>RR12_CHLRE (P14149) Chloroplast 30S ribosomal protein S12|
          Length = 132

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 129 QQVLKSARKVIP*NSESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           QQ+++SARK I   ++SP  K+C Q   +  R  +     P   +R V + R        
Sbjct: 4   QQLIRSARKKITKKTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVR-----LTT 58

Query: 309 GFQIRTY 329
           GF++  Y
Sbjct: 59  GFEVTAY 65

>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase substrate 8|
          Length = 821

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 174 ESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           ++ P+K    ++  + R SS L  +  + +  +D RR WW V +A
Sbjct: 528 KTQPKKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNA 572

>ZCH11_HUMAN (Q5TAX3) Zinc finger CCHC domain-containing protein 11|
          Length = 1644

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 166 KILNHLQKKIVHKSILCCFVDQVPYVTCQKKKSDLLTSVGVG 291
           K+L  L+K +++  +   F  +VP V C+ +KS LL  V  G
Sbjct: 431 KVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAG 472

>RS12_SYNP7 (P63200) 30S ribosomal protein S12|
          Length = 124

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 129 QQVLKSARKVIP*NSESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           QQ+++  R+ I   ++SP  KNC Q   +  R  +T    P   +R V + R       +
Sbjct: 5   QQLIRDEREKITKKTKSPALKNCPQRRGVCTRVYTTTPKKPNSALRKVARVR-----LTS 59

Query: 309 GFQIRTY 329
           GF++  Y
Sbjct: 60  GFEVTAY 66

>RS12_SYNP6 (P63199) 30S ribosomal protein S12|
          Length = 124

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 129 QQVLKSARKVIP*NSESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           QQ+++  R+ I   ++SP  KNC Q   +  R  +T    P   +R V + R       +
Sbjct: 5   QQLIRDEREKITKKTKSPALKNCPQRRGVCTRVYTTTPKKPNSALRKVARVR-----LTS 59

Query: 309 GFQIRTY 329
           GF++  Y
Sbjct: 60  GFEVTAY 66

>K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment)|
          Length = 884

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = -2

Query: 497 RQKSEYTRFTRNILPTRLNLKVVTCLGSLKEVLQIW*MRPGSAQHRISSTSQRGSVVCSD 318
           RQK+E       +      L  +    S ++ L  W +R  +A+HR SS       + ++
Sbjct: 9   RQKTENVSTCARVAAASRGLPQMQNPPSARKALCNW-VRMAAAEHRHSSGLPYWPYLTAE 67

Query: 317 -LKACMGHKPPTPT 279
            LK  MGH+PP PT
Sbjct: 68  TLKNRMGHQPPPPT 81

>RS12_SPIPL (P13576) 30S ribosomal protein S12|
          Length = 124

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +3

Query: 129 QQVLKSARKVIP*NSESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           QQ+++SAR+     ++SP  K+C Q   +  R  +T    P   +R V + R       +
Sbjct: 5   QQLIRSAREKTDKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVR-----LTS 59

Query: 309 GFQIRTY 329
           GF++  Y
Sbjct: 60  GFEVTAY 66

>RR12_PSINU (Q8W8R9) Chloroplast 30S ribosomal protein S12|
          Length = 123

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +3

Query: 129 QQVLKSARKVIP*NSESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           QQ++++AR+ I   ++SP  + C Q   +  R  +T    P   +R V + R       +
Sbjct: 5   QQLIRNARQPIRSRTKSPALRGCPQRRGVCIRVYTTTPKKPNSALRKVARVR-----LTS 59

Query: 309 GFQIRTY 329
           GF+I  Y
Sbjct: 60  GFEITAY 66

>EPS8_PONPY (Q5R4H4) Epidermal growth factor receptor kinase substrate 8|
          Length = 822

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 174 ESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           ++ P+K    ++  + R +S L  L  + +  +D R+ WW V +A
Sbjct: 529 KTQPKKYAKSKYDFVARNNSELSVLKDDILEILDDRKQWWKVRNA 573

>EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase substrate 8|
          Length = 822

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 174 ESPPEKNCSQEHTLLFRGSSTLRHLPKEKIRFVDQRRGWWLVAHA 308
           ++ P+K    ++  + R +S L  L  + +  +D R+ WW V +A
Sbjct: 529 KTQPKKYAKSKYDFVARNNSELSVLKDDILEILDDRKQWWKVRNA 573


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,142,679
Number of Sequences: 219361
Number of extensions: 2145181
Number of successful extensions: 5002
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5002
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7422931207
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)