ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478973.1| Oryza sativa (japonica cultivar-group), mRNA 246 8e-62
2dbj|AK099740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 8e-62
3dbj|AK061647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 8e-62
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
5dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
6gb|AY110083.1| Zea mays CL7442_1 mRNA sequence 96 2e-16
7gb|AY395816.1| Lonchophylla handleyi 12S ribosomal RNA gene, par... 44 0.57
8gb|AF345922.1| Furipterus horrens strain ROM100202 12S ribosomal... 44 0.57
9gb|AF263233.1| Thyroptera tricolor 12S ribosomal RNA gene, compl... 44 0.57
10gb|AF411542.1|AF411542 Phylloderma stenops 12S ribosomal RNA gen... 44 0.57
11gb|AF411541.1|AF411541 Phyllostomus hastatus 12S ribosomal RNA g... 44 0.57
12gb|AC110735.6| Mus musculus chromosome 1, clone RP24-123P22, com... 42 2.3
13ref|XM_763902.1| Giardia lamblia ATCC 50803 hypothetical protein... 42 2.3
14gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, compl... 42 2.3
15dbj|AK036462.1| Mus musculus adult male bone cDNA, RIKEN full-le... 42 2.3
16emb|AL928927.10| Zebrafish DNA sequence from clone CH211-113H16,... 42 2.3
17gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, comple... 42 2.3
18gb|AC125212.3| Mus musculus BAC clone RP23-131D6 from chromosome... 42 2.3
19gb|AY823670.1| Mus musculus 2010007H12Rik (2010007H12Rik), BIPL1... 42 2.3
20gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 m... 42 2.3
21gb|AC166289.4| Mus musculus chromosome 7, clone RP24-132A16, com... 40 8.9
22ref|XM_424759.1| PREDICTED: Gallus gallus similar to 3-phosphati... 40 8.9
23gb|AY395805.1| Artibeus obscurus 12S ribosomal RNA gene, partial... 40 8.9
24gb|AC101762.7| Mus musculus chromosome 7, clone RP24-315G8, comp... 40 8.9
25gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, co... 40 8.9
26emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 8.9
27emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 ... 40 8.9
28emb|AL954235.1| Pan troglodytes chromosome 22 clone RP43-030A20 ... 40 8.9
29gb|AF263226.1| Artibeus jamaicensis isolate TK267999 12S ribosom... 40 8.9
30gb|AF263225.1| Artibeus jamaicensis isolate TK267998 12S ribosom... 40 8.9
31gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, compl... 40 8.9
32dbj|AK012876.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 8.9
33gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X... 40 8.9
34gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, co... 40 8.9
35gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complet... 40 8.9
36gb|AC007842.1|AC007842 Homo sapiens chromosome 19, BAC 331191 (C... 40 8.9
37gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome ... 40 8.9 
>ref|XM_478973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2311

 Score =  246 bits (124), Expect = 8e-62
 Identities = 256/299 (85%), Gaps = 6/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
            ||||||||||||||| |||||||||||  |  ||||  |||||||||||||||| |||||
Sbjct: 1941 ttatagcggttggagctcttgctcaggaactgctgaatccacaggtctatatgccgcttg 1882

                                                                        
Query: 417  acctctaaatttcttcctccacagatacagtcctaaaaaggccgataaagacaggaaaac 476
            ||||||||||||||| ||||| | |  |||| |||||| ||||||||||| ||| |||||
Sbjct: 1881 acctctaaatttctttctccagacaatcagtactaaaagggccgataaagtcagcaaaac 1822

                                                                        
Query: 477  tactagcaaaactccaaccagtatggagacaacatgttcttgcaaccatgaccttctcga 536
             |||||||||| ||||| |||||| ||||| ||||| ||| | |||||||||||  | ||
Sbjct: 1821 aactagcaaaattccaagcagtatagagactacatgatctcggaaccatgacctcttgga 1762

                                                                        
Query: 537  tataggttgctgcacattccactcaagtaactgataactgccaagatgttcangcaactg 596
            || ||   ||||||||||||| ||||||||||||||||||||||||| |||| |||||||
Sbjct: 1761 taaag---gctgcacattccattcaagtaactgataactgccaagattttcaggcaactg 1705

                                                                       
Query: 597  aacatgatgttg---cagccgataaatgatacccattgctgttgcattagacatagaat 652
             || ||||||||   || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1704 gacgtgatgttgggtcaaccgataaatgatacccattgctgttgtattagtcatagaat 1646



 Score =  184 bits (93), Expect = 2e-43
 Identities = 169/193 (87%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                        
Query: 60   tctattctatttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag 119
            ||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||
Sbjct: 2230 tctattctacttaatctacattacacgaacaaaaccttcttctactgtaagctacaagag 2171

                                                                        
Query: 120  ggagcccttgatctgaatcgctagatagtttatgaactaattctctaagttttgaaccaa 179
            | ||| ||||||||||||||||||| |||||||||||  |  ||||||||  |||| | |
Sbjct: 2170 gaagctcttgatctgaatcgctagacagtttatgaacagaggctctaagtgctgaatcga 2111

                                                                        
Query: 180  caagtcatgtaatcatgtgcttcttctgtaagctagatgctttgtgttacatacaaagga 239
             |||| |||||||| ||||||||||||||||||| |  || ||||||||||||||||| |
Sbjct: 2110 gaagttatgtaatcttgtgcttcttctgtaagcttgtagc-ttgtgttacatacaaagaa 2052

                         
Query: 240  aaagggctactcc 252
            ||||||| |||||
Sbjct: 2051 aaagggcaactcc 2039
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>dbj|AK099740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C13, full
            insert sequence
          Length = 2311

 Score =  246 bits (124), Expect = 8e-62
 Identities = 256/299 (85%), Gaps = 6/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
            ||||||||||||||| |||||||||||  |  ||||  |||||||||||||||| |||||
Sbjct: 1941 ttatagcggttggagctcttgctcaggaactgctgaatccacaggtctatatgccgcttg 1882

                                                                        
Query: 417  acctctaaatttcttcctccacagatacagtcctaaaaaggccgataaagacaggaaaac 476
            ||||||||||||||| ||||| | |  |||| |||||| ||||||||||| ||| |||||
Sbjct: 1881 acctctaaatttctttctccagacaatcagtactaaaagggccgataaagtcagcaaaac 1822

                                                                        
Query: 477  tactagcaaaactccaaccagtatggagacaacatgttcttgcaaccatgaccttctcga 536
             |||||||||| ||||| |||||| ||||| ||||| ||| | |||||||||||  | ||
Sbjct: 1821 aactagcaaaattccaagcagtatagagactacatgatctcggaaccatgacctcttgga 1762

                                                                        
Query: 537  tataggttgctgcacattccactcaagtaactgataactgccaagatgttcangcaactg 596
            || ||   ||||||||||||| ||||||||||||||||||||||||| |||| |||||||
Sbjct: 1761 taaag---gctgcacattccattcaagtaactgataactgccaagattttcaggcaactg 1705

                                                                       
Query: 597  aacatgatgttg---cagccgataaatgatacccattgctgttgcattagacatagaat 652
             || ||||||||   || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1704 gacgtgatgttgggtcaaccgataaatgatacccattgctgttgtattagtcatagaat 1646



 Score =  184 bits (93), Expect = 2e-43
 Identities = 169/193 (87%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                        
Query: 60   tctattctatttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag 119
            ||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||
Sbjct: 2230 tctattctacttaatctacattacacgaacaaaaccttcttctactgtaagctacaagag 2171

                                                                        
Query: 120  ggagcccttgatctgaatcgctagatagtttatgaactaattctctaagttttgaaccaa 179
            | ||| ||||||||||||||||||| |||||||||||  |  ||||||||  |||| | |
Sbjct: 2170 gaagctcttgatctgaatcgctagacagtttatgaacagaggctctaagtgctgaatcga 2111

                                                                        
Query: 180  caagtcatgtaatcatgtgcttcttctgtaagctagatgctttgtgttacatacaaagga 239
             |||| |||||||| ||||||||||||||||||| |  || ||||||||||||||||| |
Sbjct: 2110 gaagttatgtaatcttgtgcttcttctgtaagcttgtagc-ttgtgttacatacaaagaa 2052

                         
Query: 240  aaagggctactcc 252
            ||||||| |||||
Sbjct: 2051 aaagggcaactcc 2039
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>dbj|AK061647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B11, full
            insert sequence
          Length = 1386

 Score =  246 bits (124), Expect = 8e-62
 Identities = 256/299 (85%), Gaps = 6/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
            ||||||||||||||| |||||||||||  |  ||||  |||||||||||||||| |||||
Sbjct: 1017 ttatagcggttggagctcttgctcaggaactgctgaatccacaggtctatatgccgcttg 958

                                                                        
Query: 417  acctctaaatttcttcctccacagatacagtcctaaaaaggccgataaagacaggaaaac 476
            ||||||||||||||| ||||| | |  |||| |||||| ||||||||||| ||| |||||
Sbjct: 957  acctctaaatttctttctccagacaatcagtactaaaagggccgataaagtcagcaaaac 898

                                                                        
Query: 477  tactagcaaaactccaaccagtatggagacaacatgttcttgcaaccatgaccttctcga 536
             |||||||||| ||||| |||||| ||||| ||||| ||| | |||||||||||  | ||
Sbjct: 897  aactagcaaaattccaagcagtatagagactacatgatctcggaaccatgacctcttgga 838

                                                                        
Query: 537  tataggttgctgcacattccactcaagtaactgataactgccaagatgttcangcaactg 596
            || ||   ||||||||||||| ||||||||||||||||||||||||| |||| |||||||
Sbjct: 837  taaag---gctgcacattccattcaagtaactgataactgccaagattttcaggcaactg 781

                                                                       
Query: 597  aacatgatgttg---cagccgataaatgatacccattgctgttgcattagacatagaat 652
             || ||||||||   || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 780  gacgtgatgttgggtcaaccgataaatgatacccattgctgttgtattagtcatagaat 722



 Score =  184 bits (93), Expect = 2e-43
 Identities = 169/193 (87%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                        
Query: 60   tctattctatttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag 119
            ||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||
Sbjct: 1306 tctattctacttaatctacattacacgaacaaaaccttcttctactgtaagctacaagag 1247

                                                                        
Query: 120  ggagcccttgatctgaatcgctagatagtttatgaactaattctctaagttttgaaccaa 179
            | ||| ||||||||||||||||||| |||||||||||  |  ||||||||  |||| | |
Sbjct: 1246 gaagctcttgatctgaatcgctagacagtttatgaacagaggctctaagtgctgaatcga 1187

                                                                        
Query: 180  caagtcatgtaatcatgtgcttcttctgtaagctagatgctttgtgttacatacaaagga 239
             |||| |||||||| ||||||||||||||||||| |  || ||||||||||||||||| |
Sbjct: 1186 gaagttatgtaatcttgtgcttcttctgtaagcttgtagc-ttgtgttacatacaaagaa 1128

                         
Query: 240  aaagggctactcc 252
            ||||||| |||||
Sbjct: 1127 aaagggcaactcc 1115
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  184 bits (93), Expect = 2e-43
 Identities = 169/193 (87%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                            
Query: 60       tctattctatttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag 119
                ||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||
Sbjct: 24076217 tctattctacttaatctacattacacgaacaaaaccttcttctactgtaagctacaagag 24076276

                                                                            
Query: 120      ggagcccttgatctgaatcgctagatagtttatgaactaattctctaagttttgaaccaa 179
                | ||| ||||||||||||||||||| |||||||||||  |  ||||||||  |||| | |
Sbjct: 24076277 gaagctcttgatctgaatcgctagacagtttatgaacagaggctctaagtgctgaatcga 24076336

                                                                            
Query: 180      caagtcatgtaatcatgtgcttcttctgtaagctagatgctttgtgttacatacaaagga 239
                 |||| |||||||| ||||||||||||||||||| |  || ||||||||||||||||| |
Sbjct: 24076337 gaagttatgtaatcttgtgcttcttctgtaagcttgtagc-ttgtgttacatacaaagaa 24076395

                             
Query: 240      aaagggctactcc 252
                ||||||| |||||
Sbjct: 24076396 aaagggcaactcc 24076408



 Score =  147 bits (74), Expect = 5e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                            
Query: 357      ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
                ||||||||||||||| |||||||||||  |  ||||  |||||||||||||||| |||||
Sbjct: 24076506 ttatagcggttggagctcttgctcaggaactgctgaatccacaggtctatatgccgcttg 24076565

                                                                            
Query: 417      acctctaaatttcttcctccacagatacagtcctaaaaaggccgataaagacaggaaaac 476
                ||||||||||||||| ||||| | |  |||| |||||| ||||||||||| ||| |||||
Sbjct: 24076566 acctctaaatttctttctccagacaatcagtactaaaagggccgataaagtcagcaaaac 24076625

                                                                      
Query: 477      tactagcaaaactccaaccagtatggagacaacatgttcttgcaaccatgacct 530
                 |||||||||| ||||| |||||| ||||| ||||| ||| | |||||||||||
Sbjct: 24076626 aactagcaaaattccaagcagtatagagactacatgatctcggaaccatgacct 24076679



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                            
Query: 545      gctgcacattccactcaagtaactgataactgccaagatgttcangcaactgaacatgat 604
                ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| || ||||
Sbjct: 24077182 gctgcacattccattcaagtaactgataactgccaagattttcaggcaactggacgtgat 24077241

                                          
Query: 605      gttg---cagccgataaatgataccc 627
                ||||   || ||||||||||||||||
Sbjct: 24077242 gttgggtcaaccgataaatgataccc 24077267
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>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1710_H11
          Length = 136107

 Score =  184 bits (93), Expect = 2e-43
 Identities = 169/193 (87%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                        
Query: 60   tctattctatttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag 119
            ||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||
Sbjct: 9632 tctattctacttaatctacattacacgaacaaaaccttcttctactgtaagctacaagag 9691

                                                                        
Query: 120  ggagcccttgatctgaatcgctagatagtttatgaactaattctctaagttttgaaccaa 179
            | ||| ||||||||||||||||||| |||||||||||  |  ||||||||  |||| | |
Sbjct: 9692 gaagctcttgatctgaatcgctagacagtttatgaacagaggctctaagtgctgaatcga 9751

                                                                        
Query: 180  caagtcatgtaatcatgtgcttcttctgtaagctagatgctttgtgttacatacaaagga 239
             |||| |||||||| ||||||||||||||||||| |  || ||||||||||||||||| |
Sbjct: 9752 gaagttatgtaatcttgtgcttcttctgtaagcttgtagc-ttgtgttacatacaaagaa 9810

                         
Query: 240  aaagggctactcc 252
            ||||||| |||||
Sbjct: 9811 aaagggcaactcc 9823



 Score =  147 bits (74), Expect = 5e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                         
Query: 357   ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
             ||||||||||||||| |||||||||||  |  ||||  |||||||||||||||| |||||
Sbjct: 9921  ttatagcggttggagctcttgctcaggaactgctgaatccacaggtctatatgccgcttg 9980

                                                                         
Query: 417   acctctaaatttcttcctccacagatacagtcctaaaaaggccgataaagacaggaaaac 476
             ||||||||||||||| ||||| | |  |||| |||||| ||||||||||| ||| |||||
Sbjct: 9981  acctctaaatttctttctccagacaatcagtactaaaagggccgataaagtcagcaaaac 10040

                                                                   
Query: 477   tactagcaaaactccaaccagtatggagacaacatgttcttgcaaccatgacct 530
              |||||||||| ||||| |||||| ||||| ||||| ||| | |||||||||||
Sbjct: 10041 aactagcaaaattccaagcagtatagagactacatgatctcggaaccatgacct 10094



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                         
Query: 545   gctgcacattccactcaagtaactgataactgccaagatgttcangcaactgaacatgat 604
             ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| || ||||
Sbjct: 10597 gctgcacattccattcaagtaactgataactgccaagattttcaggcaactggacgtgat 10656

                                       
Query: 605   gttg---cagccgataaatgataccc 627
             ||||   || ||||||||||||||||
Sbjct: 10657 gttgggtcaaccgataaatgataccc 10682
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>gb|AY110083.1| Zea mays CL7442_1 mRNA sequence
          Length = 1186

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/144 (84%), Gaps = 6/144 (4%)
 Strand = Plus / Plus

                                                                       
Query: 509 catgttcttgcaaccatgaccttctcgatataggttgctgcacattccactcaagtaact 568
           |||||||||| |||||||||||||| || | |||  |||||||||||||||| || || |
Sbjct: 526 catgttcttgaaaccatgaccttcttgaca-agg--gctgcacattccactcgagcaatt 582

                                                                       
Query: 569 gataactgccaagatgttcangcaactgaacatgatgttg---cagccgataaatgatac 625
           ||||| ||||||||| |||| |||||||||||||||| ||    | |||||| |||||||
Sbjct: 583 gataattgccaagattttcaggcaactgaacatgatgctgagttaaccgatagatgatac 642

                                   
Query: 626 ccattgctgttgcattagacatag 649
           |||| |||||||| || |||||||
Sbjct: 643 ccatcgctgttgcgttggacatag 666



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 78/88 (88%), Gaps = 5/88 (5%)
 Strand = Plus / Plus

                                                                       
Query: 70  ttaatctacattacatgaacaaaaccttcttctactgtaagcctcaagag-ggagccctt 128
           ||||||||||||||||||||| |||   |||||||||||||| | ||||| ||||| |||
Sbjct: 103 ttaatctacattacatgaacagaac---cttctactgtaagcat-aagagaggagctctt 158

                                       
Query: 129 gatctgaatcgctagatagtttatgaac 156
           |||||||||| ||||| |||||||||||
Sbjct: 159 gatctgaatcactagacagtttatgaac 186



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 357 ttatagcggttggagttcttgctcaggccccactgagcccacaggtctatatgcagcttg 416
           |||||| || |||||||||||||| ||  |||||||  | |||||||| || |||| |||
Sbjct: 374 ttatagtggctggagttcttgctcgggaaccactgaatcaacaggtctgtaggcagtttg 433

                    
Query: 417 acctctaaa 425
           ||| |||||
Sbjct: 434 accactaaa 442



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 8  cttatcaaatagatattaca 27
          ||||||||||||||||||||
Sbjct: 39 cttatcaaatagatattaca 58
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>gb|AY395816.1| Lonchophylla handleyi 12S ribosomal RNA gene, partial sequence;
            tRNA-Val gene, complete sequence; and 16S ribosomal RNA
            gene, partial sequence; mitochondrial
          Length = 2612

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tgtaagctagatgctttgtgtt 227
            ||||||||||||||||||||||
Sbjct: 1009 tgtaagctagatgctttgtgtt 988
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>gb|AF345922.1| Furipterus horrens strain ROM100202 12S ribosomal RNA gene, complete
            sequence; tRNA-Val gene, complete sequence; and 16S
            ribosomal RNA gene, complete sequence; mitochondrial
            genes for mitochondrial products
          Length = 2616

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tgtaagctagatgctttgtgtt 227
            ||||||||||||||||||||||
Sbjct: 1018 tgtaagctagatgctttgtgtt 997
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>gb|AF263233.1| Thyroptera tricolor 12S ribosomal RNA gene, complete sequence;
            tRNA-Val gene, complete sequence; and 16S ribosomal RNA
            gene, complete sequence; mitochondrial genes for
            mitochondrial products
          Length = 2608

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tgtaagctagatgctttgtgtt 227
            ||||||||||||||||||||||
Sbjct: 1009 tgtaagctagatgctttgtgtt 988
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>gb|AF411542.1|AF411542 Phylloderma stenops 12S ribosomal RNA gene, complete sequence;
            tRNA-Val gene, complete sequence; and 16S ribosomal RNA
            gene, complete sequence; mitochondrial genes for
            mitochondrial products
          Length = 2620

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tgtaagctagatgctttgtgtt 227
            ||||||||||||||||||||||
Sbjct: 1008 tgtaagctagatgctttgtgtt 987
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>gb|AF411541.1|AF411541 Phyllostomus hastatus 12S ribosomal RNA gene, complete sequence;
            tRNA-Val gene, complete sequence; and 16S ribosomal RNA
            gene, complete sequence; mitochondrial genes for
            mitochondrial products
          Length = 2602

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tgtaagctagatgctttgtgtt 227
            ||||||||||||||||||||||
Sbjct: 1001 tgtaagctagatgctttgtgtt 980
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>gb|AC110735.6| Mus musculus chromosome 1, clone RP24-123P22, complete sequence
          Length = 187303

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 426   tttcttcctccacagatacag 446
             |||||||||||||||||||||
Sbjct: 18474 tttcttcctccacagatacag 18454
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>ref|XM_763902.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_180_12159_15251)
            partial mRNA
          Length = 3093

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 491  caaccagtatggagacaacat 511
            |||||||||||||||||||||
Sbjct: 2068 caaccagtatggagacaacat 2048
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>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence
          Length = 194718

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   tttgaaccaacaagtcatgta 190
             |||||||||||||||||||||
Sbjct: 62818 tttgaaccaacaagtcatgta 62838
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>dbj|AK036462.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830113A13 product:unclassifiable, full
            insert sequence
          Length = 4150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 481  agcaaaactccaaccagtatggaga 505
            ||||||||||||| |||||||||||
Sbjct: 2936 agcaaaactccaaacagtatggaga 2912
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>emb|AL928927.10| Zebrafish DNA sequence from clone CH211-113H16, complete sequence
          Length = 168805

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 484    aaaactccaaccagtatggagacaa 508
              |||||||||||||||||| ||||||
Sbjct: 132203 aaaactccaaccagtatgaagacaa 132227
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>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence
          Length = 194931

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 481   agcaaaactccaaccagtatggaga 505
             ||||||||||||| |||||||||||
Sbjct: 21761 agcaaaactccaaacagtatggaga 21785
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>gb|AC125212.3| Mus musculus BAC clone RP23-131D6 from chromosome 5, complete sequence
          Length = 215413

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 481    agcaaaactccaaccagtatggaga 505
              ||||||||||||| |||||||||||
Sbjct: 198844 agcaaaactccaaacagtatggaga 198868
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>gb|AY823670.1| Mus musculus 2010007H12Rik (2010007H12Rik), BIPL1 (Bipl1), ZCWPW1
             (Zcwpw1), and PILRA (Pilra) genes, complete cds; PILRP5
             (Pilrp5) pseudogene, complete sequence; PILRB (Pilrb)
             gene, complete cds; PILRP4 (Pilrp4) pseudogene, complete
             sequence; PILRB2 (Pilrb2) gene, complete cds; PILRP3
             (Pilrp3), PILRP2 (Pilrp2), and PILRP1 (Pilrp1)
             pseudogenes, complete sequence; and CYP3A13 (Cyp3a13) and
             GJE1 (Gje1) genes, complete cds
          Length = 194414

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 481   agcaaaactccaaccagtatggaga 505
             ||||||||||||| |||||||||||
Sbjct: 91245 agcaaaactccaaacagtatggaga 91221
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>gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 map 5, complete sequence
          Length = 203821

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 481   agcaaaactccaaccagtatggaga 505
             ||||||||||||| |||||||||||
Sbjct: 49449 agcaaaactccaaacagtatggaga 49473
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>gb|AC166289.4| Mus musculus chromosome 7, clone RP24-132A16, complete sequence
          Length = 172931

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctatttaatctacattacat 85
             ||||||||||||||||||||
Sbjct: 91424 ctatttaatctacattacat 91443
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>ref|XM_424759.1| PREDICTED: Gallus gallus similar to 3-phosphatidylinositol kinase
           (EC 2.7.1.-) 85K chain alpha - bovine (LOC427171), mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 gctttgtgttacatacaaag 237
           ||||||||||||||||||||
Sbjct: 891 gctttgtgttacatacaaag 872
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>gb|AY395805.1| Artibeus obscurus 12S ribosomal RNA gene, partial sequence; tRNA-Val
            gene, complete sequence; and 16S ribosomal RNA gene,
            partial sequence; mitochondrial
          Length = 2600

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  tgtaagctagatgctttgtg 225
            ||||||||||||||||||||
Sbjct: 1006 tgtaagctagatgctttgtg 987
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>gb|AC101762.7| Mus musculus chromosome 7, clone RP24-315G8, complete sequence
          Length = 185445

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctatttaatctacattacat 85
             ||||||||||||||||||||
Sbjct: 96644 ctatttaatctacattacat 96663
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>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence
          Length = 192348

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   gctcaggccccactgagccc 396
             ||||||||||||||||||||
Sbjct: 31874 gctcaggccccactgagccc 31855
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>emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11
          Length = 317050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    caacatgttcttgcaaccat 525
              ||||||||||||||||||||
Sbjct: 183737 caacatgttcttgcaaccat 183718
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>emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 map 22q22.2-q22.3,
             complete sequence
          Length = 195913

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gaactaattctctaagtttt 172
             ||||||||||||||||||||
Sbjct: 32182 gaactaattctctaagtttt 32163
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>emb|AL954235.1| Pan troglodytes chromosome 22 clone RP43-030A20 map 22q22.2-q22.3,
              complete sequence
          Length = 169458

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gaactaattctctaagtttt 172
              ||||||||||||||||||||
Sbjct: 131695 gaactaattctctaagtttt 131676
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>gb|AF263226.1| Artibeus jamaicensis isolate TK267999 12S ribosomal RNA gene,
            complete sequence; tRNA-Val gene, complete sequence; and
            16S ribosomal RNA gene, complete sequence; mitochondrial
            genes for mitochondrial products
          Length = 2604

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  tgtaagctagatgctttgtg 225
            ||||||||||||||||||||
Sbjct: 1007 tgtaagctagatgctttgtg 988
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>gb|AF263225.1| Artibeus jamaicensis isolate TK267998 12S ribosomal RNA gene,
            complete sequence; tRNA-Val gene, complete sequence; and
            16S ribosomal RNA gene, complete sequence; mitochondrial
            genes for mitochondrial products
          Length = 2603

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  tgtaagctagatgctttgtg 225
            ||||||||||||||||||||
Sbjct: 1006 tgtaagctagatgctttgtg 987
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>gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, complete sequence
          Length = 151265

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   agcaaaactccaaccagtatggag 504
             |||||||||||||||||| |||||
Sbjct: 98904 agcaaaactccaaccagtgtggag 98881
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>dbj|AK012876.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810037O22
           product:unclassifiable, full insert sequence
          Length = 2211

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 gctcaggccccactgagccc 396
           ||||||||||||||||||||
Sbjct: 457 gctcaggccccactgagccc 438
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>gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X, complete sequence
          Length = 180322

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    tttatgaactaattctctaa 167
              ||||||||||||||||||||
Sbjct: 147543 tttatgaactaattctctaa 147562
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>gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, complete sequence
          Length = 190728

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 288   acatagtagtatctctaccaaagaatta 315
             |||||||||||| |||||| ||||||||
Sbjct: 31645 acatagtagtatttctacccaagaatta 31672
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>gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complete sequence
          Length = 82938

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   atgctttgtgttacatacaa 235
             ||||||||||||||||||||
Sbjct: 10529 atgctttgtgttacatacaa 10548
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>gb|AC007842.1|AC007842 Homo sapiens chromosome 19, BAC 331191 (CIT-B-471f3), complete sequence
          Length = 174009

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tatctctaccaaagaattac 316
             ||||||||||||||||||||
Sbjct: 74961 tatctctaccaaagaattac 74980
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>gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
          Length = 252394

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    gctcaggccccactgagccc 396
              ||||||||||||||||||||
Sbjct: 178737 gctcaggccccactgagccc 178718


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,853,558
Number of Sequences: 3902068
Number of extensions: 5853558
Number of successful extensions: 107168
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107031
Number of HSP's gapped (non-prelim): 111
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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