Clone Information

BLAST Search Result

Clone Name	rbags38b08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein ...	163	9e-42
2	DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-su...	164	1e-41
3	DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-su...	164	2e-41
4	DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein ...	160	3e-41
5	DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-su...	162	3e-41
6	DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-su...	166	6e-41
7	DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein ...	166	6e-41
8	DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-su...	160	1e-40
9	DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-su...	161	1e-40
10	DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone...	159	4e-40
11	DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-su...	160	3e-39
12	DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-su...	159	4e-39
13	DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-su...	154	3e-38
14	DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-su...	155	6e-38
15	DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-su...	150	3e-36
16	DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-su...	150	4e-36
17	DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-su...	149	4e-36
18	DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein ...	141	1e-33
19	DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-su...	142	1e-33
20	DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein ...	140	2e-33
21	DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulf...	137	4e-33
22	DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein ...	139	8e-33
23	FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1...	73	6e-13
24	FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1...	73	6e-13
25	FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1...	73	6e-13
26	FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1...	73	6e-13
27	FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1...	73	6e-13
28	FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1...	65	2e-10
29	FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1...	63	6e-10
30	FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1...	47	3e-05
31	FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1...	47	4e-05
32	FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1...	45	1e-04
33	DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein ...	45	2e-04
34	Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067	42	0.002
35	GLCF_ECOLI (P52074) Glycolate oxidase iron-sulfur subunit	42	0.002
36	Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092	40	0.005
37	HDRC_METAC (Q8TIB9) CoB--CoM heterodisulfide reductase 1 iron-su...	38	0.020
38	HDRC_METMA (Q8PY84) CoB--CoM heterodisulfide reductase 1 iron-su...	37	0.045
39	HDRC_METTH (O27906) CoB--CoM heterodisulfide reductase iron-sulf...	32	1.9
40	NQO9_THET8 (Q56224) NADH-quinone oxidoreductase subunit 9 (EC 1....	32	1.9
41	REPA_BACSU (P13962) Protein repA	31	2.5
42	RNFC_RHOCA (Q52716) Electron transport complex protein rnfC (Nit...	30	4.2
43	IF3I_HUMAN (Q9Y262) Eukaryotic translation initiation factor 3 s...	30	4.2
44	HDRC_METTM (Q50754) CoB--CoM heterodisulfide reductase iron-sulf...	30	4.2
45	DUET_HUMAN (Q9Y2A5) Serine/threonine-protein kinase Duet (EC 2.7...	30	4.2
46	FRHG_METTH (P19498) Coenzyme F420 hydrogenase gamma subunit (EC ...	30	4.2
47	ITPR3_HUMAN (Q14573) Inositol 1,4,5-trisphosphate receptor type ...	30	4.2
48	ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type ...	30	4.2
49	STRN_SORMA (Q70M86) Striatin Pro11	30	4.2
50	TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)	30	5.5
51	RNS10_HORSE (Q70IB3) Ribonuclease-like protein 10 precursor (Pro...	30	5.5
52	TRBM_CANFA (Q5W7P8) Thrombomodulin precursor (TM) (CD141 antigen)	30	5.5
53	HDRC_METKA (Q8TXT7) CoB--CoM heterodisulfide reductase iron-sulf...	30	7.2
54	VHCB_METVO (Q50849) Polyferredoxin protein vhcB	30	7.2
55	ITPR3_MOUSE (P70227) Inositol 1,4,5-trisphosphate receptor type ...	30	7.2
56	VG40_BPML5 (Q05250) Gene 40 protein (Gp40)	30	7.2
57	GLPC_ECOLI (P0A996) Anaerobic glycerol-3-phosphate dehydrogenase...	29	9.4
58	GLPC_ECO57 (P0A997) Anaerobic glycerol-3-phosphate dehydrogenase...	29	9.4
59	ITPR3_RAT (Q63269) Inositol 1,4,5-trisphosphate receptor type 3 ...	29	9.4
60	HDRC2_METJA (Q58274) CoB--CoM heterodisulfide reductase iron-sul...	29	9.4

>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  163 bits (413), Expect(2) = 9e-42
 Identities = 74/109 (67%), Positives = 82/109 (75%)
 Frame = -2

Query: 541 DPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQ 362
           D  +    E  QS  DR KLDG+YECILCACCSTSCPSYWWN ++YLGPA LL A RWI 
Sbjct: 146 DSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIA 205

Query: 361 DSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 215
           DSRD+ T ERL+++ D FKLYRCHTI NCT  CPKGLNPAK I  IK L
Sbjct: 206 DSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSL 254



 Score = 26.6 bits (57), Expect(2) = 9e-42
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGP 537
           QY+S+EPWLK   P
Sbjct: 135 QYESIEPWLKTDSP 148

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>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 282

 Score =  164 bits (415), Expect(2) = 1e-41
 Identities = 71/110 (64%), Positives = 84/110 (76%)
 Frame = -2

Query: 544 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 365
           KD +  G ++  QS  DR KLDG+YECILCACCSTSCPSYWWN ++YLGPA L+ A RW+
Sbjct: 162 KDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWM 221

Query: 364 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 215
            DSRD+FT+ERL  + D F +YRCHTI NCT  CPKGLNP K I  IKK+
Sbjct: 222 IDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKM 271



 Score = 25.4 bits (54), Expect(2) = 1e-41
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKRK 543
           QYKS+EP+LK+K
Sbjct: 151 QYKSIEPYLKKK 162

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>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 280

 Score =  164 bits (414), Expect(2) = 2e-41
 Identities = 71/110 (64%), Positives = 84/110 (76%)
 Frame = -2

Query: 544 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 365
           KD +  G ++  QS  +R KLDG+YECILCACCSTSCPSYWWN ++YLGPA L+ A RW+
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWM 219

Query: 364 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 215
            DSRD+FT+ERL  + D F LYRCHTI NCT  CPKGLNP K I  IKK+
Sbjct: 220 IDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKM 269



 Score = 25.4 bits (54), Expect(2) = 2e-41
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKRK 543
           QYKS+EP+LK+K
Sbjct: 149 QYKSIEPYLKKK 160

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>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  160 bits (406), Expect(2) = 3e-41
 Identities = 72/109 (66%), Positives = 81/109 (74%)
 Frame = -2

Query: 541 DPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQ 362
           D  +    E  QS  DR KLDG+YECILCACCSTSCPSYWWN ++YLGPA LL A RWI 
Sbjct: 146 DSPAPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIA 205

Query: 361 DSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 215
           DSRD+ T  RL+++ D FKLYRCHTI NCT  CPKGLNPAK I  +K L
Sbjct: 206 DSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNL 254



 Score = 27.7 bits (60), Expect(2) = 3e-41
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGPGVGRRE 519
           QY+S+EPWLK   P     E
Sbjct: 135 QYESIEPWLKNDSPAPSNSE 154

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>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score =  162 bits (411), Expect(2) = 3e-41
 Identities = 71/101 (70%), Positives = 81/101 (80%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KE YQS+ DR KLDG+YEC+LCACCSTSCPSYWWN ++YLGPA LL A RWI DSRD+ T
Sbjct: 133 KEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAYRWIVDSRDQGT 192

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
           +ERL  + D FKLYRCHTI NCT  CPK LNPA+ I  IK+
Sbjct: 193 RERLQYLEDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIKQ 233



 Score = 25.4 bits (54), Expect(2) = 3e-41
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 578 QYKSVEPWLK 549
           QYKS+EPW+K
Sbjct: 116 QYKSIEPWMK 125

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>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  166 bits (419), Expect(2) = 6e-41
 Identities = 75/109 (68%), Positives = 83/109 (76%)
 Frame = -2

Query: 544 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 365
           +D A   GKE  QS ADR KLDG+YECILCACCSTSCPSYWWN EEYLGPA LL + RWI
Sbjct: 183 RDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYRWI 242

Query: 364 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
            DSRDE T +R D++N+   LYRCHTI NC+  CPKGLNPA  I  IKK
Sbjct: 243 NDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKK 291



 Score = 21.6 bits (44), Expect(2) = 6e-41
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKR 546
           QYKS++P+L+R
Sbjct: 173 QYKSIKPYLQR 183

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>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 259

 Score =  166 bits (419), Expect = 6e-41
 Identities = 74/104 (71%), Positives = 84/104 (80%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KE  QS  DR KLDG+YEC++CA CST+CPSYWWN + YLGPAALLHA RWI DSRDE T
Sbjct: 152 KEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHAYRWIIDSRDEAT 211

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 209
            ERLDS+ D FKLYRCHTI NCT+ CPKGLNPAK I +IK + +
Sbjct: 212 GERLDSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHMMV 255

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>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  160 bits (405), Expect(2) = 1e-40
 Identities = 71/107 (66%), Positives = 81/107 (75%)
 Frame = -2

Query: 526 GGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDE 347
           G  +  QS  DR+KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI DSRDE
Sbjct: 175 GKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDE 234

Query: 346 FTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 206
            + ERL+ + D F +YRCHTI NCT  CPKGLNP + I  IKKL  G
Sbjct: 235 NSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 281



 Score = 25.8 bits (55), Expect(2) = 1e-40
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGPGVGRREG 516
           QY++++PWL+RK    G ++G
Sbjct: 156 QYRNIQPWLQRKNE-AGEKKG 175

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>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 252

 Score =  161 bits (408), Expect(2) = 1e-40
 Identities = 71/106 (66%), Positives = 80/106 (75%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KE YQS+ADRAKLDG+YECILCACCSTSCPSYWWN EEYLGPA L+ A RWI DSRD+ T
Sbjct: 147 KEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQAT 206

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLGA 203
            +RLD + +   +YRCHTI NC   CPKGLNP   I  +K L   A
Sbjct: 207 AKRLDVMQNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVKALMATA 252



 Score = 24.6 bits (52), Expect(2) = 1e-40
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 578 QYKSVEPWLK 549
           QYKS+EPWL+
Sbjct: 130 QYKSIEPWLQ 139

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>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur|
           protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP
           subunit of complex II)
          Length = 298

 Score =  159 bits (403), Expect(2) = 4e-40
 Identities = 68/113 (60%), Positives = 85/113 (75%)
 Frame = -2

Query: 544 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 365
           K P + G K+++QS A+R +LDG+YECILCACCSTSCPSYWWN ++YLGPA L+ A RW+
Sbjct: 174 KTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWV 233

Query: 364 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 206
            DSRD++  ERL  ++D F  ++CHTI NCT  CPK LNPAK I  IK L  G
Sbjct: 234 IDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTG 286



 Score = 25.0 bits (53), Expect(2) = 4e-40
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGP 537
           QY S++PW+++K P
Sbjct: 163 QYASIQPWIQKKTP 176

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>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 262

 Score =  160 bits (405), Expect = 3e-39
 Identities = 75/112 (66%), Positives = 83/112 (74%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KEIYQSK DR  LDG+YECILCACCS SCPSYWWN ++YLGPA LL A RWI DSRD+ T
Sbjct: 146 KEIYQSKQDRLYLDGLYECILCACCSASCPSYWWNHDKYLGPAVLLQAYRWIVDSRDDNT 205

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLGA*V*AEQ 185
             RL S+ D +KLYRCHTI NCT  CPK LNP K I +IKK  L   V  E+
Sbjct: 206 LSRLLSLKDSYKLYRCHTIMNCTKTCPKHLNPGKVIASIKKRLLNLEVLGEK 257

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>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 253

 Score =  159 bits (402), Expect(2) = 4e-39
 Identities = 70/104 (67%), Positives = 78/104 (75%)
 Frame = -2

Query: 529 AGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRD 350
           A GKE+ QS  DR KLDG+YECILCACCSTSCPSYWWN EEYLGPA L+ A RW+ DSRD
Sbjct: 145 ADGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRWLIDSRD 204

Query: 349 EFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
           + TK R   + +   LYRCHTI NCT  CPKGLNP + I  IKK
Sbjct: 205 QATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKK 248



 Score = 21.9 bits (45), Expect(2) = 4e-39
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKR 546
           QYKS++P+L+R
Sbjct: 130 QYKSIQPYLQR 140

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>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 283

 Score =  154 bits (388), Expect(2) = 3e-38
 Identities = 66/100 (66%), Positives = 76/100 (76%)
 Frame = -2

Query: 517 EIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTK 338
           E  QS  DR KLDGMYECILCACCSTSCPSYWWN +EYLGPA L+ A RW+ DSRD + +
Sbjct: 179 EFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDSYGE 238

Query: 337 ERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
           +R + + +   LYRCHTI NCT  CPKGLNPAK I  IK+
Sbjct: 239 DRKEKLQNTLSLYRCHTIFNCTKTCPKGLNPAKAISHIKR 278



 Score = 24.6 bits (52), Expect(2) = 3e-38
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGP 537
           QYKS+EP+LK   P
Sbjct: 161 QYKSIEPFLKNDNP 174

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>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 266

 Score =  155 bits (392), Expect(2) = 6e-38
 Identities = 72/114 (63%), Positives = 80/114 (70%)
 Frame = -2

Query: 559 RGSSAKDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLH 380
           R S  KD     G E+ QS  DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ 
Sbjct: 153 RSSFPKD-----GTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQ 207

Query: 379 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
           A RW+ DSRD+ TK R   +N+   LYRCHTI NCT  CPKGLNP   I  IKK
Sbjct: 208 AYRWLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKK 261



 Score = 21.9 bits (45), Expect(2) = 6e-38
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKR 546
           QYKS++P+L+R
Sbjct: 143 QYKSIQPYLQR 153

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>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 250

 Score =  150 bits (379), Expect(2) = 3e-36
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KE  QSK DR +LDG+YECILCACCS SCPSYWWN ++YLGPA LL A RWI DSRD  T
Sbjct: 145 KENLQSKIDRLELDGLYECILCACCSASCPSYWWNQDKYLGPAILLQAYRWIVDSRDNST 204

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
           + RL+ +N++ +L+RCHTI NC+  CPK LNP K I +IK
Sbjct: 205 ENRLNFLNNKMRLFRCHTIMNCSKTCPKSLNPGKAIASIK 244



 Score = 21.2 bits (43), Expect(2) = 3e-36
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 578 QYKSVEPWLKRK 543
           QYK ++PWL  K
Sbjct: 128 QYKLIKPWLINK 139

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>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 295

 Score =  150 bits (378), Expect(2) = 4e-36
 Identities = 64/100 (64%), Positives = 75/100 (75%)
 Frame = -2

Query: 517 EIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTK 338
           E  QS  +R +LDG+YECILCACCSTSCPSYWWN +EYLGPA L+ A RW+ DSRD+F +
Sbjct: 178 EHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDDFGE 237

Query: 337 ERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
           ER   + + F LYRCHTI NC+  CPK LNP K I  IKK
Sbjct: 238 ERRQKLENTFSLYRCHTIMNCSRTCPKNLNPGKAIAQIKK 277



 Score = 21.2 bits (43), Expect(2) = 4e-36
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -1

Query: 578 QYKSVEPWLK 549
           QY+S+EP+LK
Sbjct: 160 QYRSIEPFLK 169

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>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 261

 Score =  149 bits (376), Expect(2) = 4e-36
 Identities = 66/104 (63%), Positives = 76/104 (73%)
 Frame = -2

Query: 529 AGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRD 350
           A G+E  QS ADR KLDG+YECILCACCST+CPSYWWN E+YLGPA L+ A RW+ DSRD
Sbjct: 153 ADGREHLQSIADRKKLDGLYECILCACCSTACPSYWWNNEQYLGPAVLMQAYRWMVDSRD 212

Query: 349 EFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 218
                R + + +   +YRCHTI NCT  CPKGLNP K I  IKK
Sbjct: 213 GAGAGRREQLQNAMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKK 256



 Score = 21.9 bits (45), Expect(2) = 4e-36
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGPGVGRRE 519
           QYKS++P+L++       RE
Sbjct: 138 QYKSIQPYLQKASKPADGRE 157

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>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 235

 Score =  141 bits (356), Expect = 1e-33
 Identities = 61/100 (61%), Positives = 77/100 (77%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           KE  QS  +RAKLDG+YECILCACCS+SCPSYWWNP++++GPA LL + R+I DSRD   
Sbjct: 125 KERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYRFIADSRDSKE 184

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
           KERLD++ D + ++RC TI +C   CPK LNPAK I  I+
Sbjct: 185 KERLDAMKDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIR 224

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>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score =  142 bits (357), Expect(2) = 1e-33
 Identities = 61/99 (61%), Positives = 75/99 (75%)
 Frame = -2

Query: 517 EIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTK 338
           E  QS+ DR++L+G+YECILCACCS SCPSYWWN ++YLGPA LL A RW+ DSRD   K
Sbjct: 135 EYLQSEKDRSELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWLADSRDTNAK 194

Query: 337 ERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
           ERL  +  + KL++CHTI NC+  CPK LNP K I +IK
Sbjct: 195 ERLKLLGGKSKLFKCHTIMNCSRTCPKSLNPGKAIASIK 233



 Score = 20.8 bits (42), Expect(2) = 1e-33
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 578 QYKSVEPWLKRKGP 537
           QYK ++PWL    P
Sbjct: 118 QYKYIKPWLINNVP 131

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>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score =  140 bits (354), Expect = 2e-33
 Identities = 60/104 (57%), Positives = 76/104 (73%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           +E  Q    R KLDG+YECILCACCSTSCPS+WWNP++++GPA LL A R++ DSRD  T
Sbjct: 131 REHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTET 190

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 209
             RLD ++D F ++RCH+I NC   CPKGLNP + I  IK + L
Sbjct: 191 DSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLL 234

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>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II)
           (Fragment)
          Length = 143

 Score =  137 bits (344), Expect(2) = 4e-33
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -2

Query: 544 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 365
           KD +  G ++  QS  +R KLDG+YECILCACCSTSCPSYWWN ++YLGPA L+ A RW+
Sbjct: 54  KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWM 113

Query: 364 QDSRDEFTKERLDSINDEFKLYRCHTIKNC 275
            DSRD+FT+ERL  + D F LYRCHTI NC
Sbjct: 114 IDSRDDFTEERLAKLQDPFSLYRCHTIMNC 143



 Score = 24.3 bits (51), Expect(2) = 4e-33
 Identities = 8/12 (66%), Positives = 12/12 (100%)
 Frame = -1

Query: 578 QYKSVEPWLKRK 543
           QY+S+EP+LK+K
Sbjct: 43  QYRSIEPYLKKK 54

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>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score =  139 bits (349), Expect = 8e-33
 Identities = 59/104 (56%), Positives = 76/104 (73%)
 Frame = -2

Query: 520 KEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFT 341
           +E  Q    R KLDG+YECILCACCSTSCPS+WWNP++++GPA LL A R++ DSRD  T
Sbjct: 131 REHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTET 190

Query: 340 KERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 209
             RL+ ++D F ++RCH+I NC   CPKGLNP + I  IK + L
Sbjct: 191 DSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLL 234

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>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A  AK      CI C  C  +CP +  NPE ++GPAA+  A+R+ +DSRD   KER+
Sbjct: 134 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERM 192

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 233
             +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 193 AQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

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>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A  AK      CI C  C  +CP +  NPE ++GPAA+  A+R+ +DSRD   KER+
Sbjct: 134 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERM 192

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 233
             +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 193 AQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

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>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A  AK      CI C  C  +CP +  NPE ++GPAA+  A+R+ +DSRD   KER+
Sbjct: 134 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERM 192

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 233
             +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 193 AQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

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>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A  AK      CI C  C  +CP +  NPE ++GPAA+  A+R+ +DSRD   KER+
Sbjct: 134 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERM 192

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 233
             +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 193 AQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

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>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 244

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/92 (39%), Positives = 51/92 (55%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A  AK      CI C  C  +CP +  NPE ++GPAA+  A R+  DSRD   KER+
Sbjct: 135 QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAQRYNTDSRDHGAKERM 193

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 233
             +N E  ++ C  +  C+  CPK ++PA  I
Sbjct: 194 PQLNGENGVWSCTFVGYCSEVCPKHVDPAAAI 225

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>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 256

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 32/93 (34%), Positives = 51/93 (54%)
 Frame = -2

Query: 508 QSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL 329
           Q+ A   K      CI C  C  +CP +  NPE +LGPAA+  A+R+  D+RD    +R+
Sbjct: 146 QTPAQLEKYRQFSMCINCGLCYAACPQFGLNPE-FLGPAAITMAHRYNLDNRDHGKAKRM 204

Query: 328 DSINDEFKLYRCHTIKNCTHACPKGLNPAKQID 230
             +N +  ++ C  +  C+  CPK ++PA  I+
Sbjct: 205 SLLNGKNGVWSCTFVGYCSEVCPKHVDPASAIN 237

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>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 247

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -2

Query: 490 AKLDGMYE---CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSI 320
           A+LD   +   CI C  C ++CP Y  +P+ +LGPAA+    R+  DSRD+   +R D +
Sbjct: 138 AELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQRYNLDSRDQGAADRRDVL 196

Query: 319 NDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
                 + C  +  C+ ACPKG++PA  I   K
Sbjct: 197 AAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229

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>FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL-DSINDEFKLYRCH 290
           CI C CC  SC +    P  ++G A +  A R++ DS DE + +   + + D+  ++ C 
Sbjct: 154 CIECGCCIASCGTKLMRP-NFIGAAGMNRAMRFMIDSHDERSDDDFYELVGDDDGVFGCM 212

Query: 289 TIKNCTHACPKGLNPAKQIDTIKKLQL 209
           ++  C   CPK L     I T++   L
Sbjct: 213 SLIACHDTCPKELPLQSSIATLRNRML 239

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>FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL-DSINDEFKLYRCH 290
           CI C CC  SC +    P  ++G A +  A R++ DS DE   +   + + D+  ++ C 
Sbjct: 154 CIECGCCIASCGTKLMRP-NFIGAAGMNRAMRFMIDSHDERNDDDFYELVGDDDGVFGCM 212

Query: 289 TIKNCTHACPKGLNPAKQIDTIKKLQL 209
           ++  C   CPK L     I T++   L
Sbjct: 213 SLIACHDTCPKELPLQSSIATLRNRML 239

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>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 239

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL-DSINDEFKLYRCH 290
           CI C CC  +C +     E+++G A L    R++ D  DE T E   + I D+  ++ C 
Sbjct: 151 CIECGCCIAACGTKIMR-EDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCM 209

Query: 289 TIKNCTHACPKGLNPAKQIDTIKK 218
           T+  C   CPK L    +I  +++
Sbjct: 210 TLLACHDVCPKNLPLQSKIAYLRR 233

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>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 252

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -2

Query: 469 ECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTK-ERLDSINDEFKLYRC 293
           +C+ C  C  +CP+   +  +++GPA +     +         K ERL+++ DE  L  C
Sbjct: 153 KCMTCGVCLEACPNVN-SKSKFMGPAPMSQVRLFNAHPTGAMNKSERLEALMDEGGLADC 211

Query: 292 HTIKNCTHACPKGL 251
              +NC  +CPKG+
Sbjct: 212 GNSQNCVQSCPKGI 225

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>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHT 287
           CI C  C   CP+  ++   Y GP  +    R+  D +DE  +E+     DE  +Y C T
Sbjct: 137 CIDCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKDEIDREK--EAFDE-NIYNCTT 191

Query: 286 IKNCTHACPKGLN 248
              C   CPK ++
Sbjct: 192 CGRCVEVCPKEID 204

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>GLCF_ECOLI (P52074) Glycolate oxidase iron-sulfur subunit|
          Length = 407

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEF--TKERLDSINDEFKLYRC 293
           C+ C  C+ +CP+Y    +E  GP   ++  + + +  +    T+E LD         RC
Sbjct: 25  CVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVTLKTQEHLD---------RC 75

Query: 292 HTIKNCTHACPKGLNPAKQID 230
            T +NC   CP G+     +D
Sbjct: 76  LTCRNCETTCPSGVRYHNLLD 96

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>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092|
          Length = 489

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFK-LYRCH 290
           CI C  C + CP+      +Y GP  +    R+  D RDE  +E    I   F+ +Y C 
Sbjct: 134 CIDCLSCLSVCPAR--EVSDYPGPTFMRQLARFAFDKRDEDGRE----ITAYFENIYNCT 187

Query: 289 TIKNCTHACPKGLN 248
           T   C   CPK ++
Sbjct: 188 TCAKCVEVCPKEID 201

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>HDRC_METAC (Q8TIB9) CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 161

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 25/87 (28%), Positives = 40/87 (45%)
 Frame = -2

Query: 475 MYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYR 296
           +  C+ C  C+ SCPS         G    L+  R I+D+R    K R   ++D + L+ 
Sbjct: 16  LLSCMHCGICTGSCPS---------GRHTGLNTRRIIRDAR----KNRAAVLSD-YDLWL 61

Query: 295 CHTIKNCTHACPKGLNPAKQIDTIKKL 215
           C T   C   CP+G+     I  +++L
Sbjct: 62  CTTCYTCQERCPRGIPITDAILELRRL 88

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>HDRC_METMA (Q8PY84) CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 161

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHT 287
           C+ C  C+ SCPS         G    L+  R I+D+R    K R   ++D+  L+ C T
Sbjct: 19  CMHCGTCTGSCPS---------GRHTGLNTRRIIRDAR----KNRATVLSDD-ALWLCTT 64

Query: 286 IKNCTHACPKGL 251
              C   CP+G+
Sbjct: 65  CYTCQERCPRGI 76

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>HDRC_METTH (O27906) CoB--CoM heterodisulfide reductase iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 185

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 25/97 (25%), Positives = 37/97 (38%)
 Frame = -2

Query: 511 YQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKER 332
           +  K   A  D +  C  C  C+ SCPS    P  Y     +  AN  ++D         
Sbjct: 20  FSEKIKAAGGDSLEYCFQCGTCTGSCPSGRRTP--YRVRQIIRKANVGLKDE-------- 69

Query: 331 LDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
              I  +  L+ C T  +C   CP+     K +D +K
Sbjct: 70  ---IISDPALWMCTTCYSCQERCPR---KVKIVDVVK 100

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>NQO9_THET8 (Q56224) NADH-quinone oxidoreductase subunit 9 (EC 1.6.99.5) (NADH|
           dehydrogenase I chain 9) (NDH-1 subunit 9)
          Length = 182

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/76 (26%), Positives = 32/76 (42%)
 Frame = -2

Query: 481 DGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKL 302
           +G+ +CI C+ C+ +CP+Y      Y+ PA          D  +  +     +   E  +
Sbjct: 48  NGLEKCIGCSLCAAACPAY----AIYVEPAE--------NDPENPVSAGERYAKVYEINM 95

Query: 301 YRCHTIKNCTHACPKG 254
            RC     C  ACP G
Sbjct: 96  LRCIFCGLCEEACPTG 111

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>REPA_BACSU (P13962) Protein repA|
          Length = 396

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +2

Query: 35  KEQNLVAIIHSLHGIARRFHPLFVRVETMEQKQTKWQADYNFPTSPRGKT 184
           K +N++   + LH I R++ PL        +K   W  DYN  +   GKT
Sbjct: 106 KPKNIIVYEYPLHEIERKYKPL--------EKLRDWDKDYNSVSKELGKT 147

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>RNFC_RHOCA (Q52716) Electron transport complex protein rnfC (Nitrogen fixation|
           protein rnfC)
          Length = 519

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 514 IYQSKADRAKLDGMYECILCACCSTSCPS 428
           I+    + A   G+ +C+ C CCS +CP+
Sbjct: 404 IHAGDLEGAAKVGLMDCLACGCCSYNCPA 432

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>IF3I_HUMAN (Q9Y262) Eukaryotic translation initiation factor 3 subunit|
           6-interacting protein
          Length = 564

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 17/74 (22%)
 Frame = -2

Query: 400 GPAALLHANRWIQDSRDEF-----------------TKERLDSINDEFKLYRCHTIKNCT 272
           GPA L   N+W+ D  DEF                 ++E +D +    K++  H++ N  
Sbjct: 172 GPAPLELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVL 231

Query: 271 HACPKGLNPAKQID 230
           H+     N  +Q++
Sbjct: 232 HSLVDKSNINRQLE 245

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>HDRC_METTM (Q50754) CoB--CoM heterodisulfide reductase iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 184

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 25/97 (25%), Positives = 36/97 (37%)
 Frame = -2

Query: 511 YQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKER 332
           +  K   A  D +  C  C  C+ SCPS    P  Y     +  AN  ++D         
Sbjct: 19  FSEKIKAAGGDSLEYCFQCGTCTGSCPSGRRTP--YRVRQIIRKANVGLKDE-------- 68

Query: 331 LDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 221
              I  +  L+ C T   C   CP+     K +D +K
Sbjct: 69  ---IISDPTLWMCTTCYYCQERCPR---KVKIVDVVK 99

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>DUET_HUMAN (Q9Y2A5) Serine/threonine-protein kinase Duet (EC 2.7.11.1)|
            (Serine/threonine kinase with Dbl- and pleckstrin
            homology domain)
          Length = 1289

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = +2

Query: 239  LCRVQPLGAGMRAVL----DGVAAVQLELVVDGVKALLCELITAVLDPPVGMEQRCGAEI 406
            +C + P  +G+   +     G  +    + V GV A          + P+  E+ C + I
Sbjct: 838  ICNLMPQDSGIYTCIATNDHGTTSTSATVKVQGVPA--------APNRPIAQERSCTSVI 889

Query: 407  LFWVPPVGRAGCGAAG 454
            L W+PP     C  +G
Sbjct: 890  LRWLPPSSTGNCTISG 905

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>FRHG_METTH (P19498) Coenzyme F420 hydrogenase gamma subunit (EC 1.12.98.1)|
           (8-hydroxy-5-deazaflavin-reducing hydrogenase gamma
           subunit) (FRH)
          Length = 235

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYL 401
           CI C  C   CP  WW PEE +
Sbjct: 209 CIKCGICYVQCPRSWW-PEEQI 229

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>ITPR3_HUMAN (Q14573) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2671

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 254  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 385
            P+G G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

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>ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2664

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 254  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 385
            P+G G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1702 PMGTGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1745

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>STRN_SORMA (Q70M86) Striatin Pro11|
          Length = 845

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 397 GRDTLLGSTSRTGRMWSSRRRGCTR--TCHRAWRG 495
           GR+ +      + R WS   R CT+  TCHR+ RG
Sbjct: 782 GRELVSAGHDMSLRFWSLETRSCTQEMTCHRSMRG 816

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>TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)|
          Length = 277

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 311 VQAVPLPHHQELHACLPQGAEPCKADRHNKEAAARSLSVSRAGSSPVEMSESCNQPAIWF 132
           VQ V LP H+E    +  G     +   N ++A  S    RA + P    E C+   +WF
Sbjct: 152 VQPVELPEHEEP---VEPGTMATVSGWGNTQSAVESSDFLRAANVPTVSHEDCSDAYMWF 208

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>RNS10_HORSE (Q70IB3) Ribonuclease-like protein 10 precursor (Protein Train A)|
           (Fragment)
          Length = 165

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 412 EEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHAC-PKGLNPAKQ 236
           E+ +G   +L A+   Q  +D     RLD +N E      H +K   H C P+     ++
Sbjct: 88  EDEVGGNKMLRADALFQSDKDYL---RLDLMNRECNSLMAHKVKKRNHTCIPEYTFIHEE 144

Query: 235 IDTIK 221
           +DT+K
Sbjct: 145 LDTVK 149

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>TRBM_CANFA (Q5W7P8) Thrombomodulin precursor (TM) (CD141 antigen)|
          Length = 578

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +2

Query: 254 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGMEQRCGA 400
           P+G     VL G++   L LVV  + ALLC L      P   +E +CGA
Sbjct: 512 PVGPVHSGVLIGISIASLSLVV-ALLALLCHLRKKQGAPRAELEYKCGA 559

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>HDRC_METKA (Q8TXT7) CoB--CoM heterodisulfide reductase iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 192

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
 Frame = -2

Query: 517 EIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTK 338
           E+ +   +  ++  +  C  C  C+ SCPS                  R    +R    K
Sbjct: 24  ELVEPVFEEEEVLSVQACYQCGTCTGSCPS----------------GRRTSYRTRLIMRK 67

Query: 337 ERLDSINDEFK---LYRCHTIKNCTHACPKGLNPAKQIDTIK 221
            +L  +++  K   L+ C T   C   CP+G+   K +D +K
Sbjct: 68  LQLGLVDEVIKSDELWMCTTCYTCYERCPRGV---KIVDAVK 106

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>VHCB_METVO (Q50849) Polyferredoxin protein vhcB|
          Length = 157

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = -2

Query: 505 SKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERLD 326
           S+A   + +    C LC  C ++CP+      E L    ++H  +  +  R EFT    D
Sbjct: 59  SRAKTERANEFKMCDLCGTCVSACPT------EALQMGKIVHNEK--EYDRIEFTPSLCD 110

Query: 325 S--------------INDEFKLYR-CHTIKNCTHACPK 257
           S              +N+E+KL   C     C  AC K
Sbjct: 111 SCGACVEICPQNVLKLNEEYKLKGFCVMCLKCIDACDK 148

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>ITPR3_MOUSE (P70227) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2670

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 254  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 385
            P G+G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PTGSGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

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>VG40_BPML5 (Q05250) Gene 40 protein (Gp40)|
          Length = 37

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 478 GMYECILCACCSTSCPSYWWNPEEYL 401
           G YEC  C CC  +C    W+ E+ L
Sbjct: 12  GTYECGCCTCCGCTCYYDEWDEEDDL 37

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>GLPC_ECOLI (P0A996) Anaerobic glycerol-3-phosphate dehydrogenase subunit C|
           (G-3-P dehydrogenase)
          Length = 396

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRD-EFTKERLDSINDEFKLYRCH 290
           CI C  C+T+CP    NP  Y GP          Q   D E  + +  ++ DE   Y C 
Sbjct: 9   CIKCTVCTTACPVSRVNP-GYPGPK---------QAGPDGERLRLKDGALYDEALKY-CI 57

Query: 289 TIKNCTHACP 260
             K C  ACP
Sbjct: 58  NCKRCEVACP 67

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>GLPC_ECO57 (P0A997) Anaerobic glycerol-3-phosphate dehydrogenase subunit C|
           (G-3-P dehydrogenase)
          Length = 396

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRD-EFTKERLDSINDEFKLYRCH 290
           CI C  C+T+CP    NP  Y GP          Q   D E  + +  ++ DE   Y C 
Sbjct: 9   CIKCTVCTTACPVSRVNP-GYPGPK---------QAGPDGERLRLKDGALYDEALKY-CI 57

Query: 289 TIKNCTHACP 260
             K C  ACP
Sbjct: 58  NCKRCEVACP 67

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>ITPR3_RAT (Q63269) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3) (IP3R-3)
          Length = 2670

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 254  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 385
            P G+G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PTGSGVDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

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>HDRC2_METJA (Q58274) CoB--CoM heterodisulfide reductase iron-sulfur subunit C 2|
           (EC 1.8.98.1)
          Length = 186

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
 Frame = -2

Query: 466 CILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDEFTKERL--DSINDEFKLYRC 293
           C  C  C+ SCPS                  R    +R    K  L  D + D   ++ C
Sbjct: 36  CYQCGTCTGSCPS----------------GRRTAYRTRKVLRKVLLGLDDVLDSDDIWYC 79

Query: 292 HTIKNCTHACPKGLNPAKQIDTIKKL 215
            T   C   CP+ +   + I T++ +
Sbjct: 80  TTCYTCYERCPRDVKITEIIKTLRNI 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,110,101
Number of Sequences: 219361
Number of extensions: 2039659
Number of successful extensions: 6973
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 6567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6943
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result