| Clone Name | rbags38c11 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 91.3 bits (225), Expect = 2e-18 Identities = 53/103 (51%), Positives = 65/103 (63%) Frame = -3 Query: 607 VSERKIRFASNYPPXYLFEKIESNVINMGFQVQKNNGKLKVIQERKGPTNPRGHGSLLIS 428 VSER+IRF SN L EKIE+ V MGF VQK + KL+V QE + N +G L ++ Sbjct: 341 VSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEER---NQKGQVGLSVT 397 Query: 427 AEVFEINESLYVVELKRSCGDCSLYRQLCATLSDDLGICKSQQ 299 AEVFEI SL VVEL++S GD LYRQL L D+G +Q Sbjct: 398 AEVFEIKPSLNVVELRKSYGDSCLYRQLYERLLKDVGTSSPEQ 440
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 60.5 bits (145), Expect = 4e-09 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = -3 Query: 601 ERKIRFASNYPPXYLFEKIESNVINMGFQVQKNNGKLKVIQERKGPTNPRGHGSLLISAE 422 +R+ RF S PP + KIE +GF +QK N K+++ + G G+L ++ E Sbjct: 343 KRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRK-----GNLNVATE 397 Query: 421 VFEINESLYVVELKRSCGDCSLYRQLCATLSDDL 320 VF++ SL+VVELK++ GD +++ TLS L Sbjct: 398 VFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQL 431
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/86 (26%), Positives = 45/86 (52%) Frame = -3 Query: 601 ERKIRFASNYPPXYLFEKIESNVINMGFQVQKNNGKLKVIQERKGPTNPRGHGSLLISAE 422 + ++RF SN + EK+ ++ +V+K + +V + + ++ AE Sbjct: 328 KEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAE---------ATVVEAE 378 Query: 421 VFEINESLYVVELKRSCGDCSLYRQL 344 VFEI S ++V LK+S GD + Y+++ Sbjct: 379 VFEIAPSYHMVVLKKSGGDTAEYKRV 404
>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)| Length = 1738 Score = 34.3 bits (77), Expect = 0.29 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = -3 Query: 547 IESNVINMGFQVQKNNGKLKVIQERKGPTNPRGHGSLLISAEVFEINES 401 I++ ++ + F + KN+ K I E+KGPT GS+LI ++ +I ES Sbjct: 1440 IKNKLLFINFTINKNSSK--TINEKKGPTGREDLGSVLILSQKKDIEES 1486
>LEPR_MOUSE (P48356) Leptin receptor precursor (LEP-R) (OB receptor) (OB-R)| (B219) (CD295 antigen) Length = 1162 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +3 Query: 267 SSCLMESFFXSCWLLHIPKSSESVAHSCLYREQSPH-DLFSSTT*RDSLISNTSAEINND 443 S ++E+ F S + ++P+ S++V H C EQ + + T +L S A + Sbjct: 64 SEAIVEAKFNSSGI-YVPELSKTVFHCCFGNEQGQNCSALTDNTEGKTLASVVKASVFRQ 122 Query: 444 PCPLGFVGPLRSWITFSLPLFFCTWKPI 527 LG + W+ L LF C +P+ Sbjct: 123 ---LGVNWDIECWMKGDLTLFICHMEPL 147
>SC5A7_DROME (Q9VE46) High-affinity choline transporter 1| Length = 614 Score = 30.0 bits (66), Expect = 5.5 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 17 PKVKRXNYDEPSKRNLFFPWMVNIWYLNGVTCISTSWFYK 136 P +K YDE +K +F P+ L+ VT IS SW+ K Sbjct: 447 PLIKYPGYDEETKEQMF-PFRTMAMLLSLVTLISVSWWTK 485
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 351 LYREQSPHDLFSSTT*RDSLISNTSAEINNDP 446 +Y E+ P D F+ D LI+NTSA+ +P Sbjct: 597 IYLERGPKDCFTKPAEADDLINNTSAKEEENP 628
>GTHB2_CLUPA (Q9YGH2) Gonadotropin beta-2 subunit precursor (Gonadotropin| beta-II chain) (GTH-II-beta) Length = 149 Score = 29.3 bits (64), Expect = 9.4 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -3 Query: 397 YVVELKRSCGDCSLYRQLCATLSDDLGICKSQQLXKKDSMRQELYRY 257 Y V L C CS+ C S + C SQ+L +S + LY Y Sbjct: 103 YPVALSCECSLCSMDTSDCTIESVEPDFCMSQRLPVYESQKPSLYDY 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,507,618 Number of Sequences: 219361 Number of extensions: 1812108 Number of successful extensions: 4445 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4443 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)