| Clone Name | rbags38a24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... | 94 | 6e-19 | 2 | EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... | 84 | 4e-16 | 3 | APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... | 45 | 3e-04 | 4 | YPP3_CAEEL (P52716) Putative serine carboxypeptidase F32A5.3 pre... | 30 | 9.8 | 5 | POLS_EEVVE (P36330) Structural polyprotein (p130) [Contains: Cap... | 30 | 9.8 |
|---|
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 93.6 bits (231), Expect = 6e-19 Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 9/121 (7%) Frame = -2 Query: 679 DLDEHGCIAKFNNAAKRFNTLLSETCDDLRLLLKKSSIIFVDMFAIKYDLVANHTKHGIE 500 D D HGC++ N+ A++FN L + +LR L +++I +VD++++K++L + HG + Sbjct: 238 DFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFK 297 Query: 499 KPLMTCCGHGGPPYNYDP------KRSCMGSDMDL---CKLGDKFISWDGVHFTDAANSI 347 L++CCGHGG YNY+ K+ G ++ + C DK + WDGVHFT AAN Sbjct: 298 GSLVSCCGHGG-KYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKF 356 Query: 346 V 344 + Sbjct: 357 I 357
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 84.0 bits (206), Expect = 4e-16 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 9/135 (6%) Frame = -2 Query: 673 DEHGCIAKFNNAAKRFNTLLSETCDDLRLLLKKSSIIFVDMFAIKYDLVANHTKHGIEKP 494 D GC +N A+ FN L E LR L ++ + VD++++KY L + KHG E P Sbjct: 242 DSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFP 301 Query: 493 LMTCCGHGGPPYNYDPKRSC---MGSD------MDLCKLGDKFISWDGVHFTDAANSIVA 341 L+TCCG+GG YN+ C + +D + C ++WDG H+T+AAN Sbjct: 302 LITCCGYGG-KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFF 360 Query: 340 SMAIGGEYSVPRMKL 296 G +S P + L Sbjct: 361 DQISTGAFSDPPVPL 375
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/111 (24%), Positives = 46/111 (41%) Frame = -2 Query: 661 CIAKFNNAAKRFNTLLSETCDDLRLLLKKSSIIFVDMFAIKYDLVANHTKHGIEKPLMTC 482 C + N A++ FN+ L L L S+ +++D++ I ++ +G E+ C Sbjct: 419 CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPC 478 Query: 481 CGHGGPPYNYDPKRSCMGSDMDLCKLGDKFISWDGVHFTDAANSIVASMAI 329 C G C S +C ++ WDGVH T A + + I Sbjct: 479 CKTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTINKVLI 525
>YPP3_CAEEL (P52716) Putative serine carboxypeptidase F32A5.3 precursor (EC| 3.4.16.-) Length = 574 Score = 29.6 bits (65), Expect = 9.8 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 177 PNASSSEVLDNGLTVTVGFLFSSFSILCN 91 PN S+++D+G + TV F S F++L N Sbjct: 543 PNIQLSDLVDSGSSSTVAFFISMFAVLLN 571
>POLS_EEVVE (P36330) Structural polyprotein (p130) [Contains: Capsid protein (EC| 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike g Length = 1254 Score = 29.6 bits (65), Expect = 9.8 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = -2 Query: 721 CLPAKLAMPRASDGDLDEHGCIAKFNNAAKRFNTLLSET-CDDLRLLLKKSSIIFVDMFA 545 C+ L + A+ EH N A +NT+++ L + + + I + Sbjct: 797 CVVPFLVVAGAAGAGAYEHATTMP-NQAGISYNTIVNRAGYAPLPISITPTKIKLIPTVN 855 Query: 544 IKYDLVANHTKHGIEKPLMTCCGHGGPPYNYDPKRSC 434 ++Y V H K G++ P + CCG Y P C Sbjct: 856 LEY--VTCHYKTGMDSPTIKCCGSQECTPTYRPDEQC 890 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,615,245 Number of Sequences: 219361 Number of extensions: 2034007 Number of successful extensions: 6297 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6087 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6291 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7422931207 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)