ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38a08 |
|---|---|
| Clone Library Name | barley_pub |
>YAWG_SCHPO (Q10190) Hypothetical GTP-binding protein C3F10.16c in chromosome I| Length = 616 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%) Frame = -3 Query: 621 SRGHV-SHAGLPDETRAARQILKDYIDGKIPHFELPP 514 SRG + +H G PD++RAAR +LKDY++GK+ + PP Sbjct: 431 SRGFMRAHHGTPDDSRAARILLKDYVNGKLLYVHPPP 467
>NOG2_CANGA (Q6FWS1) Nucleolar GTP-binding protein 2| Length = 494 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = -3 Query: 618 RGHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDETDAEDNSD 472 +G + G PDE+ ++QIL D+ GKIP F +PP + +D+ D + Sbjct: 435 QGRLLKGGEPDESGVSKQILNDFNRGKIPWFVIPPEKEEDKKRKLDEEE 483
>NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2| Length = 720 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDETDAEDNS 475 G + G PD+ AA+ +L D+I GK+P F PP + + DA +S Sbjct: 456 GKLLKGGEPDQEAAAKMVLNDWIRGKVPFFVAPPTKPESGADAHVSS 502
>YGJ9_YEAST (P53145) Hypothetical GTP-binding protein in SEH1-PRP20 intergenic| region Length = 640 Score = 38.9 bits (89), Expect = 0.013 Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -3 Query: 621 SRGHVSHA-GLPDETRAARQILKDYIDGKIPHFELPPGEIDDET 493 +RG+++ G DE RA+R ILKDY++GK+ + PP ++D+T Sbjct: 467 ARGYMTQGYGSADEPRASRYILKDYVNGKLLYVN-PPPHLEDDT 509
>NOG2_YEAST (P53742) Nucleolar GTP-binding protein 2| Length = 486 Score = 38.9 bits (89), Expect = 0.013 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = -3 Query: 618 RGHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDE 496 +G + G PDE+ ++QIL D+ GKIP F LPP + +E Sbjct: 435 QGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLPPEKEGEE 475
>NOG2_ASHGO (Q75DA4) Nucleolar GTP-binding protein 2| Length = 502 Score = 38.9 bits (89), Expect = 0.013 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = -3 Query: 618 RGHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDETDAEDNSDQE 466 +G + G PDET A+Q+L D+ GKIP F PP ++ +D E Sbjct: 434 QGRLLKGGEPDETGVAKQVLNDFNRGKIPWFVSPPDRDPQPETSKRPADSE 484
>MATK_SAPSA (Q646M7) Maturase K (Intron maturase)| Length = 522 Score = 37.7 bits (86), Expect = 0.028 Identities = 17/41 (41%), Positives = 28/41 (68%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S SF T + R FFL+ + + ++++ F FF+ Sbjct: 187 WNSLITPKKSISSFSTSNPR-FFLFLYNFHVYEYEFLFFFL 226
>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2| Length = 731 Score = 37.4 bits (85), Expect = 0.037 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGE 508 G + G PD+ AA+ +L D+I GKIP F PP + Sbjct: 466 GKLLKGGEPDQEAAAKMVLNDWIRGKIPFFVAPPAK 501
>NOG2_SCHPO (O14236) Nucleolar GTP-binding protein 2| Length = 537 Score = 36.2 bits (82), Expect = 0.082 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPG--EIDDE--------TDAEDNSDQE 466 G + G PDE A+ +L D++ GKIP F P G +DE T + SDQ+ Sbjct: 431 GRLLKGGEPDEASVAKMVLNDFMRGKIPWFIGPKGLSSSNDEINSSQKVATQQTEGSDQD 490 Query: 465 G 463 G Sbjct: 491 G 491
>NOG2_KLULA (Q6CSP9) Nucleolar GTP-binding protein 2| Length = 513 Score = 36.2 bits (82), Expect = 0.082 Identities = 18/51 (35%), Positives = 31/51 (60%) Frame = -3 Query: 618 RGHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDETDAEDNSDQE 466 +G + G PDE+ ++QIL D+ GKIP F PP + D+ + ++ D++ Sbjct: 434 QGRLLKGGEPDESGVSKQILNDFNRGKIPWFVPPPEK--DKIEEKEPGDKK 482
>MATK_RHOTS (O62991) Maturase K (Intron maturase)| Length = 506 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/40 (40%), Positives = 30/40 (75%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDF-SFFIF 313 WN+LITP+ S+ SF ++ ++ FFL+ + + +W++ S F+F Sbjct: 190 WNSLITPKKSSFSF-SIRNQRFFLFLYNFNVWEYESIFVF 228
>MATK_CUPAN (Q646R8) Maturase K (Intron maturase)| Length = 507 Score = 34.7 bits (78), Expect = 0.24 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T + R FFL+ + ++++ F FF+ Sbjct: 187 WNSLITPKKSISGFSTSNPR-FFLFLYNSHVYEYEFLFFFL 226
>NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2| Length = 619 Score = 34.7 bits (78), Expect = 0.24 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDETDAEDNSD 472 G + G PD A+ +L D++ GKIP F P + + ETD + + Sbjct: 446 GRLLKGGEPDVDGVAKMVLNDFMRGKIPWFTPAPEKEEGETDTMEGRE 493
>MATK_LYOLI (O47128) Maturase K (Intron maturase)| Length = 507 Score = 34.3 bits (77), Expect = 0.31 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R FFL+ F C ++ S FIF Sbjct: 190 WNSLITPKKSSFSFSKRNQRFLFFLYNFHLCEYE-SIFIF 228
>MATK_AUSBL (Q9TKR9) Maturase K (Intron maturase)| Length = 506 Score = 34.3 bits (77), Expect = 0.31 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDF-SFFIF 313 WN+LITP+ S +F + R FFL+ F + +W++ S F+F Sbjct: 187 WNSLITPQKSISTFSKNNPR-FFLFLFNFYVWEYESIFLF 225
>NOG2_YARLI (Q6C036) Nucleolar GTP-binding protein 2| Length = 509 Score = 33.9 bits (76), Expect = 0.41 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEIDDE 496 G + G PDE+ A+ IL D+ GKIP F PP D E Sbjct: 428 GRLLKGGEPDESGIAKLILNDFNRGKIPWFVPPPQAEDME 467
>MATK_CRAPL (Q5GAA8) Maturase K (Intron maturase)| Length = 507 Score = 33.5 bits (75), Expect = 0.53 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = +2 Query: 194 FWNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 +WN+LITP+ ++ SF + R F FL+ C +++ FF+F Sbjct: 183 YWNSLITPKKASSSFSKKNQRLFLFLYNSHVCEYEY-FFVF 222
>MATK_RHOHI (O47170) Maturase K (Intron maturase)| Length = 506 Score = 33.5 bits (75), Expect = 0.53 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSIRNQRFFLFLYNFHVCEYE-SIFVF 228
>MATK_RHOFR (O62984) Maturase K (Intron maturase)| Length = 506 Score = 33.5 bits (75), Expect = 0.53 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSIRNQRFFLFLYNFHVCEYE-SIFVF 228
>MATK_LEDPA (O62992) Maturase K (Intron maturase)| Length = 506 Score = 33.5 bits (75), Expect = 0.53 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSIRNQRFFLFLYNFHVCEYE-SIFVF 228
>MATK_STEPS (Q8WIT2) Maturase K (Intron maturase)| Length = 508 Score = 33.5 bits (75), Expect = 0.53 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSKRNQRLFLFLYNFHICEYE-SIFVF 228
>MATK_GORLA (Q8WIU9) Maturase K (Intron maturase)| Length = 508 Score = 33.5 bits (75), Expect = 0.53 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSKRNQRLFLFLYNFHICEYE-SIFVF 228
>MATK_CYRRA (Q8WIV4) Maturase K (Intron maturase)| Length = 513 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITPNKSSFSFSKRNQRLFLFLYNFHVCEYE-SIFVF 228
>MATK_CHIUM (Q71ML1) Maturase K (Intron maturase)| Length = 504 Score = 32.7 bits (73), Expect = 0.91 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIF 313 WN+L TP+ S+ SF ++R FFL+ F C ++ S F+F Sbjct: 190 WNSLTTPKKSSFSFSKXNERLFFFLYNFHVCEYE-SIFVF 228
>MATK_MANZA (Q8M9A9) Maturase K (Intron maturase)| Length = 508 Score = 32.7 bits (73), Expect = 0.91 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ + C ++ S FIF Sbjct: 190 WNSLITPKKSSFSFSKRNQRLFLFLYNYHVCEYE-SIFIF 228
>MATK_MAMHA (Q95EC9) Maturase K (Intron maturase)| Length = 510 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFF 307 WN+LITP+ S F + R F FL+ F C ++ FF Sbjct: 189 WNSLITPQKSNSIFSKRNQRLFLFLYNFHVCEYESIFF 226
>MATK_CAMSS (Q8WIV8) Maturase K (Intron maturase)| Length = 499 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ F + R F FL+ F C ++ S F+F Sbjct: 183 WNSLITPKKSSFDFSKRNQRLFLFLYNFHICEYE-SIFVF 221
>MATK_PROLU (Q7YKM5) Maturase K (Intron maturase)| Length = 500 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ ++ SF ++ R F FL+ C ++ S F+F Sbjct: 177 WNSLITPKKASSSFSKINQRLFLFLYNSHVCEYE-SIFVF 215
>MATK_PHYCU (O47135) Maturase K (Intron maturase)| Length = 506 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIFFVEP 325 WN+LIT + S SF + R F FL+ F C ++ S F+F +P Sbjct: 190 WNSLITQKKSIFSFSKKNQRFFLFLYNFHVCEYE-SIFVFLRQP 232
>MATK_SCHTR (Q95E84) Maturase K (Intron maturase)| Length = 509 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S F + R F FL+ F C ++ S F+F Sbjct: 189 WNSLITPQKSISIFSKRNQRLFLFLYNFHVCEYE-SIFVF 227
>MATK_AUSVS (Q95EE0) Maturase K (Intron maturase)| Length = 509 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S F + R F FL+ F C ++ S F+F Sbjct: 189 WNSLITPQKSISIFSKKNQRLFLFLYNFHVCEYE-SIFVF 227
>MATK_KOEPA (Q646P3) Maturase K (Intron maturase)| Length = 512 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T + R FFL+ + +++ F FF+ Sbjct: 187 WNSLITPKKSISIFSTSNPR-FFLFLYNSHVYEDEFIFFFL 226
>MATK_LYOFE (O47129) Maturase K (Intron maturase)| Length = 507 Score = 31.6 bits (70), Expect = 2.0 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIF 313 WN+L+TP+ S+ SF + R FFL+ F C ++ S F+F Sbjct: 190 WNSLMTPKKSSFSFSKRNQRFFFFLYNFYVCEYE-SIFVF 228
>NOG2_PNECA (Q9C3Z4) Nucleolar GTP-binding protein 2 (Binding-inducible GTPase)| Length = 483 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 615 GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGEID 502 G + G DE+ A+ ++ D+I GKIP F P E D Sbjct: 414 GKLLKGGEVDESSIAKMVINDFIRGKIPWFIAPAQEND 451
>RFIP4_HUMAN (Q86YS3) Rab11 family-interacting protein 4 (Rab11-FIP4)| Length = 637 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -2 Query: 337 PSDQGFHKEDEERKIPQAPPETPEE 263 P + GF EDEE + APPE P+E Sbjct: 128 PREPGFFPEDEEEAMTLAPPEGPQE 152
>MATK_VERTH (Q9TIQ5) Maturase K (Intron maturase)| Length = 509 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN LITP+ ++ SF + R F FL+ + C ++ S F+F Sbjct: 189 WNRLITPKKASSSFSKRNQRLFLFLYNYHVCEYE-SIFVF 227
>MATK_CAMSI (Q8MA31) Maturase K (Intron maturase)| Length = 499 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ F + R F FL+ F C ++ S F+F Sbjct: 183 WNSLITPKKSSFYFSKRNQRLFLFLYNFHICEYE-SIFVF 221
>MATK_GAUPR (Q95GJ0) Maturase K (Intron maturase)| Length = 506 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ + SF + + F FL+ F C ++ S F+F Sbjct: 190 WNSLITPKKYSSSFSKRNQKFFLFLYNFHVCEYE-SIFVF 228
>MATK_LOACH (Q8MD24) Maturase K (Intron maturase)| Length = 508 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ ++ SF + R FFL+ C ++ S FIF + Sbjct: 186 WNSLITPKKTSSSFSKRNQRLFFFLYNSHVCEYE-SIFIFIL 226
>MATK_GRABR (Q95EE5) Maturase K (Intron maturase)| Length = 510 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIFF 316 WN+LIT + S F + R F FL+ F C ++ S F+FF Sbjct: 190 WNSLITSQKSISIFSKRNKRLFLFLYNFHVCEYE-SIFVFF 229
>MATK_MAIPO (Q95ED6) Maturase K (Intron maturase)| Length = 511 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S F + R F FL+ F C ++ S F+F Sbjct: 189 WNSLITPQKSISFFSKRNQRLFLFLYNFYVCEYE-SIFLF 227
>MATK_ACTDE (Q95BZ7) Maturase K (Intron maturase)| Length = 504 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WNT ITP+ S+ SF + R F FL+ F C + S F+F Sbjct: 186 WNTRITPKESSFSFSKRNQRFFLFLYNFHVCESE-SIFVF 224
>MATK_ACTCH (O47141) Maturase K (Intron maturase)| Length = 504 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WNT ITP+ S+ SF + R F FL+ F C + S F+F Sbjct: 186 WNTRITPKKSSFSFSKRNQRFFLFLYNFHVCESE-SIFVF 224
>MATK_ACEPL (Q7HKI2) Maturase K (Intron maturase)| Length = 512 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T + R FFL+ + ++++ FF+ Sbjct: 187 WNSLITPKKSNSIFSTRNPR-FFLFLYNSHVYEYESIFFFL 226
>MATK_ACECA (Q8SM90) Maturase K (Intron maturase)| Length = 512 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T + R FFL+ + ++++ FF+ Sbjct: 187 WNSLITPKKSNSIFSTRNPR-FFLFLYNSHVYEYESIFFFL 226
>MATK_BARAL (Q5I6K6) Maturase K (Intron maturase)| Length = 510 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +2 Query: 194 FWNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSF 304 +WN+LITP+ ++ SF T + R F FL+ ++ SF Sbjct: 186 YWNSLITPKKASSSFSTRNQRLFVFLYNSHVSEYESSF 223
>MATK_DIOKA (Q8MA20) Maturase K (Intron maturase)| Length = 503 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ C ++ S F+F Sbjct: 186 WNSLITPKKSSFSFSKRNQRLFLFLYNSHVCEYE-SIFVF 224
>MATK_OLEEU (Q8M998) Maturase K (Intron maturase)| Length = 506 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIF 313 WN+LITP+ ++ SF + R FFL+ C ++ S F+F Sbjct: 188 WNSLITPKKASSSFSKRNQRLFFFLYNSHVCEYE-SIFVF 226
>MATK_EMPNI (Q7HTB8) Maturase K (Intron maturase)| Length = 506 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LIT + S+ SF + R F FL+ F C ++ S F+F Sbjct: 190 WNSLITQKKSSFSFSKRNQRFFLFLYNFHVCEYE-SIFVF 228
>MATK_PAUTO (Q8M930) Maturase K (Intron maturase)| Length = 511 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ ++ SF + R F FL+ C ++ S F+F Sbjct: 188 WNSLITPKKASSSFSKRNQRLFLFLYNSHVCEYE-SIFVF 226
>MATK_ACEPM (Q8WKN0) Maturase K (Intron maturase)| Length = 514 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T + R FFL+ + ++++ FF+ Sbjct: 189 WNSLITPKKSNSIFSTSNPR-FFLFLYNSHVYEYESIFFFL 228
>MATK_IBILU (Q7YKQ2) Maturase K (Intron maturase)| Length = 509 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ ++ SF + R F FL+ C ++ S F+F Sbjct: 186 WNSLITPKKASSSFSKRNQRLFLFLYNSHVCEYE-SIFVF 224
>MATK_HAMVI (Q9MT47) Maturase K (Intron maturase)| Length = 504 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIFF 316 WN+LITP+ S F + R F FL+ C ++ S F+FF Sbjct: 186 WNSLITPKKSISIFSKRNQRLFLFLYNSHVCEYE-SIFLFF 225
>MATK_HAMJA (Q9GGJ8) Maturase K (Intron maturase)| Length = 504 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIFF 316 WN+LITP+ S F + R F FL+ C ++ S F+FF Sbjct: 186 WNSLITPKKSISIFSKRNQRLFLFLYNSHVCEYE-SIFLFF 225
>GNL3_DROME (Q8MT06) Guanine nucleotide-binding protein-like 3 homolog| (Nucleostemin homolog) Length = 581 Score = 30.0 bits (66), Expect = 5.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 597 GLPDETRAARQILKDYIDGKIPHFELPP 514 G+PD AAR +L D+ GKI + PP Sbjct: 393 GVPDVVAAARSVLNDWNTGKIKYCTQPP 420
>MATK_SPAJU (Q5YK01) Maturase K (Intron maturase)| Length = 506 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN LITP+ +F H R F FL+ F C ++ S F+F Sbjct: 187 WNNLITPKKLISTFSKSHLRVFLFLYNFYVCEYE-SIFLF 225
>MATK_ARTFM (Q5GAA9) Maturase K (Intron maturase)| Length = 506 Score = 30.0 bits (66), Expect = 5.9 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ ++ SF + R F L+ C +++ FF+F Sbjct: 186 WNSLITPKKASSSFSKKNQRLFLLLYNSHVCEYEY-FFVF 224
>MATK_KIGAF (Q9TIR9) Maturase K (Intron maturase)| Length = 509 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ + SF + R F FL+ C ++ S F+F Sbjct: 186 WNSLITPKKGSSSFSKRNQRLFLFLYNSHVCEYE-SIFVF 224
>MATK_LUPAG (Q5YJU6) Maturase K (Intron maturase)| Length = 504 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN LITP+ S +F + R F FL+ F C ++ S F+F Sbjct: 187 WNNLITPKKSISTFSKSNLRVFLFLYNFYVCQYE-SIFLF 225
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 280 PETPEEEGPIMEGWKRWR*RFG 215 P TPEEEG I+ GW R+G Sbjct: 368 PATPEEEGQIIRGWLERESRYG 389
>MATK_ERITE (O47157) Maturase K (Intron maturase)| Length = 506 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ S+ SF + R F FL+ F ++ S F+F Sbjct: 190 WNSLITPKKSSFSFSKRNQRFFLFLYNFHVSEYE-SIFVF 228
>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)| Length = 635 Score = 29.6 bits (65), Expect = 7.7 Identities = 18/62 (29%), Positives = 21/62 (33%) Frame = +3 Query: 417 HQKHRRXXXXXXXXXXXXGHYCPLHQFHRLSHQEEAQSAGSFHQCNPSVSVEQPWSHQAA 596 HQ+H H H H L H A + HQ P V +Q HQ Sbjct: 267 HQQHLAGSYALDAMDSLGMH---AHMHHGLPHGHLGNLANNPHQQQPQVQQQQQQPHQQP 323 Query: 597 QH 602 QH Sbjct: 324 QH 325
>MATK_LUPCO (Q5YJV9) Maturase K (Intron maturase)| Length = 508 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN LITP+ S +F + R F FL+ F C ++ S F+F Sbjct: 189 WNNLITPKKSISTFSKSNLRVFLFLYNFYVCEYE-SIFLF 227
>MATK_OPUQU (Q95ED9) Maturase K (Intron maturase)| Length = 509 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSF-FLWGFRWCLWDFSFFIF 313 WN+LITP+ F + R F FL+ F C ++ S F+F Sbjct: 189 WNSLITPQKYISIFSKKNQRLFLFLYNFHVCEYE-SIFVF 227
>MATK_AUCJA (Q8MC94) Maturase K (Intron maturase)| Length = 504 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDR-SFFLWGFRWCLWDFSFFIF 313 WN+LITP+ + SF + R FFL+ C ++ S F+F Sbjct: 186 WNSLITPKKPSSSFSKKNQRLFFFLYNAHVCEYE-SIFVF 224
>MATK_ACEPS (Q8SE90) Maturase K (Intron maturase)| Length = 517 Score = 29.6 bits (65), Expect = 7.7 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 197 WNTLITPEPSAPSFPTLHDRSFFLWGFRWCLWDFSFFIFFV 319 WN+LITP+ S F T R FFL+ + ++++ FF+ Sbjct: 192 WNSLITPKKSNSIFSTSKPR-FFLFLYNSHVYEYESIFFFL 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,215,947 Number of Sequences: 219361 Number of extensions: 1683799 Number of successful extensions: 5344 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 5111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5341 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
