ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466222.1| Oryza sativa (japonica cultivar-group), mRNA 375 e-100
2dbj|AK064926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
4dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
5gb|AC147974.2| Pan troglodytes BAC clone RP43-67J16 from 7, comp... 44 0.58
6gb|AC002381.1| Homo sapiens BAC clone CTB-20D2 from 7, complete ... 44 0.58
7gb|AC090625.5| Homo sapiens chromosome 11, clone RP4-683L5, comp... 44 0.58
8gb|AF002993.1|HSAF002993 Homo sapiens cosmid from 7q22, complete... 42 2.3
9gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome... 42 2.3
10emb|AL096723.1|HSM800627 Homo sapiens mRNA; cDNA DKFZp564H2023 (... 42 2.3
11emb|CR861036.1| Pongo pygmaeus mRNA; cDNA DKFZp470E1612 (from cl... 42 2.3
12gb|AC012588.14| Homo sapiens chromosome 18, clone RP11-17A19, co... 42 2.3
13gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete ... 42 2.3
14gb|AF248955.1| Homo sapiens arsenite-resistant protein ASR2 (ASR... 42 2.3
15gb|AC090337.5| Homo sapiens chromosome 18, clone RP11-674P19, co... 42 2.3
16gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, comple... 42 2.3
17gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) ... 42 2.3
18gb|AC023510.16|AC023510 Homo sapiens 12 BAC RP11-713N11 (Roswell... 42 2.3
19gb|BC109117.1| Homo sapiens ARS2 protein, mRNA (cDNA clone MGC:1... 42 2.3
20gb|BC069249.1| Homo sapiens ARS2 protein, mRNA (cDNA clone IMAGE... 42 2.3
21gb|BC109116.1| Homo sapiens cDNA clone IMAGE:40035608 42 2.3
22ref|NM_182800.2| Homo sapiens ARS2 protein (ARS2), transcript va... 42 2.3
23ref|NM_015908.4| Homo sapiens ARS2 protein (ARS2), transcript va... 42 2.3
24ref|NM_001001991.1| Homo sapiens regeneration associated muscle ... 40 9.1
25ref|NM_015430.2| Homo sapiens regeneration associated muscle pro... 40 9.1
26gb|BC038457.1| Homo sapiens regeneration associated muscle prote... 40 9.1
27gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 9.1
28gb|AY358346.1| Homo sapiens clone DNA58723 ELGC699 (UNQ699) mRNA... 40 9.1
29emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in... 40 9.1
30gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's H... 40 9.1
31gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, com... 40 9.1
32emb|AL354984.17| Human DNA sequence from clone RP13-379L11 on ch... 40 9.1
33emb|BX640676.1|HSM806734 Homo sapiens mRNA; cDNA DKFZp686N24154 ... 40 9.1
34emb|AL832391.1|HSM803699 Homo sapiens mRNA; cDNA DKFZp667H2312 (... 40 9.1
35emb|AL050214.1|HSM800511 Homo sapiens mRNA; cDNA DKFZp586H2123 (... 40 9.1
36emb|CR857928.1| Pongo pygmaeus mRNA; cDNA DKFZp468N1810 (from cl... 40 9.1
37ref|NM_165193.1| Drosophila melanogaster Ugt36Bc CG17932-RB, tra... 40 9.1
38ref|NM_144370.2| Drosophila melanogaster Ugt36Bc CG17932-RA, tra... 40 9.1
39gb|AC012470.16| Homo sapiens chromosome 10 clone RP11-506P9, com... 40 9.1
40dbj|AK136904.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 9.1
41gb|AY070939.1| Drosophila melanogaster RE03785 full length cDNA 40 9.1
42gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36... 40 9.1
43gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Canc... 40 9.1
44gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Canc... 40 9.1
45gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126... 40 9.1
46gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, r... 40 9.1
47gb|AC025272.6|AC025272 Homo sapiens chromosome 15 clone RP11-548... 40 9.1
48emb|BX855594.2| Mouse DNA sequence from clone RP24-322M2 on chro... 40 9.1
49emb|AL831749.9| Mouse DNA sequence from clone RP23-99A5 on chrom... 40 9.1
50emb|AL808104.14| Mouse DNA sequence from clone RP23-30M20 on chr... 40 9.1
51gb|AC145042.3| Macropus eugenii clone ME_KBa-289E24, complete se... 40 9.1
52emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 9.1
53gb|BC089434.1| Homo sapiens regeneration associated muscle prote... 40 9.1
54gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61... 40 9.1
55gb|AC005872.2|AC005872 Homo sapiens chromosome 10 clone CIT987SK... 40 9.1
56ref|NM_009218.2| Mus musculus somatostatin receptor 3 (Sstr3), mRNA 40 9.1
57gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cance... 40 9.1
58emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on ch... 40 9.1
59emb|AL928640.3| Mouse DNA sequence from clone RP23-314C7 on chro... 40 9.1
60emb|AL671719.6| Mouse DNA sequence from clone RP23-287N11 on chr... 40 9.1 
>ref|XM_466222.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2333

 Score =  375 bits (189), Expect = e-100
 Identities = 375/437 (85%)
 Strand = Plus / Minus

                                                                        
Query: 231  ctttgttttgtcataaacctcaatatatctcttgggaacaccatgatggtcaacgaggtg 290
            |||||||||||||  |||||||||| | ||||| |||||||| | ||| ||||| |||||
Sbjct: 1907 ctttgttttgtcaagaacctcaataaacctcttcggaacaccgtaatgatcaacaaggtg 1848

                                                                        
Query: 291  ctttgcaaggttttcaatgactccgccttgaatcaagacctcatgttgcccctttttacc 350
            |||||||||||  || |||||||| ||||||| ||||||||| |||||||| || |||||
Sbjct: 1847 ctttgcaaggtcatcgatgactccaccttgaaccaagacctcgtgttgccctttcttacc 1788

                                                                        
Query: 351  gggaagctcagctgtggtggtgctgcaagcaaatttcttttgtagttcagaagccaagga 410
             |||||||||||||||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct: 1787 tggaagctcagctgtggtggtgctgcaagcaaacttcttctgcagctcagaagctaacga 1728

                                                                        
Query: 411  gtcggcatccagcaaaaagcattccaatccagagactcgggtcatcttcttgttcccttg 470
            ||| | |||||  || ||||||||||||||||| |  ||||||||||||||||| |||||
Sbjct: 1727 gtcaggatccattaagaagcattccaatccagatagccgggtcatcttcttgtttccttg 1668

                                                                        
Query: 471  tcttctttctgtcatgatttgaacagttcgtatggcacccttgcgaatgaccacctcatt 530
             ||||| ||||||||||| ||||  ||||||||||| |||||||||||||||||||| ||
Sbjct: 1667 ccttctctctgtcatgatctgaatggttcgtatggcgcccttgcgaatgaccacctcgtt 1608

                                                                        
Query: 531  tcctctagctactctatgatgaatttgcatacggttaataaatgttgaccctaaatcctt 590
             ||||| ||||||||||| ||||| ||||| ||||| | |||||||||||| |  ||| |
Sbjct: 1607 ccctcttgctactctatggtgaatctgcattcggtttaaaaatgttgaccccaggtccct 1548

                                                                        
Query: 591  cttgtgtatctcacttgggtatgctgaacccttcttgacagctcctttgtacagagcatc 650
            |||||| |||||  ||||||||||||||||||| ||||  ||||||||||| ||||| ||
Sbjct: 1547 cttgtggatctcggttgggtatgctgaaccctttttgatggctcctttgtagagagcgtc 1488

                             
Query: 651  acataatgtagcatcca 667
             ||||||| | ||||||
Sbjct: 1487 gcataatgcaacatcca 1471
to top
>dbj|AK064926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N18, full
            insert sequence
          Length = 2333

 Score =  367 bits (185), Expect = 3e-98
 Identities = 374/437 (85%)
 Strand = Plus / Minus

                                                                        
Query: 231  ctttgttttgtcataaacctcaatatatctcttgggaacaccatgatggtcaacgaggtg 290
            |||||||||||||  |||||||||| | ||||| |||||||| | ||| ||||| |||||
Sbjct: 1907 ctttgttttgtcaagaacctcaataaacctcttcggaacaccgtaatgatcaacaaggtg 1848

                                                                        
Query: 291  ctttgcaaggttttcaatgactccgccttgaatcaagacctcatgttgcccctttttacc 350
            |||||||||||  || |||||||| ||||||| ||||||||| |||||||| || |||||
Sbjct: 1847 ctttgcaaggtcatcgatgactccaccttgaaccaagacctcgtgttgccctttcttacc 1788

                                                                        
Query: 351  gggaagctcagctgtggtggtgctgcaagcaaatttcttttgtagttcagaagccaagga 410
             |||||||||||||||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct: 1787 tggaagctcagctgtggtggtgctgcaagcaaacttcttctgcagctcagaagctaacga 1728

                                                                        
Query: 411  gtcggcatccagcaaaaagcattccaatccagagactcgggtcatcttcttgttcccttg 470
            ||| | |||||  || ||||||||||||||||| |  ||||||||||||||||| |||||
Sbjct: 1727 gtcaggatccattaagaagcattccaatccagatagccgggtcatcttcttgtttccttg 1668

                                                                        
Query: 471  tcttctttctgtcatgatttgaacagttcgtatggcacccttgcgaatgaccacctcatt 530
             ||||| ||||||||||| ||||  ||||||||||| ||||||||||||||||||||  |
Sbjct: 1667 ccttctctctgtcatgatctgaatggttcgtatggcgcccttgcgaatgaccacctcgct 1608

                                                                        
Query: 531  tcctctagctactctatgatgaatttgcatacggttaataaatgttgaccctaaatcctt 590
             ||||| ||||||||||| ||||| ||||| ||||| | |||||||||||| |  ||| |
Sbjct: 1607 ccctcttgctactctatggtgaatctgcattcggtttaaaaatgttgaccccaggtccct 1548

                                                                        
Query: 591  cttgtgtatctcacttgggtatgctgaacccttcttgacagctcctttgtacagagcatc 650
            |||||| |||||  ||||||||||||||||||| ||||  ||||||||||| ||||| ||
Sbjct: 1547 cttgtggatctcggttgggtatgctgaaccctttttgatggctcctttgtagagagcgtc 1488

                             
Query: 651  acataatgtagcatcca 667
             ||||||| | ||||||
Sbjct: 1487 gcataatgcaacatcca 1471
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  278 bits (140), Expect = 2e-71
 Identities = 272/316 (86%)
 Strand = Plus / Plus

                                                                            
Query: 352      ggaagctcagctgtggtggtgctgcaagcaaatttcttttgtagttcagaagccaaggag 411
                |||||||||||||||||||||||||||||||| ||||| || || |||||||| || |||
Sbjct: 21135972 ggaagctcagctgtggtggtgctgcaagcaaacttcttctgcagctcagaagctaacgag 21136031

                                                                            
Query: 412      tcggcatccagcaaaaagcattccaatccagagactcgggtcatcttcttgttcccttgt 471
                || | |||||  || ||||||||||||||||| |  ||||||||||||||||| ||||| 
Sbjct: 21136032 tcaggatccattaagaagcattccaatccagatagccgggtcatcttcttgtttccttgc 21136091

                                                                            
Query: 472      cttctttctgtcatgatttgaacagttcgtatggcacccttgcgaatgaccacctcattt 531
                ||||| ||||||||||| ||||  ||||||||||| |||||||||||||||||||| || 
Sbjct: 21136092 cttctctctgtcatgatctgaatggttcgtatggcgcccttgcgaatgaccacctcgttc 21136151

                                                                            
Query: 532      cctctagctactctatgatgaatttgcatacggttaataaatgttgaccctaaatccttc 591
                ||||| ||||||||||| ||||| ||||| ||||| | |||||||||||| |  ||| ||
Sbjct: 21136152 cctcttgctactctatggtgaatctgcattcggtttaaaaatgttgaccccaggtccctc 21136211

                                                                            
Query: 592      ttgtgtatctcacttgggtatgctgaacccttcttgacagctcctttgtacagagcatca 651
                ||||| |||||  ||||||||||||||||||| ||||  ||||||||||| ||||| || 
Sbjct: 21136212 ttgtggatctcggttgggtatgctgaaccctttttgatggctcctttgtagagagcgtcg 21136271

                                
Query: 652      cataatgtagcatcca 667
                ||||||| | ||||||
Sbjct: 21136272 cataatgcaacatcca 21136287



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                            
Query: 231      ctttgttttgtcataaacctcaatatatctcttgggaacaccatgatggtcaacgaggtg 290
                |||||||||||||  |||||||||| | ||||| |||||||| | ||| ||||| |||||
Sbjct: 21135749 ctttgttttgtcaagaacctcaataaacctcttcggaacaccgtaatgatcaacaaggtg 21135808

                                                                            
Query: 291      ctttgcaaggttttcaatgactccgccttgaatcaagacctcatgttgcccctttttacc 350
                |||||||||||  || |||||||| ||||||| ||||||||| |||||||| || |||||
Sbjct: 21135809 ctttgcaaggtcatcgatgactccaccttgaaccaagacctcgtgttgccctttcttacc 21135868

                     
Query: 351      gggaa 355
                 ||||
Sbjct: 21135869 tggaa 21135873
to top
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score =  278 bits (140), Expect = 2e-71
 Identities = 272/316 (86%)
 Strand = Plus / Plus

                                                                         
Query: 352   ggaagctcagctgtggtggtgctgcaagcaaatttcttttgtagttcagaagccaaggag 411
             |||||||||||||||||||||||||||||||| ||||| || || |||||||| || |||
Sbjct: 42688 ggaagctcagctgtggtggtgctgcaagcaaacttcttctgcagctcagaagctaacgag 42747

                                                                         
Query: 412   tcggcatccagcaaaaagcattccaatccagagactcgggtcatcttcttgttcccttgt 471
             || | |||||  || ||||||||||||||||| |  ||||||||||||||||| ||||| 
Sbjct: 42748 tcaggatccattaagaagcattccaatccagatagccgggtcatcttcttgtttccttgc 42807

                                                                         
Query: 472   cttctttctgtcatgatttgaacagttcgtatggcacccttgcgaatgaccacctcattt 531
             ||||| ||||||||||| ||||  ||||||||||| |||||||||||||||||||| || 
Sbjct: 42808 cttctctctgtcatgatctgaatggttcgtatggcgcccttgcgaatgaccacctcgttc 42867

                                                                         
Query: 532   cctctagctactctatgatgaatttgcatacggttaataaatgttgaccctaaatccttc 591
             ||||| ||||||||||| ||||| ||||| ||||| | |||||||||||| |  ||| ||
Sbjct: 42868 cctcttgctactctatggtgaatctgcattcggtttaaaaatgttgaccccaggtccctc 42927

                                                                         
Query: 592   ttgtgtatctcacttgggtatgctgaacccttcttgacagctcctttgtacagagcatca 651
             ||||| |||||  ||||||||||||||||||| ||||  ||||||||||| ||||| || 
Sbjct: 42928 ttgtggatctcggttgggtatgctgaaccctttttgatggctcctttgtagagagcgtcg 42987

                             
Query: 652   cataatgtagcatcca 667
             ||||||| | ||||||
Sbjct: 42988 cataatgcaacatcca 43003



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                         
Query: 231   ctttgttttgtcataaacctcaatatatctcttgggaacaccatgatggtcaacgaggtg 290
             |||||||||||||  |||||||||| | ||||| |||||||| | ||| ||||| |||||
Sbjct: 42465 ctttgttttgtcaagaacctcaataaacctcttcggaacaccgtaatgatcaacaaggtg 42524

                                                                         
Query: 291   ctttgcaaggttttcaatgactccgccttgaatcaagacctcatgttgcccctttttacc 350
             |||||||||||  || |||||||| ||||||| ||||||||| |||||||| || |||||
Sbjct: 42525 ctttgcaaggtcatcgatgactccaccttgaaccaagacctcgtgttgccctttcttacc 42584

                  
Query: 351   gggaa 355
              ||||
Sbjct: 42585 tggaa 42589
to top
>gb|AC147974.2| Pan troglodytes BAC clone RP43-67J16 from 7, complete sequence
          Length = 170261

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 291   ctttgcaaggttttcaatgact 312
             ||||||||||||||||||||||
Sbjct: 27172 ctttgcaaggttttcaatgact 27151
to top
>gb|AC002381.1| Homo sapiens BAC clone CTB-20D2 from 7, complete sequence
          Length = 172533

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 291    ctttgcaaggttttcaatgact 312
              ||||||||||||||||||||||
Sbjct: 167088 ctttgcaaggttttcaatgact 167067
to top
>gb|AC090625.5| Homo sapiens chromosome 11, clone RP4-683L5, complete sequence
          Length = 142522

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 378    agcaaatttcttttgtagttcagaagccaa 407
              |||| |||| ||||||||||||||||||||
Sbjct: 134367 agcacatttgttttgtagttcagaagccaa 134396
to top
>gb|AF002993.1|HSAF002993 Homo sapiens cosmid from 7q22, complete sequence
          Length = 34921

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1520 ccctccgacttctttgttttgtcat 1496
to top
>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence
          Length = 215576

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    aaacctcaatatatctcttgg 265
              |||||||||||||||||||||
Sbjct: 168536 aaacctcaatatatctcttgg 168516
to top
>emb|AL096723.1|HSM800627 Homo sapiens mRNA; cDNA DKFZp564H2023 (from clone DKFZp564H2023)
          Length = 2983

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1212 ccctccgacttctttgttttgtcat 1188
to top
>emb|CR861036.1| Pongo pygmaeus mRNA; cDNA DKFZp470E1612 (from clone DKFZp470E1612)
          Length = 3035

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1233 ccctccgacttctttgttttgtcat 1209
to top
>gb|AC012588.14| Homo sapiens chromosome 18, clone RP11-17A19, complete sequence
          Length = 148738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    tctgttttgatgtcacaatta 39
             |||||||||||||||||||||
Sbjct: 93899 tctgttttgatgtcacaatta 93919
to top
>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence
          Length = 100538

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 417   atccagcaaaaagcattccaatcca 441
             ||||||||||| |||||||||||||
Sbjct: 26529 atccagcaaaacgcattccaatcca 26505
to top
>gb|AF248955.1| Homo sapiens arsenite-resistant protein ASR2 (ASR2) mRNA, complete
            cds
          Length = 2983

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1220 ccctccgacttctttgttttgtcat 1196
to top
>gb|AC090337.5| Homo sapiens chromosome 18, clone RP11-674P19, complete sequence
          Length = 183876

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 457   ttcttgttcccttgtcttctt 477
             |||||||||||||||||||||
Sbjct: 59853 ttcttgttcccttgtcttctt 59873
to top
>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence
          Length = 172358

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 220    ccctcctacttctttgttttgtcat 244
              |||||| ||||||||||||||||||
Sbjct: 126918 ccctccgacttctttgttttgtcat 126894
to top
>gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) gene, partial cds; ASR2
            (ASR2) gene, complete cds, alternatively spliced; thyroid
            receptor interacting protein 6 (TRIP6) gene, complete
            cds; cation-chloride cotransporter (CIP1) gene, complete
            cds, alternatively spliced; ephrin type-B receptor 4
            precursor (EPHB4) and zonadhesin (ZAN) genes, complete
            cds; and unknown gene
          Length = 117962

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 6533 ccctccgacttctttgttttgtcat 6557
to top
>gb|AC023510.16|AC023510 Homo sapiens 12 BAC RP11-713N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     gttttgatgtcacaattagtt 42
              |||||||||||||||||||||
Sbjct: 104099 gttttgatgtcacaattagtt 104119
to top
>gb|BC109117.1| Homo sapiens ARS2 protein, mRNA (cDNA clone MGC:126427
            IMAGE:40035609), complete cds
          Length = 2894

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1151 ccctccgacttctttgttttgtcat 1127
to top
>gb|BC069249.1| Homo sapiens ARS2 protein, mRNA (cDNA clone IMAGE:5427083), partial
           cds
          Length = 2581

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 220 ccctcctacttctttgttttgtcat 244
           |||||| ||||||||||||||||||
Sbjct: 798 ccctccgacttctttgttttgtcat 774
to top
>gb|BC109116.1| Homo sapiens cDNA clone IMAGE:40035608
          Length = 2905

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1147 ccctccgacttctttgttttgtcat 1123
to top
>ref|NM_182800.2| Homo sapiens ARS2 protein (ARS2), transcript variant 2, mRNA
          Length = 3065

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1296 ccctccgacttctttgttttgtcat 1272
to top
>ref|NM_015908.4| Homo sapiens ARS2 protein (ARS2), transcript variant 1, mRNA
          Length = 2994

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ccctcctacttctttgttttgtcat 244
            |||||| ||||||||||||||||||
Sbjct: 1222 ccctccgacttctttgttttgtcat 1198
to top
>ref|NM_001001991.1| Homo sapiens regeneration associated muscle protease (DKFZP586H2123),
            transcript variant 2, mRNA
          Length = 2747

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2735 ttttgtagttcagaagccaa 2716
to top
>ref|NM_015430.2| Homo sapiens regeneration associated muscle protease (DKFZP586H2123),
            transcript variant 1, mRNA
          Length = 2798

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2786 ttttgtagttcagaagccaa 2767
to top
>gb|BC038457.1| Homo sapiens regeneration associated muscle protease, mRNA (cDNA
            clone IMAGE:4526572), partial cds
          Length = 2350

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2265 ttttgtagttcagaagccaa 2246
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      tgatgtcacaattagttcac 45
               ||||||||||||||||||||
Sbjct: 1486182 tgatgtcacaattagttcac 1486201
to top
>gb|AY358346.1| Homo sapiens clone DNA58723 ELGC699 (UNQ699) mRNA, complete cds
          Length = 2846

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2717 ttttgtagttcagaagccaa 2698
to top
>emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in linkage group 15,
            complete sequence
          Length = 175019

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  tacttctttgttttgtcata 245
            ||||||||||||||||||||
Sbjct: 4488 tacttctttgttttgtcata 4469
to top
>gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 226956

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    tctgtcatgatttgaacagt 497
              ||||||||||||||||||||
Sbjct: 199696 tctgtcatgatttgaacagt 199677
to top
>gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence
          Length = 197449

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    aacaccccctcctacttctt 233
              ||||||||||||||||||||
Sbjct: 154865 aacaccccctcctacttctt 154884
to top
>emb|AL354984.17| Human DNA sequence from clone RP13-379L11 on chromosome 20 Contains a
            putative novel gene, ESTs, STSs and GSSs, complete
            sequence
          Length = 207694

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 576  tgaccctaaatccttcttgt 595
            ||||||||||||||||||||
Sbjct: 5842 tgaccctaaatccttcttgt 5823
to top
>emb|BX640676.1|HSM806734 Homo sapiens mRNA; cDNA DKFZp686N24154 (from clone DKFZp686N24154)
          Length = 3165

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 3138 ttttgtagttcagaagccaa 3119
to top
>emb|AL832391.1|HSM803699 Homo sapiens mRNA; cDNA DKFZp667H2312 (from clone DKFZp667H2312)
          Length = 2768

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2704 ttttgtagttcagaagccaa 2685
to top
>emb|AL050214.1|HSM800511 Homo sapiens mRNA; cDNA DKFZp586H2123 (from clone DKFZp586H2123);
            partial cds
          Length = 1088

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 1076 ttttgtagttcagaagccaa 1057
to top
>emb|CR857928.1| Pongo pygmaeus mRNA; cDNA DKFZp468N1810 (from clone DKFZp468N1810)
          Length = 2841

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2829 ttttgtagttcagaagccaa 2810
to top
>ref|NM_165193.1| Drosophila melanogaster Ugt36Bc CG17932-RB, transcript variant B
           (Ugt36Bc), mRNA
          Length = 1951

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 atgatggtcaacgaggtgct 292
           ||||||||||||||||||||
Sbjct: 790 atgatggtcaacgaggtgct 809
to top
>ref|NM_144370.2| Drosophila melanogaster Ugt36Bc CG17932-RA, transcript variant A
           (Ugt36Bc), mRNA
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 atgatggtcaacgaggtgct 292
           ||||||||||||||||||||
Sbjct: 770 atgatggtcaacgaggtgct 789
to top
>gb|AC012470.16| Homo sapiens chromosome 10 clone RP11-506P9, complete sequence
          Length = 122543

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     gaatacaaaactcaaggcca 65
              ||||||||||||||||||||
Sbjct: 117061 gaatacaaaactcaaggcca 117042
to top
>dbj|AK136904.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330174K12 product:somatostatin
           receptor 3, full insert sequence
          Length = 3930

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 ctcagctgtggtggtgctgc 376
           ||||||||||||||||||||
Sbjct: 911 ctcagctgtggtggtgctgc 930
to top
>gb|AY070939.1| Drosophila melanogaster RE03785 full length cDNA
          Length = 1946

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 atgatggtcaacgaggtgct 292
           ||||||||||||||||||||
Sbjct: 770 atgatggtcaacgaggtgct 789
to top
>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone
              BACR26O03, complete sequence
          Length = 175413

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    atgatggtcaacgaggtgct 292
              ||||||||||||||||||||
Sbjct: 173435 atgatggtcaacgaggtgct 173454
to top
>gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206093

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 632   ctcctttgtacagagcatca 651
             ||||||||||||||||||||
Sbjct: 26060 ctcctttgtacagagcatca 26079
to top
>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 168376

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 632    ctcctttgtacagagcatca 651
              ||||||||||||||||||||
Sbjct: 122943 ctcctttgtacagagcatca 122962
to top
>gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126E3 map 15q21.3, complete
              sequence
          Length = 166151

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     aaggccacaccaaaagcctc 78
              ||||||||||||||||||||
Sbjct: 145086 aaggccacaccaaaagcctc 145105
to top
>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
              BACR27M18, complete sequence
          Length = 170362

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    atgatggtcaacgaggtgct 292
              ||||||||||||||||||||
Sbjct: 167356 atgatggtcaacgaggtgct 167337
to top
>gb|AC025272.6|AC025272 Homo sapiens chromosome 15 clone RP11-548M13 map 15q21.3, complete
            sequence
          Length = 170749

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   aaggccacaccaaaagcctc 78
            ||||||||||||||||||||
Sbjct: 3005 aaggccacaccaaaagcctc 3024
to top
>emb|BX855594.2| Mouse DNA sequence from clone RP24-322M2 on chromosome 4, complete
             sequence
          Length = 81134

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   tcatcttcttgttcccttgt 471
             ||||||||||||||||||||
Sbjct: 33243 tcatcttcttgttcccttgt 33224
to top
>emb|AL831749.9| Mouse DNA sequence from clone RP23-99A5 on chromosome X, complete
             sequence
          Length = 189866

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   cctcctacttctttgttttgtcat 244
             ||||| ||||||||||||||||||
Sbjct: 35734 cctccaacttctttgttttgtcat 35757
to top
>emb|AL808104.14| Mouse DNA sequence from clone RP23-30M20 on chromosome 2, complete
              sequence
          Length = 199494

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tcagtgggtagtgacaacaa 123
              ||||||||||||||||||||
Sbjct: 152006 tcagtgggtagtgacaacaa 152025
to top
>gb|AC145042.3| Macropus eugenii clone ME_KBa-289E24, complete sequence
          Length = 161181

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   tgatgtcacaattagttcac 45
            ||||||||||||||||||||
Sbjct: 9163 tgatgtcacaattagttcac 9182
to top
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6, complete
              sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 460    ttgttcccttgtcttctttc 479
              ||||||||||||||||||||
Sbjct: 127087 ttgttcccttgtcttctttc 127068
to top
>gb|BC089434.1| Homo sapiens regeneration associated muscle protease, transcript
            variant 1, mRNA (cDNA clone MGC:105109 IMAGE:30558617),
            complete cds
          Length = 2797

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ttttgtagttcagaagccaa 407
            ||||||||||||||||||||
Sbjct: 2781 ttttgtagttcagaagccaa 2762
to top
>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete
              sequence
          Length = 262525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    atgatggtcaacgaggtgct 292
              ||||||||||||||||||||
Sbjct: 184469 atgatggtcaacgaggtgct 184488
to top
>gb|AC005872.2|AC005872 Homo sapiens chromosome 10 clone CIT987SK-1137I1, complete sequence
          Length = 89672

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gaatacaaaactcaaggcca 65
             ||||||||||||||||||||
Sbjct: 46196 gaatacaaaactcaaggcca 46215
to top
>ref|NM_009218.2| Mus musculus somatostatin receptor 3 (Sstr3), mRNA
          Length = 3930

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 ctcagctgtggtggtgctgc 376
           ||||||||||||||||||||
Sbjct: 911 ctcagctgtggtggtgctgc 930
to top
>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 183830

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 632   ctcctttgtacagagcatca 651
             ||||||||||||||||||||
Sbjct: 15553 ctcctttgtacagagcatca 15534
to top
>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete
             sequence
          Length = 213730

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   cctcctacttctttgttttgtcat 244
             ||||| ||||||||||||||||||
Sbjct: 71677 cctccaacttctttgttttgtcat 71654
to top
>emb|AL928640.3| Mouse DNA sequence from clone RP23-314C7 on chromosome 4, complete
             sequence
          Length = 104113

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   aacaccccctcctacttctt 233
             ||||||||||||||||||||
Sbjct: 50075 aacaccccctcctacttctt 50056
to top
>emb|AL671719.6| Mouse DNA sequence from clone RP23-287N11 on chromosome X, complete
             sequence
          Length = 40337

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   cctcctacttctttgttttgtcat 244
             ||||| ||||||||||||||||||
Sbjct: 35734 cctccaacttctttgttttgtcat 35757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,643,768
Number of Sequences: 3902068
Number of extensions: 6643768
Number of successful extensions: 121506
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121350
Number of HSP's gapped (non-prelim): 156
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top