extensions: 140485 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139920 Number of HSP's gapped (non-prelim): 557 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
