| Clone Name | rbags38a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017248.1| Zea mays clone EL01N0307C07.c mRNA sequence Length = 950 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 |||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 197 ccaggagggagctcaaagtgtgggattttaccatcaatgtaatccttcagtatctgtcga 138 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgcccccgaga 621 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 137 gcagccctggtctcatcaggcagcccagcatggctgacatgcccacgaga 88 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 230 ccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgcttg 289 ||||| || ||||||||||| || || |||||||||| |||||| ||| |||||||||| Sbjct: 476 ccatcattgccaaccctccaggaccgatccttcttccgctggggcttcttgtggtgcttg 417 Query: 290 tggga 294 ||||| Sbjct: 416 tggga 412
>gb|AY109495.1| Zea mays CL1497_1 mRNA sequence Length = 1712 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Plus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 |||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 738 ccaggagggagctcaaagtgtgggattttaccatcaatgtaatccttcagtatctgtcga 797 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgcccccgaga 621 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 798 gcagccctggtctcatcaggcagcccagcatggctgacatgcccacgaga 847 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 230 ccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgcttg 289 ||||| || ||||||||||| || || |||||||||| |||||| ||| |||||||||| Sbjct: 459 ccatcattgccaaccctccaggaccgatccttcttccgctggggcttcttgtggtgcttg 518 Query: 290 tggga 294 ||||| Sbjct: 519 tggga 523
>gb|AF124737.1|AF124737 Zea mays clone CDAPG77 unknown mRNA Length = 1694 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 |||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 975 ccaggagggagctcaaagtgtgggattttaccatcaatgtaatccttcagtatctgtcga 916 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgcccccgaga 621 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 915 gcagccctggtctcatcaggcagcccagcatggctgacatgcccacgaga 866 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 230 ccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgcttg 289 ||||| || ||||||||||| || || |||||||||| |||||| ||| |||||||||| Sbjct: 1254 ccatcattgccaaccctccaggaccgatccttcttccgctggggcttcttgtggtgcttg 1195 Query: 290 tggga 294 ||||| Sbjct: 1194 tggga 1190
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 509 tcaccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgt 568 |||||||| |||||||||||||| |||||||||||||| | |||||||||||| |||||| Sbjct: 12519 tcaccagggggaagctcaaagtgtgggatctttccatctaagtaatccttcagaatctgt 12578 Query: 569 cgagcagccctggtctcatcaggcagcccagcatggctgacatgcccccgagatgtgcag 628 | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 12579 ctagcagccctagtctcatcaggcagcccagcatgactgacatgccctcgagatgtgcag 12638 Query: 629 t 629 | Sbjct: 12639 t 12639 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 12237 tcagcgccatcatttccaaccctccatgaacgatccttcttcctctggggtttc 12290 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||||| Sbjct: 12360 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcctca 12419 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 12420 tcttgttcatcagaagca 12437
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 509 tcaccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgt 568 |||||||| |||||||||||||| |||||||||||||| | |||||||||||| |||||| Sbjct: 24778823 tcaccagggggaagctcaaagtgtgggatctttccatctaagtaatccttcagaatctgt 24778882 Query: 569 cgagcagccctggtctcatcaggcagcccagcatggctgacatgcccccgagatgtgcag 628 | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 24778883 ctagcagccctagtctcatcaggcagcccagcatgactgacatgccctcgagatgtgcag 24778942 Query: 629 t 629 | Sbjct: 24778943 t 24778943 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 24778541 tcagcgccatcatttccaaccctccatgaacgatccttcttcctctggggtttc 24778594 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||||| Sbjct: 24778664 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcctca 24778723 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 24778724 tcttgttcatcagaagca 24778741
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 509 tcaccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgt 568 |||||||| |||||||||||||| |||||||||||||| | |||||||||||| |||||| Sbjct: 64235 tcaccagggggaagctcaaagtgtgggatctttccatctaagtaatccttcagaatctgt 64294 Query: 569 cgagcagccctggtctcatcaggcagcccagcatggctgacatgcccccgagatgtgcag 628 | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 64295 ctagcagccctagtctcatcaggcagcccagcatgactgacatgccctcgagatgtgcag 64354 Query: 629 t 629 | Sbjct: 64355 t 64355 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 63953 tcagcgccatcatttccaaccctccatgaacgatccttcttcctctggggtttc 64006 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||||| Sbjct: 64076 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcctca 64135 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 64136 tcttgttcatcagaagca 64153
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 509 tcaccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgt 568 |||||||| |||||||||||||| |||||||||||||| | |||||||||||| |||||| Sbjct: 24868607 tcaccagggggaagctcaaagtgtgggatctttccatctaagtaatccttcagaatctgt 24868666 Query: 569 cgagcagccctggtctcatcaggcagcccagcatggctgacatgcccccgagatgtgcag 628 | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 24868667 ctagcagccctagtctcatcaggcagcccagcatgactgacatgccctcgagatgtgcag 24868726 Query: 629 t 629 | Sbjct: 24868727 t 24868727 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 24868325 tcagcgccatcatttccaaccctccatgaacgatccttcttcctctggggtttc 24868378 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||||| Sbjct: 24868448 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcctca 24868507 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 24868508 tcttgttcatcagaagca 24868525
>dbj|AK103649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D01, full insert sequence Length = 1907 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 509 tcaccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgt 568 |||||||| |||||||||||||| |||||||||||||| | |||||||||||| |||||| Sbjct: 1379 tcaccagggggaagctcaaagtgtgggatctttccatctaagtaatccttcagaatctgt 1320 Query: 569 cgagcagccctggtctcatcaggcagcccagcatggctgacatgcccccgagatgtgcag 628 | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1319 ctagcagccctagtctcatcaggcagcccagcatgactgacatgccctcgagatgtgcag 1260 Query: 629 t 629 | Sbjct: 1259 t 1259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1661 tcagcgccatcatttccaaccctccatgaacgatccttcttcctctggggtttc 1608 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||| | Sbjct: 1538 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcccca 1479 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 1478 tcttgttcatcagaagca 1461
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 26368684 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 26368743 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 26368744 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 26368789 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 26368403 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 26368462 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 26368463 tgtgggatgcctctttcttcttcttc 26368488
>dbj|AK103368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P14, full insert sequence Length = 1787 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 1006 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 947 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 946 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 901 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 1287 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 1228 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 1227 tgtgggatgcctctttcttcttcttc 1202
>dbj|AK101466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I12, full insert sequence Length = 2243 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 1513 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 1454 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 1453 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 1408 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 1794 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 1735 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 1734 tgtgggatgcctctttcttcttcttc 1709
>dbj|AK060811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-H01, full insert sequence Length = 1583 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 853 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 794 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 793 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 748 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 1134 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 1075 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 1074 tgtgggatgcctctttcttcttcttc 1049
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 26296853 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 26296912 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 26296913 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 26296958 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 26296572 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 26296631 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 26296632 tgtgggatgcctctttcttcttcttc 26296657
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 132668 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 132727 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 132728 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 132773 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 132387 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 132446 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 132447 tgtgggatgcctctttcttcttcttc 132472
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 512 ccaggaggaagctcaaagtgcgggatctttccatcaatgtaatccttcagtatctgtcga 571 ||||||||||| || ||||| || || || ||||| || ||||| ||||||||||||||| Sbjct: 82957 ccaggaggaagttcgaagtgtggaattttaccatcgatataatctttcagtatctgtcga 83016 Query: 572 gcagccctggtctcatcaggcagcccagcatggctgacatgccccc 617 |||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 83017 gcagccctagtctcgtcaggaagtccagcatggctaacatgccccc 83062 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 cgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttccggtggtgct 287 |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||| |||| Sbjct: 82676 cgccatcgttgccgaccctccatgaccggtccttcttcctctggggcttcttgtgctgct 82735 Query: 288 tgtgggatttttctttcttcatcttc 313 |||||||| ||||||||| ||||| Sbjct: 82736 tgtgggatgcctctttcttcttcttc 82761
>dbj|AK064308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B10, full insert sequence Length = 1485 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 224 tcagcgccatcgtttccaaccctccatgatcggtccttcttcctctggggtttc 277 ||||||||||| |||||||||||||||| || ||||||||||||||||||||| Sbjct: 1175 tcagcgccatcaattccaaccctccatgaacgatccttcttcctctggggtttc 1122 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 350 aaagatgcaaggtcgcttagggcatgactgatgttaggctcagcttgattgatgtcctcg 409 |||||| ||||||| ||||| ||||||| ||||| || ||||||||| |||| ||||| Sbjct: 1052 aaagattcaaggtcacttagtacatgactaatgtttggatcagcttgactgatttcctca 993 Query: 410 tcatcttcatcagaagca 427 || | ||||||||||||| Sbjct: 992 tcttgttcatcagaagca 975
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 558 tcagtatctgtcgagcagccctggtctcatcaggcagcccagcatg 603 ||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 47274 tcagtatctatcgagcagccctggtctcatccggcagaccagcatg 47229 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 524 tcaaagtgcgggatctttccatcaatgtaatccttcagt 562 |||||||| ||||| || ||||||||||||||||||||| Sbjct: 47524 tcaaagtgtgggattttaccatcaatgtaatccttcagt 47486
>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence Length = 115804 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 542 ccatcaatgtaatccttcagtatctgtcgagcagccctggtctcatcaggcag 594 |||||||| ||||| ||||||||||| |||| ||| ||||| ||||||||||| Sbjct: 32002 ccatcaatataatctttcagtatctgacgagaagctctggtttcatcaggcag 32054
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 542 ccatcaatgtaatccttcagtatctgtcgagcagccctggtctcatcaggcag 594 |||||||| ||||| ||||||||||| |||| ||| ||||| ||||||||||| Sbjct: 115061 ccatcaatataatctttcagtatctgacgagaagctctggtttcatcaggcag 115009
>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence Length = 117901 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 542 ccatcaatgtaatccttcagtatctgtcgagcagccctggtctcatcaggcag 594 |||||||| ||||| ||||||||||| |||| ||| ||||| ||||||||||| Sbjct: 40667 ccatcaatataatctttcagtatctgacgagaagctctggtttcatcaggcag 40615
>ref|XM_458593.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D03608g) partial mRNA Length = 3771 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 293 gatttttctttcttcatcttcttt 316 |||||||||||||||||||||||| Sbjct: 3036 gatttttctttcttcatcttcttt 3013
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 293 gatttttctttcttcatcttcttt 316 |||||||||||||||||||||||| Sbjct: 244387 gatttttctttcttcatcttcttt 244410
>ref|NM_121832.3| Arabidopsis thaliana ANAC087; transcription factor AT5G18270 (ANAC087) transcript variant AT5G18270.1 mRNA, complete cds Length = 1525 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 61 atttttctttcttcatcttctt 82
>ref|NM_203071.1| Arabidopsis thaliana ANAC087 AT5G18270 (ANAC087) transcript variant AT5G18270.2 mRNA, complete cds Length = 1525 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 61 atttttctttcttcatcttctt 82
>ref|NM_001025397.1| Canis familiaris serine peptidase inhibitor, Kazal type 5 (SPINK5), mRNA Length = 3438 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 tttctttcttcatcttctttgtggaa 322 |||||||||||||||||||| ||||| Sbjct: 2047 tttctttcttcatcttctttctggaa 2022
>ref|XM_605010.2| PREDICTED: Bos taurus similar to Serine protease inhibitor Kazal-type 5 precursor (Lympho-epithelial Kazal-type related inhibitor) (LEKTI) (LOC526637), mRNA Length = 1251 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 tttctttcttcatcttctttgtggaa 322 |||||||||||||||||||| ||||| Sbjct: 188 tttctttcttcatcttctttctggaa 163
>gb|AC144711.2| Danio rerio clone CH211-218M15, complete sequence Length = 208866 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 cacacaagcaagcaaaaactgaagca 147 ||||||||||| |||||||||||||| Sbjct: 56154 cacacaagcaatcaaaaactgaagca 56179
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence Length = 94019 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttcttt 316 |||||||||||||||||||||| Sbjct: 11579 tttttctttcttcatcttcttt 11600 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 62316 tttttctttcttcatcttctt 62336
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence Length = 109162 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttcttt 316 |||||||||||||||||||||| Sbjct: 3644 tttttctttcttcatcttcttt 3623
>emb|AJ972676.1| Canis familiaris mRNA for serine protease inhibitor Kazal-type 5 precursor (spink5 gene) Length = 3438 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 tttctttcttcatcttctttgtggaa 322 |||||||||||||||||||| ||||| Sbjct: 2047 tttctttcttcatcttctttctggaa 2022
>gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-319O9, complete sequence Length = 187615 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 128755 atttttctttcttcatcttctt 128734
>gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete sequence Length = 176008 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 tgggatttttctttcttcatcttctt 315 |||||||||||||||||| ||||||| Sbjct: 154800 tgggatttttctttcttcttcttctt 154775
>emb|BX832112.1|CNS0A15G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 35 atttttctttcttcatcttctt 56
>gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complete sequence Length = 132623 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 tgggatttttctttcttcatcttctt 315 |||||||||||||||||| ||||||| Sbjct: 105015 tgggatttttctttcttcttcttctt 104990
>gb|BT005713.1| Arabidopsis thaliana clone RAFL14-80-C22 (R20123) putative NAM (no apical meristem) protein (At5g18270) mRNA, complete cds Length = 1540 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 61 atttttctttcttcatcttctt 82
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7 Length = 83948 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 66384 atttttctttcttcatcttctt 66363
>gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-520K18, complete sequence Length = 160299 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 atttttctttcttcatcttctt 315 |||||||||||||||||||||| Sbjct: 122863 atttttctttcttcatcttctt 122842
>emb|CR848705.13| Zebrafish DNA sequence from clone DKEY-8O15 in linkage group 11, complete sequence Length = 261584 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 cacacaagcaagcaaaaactgaagca 147 ||||||||||| |||||||||||||| Sbjct: 109126 cacacaagcaatcaaaaactgaagca 109151
>gb|AC005962.1|AC005962 Homo sapiens chromosome 17, clone hRPK.506_H_21, complete sequence Length = 162083 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttcttt 316 |||||||||||||||||||||| Sbjct: 82065 tttttctttcttcatcttcttt 82044
>emb|CT009620.9| Zebrafish DNA sequence from clone CH73-187F10 in linkage group 6, complete sequence Length = 95528 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 65487 tttttctttcttcatcttctt 65467
>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE Length = 111128 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 97374 tttttctttcttcatcttctt 97394
>emb|Z46812.1|CEZK675 Caenorhabditis elegans Cosmid ZK675, complete sequence Length = 22703 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ctcgtcatcttcatcagaagcatcg 430 ||||||||||||||||||| ||||| Sbjct: 7335 ctcgtcatcttcatcagaatcatcg 7311
>gb|AC152068.17| Medicago truncatula clone mth2-29p8, complete sequence Length = 118589 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 91664 tttttctttcttcatcttctt 91644
>emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L12 on chromosome Xq13.1-21.1 Contains the PGK1 gene for phosphoglycerate kinase 1, the TAF9L gene for TAF9-like RNA polymerase II TATA box binding protein (TBP)-associated factor 31kDa, a novel pseudogene and a CpG island, complete sequence Length = 143508 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttcttt 316 ||||||||||||||||||||| Sbjct: 18508 ttttctttcttcatcttcttt 18528
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tttctttcttcatcttctttg 317 ||||||||||||||||||||| Sbjct: 84949 tttctttcttcatcttctttg 84929
>ref|NM_063261.2| Caenorhabditis elegans PaTChed family member (ptc-1) (ptc-1) mRNA, complete cds Length = 4995 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ctcgtcatcttcatcagaagcatcg 430 ||||||||||||||||||| ||||| Sbjct: 4110 ctcgtcatcttcatcagaatcatcg 4086
>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence Length = 221109 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gggatttttctttcttcatcttctt 315 ||||||||||||||||| ||||||| Sbjct: 61614 gggatttttctttcttcttcttctt 61638
>gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J12 map 3p, complete sequence Length = 204797 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 10485 tttttctttcttcatcttctt 10465
>gb|AC026179.5|AC026179 Homo sapiens chromosome 3 clone RP11-264H3 map 3p, complete sequence Length = 166488 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 100564 tttttctttcttcatcttctt 100584
>gb|AC066584.6|AC066584 Homo sapiens chromosome 3 clone RP11-244G3 map 3p, complete sequence Length = 155825 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 24723 tttttctttcttcatcttctt 24743
>emb|BX005417.13| Zebrafish DNA sequence from clone DKEY-240N22, complete sequence Length = 175997 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 cagcatggctgacatgccccc 617 ||||||||||||||||||||| Sbjct: 61442 cagcatggctgacatgccccc 61462
>gb|U22665.1|BNU22665 Brassica napus AGL15 gene, complete cds Length = 2679 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttcttt 316 ||||||||||||||||||||| Sbjct: 946 ttttctttcttcatcttcttt 966
>gb|AC069277.6| Homo sapiens chromosome 3 clone RP11-529B17 map 3p, complete sequence Length = 159908 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 148625 tttttctttcttcatcttctt 148645
>gb|AC023485.6| Homo sapiens chromosome 3 clone RP11-489D19 map 3p, complete sequence Length = 179304 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctt 315 ||||||||||||||||||||| Sbjct: 48196 tttttctttcttcatcttctt 48216
>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence Length = 188708 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tttctttcttcatcttcttt 316 |||||||||||||||||||| Sbjct: 63522 tttctttcttcatcttcttt 63503
>ref|NM_004728.2| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (DDX21), mRNA Length = 4153 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 500 ttttctttcttcatcttctt 481
>ref|NM_116639.1| Arabidopsis thaliana cysteine-type peptidase AT4G04010 mRNA, complete cds Length = 2511 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 1176 ttttctttcttcatcttctt 1157
>ref|NM_180596.1| Arabidopsis thaliana unknown protein AT5G55920 mRNA, complete cds Length = 2372 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 tcgtcatcttcatcagaagcatcg 430 |||||||||||||||||| ||||| Sbjct: 294 tcgtcatcttcatcagaatcatcg 271
>gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, complete sequence Length = 145479 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ggatttttctttcttcatcttctt 315 ||||||||||||||| |||||||| Sbjct: 128079 ggatttttctttcttaatcttctt 128102
>ref|XM_633848.1| Dictyostelium discoideum microtubule-associated protein (DDB0191160), partial mRNA Length = 1521 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gtcatcttcatcagaagcat 428 |||||||||||||||||||| Sbjct: 1461 gtcatcttcatcagaagcat 1442
>ref|XM_507825.1| PREDICTED: Pan troglodytes similar to Gu protein (LOC450500), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 659 ttttctttcttcatcttctt 640
>ref|XM_471672.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5313 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcctcgtcatcttcatcaga 423 |||||||||||||||||||| Sbjct: 1278 tcctcgtcatcttcatcaga 1297
>ref|XM_519227.1| PREDICTED: Pan troglodytes similar to Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) (LOC463564), mRNA Length = 12780 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 ctggtctcatcaggcagcccagca 601 |||||| ||||||||||||||||| Sbjct: 9240 ctggtcccatcaggcagcccagca 9263
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 gtcctctgcatcagtttcatcgtc 504 |||||||||||||| ||||||||| Sbjct: 1659472 gtcctctgcatcagattcatcgtc 1659495
>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete sequence Length = 102431 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 8639 gatttttctttcttcatctt 8620
>gb|BC077050.1| Xenopus tropicalis MGC89973 protein, mRNA (cDNA clone MGC:89973 IMAGE:7025892), complete cds Length = 555 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tcactattgtcctctgcatc 492 |||||||||||||||||||| Sbjct: 285 tcactattgtcctctgcatc 266
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ggatttttctttcttcatcttctt 315 ||||||||||||||| |||||||| Sbjct: 80756 ggatttttctttcttaatcttctt 80779
>gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete sequence Length = 158491 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 54363 ttgattgttgtcctcgtcatcatcatca 54336
>gb|BC008071.2| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 21, mRNA (cDNA clone MGC:2857 IMAGE:2987980), complete cds Length = 3301 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 451 ttttctttcttcatcttctt 432
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 7502 gatttttctttcttcatctt 7521
>gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome 7, complete sequence Length = 210291 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tttcttcatcttctttgtgg 320 |||||||||||||||||||| Sbjct: 47979 tttcttcatcttctttgtgg 47998
>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence Length = 170323 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tttctttcttcatcttcttt 316 |||||||||||||||||||| Sbjct: 40706 tttctttcttcatcttcttt 40725
>gb|AC147624.2| Mus musculus BAC clone RP24-329I13 from chromosome 18, complete sequence Length = 176258 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acaagcaagcaaaaactgaa 144 |||||||||||||||||||| Sbjct: 33809 acaagcaagcaaaaactgaa 33790
>ref|XM_569763.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal large subunit biogenesis-related protein (CNC05560) partial mRNA Length = 1581 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 gtcctctgcatcagtttcatcgtc 504 |||||||||||||| ||||||||| Sbjct: 905 gtcctctgcatcagattcatcgtc 882
>gb|AC130718.3| Mus musculus BAC clone RP23-467A8 from chromosome 18, complete sequence Length = 178023 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acaagcaagcaaaaactgaa 144 |||||||||||||||||||| Sbjct: 175683 acaagcaagcaaaaactgaa 175664
>gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosome 7, complete sequence Length = 163138 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tttcttcatcttctttgtgg 320 |||||||||||||||||||| Sbjct: 53246 tttcttcatcttctttgtgg 53227
>gb|AC131684.4| Mus musculus BAC clone RP23-371K6 from chromosome 10, complete sequence Length = 190874 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 acacaagcaagcaaaaactg 142 |||||||||||||||||||| Sbjct: 182432 acacaagcaagcaaaaactg 182451
>gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosome 10, complete sequence Length = 162676 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 120328 gatttttctttcttcatctt 120347
>ref|XM_846653.1| PREDICTED: Canis familiaris similar to Nucleolar RNA helicase II (Nucleolar RNA helicase Gu) (RH II/Gu) (DEAD-box protein 21) (LOC476891), mRNA Length = 2947 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 413 ttttctttcttcatcttctt 394
>gb|AC133212.2| Mus musculus chromosome UNK clone RP23-45E17, complete sequence Length = 141857 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttctttgtg 319 ||||| |||||||||||||||||| Sbjct: 44427 ttttccttcttcatcttctttgtg 44450
>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence Length = 138853 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 57527 ttttctttcttcatcttctt 57546
>emb|AL359844.15| Human DNA sequence from clone RP11-314J18 on chromosome 10 Contains the gene for a novel protein (FLJ25162), the GU2 gene for nucleolar protein GU2 (GUB, MGC3199, RH-II/GuB), the DDX21 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21 (GUA, GURDB, RH-II/GU, RH-II/GuA), the gene for a novel protein (DKFZP586B0923)(KIAA1279), an endothelial-derived gene 1 (EG1)(EG-1, DKFZP434N185) pseudogene, an actin, beta (ACTB) pseudogene and three CpG islands, complete sequence Length = 171364 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 101690 ttttctttcttcatcttctt 101671
>emb|AL138830.20| Human DNA sequence from clone RP3-399L15 on chromosome 6q21-22.2 Contains 2 putative novel genes, complete sequence Length = 141924 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttctttgt 318 ||||||||||||||||||| |||| Sbjct: 125842 tttttctttcttcatcttcattgt 125819
>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete sequence Length = 175382 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tttctttcttcatcttcttt 316 |||||||||||||||||||| Sbjct: 133780 tttctttcttcatcttcttt 133761
>gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence Length = 220468 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctttgtg 319 ||||| |||||||||||||||||| Sbjct: 141098 ttttccttcttcatcttctttgtg 141075
>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21, complete sequence Length = 151218 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcctcgtcatcttcatcaga 423 |||||||||||||||||||| Sbjct: 112047 tcctcgtcatcttcatcaga 112066
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11 Length = 198022 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 42987 ttttctttcttcatcttctt 43006
>emb|AL034583.1|SPAC637 S.pombe chromosome I cosmid c637 Length = 35905 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tacaacgctagtgctactgg 173 |||||||||||||||||||| Sbjct: 28138 tacaacgctagtgctactgg 28119
>emb|AJ426053.1|DDI426053 Dictyostelium discoideum mRNA for EB1 protein Length = 1668 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gtcatcttcatcagaagcat 428 |||||||||||||||||||| Sbjct: 1477 gtcatcttcatcagaagcat 1458
>emb|CR749598.1| Homo sapiens mRNA; cDNA DKFZp686F21172 (from clone DKFZp686F21172) Length = 3481 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 633 ttttctttcttcatcttctt 614
>gb|AY113434.1| Drosophila melanogaster RE25878 full insert cDNA Length = 3927 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 3095 ttgattgttgtcctcgtcatcatcatca 3068
>ref|NM_166372.1| Drosophila melanogaster hiiragi CG9854-RB, transcript variant B (hrg), mRNA Length = 3601 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 2783 ttgattgttgtcctcgtcatcatcatca 2756
>ref|NM_080529.2| Drosophila melanogaster hiiragi CG9854-RA, transcript variant A (hrg), mRNA Length = 3904 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 3086 ttgattgttgtcctcgtcatcatcatca 3059
>gb|AF481104.1| Mentha longifolia clone 17-1 NBS-LRR-like protein gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 attttccatccaaacatcat 73 |||||||||||||||||||| Sbjct: 228 attttccatccaaacatcat 209
>gb|L80214.1|HUM69DC4Z Homo sapiens (subclone 1_d1 from P1 H69) DNA sequence Length = 3060 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 645 gatttttctttcttcatctt 626
>gb|AY065017.1| Arabidopsis thaliana AT5g55920/MYN21_3 mRNA sequence Length = 2373 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 tcgtcatcttcatcagaagcatcg 430 |||||||||||||||||| ||||| Sbjct: 294 tcgtcatcttcatcagaatcatcg 271
>gb|AC182809.1| Gasterosteus aculeatus clone VMRC28-105K14, complete sequence Length = 134684 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 295 tttttctttcttcatcttctttgtggaa 322 ||||||||||||||||||| | |||||| Sbjct: 30885 tttttctttcttcatcttcctagtggaa 30912
>emb|BX296525.5| Zebrafish DNA sequence from clone CH211-252F24 in linkage group 10, complete sequence Length = 160412 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tcctctgcatcagtttcatc 501 |||||||||||||||||||| Sbjct: 30511 tcctctgcatcagtttcatc 30530
>gb|AC154603.3| Mus musculus BAC clone RP23-344D21 from chromosome 13, complete sequence Length = 216297 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ggatttttctttcttcatcttctt 315 |||||||||||||||| ||||||| Sbjct: 116422 ggatttttctttcttcttcttctt 116445
>ref|NM_001020059.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC637.13c), partial mRNA Length = 1497 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 tacaacgctagtgctactgg 173 |||||||||||||||||||| Sbjct: 1456 tacaacgctagtgctactgg 1475
>dbj|AK038023.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130072F03 product:unclassifiable, full insert sequence Length = 2046 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 ggatttttctttcttcatcttctt 315 ||||||||||||||| |||||||| Sbjct: 927 ggatttttctttcttaatcttctt 904
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcctcgtcatcttcatcaga 423 |||||||||||||||||||| Sbjct: 13118234 tcctcgtcatcttcatcaga 13118253
>gb|AF261904.1|H009497S03 Homo sapiens RNA helicase II/Gu protein gene, exon 2 Length = 1053 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 784 ttttctttcttcatcttctt 765
>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23, complete sequence Length = 165683 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcctcgtcatcttcatcaga 423 |||||||||||||||||||| Sbjct: 50444 tcctcgtcatcttcatcaga 50463
>gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, complete sequence Length = 159512 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tttcttcatcttctttgtgg 320 |||||||||||||||||||| Sbjct: 1877 tttcttcatcttctttgtgg 1858
>ref|NM_001005113.1| Xenopus tropicalis MGC89973 protein (MGC89973), mRNA Length = 555 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tcactattgtcctctgcatc 492 |||||||||||||||||||| Sbjct: 285 tcactattgtcctctgcatc 266
>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168134 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tttttctttcttcatcttct 314 |||||||||||||||||||| Sbjct: 96375 tttttctttcttcatcttct 96356
>ref|XM_215003.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 3200002M19 (predicted) (LOC293155), mRNA Length = 843 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 tgtcctcgtcatcttcatca 421 |||||||||||||||||||| Sbjct: 394 tgtcctcgtcatcttcatca 375
>gb|AC079865.14| Homo sapiens 12 BAC RP11-745I6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163494 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ggatttttctttcttcatcttctt 315 |||||||| ||||||||||||||| Sbjct: 34886 ggatttttttttcttcatcttctt 34909
>gb|AF231704.1| Drosophila melanogaster poly A polymerase mRNA, complete cds Length = 3835 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 3057 ttgattgttgtcctcgtcatcatcatca 3030
>emb|BX648405.1|HSM808553 Homo sapiens mRNA; cDNA DKFZp686A04240 (from clone DKFZp686A04240) Length = 4614 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 399 ttttctttcttcatcttctt 380
>dbj|AB026659.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN21 Length = 28207 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 tcgtcatcttcatcagaagcatcg 430 |||||||||||||||||| ||||| Sbjct: 11681 tcgtcatcttcatcagaatcatcg 11704
>gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q21.1-q31.1, complete sequence Length = 103738 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 ctggtctcatcaggcagcccagca 601 |||||| ||||||||||||||||| Sbjct: 24659 ctggtcccatcaggcagcccagca 24682
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 tgcaatacttgagccttctt 470 |||||||||||||||||||| Sbjct: 1710191 tgcaatacttgagccttctt 1710210
>emb|CR392341.14| Zebrafish DNA sequence from clone CH211-222E20 in linkage group 10, complete sequence Length = 208667 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tcctctgcatcagtttcatc 501 |||||||||||||||||||| Sbjct: 189726 tcctctgcatcagtttcatc 189707
>gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55 of 73 of the complete sequence Length = 248096 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 209865 ttgattgttgtcctcgtcatcatcatca 209892
>emb|CR760469.2| Xenopus tropicalis finished cDNA, clone TNeu079b06 Length = 546 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tcactattgtcctctgcatc 492 |||||||||||||||||||| Sbjct: 267 tcactattgtcctctgcatc 248
>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence Length = 242324 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 132643 ttttctttcttcatcttctt 132662
>gb|BT001541.1| Drosophila melanogaster RE09914 full insert cDNA Length = 3608 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 2784 ttgattgttgtcctcgtcatcatcatca 2757
>gb|AC004563.1|AC004563 Drosophila melanogaster DNA sequence (P1 DS06300 (D178)), complete sequence Length = 74717 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 6826 ttgattgttgtcctcgtcatcatcatca 6799
>gb|AC002365.1|AC002365 Homo sapiens chromosome X clone U177G4, U152H5, U168D5, 174A6, U172D6, and U186B3 from Xp22, complete sequence Length = 196542 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tgtgggatttttctttcttc 307 |||||||||||||||||||| Sbjct: 164950 tgtgggatttttctttcttc 164969
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 Length = 88848 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 74448 ttttctttcttcatcttctt 74429
>emb|AL928791.10| Mouse DNA sequence from clone RP23-65N20 on chromosome 2, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tccatcaatgtaatccttca 560 |||||||||||||||||||| Sbjct: 153429 tccatcaatgtaatccttca 153410
>gb|BC004182.2| Homo sapiens cDNA clone IMAGE:2961423, containing frame-shift errors Length = 3292 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 444 ttttctttcttcatcttctt 425
>gb|BC017228.2| Homo sapiens cDNA clone IMAGE:4122673, containing frame-shift errors Length = 3292 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 444 ttttctttcttcatcttctt 425
>gb|BC009432.1| Homo sapiens cDNA clone IMAGE:3355439, containing frame-shift errors Length = 3313 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 466 ttttctttcttcatcttctt 447
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tctttcttcatcttctttgt 318 |||||||||||||||||||| Sbjct: 109193 tctttcttcatcttctttgt 109174
>gb|L81904.1|HSL81904 Homo sapiens (subclone 1_h7 from P1 H69) DNA sequence, complete sequence Length = 2976 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 960 gatttttctttcttcatctt 979
>gb|AC001215.1|HSAC001215 Homo sapiens (subclone 1_d1 from P1 H69) DNA sequence, complete sequence Length = 3060 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gatttttctttcttcatctt 312 |||||||||||||||||||| Sbjct: 645 gatttttctttcttcatctt 626
>gb|U41387.1|HSU41387 Human Gu protein mRNA, partial cds Length = 3288 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttttctttcttcatcttctt 315 |||||||||||||||||||| Sbjct: 464 ttttctttcttcatcttctt 445
>emb|AJ294932.1|TPE294932 Therea petiveriana partial 16S rRNA gene Length = 406 Score = 40.1 bits (20), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 acaacatagnagaaatgtttttg 28 ||||||||| ||||||||||||| Sbjct: 373 acaacatagaagaaatgtttttg 395
>dbj|AB018431.1| Drosophila melanogaster PAP mRNA for poly A polymerase, complete cds, clone:LD05439 Length = 3482 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 3087 ttgattgttgtcctcgtcatcatcatca 3060
>dbj|AB018430.1| Drosophila melanogaster PAP mRNA for poly A polymerase, partial cds, clone:c3 Length = 2567 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 394 ttgattgatgtcctcgtcatcttcatca 421 ||||||| ||||||||||||| |||||| Sbjct: 1749 ttgattgttgtcctcgtcatcatcatca 1722
>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete sequence Length = 111339 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tttctttcttcatcttcttt 316 |||||||||||||||||||| Sbjct: 26448 tttctttcttcatcttcttt 26467 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,791,130 Number of Sequences: 3902068 Number of extensions: 6791130 Number of successful extensions: 167725 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167228 Number of HSP's gapped (non-prelim): 497 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)