ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37m23 |
|---|---|
| Clone Library Name | barley_pub |
>KPRS_BUCAI (P57266) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 315 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/57 (40%), Positives = 28/57 (49%) Frame = +1 Query: 175 NRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 NR C +++ DT GTL A LK+ GAK FA P G DA NL N + Sbjct: 213 NRDCILVDD-MIDTGGTLCKAAEALKERGAKRVFAYATHPVFSG--DAPKNLKNSVI 266
>TECTB_MOUSE (O08524) Beta-tectorin precursor| Length = 329 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = -2 Query: 557 PFQTRMISLSCPTEEPQIVRLKGKDWKVKQQPSQKPLKKNPSLKILHLH 411 P Q ++I+ CPT+E +V GKD + Q + + P L + LH Sbjct: 215 PLQWQLINKGCPTDETVLVHENGKDHRATFQFNAFRFQNIPKLSKVWLH 263
>KPRS1_ENTFA (Q82ZA5) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 323 Score = 31.6 bits (70), Expect = 2.2 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C +I+ DT GT+S+A + LK+AGAK +A P L G Sbjct: 217 VEGKTCVLIDD-MIDTAGTISLAANALKEAGAKDVYASCTHPVLSG 261
>KPRS_STAS1 (Q49V09) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDAR---SNLHNYTVTLGFQL 363 DT GT+++A LK GAK +AC P L G R S + VT QL Sbjct: 232 DTAGTITLAAQALKDKGAKDVYACCTHPVLSGPAKERIENSAIKELVVTNSIQL 285
>KPRS_STAES (Q8CQU7) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAEQ (Q5HRQ5) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAW (P65238) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAS (Q6GBY8) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAR (Q6GJH1) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAN (P65237) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAM (P65236) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>KPRS_STAAC (Q5HIH5) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKEVYACCTHPVLSG--PAKERIENSAI 274
>Y777_METJA (Q58187) Hypothetical protein MJ0777| Length = 191 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +3 Query: 339 HSYTWIPTLEASYYQMPL*FLKQNVQVKDLQRWILFQR 452 +SYTW+PTLE Y + K N +KDL++ + F++ Sbjct: 94 YSYTWLPTLEKLPYVVK---KKINELIKDLEKKLEFEK 128
>TECTB_HUMAN (Q96PL2) Beta-tectorin precursor| Length = 329 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -2 Query: 557 PFQTRMISLSCPTEEPQIVRLKGKDWKVKQQPSQKPLKKNPSLKILHLH 411 P Q ++I+ CPT+E +V G+D + Q + + P L + LH Sbjct: 215 PLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQNIPKLSKVWLH 263
>KPRS_STAHJ (Q4L3F7) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 321 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFGILDARSNLHNYTV 345 DT GT+++A LK GAK +AC P L G A+ + N + Sbjct: 232 DTAGTITLAAQALKDKGAKDVYACCTHPVLSG--PAKERIENSAI 274
>KPRS1_LISWE (Q83TK1) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 318 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C II+ DT GT+++A L++AGA +AC P L G Sbjct: 216 VEGKVCIIIDD-IIDTAGTITLAAKALREAGATKVYACCSHPVLSG 260
>KPRS1_LISMO (Q48793) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 318 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C II+ DT GT+++A L++AGA +AC P L G Sbjct: 216 VEGKVCIIIDD-IIDTAGTITLAAKALREAGATKVYACCSHPVLSG 260
>KPRS1_LISMF (Q724L4) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 318 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C II+ DT GT+++A L++AGA +AC P L G Sbjct: 216 VEGKVCIIIDD-IIDTAGTITLAAKALREAGATKVYACCSHPVLSG 260
>KPRS1_LISIV (Q83YI7) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 318 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C II+ DT GT+++A L++AGA +AC P L G Sbjct: 216 VEGKVCIIIDD-IIDTAGTITLAAKALREAGATKVYACCSHPVLSG 260
>KPRS1_LISIN (Q92F68) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (RPPK 1)| (Phosphoribosyl pyrophosphate synthetase 1) (P-Rib-PP synthetase 1) (PRPP synthetase 1) Length = 318 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 169 LKNRKCTIIEK*SRDTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 ++ + C II+ DT GT+++A L++AGA +AC P L G Sbjct: 216 VEGKVCIIIDD-IIDTAGTITLAAKALREAGATKVYACCSHPVLSG 260
>KPRS_BACCL (P42816) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 315 Score = 30.0 bits (66), Expect = 6.4 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 211 DTCGTLSVADSDLKQAGAKYWFACVYIPSLFG 306 DT GT+++A + L ++GAK +AC P L G Sbjct: 226 DTAGTITLAANALAESGAKEVYACCTHPVLSG 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,095,393 Number of Sequences: 219361 Number of extensions: 1780311 Number of successful extensions: 4835 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4705 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4835 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
