| Clone Name | rbags37l12 |
|---|---|
| Clone Library Name | barley_pub |
>SOT1_SPIOL (Q41364) 2-oxoglutarate/malate translocator, chloroplast precursor| Length = 569 Score = 299 bits (765), Expect = 6e-81 Identities = 137/155 (88%), Positives = 146/155 (94%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHY 519 SVAWDTLTWFAALIAMAGYLNKYGLI+WFSE VVK VGGLGLSWQ+SFGVLVL+YFYSHY Sbjct: 415 SVAWDTLTWFAALIAMAGYLNKYGLITWFSENVVKVVGGLGLSWQMSFGVLVLLYFYSHY 474 Query: 518 FFASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGAGY 339 FFASGAAHIGAMFTAFLSVASALGTPP AA+V+SFLSNLMGGLTHYGIGSAPVFYGA Y Sbjct: 475 FFASGAAHIGAMFTAFLSVASALGTPPFLAAIVLSFLSNLMGGLTHYGIGSAPVFYGANY 534 Query: 338 VPLAEWWGYGFVISVVNIIIWLGAGGFWWKMIGLW 234 VPL +WWGYGF+IS+VN+IIWLG GG WWK IGLW Sbjct: 535 VPLPQWWGYGFLISIVNLIIWLGVGGLWWKAIGLW 569
>YFLS_BACSU (O34726) Putative malate transporter yflS| Length = 478 Score = 208 bits (530), Expect = 1e-53 Identities = 86/153 (56%), Positives = 119/153 (77%) Frame = -3 Query: 692 AWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFF 513 AWDTLTWFAAL+ +A +LN+ G++SWFS + V G SW ++F +L+++Y+YSHYFF Sbjct: 328 AWDTLTWFAALVMLANFLNELGMVSWFSNAMKSSVSGF--SWIVAFIILIVVYYYSHYFF 385 Query: 512 ASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGAGYVP 333 AS AHI AM++AFL+V A G PPL AA+ ++F+SNL G THYG G+APVF+GAGY+P Sbjct: 386 ASATAHISAMYSAFLAVVVAAGAPPLLAALSLAFISNLFGSTTHYGSGAAPVFFGAGYIP 445 Query: 332 LAEWWGYGFVISVVNIIIWLGAGGFWWKMIGLW 234 +WW GF++S+V+II+WL GG WWK++G+W Sbjct: 446 QGKWWSIGFILSIVHIIVWLVIGGLWWKVLGIW 478
>Y020_HAEIN (Q57048) Hypothetical protein HI0020| Length = 479 Score = 106 bits (265), Expect = 6e-23 Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 3/153 (1%) Frame = -3 Query: 692 AWDTLTWFAALIAMAGYLNKYGLISWFSET---VVKFVGGLGLSWQLSFGVLVLMYFYSH 522 AW+TL W+ +I M+G L K G W + T +++F G ++ V++ + Sbjct: 325 AWNTLVWYGGIIGMSGLLEKSGFFKWLANTLSTILQFEG----HGMMALIVILTLSVSVR 380 Query: 521 YFFASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGAG 342 Y FASG A++ AM F +V G P A+ + F ++ G +THYG G P+ +GAG Sbjct: 381 YLFASGGAYVAAMVPVFATVGHVTGAPTELLALGLVFANSYGGSVTHYGGGPGPIAFGAG 440 Query: 341 YVPLAEWWGYGFVISVVNIIIWLGAGGFWWKMI 243 Y + WW G +I+ ++II L G WWK++ Sbjct: 441 YNDIKSWWITGAIIAFGSLIIHLTIGMAWWKLL 473
>YBHI_ECOLI (P75763) Inner membrane protein ybhI| Length = 477 Score = 104 bits (260), Expect = 2e-22 Identities = 47/152 (30%), Positives = 82/152 (53%) Frame = -3 Query: 689 WDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFFA 510 W+TL W+ +I ++ L+K W +E + G ++F V++ + YFFA Sbjct: 324 WNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHG-NVAFFVIIFLSIIVRYFFA 382 Query: 509 SGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGAGYVPL 330 SG+A+I AM F +A+ G P + A+ + F ++ G +THYG + PV +G GY + Sbjct: 383 SGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDI 442 Query: 329 AEWWGYGFVISVVNIIIWLGAGGFWWKMIGLW 234 WW G V++++ ++ + G +WW M+ W Sbjct: 443 KSWWLVGAVLTILTFLVHITLGVWWWNMLIGW 474
>CITT_ECOLI (P0AE74) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 92.8 bits (229), Expect = 9e-19 Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Frame = -3 Query: 692 AWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFF 513 AW+TL A L+ MA L + G I WF+ T+ + G S + VLVL+++++HY F Sbjct: 338 AWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGF--SPNATVIVLVLVFYFAHYLF 395 Query: 512 ASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLS-NLMGGLTHYGIGSAPVFYGAGYV 336 AS +AH M L+V + P+ ++ LS +MG LT Y G + YG GYV Sbjct: 396 ASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYV 455 Query: 335 PLAEWWGYGFVISVVNIIIWLGAGGFWWKMIGLW 234 ++W G + V+ I + L G W ++ +W Sbjct: 456 KSKDYWRLGAIFGVIYISMLLLVG---WPILAMW 486
>CITT_ECO57 (P0AE75) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 92.8 bits (229), Expect = 9e-19 Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Frame = -3 Query: 692 AWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFF 513 AW+TL A L+ MA L + G I WF+ T+ + G S + VLVL+++++HY F Sbjct: 338 AWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGF--SPNATVIVLVLVFYFAHYLF 395 Query: 512 ASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLS-NLMGGLTHYGIGSAPVFYGAGYV 336 AS +AH M L+V + P+ ++ LS +MG LT Y G + YG GYV Sbjct: 396 ASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYV 455 Query: 335 PLAEWWGYGFVISVVNIIIWLGAGGFWWKMIGLW 234 ++W G + V+ I + L G W ++ +W Sbjct: 456 KSKDYWRLGAIFGVIYISMLLLVG---WPILAMW 486
>TTDT_ECOLI (P39414) Putative tartrate carrier (Tartrate transporter)| (Tartrate/succinate antiporter) Length = 487 Score = 89.7 bits (221), Expect = 8e-18 Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 4/154 (2%) Frame = -3 Query: 692 AWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFF 513 AW+ W A+LI +A LN G ISWF + + + G S + L+++++ YFF Sbjct: 337 AWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGY--SPTMVMVALIVVFYLLRYFF 394 Query: 512 ASGAAHIGAMFTAFLSVASALGTP----PLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGA 345 AS A+ A+ A + +A+AL P P+F MV + + L LT Y G +P++YG+ Sbjct: 395 ASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAIG-LGSILTPYATGPSPIYYGS 451 Query: 344 GYVPLAEWWGYGFVISVVNIIIWLGAGGFWWKMI 243 GY+P A++W G + ++ +++ + G W ++ Sbjct: 452 GYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVV 485
>Y608_HAEIN (Q57486) Hypothetical protein HI0608| Length = 461 Score = 42.7 bits (99), Expect = 0.001 Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 2/148 (1%) Frame = -3 Query: 689 WDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFFA 510 W L F + ++ L G ++++V + G G+LV + F Sbjct: 318 WGVLMLFGGGLTLSAVLKDSGASKILADSIVFMIDGQHF---YLIGLLVAAFIIFLTEFT 374 Query: 509 SGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAP--VFYGAGYV 336 S A + F+S+A +LG P + A+++ ++ L + + P + +G+G V Sbjct: 375 SNTASAALLVPIFISIAQSLGMPEIGLALIIGIGASCAFMLP---VATPPNAIVFGSGQV 431 Query: 335 PLAEWWGYGFVISVVNIIIWLGAGGFWW 252 +E GF++++V +++ G +W Sbjct: 432 KQSEMVKVGFLLNLVCVVVIATMGYMFW 459
>Y2685_MYCTU (O07187) Hypothetical protein Rv2685/MT2759| Length = 428 Score = 36.2 bits (82), Expect = 0.098 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGG 582 SV WDTL +FA L M G L K G++ + + GG Sbjct: 273 SVEWDTLLFFAGLFVMVGALVKTGVVEQLARAATELTGG 311
>Y640_SYNY3 (P72958) Hypothetical protein sll0640| Length = 612 Score = 35.8 bits (81), Expect = 0.13 Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 2/138 (1%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHY 519 ++ WD + A LI + + G +WF+ + G L + +L+L Y + Sbjct: 462 AIRWDVIFLLAGLIPLGTAMENSGTTAWFASFLADAGGHLS-----GYALLLLFYLATAL 516 Query: 518 F--FASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGA 345 S A + M VA +LG PL V++F ++ ++ G + + YG Sbjct: 517 LTEILSNNATVVLMLPIAFQVAQSLGLNPLAFMFVVTFAAS-NSFMSPIGYQTNTMVYGP 575 Query: 344 GYVPLAEWWGYGFVISVV 291 G ++ G ++V+ Sbjct: 576 GGYRFTDFARIGAPLTVI 593
>Y2703_MYCBO (P0A607) Hypothetical protein Mb2703| Length = 429 Score = 35.4 bits (80), Expect = 0.17 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGG 582 SV WDTL +FA L M G L K G+++ + + GG Sbjct: 273 SVEWDTLLFFAGLFIMVGALVKTGVVNDLARAATQLTGG 311
>Y2684_MYCTU (P0A606) Hypothetical protein Rv2684/MT2758| Length = 429 Score = 35.4 bits (80), Expect = 0.17 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGG 582 SV WDTL +FA L M G L K G+++ + + GG Sbjct: 273 SVEWDTLLFFAGLFIMVGALVKTGVVNDLARAATQLTGG 311
>PO3F4_MESAU (Q812B1) POU domain, class 3, transcription factor 4| (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4) Length = 361 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = +3 Query: 213 PHLLCFSPQTNHLPPEASSTKPDDDVNNGDDKSIAPPLSQRNIARSIEDGG---*PYAIM 383 PH+ SP TNH +S P+ + N ++ +E GG P A Sbjct: 99 PHVAHHSPHTNHPNAWGASPAPNSSITNSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAAS 158 Query: 384 GQATHEV*KE*HNHGSEKRRGAQGTCHRQERSEHRS 491 Q+ H V +E +HG G+ H Q+ S+ + Sbjct: 159 TQSLHPVLREPPDHGE------LGSHHCQDHSDEET 188
>S35B4_DROME (Q9W429) UDP-xylose and UDP-N-acetylglucosamine transporter-like| Length = 352 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Frame = -3 Query: 659 IAMAGYLNKYGLISWFSETV-VKFVGGLGLSWQLSFGVLVLMYFYSHYFFASGAAHIGAM 483 + MAG + ++ I+W SE V V +G +GL W+ + L+ + A ++ Sbjct: 214 LIMAGNIVQHFGIAWSSEPVAVPLLGAIGLEWKFPLMLFYLLCNVVTQYVCISAVYVLTT 273 Query: 482 FTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYG 348 A L+V + T F +++ S + ++ +G+ VF+G Sbjct: 274 ECASLTVTLVV-TLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFG 317
>AG45_MYCLE (P46838) 46 kDa membrane protein| Length = 429 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -3 Query: 698 SVAWDTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLG-LSWQLSFGVLVLM 537 SV W+TL +FA L M G L K +++ + GG L+ L+ GV L+ Sbjct: 274 SVKWETLLFFAGLFIMVGALVKTDVVNQLARATTTLTGGHELLTVVLTLGVSTLV 328
>PSBC_GUITH (O78426) Photosystem II 44 kDa reaction center protein (P6 protein)| (CP43) Length = 473 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 10/40 (25%) Frame = -3 Query: 344 GYVPLAEWWGYGFVISVVNI------IIWLG----AGGFW 255 GYV + W G G+++SV N+ IW+G AGGFW Sbjct: 211 GYVLKSPWGGDGWIVSVNNMEDVVGGHIWIGFTCIAGGFW 250
>Y793_SYNY3 (Q55939) UPF0060 membrane protein sll0793| Length = 108 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/85 (23%), Positives = 34/85 (40%) Frame = -3 Query: 521 YFFASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAPVFYGAG 342 YF +G IG + +L + ++ + + L G A YG Sbjct: 8 YFVMAGLCEIGGGYLVWLWIREGKSVWLALVRAILLTVYGFVATLQPANFGRAYAAYGGI 67 Query: 341 YVPLAEWWGYGFVISVVNIIIWLGA 267 ++ L+ WG+ VV+ + WLGA Sbjct: 68 FIILSIIWGWQVDNVVVDRLDWLGA 92
>NU5C_GERJA (P51100) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 744 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -3 Query: 647 GYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFF 513 G N GL+S+F V+K VGG +S L F L +F Y+F Sbjct: 697 GIPNGVGLMSFFVAEVIKSVGGGRISSYLFFYFSYLSFFLLIYYF 741
>MOT2_RAT (Q63344) Monocarboxylate transporter 2 (MCT 2)| Length = 489 Score = 30.8 bits (68), Expect = 4.1 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 15/104 (14%) Frame = -3 Query: 626 LISWFSETVVK------FVGGLGLSWQLSFGVLVL-MYFYSHYFFASGAAHIG------- 489 +++ FS +V++ F+GGLGL++ L + ++ YFY A+G A G Sbjct: 107 ILASFSSSVIELYLTVGFIGGLGLAFNLQPALTIIGKYFYRKRPLANGFAMAGSPVFLST 166 Query: 488 -AMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAP 360 A F FL ++ G F + FL + + G +G +P Sbjct: 167 LAPFNQFL--FNSYGWKGSFLILGAIFLHSCVAGCLMRPVGPSP 208
>GLGB_GLOIN (Q8NKE1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 683 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = -3 Query: 683 TLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFFASG 504 +L + A + ++ + G + F++ V+K + LG + + LM H ++AS Sbjct: 181 SLRIYEAHVGISTNEGRVGTYNEFTDNVLKRIKDLG------YNAIQLMAIMEHAYYAS- 233 Query: 503 AAHIGAMFTAFLSVASALGTP 441 G T+F V+S GTP Sbjct: 234 ---FGYQVTSFFGVSSRYGTP 251
>PSTA2_MYCTU (P0A626) Phosphate transport system permease protein pstA-2| Length = 301 Score = 30.8 bits (68), Expect = 4.1 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 13/111 (11%) Frame = -3 Query: 632 YGLISWFSETVVKFVGGLGL------SWQLSFGVLVLMYFYSHYFFASGAAHIGAMFTAF 471 Y ++S V+ +VG L L + L+ GVLVL Y + + + + T++ Sbjct: 124 YEVLSGIPSIVLGYVGYLALVVYFDWGFSLAAGVLVLSVMSIPYIAKATESALAQVPTSY 183 Query: 470 LSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIG-------SAPVFYGAGY 339 A ALG P +A + + + G +T + +AP+ Y AG+ Sbjct: 184 REAAEALGLPAGWALRKIVLKTAMPGIVTGMLVALALAIGETAPLLYTAGW 234
>PSTA2_MYCBO (P0A627) Phosphate transport system permease protein pstA-2| Length = 301 Score = 30.8 bits (68), Expect = 4.1 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 13/111 (11%) Frame = -3 Query: 632 YGLISWFSETVVKFVGGLGL------SWQLSFGVLVLMYFYSHYFFASGAAHIGAMFTAF 471 Y ++S V+ +VG L L + L+ GVLVL Y + + + + T++ Sbjct: 124 YEVLSGIPSIVLGYVGYLALVVYFDWGFSLAAGVLVLSVMSIPYIAKATESALAQVPTSY 183 Query: 470 LSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIG-------SAPVFYGAGY 339 A ALG P +A + + + G +T + +AP+ Y AG+ Sbjct: 184 REAAEALGLPAGWALRKIVLKTAMPGIVTGMLVALALAIGETAPLLYTAGW 234
>RCEM_RHORU (P10718) Reaction center protein M chain (Photosynthetic reaction| center M subunit) Length = 305 Score = 30.4 bits (67), Expect = 5.4 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 13/98 (13%) Frame = -3 Query: 530 YSHYFFASGAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMG---------GLTHY 378 +S++ G A IG ++ V S + FA ++ F NL+ G + Sbjct: 34 FSYWLGKIGDAQIGPIYLGTTGVLSLVFG--FFAIEIIGF--NLLASVNWSPMEFGRQFF 89 Query: 377 GIGSAP--VFYGAGYVPLAE--WWGYGFVISVVNIIIW 276 +G P YG G+ PLAE WW +I++W Sbjct: 90 WLGLEPPAAEYGLGFAPLAEGGWWQIAGFFLTTSILLW 127
>PO3F4_HUMAN (P49335) POU domain, class 3, transcription factor 4| (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4) Length = 361 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = +3 Query: 213 PHLLCFSPQTNHLPPEASSTKPDDDVNNGDDKSIAPPLSQRNIARSIEDGG---*PYAIM 383 PH+ SP TNH +S P+ + + ++ +E GG P A Sbjct: 99 PHVAHHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAAS 158 Query: 384 GQATHEV*KE*HNHGSEKRRGAQGTCHRQERSEHRS 491 Q+ H V +E +HG G+ H Q+ S+ + Sbjct: 159 AQSLHPVLREPPDHGE------LGSHHCQDHSDEET 188
>MCH1_ASHGO (Q752I1) Probable transporter MCH1| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = -3 Query: 587 GGLGLSWQLSFGVLVLMYFYSHYFFASGAAHIGAMFTAFLSV---ASALGTPPLFAAMVM 417 G + LSW LSF V Y Y+ + FASG H A F + +AL LF A + Sbjct: 93 GPVMLSW-LSFVGFVPTYAYAAWVFASGEPHFYASVLCFTLIGISTNALYFSALFTASKL 151 Query: 416 ---SFLSNLMGGLTHYGIGS 366 S L ++ T YG+ S Sbjct: 152 YPASKLCSISLPATFYGMAS 171
>MRAY_PELLD (Q3B126) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 368 Score = 30.4 bits (67), Expect = 5.4 Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Frame = -3 Query: 686 DTLTWFAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSW----QLSFGVLVLMYFYSHY 519 D W L + ++ G I + + V+K GGL W Q++ G++V +Y Sbjct: 96 DPHVWLIMLAVL--WMGVVGFIDDYRKVVLKVKGGLSPRWKLVAQVALGLVVGIYTSLDP 153 Query: 518 FFASGAAHIGAMFTAFLSVASALGTPP--LFAAMVMSFLSNLMGGLTHYGIGSAPVF--- 354 F+ F L++ P +F +S NL GL GS+ + Sbjct: 154 AFSVLMRETSVPFFKNLTIDYGYFYIPVVIFIITALSNAVNLTDGLDGLASGSSAIVVFA 213 Query: 353 -----YGAGYVPLAEWWGYGFV-----ISVVNIIIWLGAGGFWW 252 Y AG A + F+ I+VV + I + + GF W Sbjct: 214 LGGFAYLAGNAVYATYLSIPFIPGGGEIAVVCMAIVMASVGFLW 257
>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of| deformed) (52-kDa bracketing protein) (B52 protein) Length = 375 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/80 (25%), Positives = 35/80 (43%) Frame = +3 Query: 435 KRRGAQGTCHRQERSEHRSDVCSTTSKEVVGVEVHQHQYTE*ELPGQTETSNKLNNSLAE 614 K RG + +S RS S S++V + H T P + S + S+++ Sbjct: 239 KSRGGRSKSKSPVKSRSRSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSK 298 Query: 615 PRNQSIFVEVASHRNQRSKP 674 ++S + HR+ RS+P Sbjct: 299 RESRSRSRSKSIHRDSRSRP 318
>ZN408_HUMAN (Q9H9D4) Zinc finger protein 408 (PR-domain zinc finger protein 17)| Length = 720 Score = 30.4 bits (67), Expect = 5.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -2 Query: 498 THRSDVHCVPVCGKCLGHPSAFRCH 424 +H + H PVCGK L P R H Sbjct: 545 SHTGEAHLCPVCGKALRDPHTLRAH 569
>RNFD_BUCAP (Q8KA19) Electron transport complex protein rnfD| Length = 349 Score = 30.0 bits (66), Expect = 7.1 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Frame = -3 Query: 542 LMYFYSHYFFASGAAHI---GAMFTAFLSVASALGTP-----PLFAAMVMSFLSNLMGGL 387 + YFYS FF S H+ G M AF + T +F +++ FL ++ Sbjct: 255 ITYFYSQKFFCSPLFHLFSGGTMMCAFFIATDPVTTSCTKIGKIFFGLIIGFLVWIIRNY 314 Query: 386 THYGIGSA-PVFYGAGYVPLAEWW----GYG 309 + Y G A V + VPL + + GYG Sbjct: 315 SDYPDGIAFSVLFANMIVPLMDAYLKTSGYG 345
>PO3F4_RAT (P62516) POU domain, class 3, transcription factor 4| (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4) (RHS2 class III POU protein) Length = 361 Score = 30.0 bits (66), Expect = 7.1 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = +3 Query: 213 PHLLCFSPQTNHLPPEASSTKPDDDVNNGDDKSIAPPLSQRNIARSIEDGG---*PYAIM 383 PH+ SP TNH +S P+ + + ++ +E GG P A Sbjct: 99 PHVAHHSPHTNHPNAWGASPAPNSSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAAS 158 Query: 384 GQATHEV*KE*HNHGSEKRRGAQGTCHRQERSEHRS 491 Q+ H V +E +HG G+ H Q+ S+ + Sbjct: 159 TQSLHPVLREPPDHGE------LGSHHCQDHSDEET 188
>PO3F4_MOUSE (P62515) POU domain, class 3, transcription factor 4| (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4) Length = 361 Score = 30.0 bits (66), Expect = 7.1 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = +3 Query: 213 PHLLCFSPQTNHLPPEASSTKPDDDVNNGDDKSIAPPLSQRNIARSIEDGG---*PYAIM 383 PH+ SP TNH +S P+ + + ++ +E GG P A Sbjct: 99 PHVAHHSPHTNHPNAWGASPAPNSSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAAS 158 Query: 384 GQATHEV*KE*HNHGSEKRRGAQGTCHRQERSEHRS 491 Q+ H V +E +HG G+ H Q+ S+ + Sbjct: 159 TQSLHPVLREPPDHGE------LGSHHCQDHSDEET 188
>MOK12_SCHPO (Q9UUL4) Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)| Length = 2352 Score = 30.0 bits (66), Expect = 7.1 Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Frame = -3 Query: 632 YGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSHYFFASGAAHIGAMFTAFL-SVAS 456 + L WF VV+ L L + FG+ ++ +H+F + A + A++ +++S Sbjct: 1980 FSLFWWFLSRVVQARYILSLPF-FFFGISFILVAITHFFQKTTACSVIQHIAAYVYAISS 2038 Query: 455 ALGTPPLFAAMVMSFLSNLMGGL-THYGIGSAPVFYGAGYVPLAEWWGYGFVISVVNIII 279 + G+ + ++ GG+ TH+ I A + +G + A W +G ++S ++ Sbjct: 2039 STGS------LYFAWNFGAEGGIATHHWILRACLVHGIQQIWSAILWSWGDLLSKKDLTQ 2092 Query: 278 WLGAGGF 258 +G G F Sbjct: 2093 NVGPGIF 2099
>Y195A_HAEIN (Q57362) MscS family protein HI0195.1 precursor| Length = 1111 Score = 29.6 bits (65), Expect = 9.2 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 Query: 288 HHHLAWCWRLLVEDDWFVVRNTVNVGLPISTR 193 H ++AWC W++VRNT+ G+ +S+R Sbjct: 719 HSYIAWCV-------WWLVRNTIYRGITVSSR 743
>MOT2_MOUSE (O70451) Monocarboxylate transporter 2 (MCT 2)| Length = 484 Score = 29.6 bits (65), Expect = 9.2 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 16/117 (13%) Frame = -3 Query: 662 LIAMAGYLNKYGLI-SWFSETVVK------FVGGLGLSWQLSFGVLVL-MYFYSHYFFAS 507 ++ + G L G+I + +S +V++ F+GGLGL++ L + ++ YFY A+ Sbjct: 89 VVIVGGLLCCIGMILASYSNSVIELYLTVGFIGGLGLAFNLQPALTIIGKYFYRRRPLAN 148 Query: 506 GAAHIGAMFTAFLSVASAL--------GTPPLFAAMVMSFLSNLMGGLTHYGIGSAP 360 G A G+ FLS + G F + FL + + G +G +P Sbjct: 149 GCAMAGS--PVFLSTLAPFNQYLFNNYGWKGSFLILGGIFLHSCVAGCLMRPVGPSP 203
>NU5C_ATHGR (P51098) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 741 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Frame = -3 Query: 647 GYLNKYGLISWFSETVVKFVGGLGLSWQLSF-----GVLVLMYFYSHY 519 G N GL+S+F V+K VGG +S L F + +L+Y++ +Y Sbjct: 694 GIPNGVGLMSFFVAEVIKSVGGGRISSYLFFYFSYVSIFLLIYYFLNY 741
>DPOLZ_HUMAN (O60673) DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (hREV3)| Length = 3130 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +3 Query: 231 SPQTNHLPPEASSTKPDDDVNNGDDKSIA-----PPLSQRNIARSIEDG 362 SP + +PP PD NGDD+ + P L+ N + I+DG Sbjct: 2119 SPDSPVIPPWQQPISPDSKALNGDDRPSSPVEELPSLAFENFLKPIKDG 2167
>YICL_SALTY (O33787) Inner membrane transport protein yicL| Length = 300 Score = 29.6 bits (65), Expect = 9.2 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 14/153 (9%) Frame = -3 Query: 698 SVAWDTLTW-FAALIAMAGYLNKYGLISWFSETVVKFVGGLGLSWQLSFGVLVLMYFYSH 522 S++ L W A+ A A Y +W S + ++ + W +SFG L+L+ FY+ Sbjct: 153 SISSAALFWGIASAFAAAFYT------TWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAK 206 Query: 521 ---YFFASGAAHI----------GAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTH 381 +F SG+ + F+ +L A +G P LS+ + L Sbjct: 207 EGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLL 266 Query: 380 YGIGSAPVFYGAGYVPLAEWWGYGFVISVVNII 282 GI L +W G ++S V +I Sbjct: 267 LGIS----------FTLPDWLGTLLILSSVILI 289
>TUB3_AGRVI (P70786) Putative tartrate transporter| Length = 449 Score = 29.6 bits (65), Expect = 9.2 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Frame = -3 Query: 674 WFAALIAMAGYLNKYGLISWFSET----VVKFVGGLGLSWQLSFGVLVLMYFYSHYFFAS 507 W A ++ G ++ GL+++ T +++F+ G+ + F +++Y S +F A Sbjct: 100 WIARVMITWGIVS--GLMAFVQGTTSFYILRFLLGVA---EAGFFPGIILYL-SFWFPAR 153 Query: 506 GAAHIGAMFTAFLSVASALGTPPLFAAMVMSFLSNLMGGLTHYGIGSAP 360 A + A+F A +++ LG+P A M M L L G + I +AP Sbjct: 154 RRAAVTALFMAAAPLSTVLGSPISGALMEMHGLMGLAGWQWMFLIEAAP 202 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,130,075 Number of Sequences: 219361 Number of extensions: 2393471 Number of successful extensions: 7546 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 7151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7533 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)