ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR974461.5| Zebrafish DNA sequence from clone DKEY-21K13 in ... 46 0.058
2emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 46 0.058
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
4dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
5dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
6gb|AC146092.2| Pan troglodytes BAC clone RP43-48I3 from 7, compl... 42 0.90
7gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosom... 42 0.90
8gb|AC152064.3| Pan troglodytes BAC clone RP43-134I6 from chromos... 42 0.90
9gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, comp... 42 0.90
10gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, compl... 42 0.90
11gb|AC097061.2| Homo sapiens chromosome 1 clone RP11-415L24, comp... 42 0.90
12gb|AC093107.3| Homo sapiens chromosome 7 clone RP11-751K21, comp... 42 0.90
13gb|AC068551.6| Homo sapiens BAC clone RP11-720N12 from 2, comple... 42 0.90
14gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence 42 0.90
15gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence 42 0.90
16emb|AL833782.13| Mouse DNA sequence from clone RP23-83L24 on chr... 42 0.90
17gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, co... 42 0.90
18gb|AF043690.1|AF043690 Mus musculus Mouse mammary tumor virus cl... 42 0.90
19gb|BC109315.1| Homo sapiens BTB (POZ) domain containing 3, mRNA ... 40 3.6
20gb|BC109316.1| Homo sapiens BTB (POZ) domain containing 3, mRNA ... 40 3.6
21gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, com... 40 3.6
22ref|NM_001002964.1| Canis familiaris hepatocyte growth factor (h... 40 3.6
23gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, co... 40 3.6
24gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromo... 40 3.6
25ref|NM_181443.1| Homo sapiens BTB (POZ) domain containing 3 (BTB... 40 3.6
26ref|NM_014962.2| Homo sapiens BTB (POZ) domain containing 3 (BTB... 40 3.6
27gb|AY543632.1| Canis familiaris hepatocyte growth factor mRNA, c... 40 3.6
28ref|XM_841752.1| Trypanosoma brucei TREU927 hypothetical protein... 40 3.6
29emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chr... 40 3.6
30gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosom... 40 3.6
31gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, comple... 40 3.6
32gb|BC040835.1| Homo sapiens cDNA clone IMAGE:5301683 40 3.6
33gb|BC026168.1| Homo sapiens neural precursor cell expressed, dev... 40 3.6
34emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 i... 40 3.6
35emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on ch... 40 3.6
36emb|AL356963.17| Human DNA sequence from clone RP11-535A9 on chr... 40 3.6
37emb|AL355358.9| Human DNA sequence from clone RP11-536L15 on chr... 40 3.6
38emb|AL138847.14| Human DNA sequence from clone RP5-849H19 on chr... 40 3.6
39emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J2... 40 3.6
40emb|AJ311552.1|UFA311552 Uromyces fabae TBB1 gene for beta-tubul... 40 3.6
41emb|CR382400.1| Plasmodium falciparum chromosome 6, complete seq... 40 3.6
42emb|AL138651.1|ATT17J13 Arabidopsis thaliana DNA chromosome 3, B... 40 3.6
43emb|AL732508.13| Mouse DNA sequence from clone RP23-270A11 on ch... 40 3.6
44emb|CR860153.1| Pongo pygmaeus mRNA; cDNA DKFZp459C1423 (from cl... 40 3.6
45emb|CR407586.6| Zebrafish DNA sequence from clone CH211-283G6 in... 40 3.6
46emb|AL137756.1|HSM802398 Homo sapiens mRNA; cDNA DKFZp434B055 (f... 40 3.6
47emb|BX649505.6| Zebrafish DNA sequence from clone CH211-113M13 i... 40 3.6
48dbj|AK024349.1| Homo sapiens cDNA FLJ14287 fis, clone PLACE1006360 40 3.6
49emb|CR293505.5| Zebrafish DNA sequence from clone DKEY-76D14 in ... 40 3.6
50gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complet... 40 3.6
51gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 3.6
52gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-9... 40 3.6
53gb|AF289207.2|H010058S03 Mus musculus aspartyl beta-hydroxylase ... 40 3.6
54gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, comple... 40 3.6
55ref|NM_001009830.1| Felis catus hepatocyte growth factor (HGF), ... 40 3.6
56gb|M32672.1|HUMGPP3A07 Homo sapiens glycoprotein IIIa (ITGB3) ge... 40 3.6
57dbj|AB080187.1| Felis catus HGF mRNA for hepatocyte growth facto... 40 3.6
58dbj|AB023169.1| Homo sapiens mRNA for KIAA0952 protein, partial cds 40 3.6
59gb|AC013417.4|AC013417 Homo sapiens 12q22-103.4-106.5 BAC RP11-3... 40 3.6
60emb|AL832468.1|HSM803776 Homo sapiens mRNA; cDNA DKFZp313A0321 (... 40 3.6
61emb|AL832466.1|HSM803774 Homo sapiens mRNA; cDNA DKFZp313N211 (f... 40 3.6
62emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chr... 40 3.6
63emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-1... 40 3.6 
>emb|CR974461.5| Zebrafish DNA sequence from clone DKEY-21K13 in linkage group 1,
            complete sequence
          Length = 27844

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 66   ttgctatacaaaataacactgacaaaggtct 96
            |||||||| |||||||||| |||||||||||
Sbjct: 5301 ttgctataaaaaataacacagacaaaggtct 5271
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 179     gaaatggaaaaagaaaatagaaa 201
               |||||||||||||||||||||||
Sbjct: 1786169 gaaatggaaaaagaaaatagaaa 1786147
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 185      gaaaaagaaaatagaaatttaggggg 210
                ||||||||||| ||||||||||||||
Sbjct: 25599757 gaaaaagaaaagagaaatttaggggg 25599782
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004A09
          Length = 158826

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 185   gaaaaagaaaatagaaatttaggggg 210
             ||||||||||| ||||||||||||||
Sbjct: 46563 gaaaaagaaaagagaaatttaggggg 46588
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>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696E01
          Length = 194056

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 185    gaaaaagaaaatagaaatttaggggg 210
              ||||||||||| ||||||||||||||
Sbjct: 127360 gaaaaagaaaagagaaatttaggggg 127385
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>gb|AC146092.2| Pan troglodytes BAC clone RP43-48I3 from 7, complete sequence
          Length = 174070

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 70    tatacaaaataacactgacaaaggt 94
             |||||||||||||||| ||||||||
Sbjct: 83621 tatacaaaataacactcacaaaggt 83597
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>gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosome 3, complete sequence
          Length = 203824

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 172   tgaggtagaaatggaaaaagaaaat 196
             ||||| |||||||||||||||||||
Sbjct: 44953 tgaggaagaaatggaaaaagaaaat 44929
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>gb|AC152064.3| Pan troglodytes BAC clone RP43-134I6 from chromosome 7, complete
             sequence
          Length = 179272

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    tatacaaaataacactgacaaaggt 94
             |||||||||||||||| ||||||||
Sbjct: 82281 tatacaaaataacactcacaaaggt 82305
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>gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, complete sequence
          Length = 201536

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   aatggaaaaagaaaatagaaa 201
             |||||||||||||||||||||
Sbjct: 77233 aatggaaaaagaaaatagaaa 77253
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>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence
          Length = 162705

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    gaaatggaaaaagaaaataga 199
              |||||||||||||||||||||
Sbjct: 100662 gaaatggaaaaagaaaataga 100642
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>gb|AC097061.2| Homo sapiens chromosome 1 clone RP11-415L24, complete sequence
          Length = 165311

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   atccatgattttgcttgctgcactt 134
             |||||||||||||||| ||||||||
Sbjct: 31937 atccatgattttgctttctgcactt 31961
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>gb|AC093107.3| Homo sapiens chromosome 7 clone RP11-751K21, complete sequence
          Length = 197837

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 70    tatacaaaataacactgacaaaggt 94
             |||||||||||||||| ||||||||
Sbjct: 82530 tatacaaaataacactcacaaaggt 82506
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>gb|AC068551.6| Homo sapiens BAC clone RP11-720N12 from 2, complete sequence
          Length = 118334

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   gttgtacaaatagaaaagggc 168
             |||||||||||||||||||||
Sbjct: 92731 gttgtacaaatagaaaagggc 92711
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>gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence
          Length = 207865

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tggaaaaagaaaatagaaatt 203
             |||||||||||||||||||||
Sbjct: 61869 tggaaaaagaaaatagaaatt 61889
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>gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence
          Length = 152058

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    tggaaaaagaaaatagaaatt 203
              |||||||||||||||||||||
Sbjct: 124501 tggaaaaagaaaatagaaatt 124521
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>emb|AL833782.13| Mouse DNA sequence from clone RP23-83L24 on chromosome X, complete
              sequence
          Length = 198249

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 177    tagaaatggaaaaagaaaatagaaa 201
              ||||||||||||||||||| |||||
Sbjct: 115693 tagaaatggaaaaagaaaaaagaaa 115669
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>gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, complete sequence
          Length = 218336

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    aatggaaaaagaaaatagaaa 201
              |||||||||||||||||||||
Sbjct: 129490 aatggaaaaagaaaatagaaa 129470
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>gb|AF043690.1|AF043690 Mus musculus Mouse mammary tumor virus clone 66C env precursor (env)
            and vSAG protein (vSAG) mRNA, complete cds
          Length = 1786

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 177  tagaaatggaaaaagaaaatagaaa 201
            |||||||||||| ||||||||||||
Sbjct: 1424 tagaaatggaaatagaaaatagaaa 1448
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>gb|BC109315.1| Homo sapiens BTB (POZ) domain containing 3, mRNA (cDNA clone
            MGC:130038 IMAGE:40036410), complete cds
          Length = 3136

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2540 ggaaaaagaaaatagaaatt 2521
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>gb|BC109316.1| Homo sapiens BTB (POZ) domain containing 3, mRNA (cDNA clone
            MGC:130039 IMAGE:40036411), complete cds
          Length = 3136

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2540 ggaaaaagaaaatagaaatt 2521
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>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence
          Length = 194045

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    agaaatggaaaaagaaaata 197
              ||||||||||||||||||||
Sbjct: 121098 agaaatggaaaaagaaaata 121079
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>ref|NM_001002964.1| Canis familiaris hepatocyte growth factor (hepapoietin A; scatter
            factor) (HGF), mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   tacaaaataacactgacaaa 91
            ||||||||||||||||||||
Sbjct: 2379 tacaaaataacactgacaaa 2360
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>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence
          Length = 218995

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   tagaaatggaaaaagaaaatagaa 200
             |||||||||||||||||| |||||
Sbjct: 56426 tagaaatggaaaaagaaattagaa 56403
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>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete
              sequence
          Length = 196547

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    aatggaaaaagaaaatagaa 200
              ||||||||||||||||||||
Sbjct: 142897 aatggaaaaagaaaatagaa 142916
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>ref|NM_181443.1| Homo sapiens BTB (POZ) domain containing 3 (BTBD3), transcript
            variant 2, mRNA
          Length = 4566

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2586 ggaaaaagaaaatagaaatt 2567
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>ref|NM_014962.2| Homo sapiens BTB (POZ) domain containing 3 (BTBD3), transcript
            variant 1, mRNA
          Length = 4857

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2877 ggaaaaagaaaatagaaatt 2858
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>gb|AY543632.1| Canis familiaris hepatocyte growth factor mRNA, complete cds
          Length = 2599

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   tacaaaataacactgacaaa 91
            ||||||||||||||||||||
Sbjct: 2379 tacaaaataacactgacaaa 2360
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>ref|XM_841752.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.3370)
           partial mRNA
          Length = 444

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  acaaaataacactgacaaag 92
           ||||||||||||||||||||
Sbjct: 385 acaaaataacactgacaaag 366
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>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete
             sequence
          Length = 202415

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   tagaaatggaaaaagaaaatagaa 200
             |||||||||||||||||| |||||
Sbjct: 19321 tagaaatggaaaaagaaattagaa 19298
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>gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosome 6, complete sequence
          Length = 195925

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ggtagaaatggaaaaagaaa 194
             ||||||||||||||||||||
Sbjct: 10065 ggtagaaatggaaaaagaaa 10084
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>gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, complete sequence
          Length = 187791

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  ggtagaaatggaaaaagaaa 194
            ||||||||||||||||||||
Sbjct: 4544 ggtagaaatggaaaaagaaa 4525
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>gb|BC040835.1| Homo sapiens cDNA clone IMAGE:5301683
          Length = 1318

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 aaaaagaaaatagaaattta 205
           ||||||||||||||||||||
Sbjct: 588 aaaaagaaaatagaaattta 607
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>gb|BC026168.1| Homo sapiens neural precursor cell expressed, developmentally
            down-regulated 1, mRNA (cDNA clone IMAGE:4825704), with
            apparent retained intron
          Length = 3623

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  tggaaaaagaaaatagaaat 202
            ||||||||||||||||||||
Sbjct: 3146 tggaaaaagaaaatagaaat 3127
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>emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 in linkage group 13,
             complete sequence
          Length = 180933

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 174   aggtagaaatggaaaaagaaaatagaaattta 205
             ||||||||||||||||| |||| | |||||||
Sbjct: 99807 aggtagaaatggaaaaataaaaaaaaaattta 99776
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>emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on chromosome 6 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
             and a novel gene, complete sequence
          Length = 138027

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   aatggaaaaagaaaatagaa 200
             ||||||||||||||||||||
Sbjct: 46804 aatggaaaaagaaaatagaa 46823
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>emb|AL356963.17| Human DNA sequence from clone RP11-535A9 on chromosome 6, complete
            sequence
          Length = 91469

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  cacttctcttccatgcaggt 149
            ||||||||||||||||||||
Sbjct: 8327 cacttctcttccatgcaggt 8308
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>emb|AL355358.9| Human DNA sequence from clone RP11-536L15 on chromosome 6 Contains a
             ribosomal protein S29 (RPS29) pseudogene, complete
             sequence
          Length = 141825

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aaaaagaaaatagaaattta 205
             ||||||||||||||||||||
Sbjct: 97466 aaaaagaaaatagaaattta 97447
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>emb|AL138847.14| Human DNA sequence from clone RP5-849H19 on chromosome 1p32.1-33
             Contains part of the DOCK7 gene for dedicator of
             cytokinesis 7, a ribosomal protein L13a (RPL13A) and the
             ANGPTL3 gene for angiopoietin-like 3, complete sequence
          Length = 66673

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aaaaagaaaatagaaattta 205
             ||||||||||||||||||||
Sbjct: 55494 aaaaagaaaatagaaattta 55475
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>emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J24 on chromosome 20p11.23-12.3
             Contains the BTBD3 gene for BTB (POZ) domain containing 3
             (KIAA0952), a novel gene and a CpG island, complete
             sequence
          Length = 167075

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ggaaaaagaaaatagaaatt 203
             ||||||||||||||||||||
Sbjct: 40919 ggaaaaagaaaatagaaatt 40900
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>emb|AJ311552.1|UFA311552 Uromyces fabae TBB1 gene for beta-tubulin, exons 1-10
          Length = 4975

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 4112 ggaaaaagaaaatagaaatt 4131
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>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5
          Length = 348034

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agaaatggaaaaagaaaata 197
             ||||||||||||||||||||
Sbjct: 53614 agaaatggaaaaagaaaata 53595
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>emb|AL138651.1|ATT17J13 Arabidopsis thaliana DNA chromosome 3, BAC clone T17J13
          Length = 85217

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agaaatggaaaaagaaaata 197
             ||||||||||||||||||||
Sbjct: 56602 agaaatggaaaaagaaaata 56583
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>emb|AL732508.13| Mouse DNA sequence from clone RP23-270A11 on chromosome 4, complete
             sequence
          Length = 72254

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   aaaaagaaaatagaaattta 205
             ||||||||||||||||||||
Sbjct: 53607 aaaaagaaaatagaaattta 53626
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>emb|CR860153.1| Pongo pygmaeus mRNA; cDNA DKFZp459C1423 (from clone DKFZp459C1423)
          Length = 4542

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2529 ggaaaaagaaaatagaaatt 2510
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>emb|CR407586.6| Zebrafish DNA sequence from clone CH211-283G6 in linkage group 18,
             complete sequence
          Length = 134596

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaagaaaatagaaatttagg 207
             ||||||||||||||||||||
Sbjct: 92252 aaagaaaatagaaatttagg 92271
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>emb|AL137756.1|HSM802398 Homo sapiens mRNA; cDNA DKFZp434B055 (from clone DKFZp434B055)
          Length = 5680

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 3681 ggaaaaagaaaatagaaatt 3662
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>emb|BX649505.6| Zebrafish DNA sequence from clone CH211-113M13 in linkage group 23,
             complete sequence
          Length = 125164

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   gtagaaatggaaaaagaaaa 195
             ||||||||||||||||||||
Sbjct: 89636 gtagaaatggaaaaagaaaa 89617
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>dbj|AK024349.1| Homo sapiens cDNA FLJ14287 fis, clone PLACE1006360
          Length = 2553

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 ggaaaaagaaaatagaaatt 203
           ||||||||||||||||||||
Sbjct: 574 ggaaaaagaaaatagaaatt 555
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>emb|CR293505.5| Zebrafish DNA sequence from clone DKEY-76D14 in linkage group 18,
             complete sequence
          Length = 32026

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   gaaaaagaaaatagaaattt 204
             ||||||||||||||||||||
Sbjct: 18206 gaaaaagaaaatagaaattt 18187
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>gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complete sequence
          Length = 167791

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 178    agaaatggaaaaagaaaatagaaa 201
              ||||||||||||||||| ||||||
Sbjct: 135015 agaaatggaaaaagaaattagaaa 135038
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 180    aaatggaaaaagaaaatagaaatt 203
              ||||| ||||||||||||||||||
Sbjct: 873417 aaatgtaaaaagaaaatagaaatt 873440
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>gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-93e11, complete
             sequence
          Length = 119127

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   aaaagaaaatagaaatttag 206
             ||||||||||||||||||||
Sbjct: 57168 aaaagaaaatagaaatttag 57187
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>gb|AF289207.2|H010058S03 Mus musculus aspartyl beta-hydroxylase (ASPH) gene, exons 4 through 13,
             and alternative exon 14a; and aspartyl beta-hydroxylase
             Humbug splice variant, complete cds
          Length = 31248

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aaaaagaaaatagaaattta 205
             ||||||||||||||||||||
Sbjct: 12988 aaaaagaaaatagaaattta 12969
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>gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, complete sequence
          Length = 196671

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tacaaatagaaaagggcatg 171
              ||||||||||||||||||||
Sbjct: 106757 tacaaatagaaaagggcatg 106776
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>ref|NM_001009830.1| Felis catus hepatocyte growth factor (HGF), mRNA
          Length = 3460

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   tacaaaataacactgacaaa 91
            ||||||||||||||||||||
Sbjct: 2449 tacaaaataacactgacaaa 2430
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>gb|M32672.1|HUMGPP3A07 Homo sapiens glycoprotein IIIa (ITGB3) gene, exon 3
          Length = 2244

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 180  aaatggaaaaagaaaatagaaatt 203
            |||||||||||||||| |||||||
Sbjct: 1209 aaatggaaaaagaaaagagaaatt 1186
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>dbj|AB080187.1| Felis catus HGF mRNA for hepatocyte growth factor, complete cds
          Length = 3460

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   tacaaaataacactgacaaa 91
            ||||||||||||||||||||
Sbjct: 2449 tacaaaataacactgacaaa 2430
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>dbj|AB023169.1| Homo sapiens mRNA for KIAA0952 protein, partial cds
          Length = 4856

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ggaaaaagaaaatagaaatt 203
            ||||||||||||||||||||
Sbjct: 2877 ggaaaaagaaaatagaaatt 2858
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>gb|AC013417.4|AC013417 Homo sapiens 12q22-103.4-106.5 BAC RP11-397H6 (Roswell Park Cancer
            Institute Human BAC Library) complete sequence
          Length = 114049

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  tggaaaaagaaaatagaaat 202
            ||||||||||||||||||||
Sbjct: 4752 tggaaaaagaaaatagaaat 4733
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>emb|AL832468.1|HSM803776 Homo sapiens mRNA; cDNA DKFZp313A0321 (from clone DKFZp313A0321)
          Length = 3163

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  tggaaaaagaaaatagaaat 202
            ||||||||||||||||||||
Sbjct: 2832 tggaaaaagaaaatagaaat 2813
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>emb|AL832466.1|HSM803774 Homo sapiens mRNA; cDNA DKFZp313N211 (from clone DKFZp313N211)
          Length = 3361

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  tggaaaaagaaaatagaaat 202
            ||||||||||||||||||||
Sbjct: 2873 tggaaaaagaaaatagaaat 2854
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>emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chromosome 4, complete
             sequence
          Length = 220248

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    acacaggctttcaggtttcc 46
             ||||||||||||||||||||
Sbjct: 37927 acacaggctttcaggtttcc 37946
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>emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-101G3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161204

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 178   agaaatggaaaaagaaaatagaaa 201
             |||||||||||||| |||||||||
Sbjct: 85176 agaaatggaaaaaggaaatagaaa 85153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,055,603
Number of Sequences: 3902068
Number of extensions: 4055603
Number of successful extensions: 93602
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93425
Number of HSP's gapped (non-prelim): 177
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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