ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37m02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full ... 357 3e-95
2gb|AY103666.1| Zea mays PCO119463 mRNA sequence 161 3e-36
3gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, compl... 159 1e-35
4ref|NM_189435.1| Oryza sativa (japonica cultivar-group), predic... 119 1e-23
5dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
6gb|BT016798.1| Zea mays clone Contig631 mRNA sequence 88 4e-14
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
8dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
9gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incom... 68 4e-08
10gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence 62 2e-06
11gb|AY391715.1| Nicotiana benthamiana UDP-D-apiose/UDP-D-xylose s... 56 1e-04
12gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAX... 54 6e-04
13ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-X... 48 0.034
14gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G278... 48 0.034
15gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose sy... 48 0.034
16gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 48 0.034
17gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 ma... 48 0.034
18gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 48 0.034
19gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete s... 48 0.034
20gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27... 48 0.034
21gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete se... 46 0.13
22emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 46 0.13
23ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ prot... 42 2.1
24gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, com... 42 2.1
25gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, c... 42 2.1
26ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM002... 42 2.1
27gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map... 42 2.1
28gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, compl... 42 2.1
29gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, comple... 42 2.1
30emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Co... 42 2.1
31emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Co... 42 2.1
32gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosom... 42 2.1
33gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L... 42 2.1
34dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, ... 42 2.1
35gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, comple... 42 2.1
36gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.3
37gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gen... 40 8.3
38ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.3
39ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.3
40gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, co... 40 8.3
41gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198)... 40 8.3
42gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 8.3
43ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.3
44ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.3
45ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.3
46ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.3
47gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudoge... 40 8.3
48gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, comp... 40 8.3
49gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, com... 40 8.3
50gb|AC091867.3| Homo sapiens chromosome 5 clone CTD-2365E22, comp... 40 8.3
51gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.3
52gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, co... 40 8.3
53ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198... 40 8.3
54dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
55gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, com... 40 8.3
56dbj|AK120975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
57gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete... 40 8.3
58dbj|D10759.1|UUKLRNAP Uukuniemi virus L RNA segment for RNA poly... 40 8.3 
>gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full insert mRNA
           sequence
          Length = 692

 Score =  357 bits (180), Expect = 3e-95
 Identities = 201/208 (96%)
 Strand = Plus / Minus

                                                                       
Query: 401 gccgtcgtcgtctagcttgacggcgtcgccgtggccagacacatctgcgtcttgacagct 460
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 475 gccgtcatcgtctagcttgaaggcgtcgccgtggccagacacatctgcgtcttcacagcc 416

                                                                       
Query: 461 tccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagaggggtc 520
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 415 tccttgtaggtcttgtgctggtaggtcagcgtcgtctccagcaggtccttgagaggggtc 356

                                                                       
Query: 521 ttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtcactg 580
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 355 ttggggttccaccctagctgcttgttgatcagggtcatgtcagggatcctcttgtcgctg 296

                                       
Query: 581 tcgtcgtacccttcgccgtagaattctt 608
           ||||||||||||||||||||||||||||
Sbjct: 295 tcgtcgtacccttcgccgtagaattctt 268



 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/187 (86%), Gaps = 11/187 (5%)
 Strand = Plus / Minus

                                                                       
Query: 195 taacaaacactgccaccacaggtatgatagatactcagatactcggtcccttttgcccga 254
           ||||||||||||||||||||||||| |||||||||||| |        || ||||||| |
Sbjct: 665 taacaaacactgccaccacaggtataatagatactcagtt--------ccctttgcccaa 614

                                                                       
Query: 255 tatagggttacacaacgacgaatctaggtaagataaga-gatgggtgg-tgggatctaga 312
           ||||||||||||||| |||||||||||||| | ||||| ||||||||| || ||||||||
Sbjct: 613 tatagggttacacaatgacgaatctaggtagg-taagaagatgggtgggtgtgatctaga 555

                                                                       
Query: 313 ggcgcgacaaaaacgacgacggtggtttcactatgacatccgtatccggcttccaaaaga 372
           |||||||||||||||||||||  |||||||||| || ||  ||||| |||||||||||||
Sbjct: 554 ggcgcgacaaaaacgacgacgacggtttcactacgatataagtatctggcttccaaaaga 495

                  
Query: 373 tcaagag 379
           |||||||
Sbjct: 494 tcaagag 488
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>gb|AY103666.1| Zea mays PCO119463 mRNA sequence
          Length = 1518

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                        
Query: 455  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 514
            |||||||| ||||| ||||||||||| || ||||| || ||||||||||| |||||||||
Sbjct: 1054 acagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgaga 995

                                                                        
Query: 515  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 574
            || ||||| |||||||| ||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 994  ggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttg 935

                                         
Query: 575  tcactgtcgtcgtacccttcgccgtagaa 603
            || || || ||||| ||||||||||||||
Sbjct: 934  tcgctatcatcgtatccttcgccgtagaa 906
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>gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, complete cds
          Length = 1505

 Score =  159 bits (80), Expect = 1e-35
 Identities = 131/148 (88%)
 Strand = Plus / Minus

                                                                        
Query: 456  cagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagag 515
            ||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 1278 cagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgagag 1219

                                                                        
Query: 516  gggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgt 575
            | ||||| |||||||| ||||||||||||||||| |  ||||||||||||||||||||||
Sbjct: 1218 gcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgt 1159

                                        
Query: 576  cactgtcgtcgtacccttcgccgtagaa 603
            | || || ||||| ||||||||||||||
Sbjct: 1158 cgctatcatcgtatccttcgccgtagaa 1131
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>ref|NM_189435.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                        
Query: 452  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 511
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1163 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1104

                                                                        
Query: 512  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 571
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1103 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1044

                    
Query: 572  ttgtcact 579
            || |||||
Sbjct: 1043 ttatcact 1036
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>dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063F13, full
            insert sequence
          Length = 1823

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                        
Query: 452  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 511
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1331 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1272

                                                                        
Query: 512  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 571
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1271 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1212

                    
Query: 572  ttgtcact 579
            || |||||
Sbjct: 1211 ttatcact 1204
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>gb|BT016798.1| Zea mays clone Contig631 mRNA sequence
          Length = 1534

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                        
Query: 455  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 514
            |||||||| ||| | | |||| |||| || ||||| || ||||||||||| |||||||||
Sbjct: 1160 acagcttctttggatggcttgggctgatacgtcagcgttgtctccagcagatccttgaga 1101

                                                                        
Query: 515  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 574
            |||||||| ||| |||| |||||||| ||| |||| |  |||||| ||||||||||||||
Sbjct: 1100 ggggtctttggggtccaacctagctggttggtgattatagtcatggcggggatcctcttg 1041
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 452      ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 511
                |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 42731615 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 42731674

                                          
Query: 512      agaggggtcttggggttccaccctag 537
                ||||||||||| || ||||| |||||
Sbjct: 42731675 agaggggtcttcggattccaacctag 42731700



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 536      agctgcttgttgatcagggtcatgtcggggatcctcttgtcact 579
                |||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 42731793 agctgcttgttgattatggtcatgtcaggaatcctcttatcact 42731836



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 16       tgaatgaagctcactaacca 35
                ||||||||||||||||||||
Sbjct: 36753549 tgaatgaagctcactaacca 36753530
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 452   ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 511
             |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 64380 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 64439

                                       
Query: 512   agaggggtcttggggttccaccctag 537
             ||||||||||| || ||||| |||||
Sbjct: 64440 agaggggtcttcggattccaacctag 64465



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 536   agctgcttgttgatcagggtcatgtcggggatcctcttgtcact 579
             |||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 64558 agctgcttgttgattatggtcatgtcaggaatcctcttatcact 64601
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>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR4
          Length = 87724

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 543   tgttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtaga 602
             ||||||| | ||||||||| || || |||||||||||||| || ||||| ||||||||||
Sbjct: 14313 tgttgattatggtcatgtctggaattctcttgtcactgtcatcatacccctcgccgtaga 14254

                   
Query: 603   attctt 608
             ||||||
Sbjct: 14253 attctt 14248
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>gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence
          Length = 1541

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 518  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 577
            ||||| |||||||| || |||||  ||||||| | ||||||||| || |||| |||||||
Sbjct: 1124 gtctttgggttccaaccgagctgtctgttgattatggtcatgtctggaatccgcttgtca 1065

                                           
Query: 578  ctgtcgtcgtacccttcgccgtagaattctt 608
            ||||| || ||||| ||||| || |||||||
Sbjct: 1064 ctgtcatcatacccctcgccataaaattctt 1034
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>gb|AY391715.1| Nicotiana benthamiana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
            complete cds
          Length = 1164

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattctt 608
            ||||||||| || || | |||||||||||| |||||||| |||||||| |||||||
Sbjct: 1032 ggtcatgtctggaattcgcttgtcactgtcatcgtacccctcgccgtaaaattctt 977
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>gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAXs) mRNA, complete
            cds
          Length = 1375

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 518  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 577
            ||||| |||||||| || |||||  ||||||| | ||||||||| || || | |||||||
Sbjct: 1105 gtctttgggttccaaccaagctgtctgttgattatggtcatgtctggaattcgcttgtca 1046

                                           
Query: 578  ctgtcgtcgtacccttcgccgtagaattctt 608
            ||||| || ||||| ||||| || |||||||
Sbjct: 1045 ctgtcatcatacccctcgccataaaattctt 1015
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>ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1)
            AT2G27860 (AXS1) mRNA, complete cds
          Length = 1516

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1093 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 1046
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>gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G27860 mRNA, complete
            cds
          Length = 1514

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1102 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 1055
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>gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
            complete cds
          Length = 1170

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 991
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>gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1170

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 991
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>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
             sequence
          Length = 118196

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 553   ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
             ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 14770 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 14723
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>gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1386

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1090 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 1043
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>gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete sequence
          Length = 1496

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1096 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 1049
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>gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27860) mRNA, complete
            cds
          Length = 1170

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgta 600
            ||||||||| ||||| |||||||||||||| || || ||||| |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgta 991
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>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence
          Length = 115175

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 74/91 (81%)
 Strand = Plus / Minus

                                                                         
Query: 518   gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 577
             ||||| || ||||| || |||||||||||||| | |||||| || || || |||||||||
Sbjct: 13412 gtcttcggattccatccaagctgcttgttgatgatggtcatatcaggaattctcttgtca 13353

                                            
Query: 578   ctgtcgtcgtacccttcgccgtagaattctt 608
             || || || || || || ||||| |||||||
Sbjct: 13352 ctatcatcatatccctcaccgtaaaattctt 13322
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 142    ctctctcttactaacagcaaaag 164
              |||||||||||||||||||||||
Sbjct: 613235 ctctctcttactaacagcaaaag 613257
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>ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine
            kinase AT2G42290 mRNA, complete cds
          Length = 2213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 318  gacaaaaacgacgacggtggtttca 342
            |||||| ||||||||||||||||||
Sbjct: 1051 gacaaagacgacgacggtggtttca 1075
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>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence
          Length = 182465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 286  gataagagatgggtggtggga 306
            |||||||||||||||||||||
Sbjct: 4675 gataagagatgggtggtggga 4695
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>gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, complete sequence
          Length = 149726

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   gataagagatgggtggtggga 306
             |||||||||||||||||||||
Sbjct: 35520 gataagagatgggtggtggga 35500
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>ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM00220.1) partial mRNA
          Length = 531

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 562 ggggatcctcttgtcactgtc 582
           |||||||||||||||||||||
Sbjct: 278 ggggatcctcttgtcactgtc 258
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>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete
            sequence
          Length = 85835

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 318  gacaaaaacgacgacggtggtttca 342
            |||||| ||||||||||||||||||
Sbjct: 1799 gacaaagacgacgacggtggtttca 1775
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>gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, complete sequence
          Length = 157061

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   gtctccagcaggtccttgaga 514
             |||||||||||||||||||||
Sbjct: 52428 gtctccagcaggtccttgaga 52448
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>gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, complete sequence
          Length = 159922

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 494    gtctccagcaggtccttgaga 514
              |||||||||||||||||||||
Sbjct: 148418 gtctccagcaggtccttgaga 148438
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>emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZG12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1580

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 318 gacaaaaacgacgacggtggtttca 342
           |||||| ||||||||||||||||||
Sbjct: 418 gacaaagacgacgacggtggtttca 442
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>emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1588

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 318 gacaaaaacgacgacggtggtttca 342
           |||||| ||||||||||||||||||
Sbjct: 468 gacaaagacgacgacggtggtttca 492
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>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete
             sequence
          Length = 211214

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   gataagagatgggtggtggga 306
             |||||||||||||||||||||
Sbjct: 11608 gataagagatgggtggtggga 11588
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>gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L7, complete sequence
          Length = 98070

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   gtctccagcaggtccttgaga 514
             |||||||||||||||||||||
Sbjct: 65684 gtctccagcaggtccttgaga 65704
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>dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, map 22, complete
              sequences
          Length = 231583

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 464    ttgtaggtcttgtgctggtaggtca 488
              |||||||| ||||||||||||||||
Sbjct: 154461 ttgtaggttttgtgctggtaggtca 154437
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>gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, complete sequence
          Length = 184760

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 363    ttccaaaagatcaagagggcc 383
              |||||||||||||||||||||
Sbjct: 142718 ttccaaaagatcaagagggcc 142738
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 491    gtcgtctccagcaggtcctt 510
              ||||||||||||||||||||
Sbjct: 379067 gtcgtctccagcaggtcctt 379086
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>gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gene, complete cds
          Length = 4747

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  aagagggccgtggccgaggc 394
            ||||||||||||||||||||
Sbjct: 1909 aagagggccgtggccgaggc 1928
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>ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU00221.1) partial mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  caaaaacgacgacggtggtt 339
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (NCU00221.1) partial
            mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  caaaaacgacgacggtggtt 339
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   aacaaacactgccaccacag 215
             ||||||||||||||||||||
Sbjct: 45759 aacaaacactgccaccacag 45778
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>gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198) gene, complete
           cds
          Length = 921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 aacaaacactgccaccacag 215
           ||||||||||||||||||||
Sbjct: 39  aacaaacactgccaccacag 20
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>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    aacaaacactgccaccacag 215
              ||||||||||||||||||||
Sbjct: 213585 aacaaacactgccaccacag 213604
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>ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02129.1)
            partial mRNA
          Length = 5295

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 541  cttgttgatcagggtcatgt 560
            ||||||||||||||||||||
Sbjct: 4032 cttgttgatcagggtcatgt 4013
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>ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01260) partial mRNA
          Length = 2108

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 491 gtcgtctccagcaggtcctt 510
           ||||||||||||||||||||
Sbjct: 231 gtcgtctccagcaggtcctt 212
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>ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508567.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  aacaaacactgccaccacag 215
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507649.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  aacaaacactgccaccacag 215
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudogene, partial
           sequence
          Length = 919

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 aacaaacactgccaccacag 215
           ||||||||||||||||||||
Sbjct: 39  aacaaacactgccaccacag 20
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>gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, complete sequence
          Length = 109953

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     taaaactcaacatcaactac 69
              ||||||||||||||||||||
Sbjct: 107425 taaaactcaacatcaactac 107444
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>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence
          Length = 163976

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 540    gcttgttgatcagggtcatg 559
              ||||||||||||||||||||
Sbjct: 108105 gcttgttgatcagggtcatg 108124
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>gb|AC091867.3| Homo sapiens chromosome 5 clone CTD-2365E22, complete sequence
          Length = 98183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    taaaactcaacatcaactac 69
             ||||||||||||||||||||
Sbjct: 68542 taaaactcaacatcaactac 68523
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 381     gccgtggccgaggcagacgtgccg 404
               ||||||||||| ||||||||||||
Sbjct: 3987345 gccgtggccgatgcagacgtgccg 3987322
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>gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, complete sequence
          Length = 204942

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    tgtaggtcttgtgctggtag 484
              ||||||||||||||||||||
Sbjct: 107798 tgtaggtcttgtgctggtag 107817
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>ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198), mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 aacaaacactgccaccacag 215
           ||||||||||||||||||||
Sbjct: 39  aacaaacactgccaccacag 20
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tgaatgaagctcactaacca 35
             ||||||||||||||||||||
Sbjct: 79864 tgaatgaagctcactaacca 79845
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>gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, complete sequence
          Length = 209668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    tgtaggtcttgtgctggtag 484
              ||||||||||||||||||||
Sbjct: 179379 tgtaggtcttgtgctggtag 179360
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>dbj|AK120975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041K02, full
            insert sequence
          Length = 5459

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   tgaatgaagctcactaacca 35
            ||||||||||||||||||||
Sbjct: 3194 tgaatgaagctcactaacca 3175
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>gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete cds
          Length = 2122

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 aagagggccgtggccgaggc 394
           ||||||||||||||||||||
Sbjct: 497 aagagggccgtggccgaggc 516
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>dbj|D10759.1|UUKLRNAP Uukuniemi virus L RNA segment for RNA polymerase, complete cds
          Length = 6423

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  caagaacatatatctctctc 148
            ||||||||||||||||||||
Sbjct: 2819 caagaacatatatctctctc 2800


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,714,476
Number of Sequences: 3902068
Number of extensions: 4714476
Number of successful extensions: 89420
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89224
Number of HSP's gapped (non-prelim): 195
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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