>PARC_RICCN (Q92JH0) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 738

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = -1

Query: 694 AILKRQLWR*TMKMEQITIVKWIVEIQKLVIILESLSNGAYAHWGI*SHFLDSMQQRFGL 515
           AIL  +L R   K+E+  I+     +QK   ILE + N     W I    + ++Q +FGL
Sbjct: 419 AILNTRL-RSLRKLEEQEIINEHSNLQKQQAILEEILNNPKELWKIVKKEIKTVQTKFGL 477

Query: 514 TSACWTRRFSSGVFTLSS 461
            +    RR S    TL++
Sbjct: 478 NTVIGARRTSFEEVTLTN 495

>LEPA_BLOPB (Q492C9) GTP-binding protein lepA|
          Length = 600

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 710 VTFPVSDPEAATMEIDNENGADNNSQVDCGNTKAGYNIGEL 588
           +    +DP  A+ EI N  G D N+ + C + K GY I EL
Sbjct: 134 IDLSTADPNRASQEIKNIIGIDVNNAIQC-SAKTGYGIPEL 173

>L_NDVB (P11205) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2204

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 411  CNSPLIPHHHGLEDDL*KQAVITFLTNSEMSHPRI 307
            C++PL+   H  +++  ++A+  FL N E+ HPR+
Sbjct: 1003 CSNPLLSGVHTEDNEAEEKALAEFLLNQEVIHPRV 1037


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,523,374
Number of Sequences: 219361
Number of extensions: 2198839
Number of successful extensions: 4925
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4923
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)