ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37m02 |
|---|---|
| Clone Library Name | barley_pub |
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 42.4 bits (98), Expect = 0.001 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YGEGY D D+R P++ + K L W PKT ++ L + + Sbjct: 607 YYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKIINF 647
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 +F E DD KR PD+ LGW P PL++ L + Y K + Q Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 +F E DD KR PD+ LGW P PL++ L + Y K + Q Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 +F E DD KR PD+ LGW P PL++ L + Y K + Q Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 +F E DD KR PD+ LGW P PL++ L + Y K + Q Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 37.7 bits (86), Expect = 0.026 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D R P + + LGW P ++D +E TL + Sbjct: 608 YYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 37.7 bits (86), Expect = 0.026 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D R P + + LGW P ++D +E TL + Sbjct: 608 YYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 F E DD +R PD+ LGW P PL++ L T+ Y K + Q Sbjct: 351 FLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQANNQ 403
>ARNA_PSEU2 (Q4ZSZ2) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 664 Score = 36.6 bits (83), Expect = 0.059 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 FYG+GY D R P + K +GW P L + + TL + Sbjct: 611 FYGKGYQDVSHRTPSIDNAKKLIGWTPGIELSETIGKTLDF 651
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 36.6 bits (83), Expect = 0.059 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 445 +F E DD +R PD+ LGW P PL++ L T+ Y + + Q Sbjct: 347 QFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSRELEHQANNQ 400
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 36.6 bits (83), Expect = 0.059 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKT 469 +YG+GY D + R P + ++ L W PK +++ ++ TL + +T Sbjct: 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 36.6 bits (83), Expect = 0.059 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKT 469 +YG+GY D + R P + ++ L W PK +++ ++ TL + +T Sbjct: 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 36.2 bits (82), Expect = 0.077 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKT 469 +YG+GY D + R P + + L W PK +++ ++ TL + +T Sbjct: 608 YYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFLRT 652
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.4 bits (80), Expect = 0.13 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKT 469 +YG+GY D + R P + + L W PK +++ ++ TL + +T Sbjct: 608 YYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQETIDETLDFFLRT 652
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D R P + + L W P ++D +E TL + Sbjct: 608 YYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D R P + + L W P ++D +E TL + Sbjct: 608 YYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 34.3 bits (77), Expect = 0.29 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 FYG+GY D R P + + +GW P L + + TL + Sbjct: 610 FYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDF 650
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 33.9 bits (76), Expect = 0.38 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D + R P + + L W P +K + TL + Sbjct: 608 YYGKGYQDVEHRKPSIKNAERLLDWKPTIDMKQTINETLDF 648
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 33.9 bits (76), Expect = 0.38 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLT-YQHKTYKE 460 FYG+GY D R P + + L W P L++ + TL + H+ +E Sbjct: 609 FYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALRE 657
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 33.5 bits (75), Expect = 0.50 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 FYG GY D + R P + + L W P + + + TL + Sbjct: 610 FYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSETIGNTLDF 650
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 32.7 bits (73), Expect = 0.85 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKT 469 +YG+GY D R P + + L W P ++ + TL Y +T Sbjct: 615 YYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 659
>ARNA_YERPS (Q93PD8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 32.0 bits (71), Expect = 1.4 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D + R P + + L W P+ ++ + TL + Sbjct: 608 YYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDF 648
>ARNA_YERPE (Q8ZDX8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 32.0 bits (71), Expect = 1.4 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 603 FYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTY 481 +YG+GY D + R P + + L W P+ ++ + TL + Sbjct: 608 YYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDF 648
>GNL1_PANTR (Q7YR35) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein HSR1) Length = 430 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 7/51 (13%) Frame = -2 Query: 508 GPAGDDSDLPAQDLQGSCQ-------DADVSGHGDAVKLDDDGTSASATAL 377 GPAGD+ + ++L SC+ DAD G GD ++ TSA ++L Sbjct: 370 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGD----EETPTSAPGSSL 416
>GNL1_HUMAN (P36915) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein HSR1) Length = 430 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 7/51 (13%) Frame = -2 Query: 508 GPAGDDSDLPAQDLQGSCQ-------DADVSGHGDAVKLDDDGTSASATAL 377 GPAGD+ + ++L SC+ DAD G GD ++ TSA ++L Sbjct: 370 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGD----EETPTSAPGSSL 416
>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I| Length = 509 Score = 30.8 bits (68), Expect = 3.2 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Frame = -2 Query: 559 HDPDQQAARVEPQDPSQGPAGDDSDLPAQDLQGSCQDADVSGHGDAVKLDD----DGTSA 392 H+ + + P D A DD L + S ++ ++GHG VK D G A Sbjct: 163 HEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLA 222 Query: 391 SATA--LLIFWKPDTDVIV 341 S + L+ FW P T + Sbjct: 223 SGSKDNLVKFWDPRTGTCI 241
>SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)| Length = 1695 Score = 30.0 bits (66), Expect = 5.5 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -2 Query: 571 EDPRHDPDQQAARVEPQ----DPSQGPAGDDSDLPAQDLQGSCQDADVSG 434 E P +PD+QA V+ PS+GPA ++ P +DL + D G Sbjct: 704 ETPDEEPDEQAEVVDTDMAAAAPSEGPAPLEASAPLEDLVAIDKRGDAMG 753
>GNL1_MOUSE (P36916) Guanine nucleotide-binding protein-like 1 (GTP-binding| protein MMR1) Length = 430 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%) Frame = -2 Query: 508 GPAGDDSDLPAQDLQGSCQ-------DADVSGHGDAVKLDDDGTSASATAL 377 GPAGD+ + ++L SC+ DAD G GD +D TS + L Sbjct: 370 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGD----EDTPTSDPGSCL 416
>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)| (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12) Length = 1290 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 574 QEDPRHDPDQQAARVEPQDPSQGPAGDDSDLPAQDLQ 464 Q+ PR P P D S+ PAG +DLP D Q Sbjct: 864 QQHPRQPP--------PSDSSESPAGQKADLPCHDPQ 892
>Y277_MYCGE (Q49409) Hypothetical protein MG277| Length = 970 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -2 Query: 496 DDSDLPAQDLQGSCQDADVSGHGDAVKLDDDGTSASATALLIFWK 362 + +L + D A V G+G K + +GTS+S L+ WK Sbjct: 237 NSKNLSSSDYNTGNGQASVEGNGKFFKQNANGTSSSGNKTLVLWK 281
>COA1_POVBK (P03088) Coat protein VP1| Length = 362 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 Query: 191 NVTNTATTGMIDTQILGPFC 250 +VTNTATT ++D Q +GP C Sbjct: 236 HVTNTATTVLLDEQGVGPLC 255
>COA1_POVBA (P14996) Coat protein VP1| Length = 362 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 Query: 191 NVTNTATTGMIDTQILGPFC 250 +VTNTATT ++D Q +GP C Sbjct: 236 HVTNTATTVLLDEQGVGPLC 255
>COA1_SV40 (P03087) Coat protein VP1| Length = 364 Score = 29.3 bits (64), Expect = 9.4 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 191 NVTNTATTGMIDTQILGPFC 250 ++TNTATT ++D Q +GP C Sbjct: 238 HITNTATTVLLDEQGVGPLC 257
>SN114_YEAST (P36048) 114 kDa U5 small nuclear ribonucleoprotein component| (GIN10 protein) Length = 1008 Score = 29.3 bits (64), Expect = 9.4 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -3 Query: 582 DSDKRIPDMTLINKQLGWNPKTPLKDL 502 DS KRIPDM+ N +LGW P L +L Sbjct: 156 DSHKRIPDMSK-NVELGWKPLRYLDNL 181
>PPME1_CRYNE (Q5KBD8) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 422 Score = 29.3 bits (64), Expect = 9.4 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -2 Query: 493 DSDLPAQDLQGSCQDADVSGHGDAVKLDDDGTSASATALLIFWKPDTDVIVKPP 332 D +L +QG Q +S G L +D + A L+ FW +T V+V PP Sbjct: 349 DRELMVGQMQGKFQLEVMSDVGHY--LHEDNPAGLAATLITFWHRNTRVLVLPP 400 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,790,141 Number of Sequences: 219361 Number of extensions: 1585028 Number of successful extensions: 4755 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4565 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4750 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
