| Clone Name | rbags38a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 1059 bits (534), Expect = 0.0 Identities = 543/545 (99%), Gaps = 1/545 (0%) Strand = Plus / Minus Query: 7 ctctgatttnataagnaactatagaaacattaatgcacaatcttcactcaaccttaggtc 66 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1959 ctctgatttcataag-aactatagaaacattaatgcacaatcttcactcaaccttaggtc 1901 Query: 67 tgcatcactctaatggcaagactaggtacatcttatttcttatcagaaacggcaagcagg 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1900 tgcatcactctaatggcaagactaggtacatcttatttcttatcagaaacggcaagcagg 1841 Query: 127 acaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgatcatcctcggc 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1840 acaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgatcatcctcggc 1781 Query: 187 ttcttgctggttcctgccatgatggttgctgggagatgctcctgctcataggccgagaga 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1780 ttcttgctggttcctgccatgatggttgctgggagatgctcctgctcataggccgagaga 1721 Query: 247 tggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccac 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1720 tggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccac 1661 Query: 307 tctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgcc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1660 tctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgcc 1601 Query: 367 gagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtc 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1600 gagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtc 1541 Query: 427 ggggtgttgtgtgggtaaatgaacttcgcatttgacatcatcttatcggtcacatttgat 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1540 ggggtgttgtgtgggtaaatgaacttcgcatttgacatcatcttatcggtcacatttgat 1481 Query: 487 tctgtgtgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctct 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 tctgtgtgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctct 1421 Query: 547 ttctg 551 ||||| Sbjct: 1420 ttctg 1416
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 878 bits (443), Expect = 0.0 Identities = 519/542 (95%), Gaps = 2/542 (0%) Strand = Plus / Minus Query: 11 gatttnataagnaactatagaaacattaatgcacaatcttcactcaa-ccttaggtctgc 69 ||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1940 gatttcataag-aacaatagaaacattaatgcacaatcttcactcaaaccttaggtctgc 1882 Query: 70 atcactctaatggcaagactaggtacatcttatttcttatcagaaacggcaagcaggaca 129 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1881 accactctaatggcaagaccaggtacatcttatttcttatcagaaacggcaagcaggaca 1822 Query: 130 ggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgatcatcctcggcttc 189 |||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| Sbjct: 1821 ggacaccatcaactctcaattgcgacaccaggcgccgcaacctcgatcatccttggcttc 1762 Query: 190 ttgctggttcctgccatgatggttgctgggagatgctcctgctcataggccgagagatgg 249 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1761 ttgctggttcctgccatgatggttgctgggagatgctcctgttcataggccgagagatgg 1702 Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 1701 actccaagtgctgctctccctgagggatccaggttccctgaccactgggcatcccactct 1642 Query: 310 actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 369 || |||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1641 accgccttcgccgtgctgcatgcaacgcttggcccacctggcaccgtcaggatcgccgag 1582 Query: 370 ttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtcggg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1581 ttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtcggg 1522 Query: 430 gtgttgtgtgggtaaatgaacttcgcatttgacatcatcttatcggtcacatttgattct 489 |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1521 gtgttgtgtgggtagatgaactttgcatttgacatcatcttatctgtcacatttgattct 1462 Query: 490 gtgtgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttc 549 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 gcgtgagcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttc 1402 Query: 550 tg 551 || Sbjct: 1401 tg 1400
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 728 bits (367), Expect = 0.0 Identities = 418/435 (96%) Strand = Plus / Minus Query: 117 ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgat 176 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1800 ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggcgccgcaacctcgat 1741 Query: 177 catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgctcata 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1740 catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgttcata 1681 Query: 237 ggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccg 296 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1680 ggccgagagatggactccaagtgctgctctccctgagggatccaggttccctgaccactg 1621 Query: 297 agcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgt 356 |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 1620 ggcatcccactctaccgccttcgccgtgctgcatgcaacgcttggcccacctggcaccgt 1561 Query: 357 caggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctc 416 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1560 caggatcgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctc 1501 Query: 417 ttttgtagtcggggtgttgtgtgggtaaatgaacttcgcatttgacatcatcttatcggt 476 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1500 ttttgtagtcggggtgttgtgtgggtagatgaactttgcatttgacatcatcttatctgt 1441 Query: 477 cacatttgattctgtgtgggcctttaggccatcaatccagctgtagccaacaccatcact 536 |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1440 cacattcgattctgcgtgagcctttaggccatcaatccagctgtagccaacaccatcact 1381 Query: 537 gaactgctctttctg 551 ||||||||||||||| Sbjct: 1380 gaactgctctttctg 1366
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 321 bits (162), Expect = 1e-84 Identities = 285/326 (87%) Strand = Plus / Minus Query: 226 tcctgctcataggccgagagatggactccaagtgctgctctccctgagggatccaggttc 285 |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 1670 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1611 Query: 286 cccgaccaccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccg 345 || |||||| | || |||||||||| |||||| || |||||||| || |||||||||||| Sbjct: 1610 ccagaccactgcgcgtcccactctattgccttggctgtgctgcacgccacgcttggcccg 1551 Query: 346 cctggcactgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaa 405 |||||||| || ||||| |||||| |||| |||||| ||||||| || |||||||||||| Sbjct: 1550 cctggcaccgtgaggatcgccgagctctgagggaagtacctctcgaagatcatcctgtaa 1491 Query: 406 cagtaggcctcttttgtagtcggggtgttgtgtgggtaaatgaacttcgcatttgacatc 465 ||||||||||||| || || ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 1490 tagtaggcctctttagttgttggggtgttgtgtgggtagatgaactttgcattggacatc 1431 Query: 466 atcttatcggtcacatttgattctgtgtgggcctttaggccatcaatccagctgtagcca 525 |||||||| ||||||||||| ||| || |||| ||||||||||||||||| || ||| Sbjct: 1430 atcttatcactcacatttgatgctgcatgatccttaaggccatcaatccagctataccca 1371 Query: 526 acaccatcactgaactgctctttctg 551 ||||||||||| |||||||| ||||| Sbjct: 1370 acaccatcactaaactgctccttctg 1345
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 321 bits (162), Expect = 1e-84 Identities = 285/326 (87%) Strand = Plus / Minus Query: 226 tcctgctcataggccgagagatggactccaagtgctgctctccctgagggatccaggttc 285 |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 1739 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1680 Query: 286 cccgaccaccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccg 345 || ||||| | ||||||||||||| ||||| || |||||||| || |||||||||||| Sbjct: 1679 ccagaccattgggcatcccactctatagccttggctgtgctgcacgccacgcttggcccg 1620 Query: 346 cctggcactgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaa 405 |||||||| || ||||| |||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 1619 cctggcaccgtgaggatcgccgagctctgggggaagtacctctcaaagatcatcctgtaa 1560 Query: 406 cagtaggcctcttttgtagtcggggtgttgtgtgggtaaatgaacttcgcatttgacatc 465 ||||||||||||| || || ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 1559 tagtaggcctctttagttgttggggtgttgtgtgggtagatgaactttgcattggacatc 1500 Query: 466 atcttatcggtcacatttgattctgtgtgggcctttaggccatcaatccagctgtagcca 525 |||||||| |||||||||| ||| || |||| ||||||||||||||||| || ||| Sbjct: 1499 atcttatcactcacatttgaggctgcatgatccttcaggccatcaatccagctataccca 1440 Query: 526 acaccatcactgaactgctctttctg 551 ||||||||||| |||||||| ||||| Sbjct: 1439 acaccatcactaaactgctccttctg 1414
>gb|AY108716.1| Zea mays PCO093600 mRNA sequence Length = 673 Score = 165 bits (83), Expect = 2e-37 Identities = 200/239 (83%) Strand = Plus / Minus Query: 313 gccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgagttc 372 ||||| || |||||||| || || |||||||| || || || |||||||| || || ||| Sbjct: 560 gccttggctgtgctgcacgccacacttggcccaccaggtaccgtcaggatagcagatttc 501 Query: 373 tgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtcggggtg 432 || |||||||||||||| || | ||||||||| |||||||||| || || ||||| ||| Sbjct: 500 tgtgggaagaacctctcgaagaccatcctgtagtagtaggcctccttggtggtcggagtg 441 Query: 433 ttgtgtgggtaaatgaacttcgcatttgacatcatcttatcggtcacatttgattctgtg 492 ||||||||| | |||||||| |||||||||| |||||| || |||||||||||| || Sbjct: 440 ttgtgtgggaagatgaactttgcatttgacagcatcttgtcagtcacatttgatgttgca 381 Query: 493 tgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 || ||||| |||||||| ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 380 tgagccttcaggccatcgatccagctgtacccaacgccgtcactgaactgctccttctg 322
>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase Length = 2085 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 492 gtgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1439 gtgggctttgaggccatcgatccagctgtagccaacaccatcactaaactgctctttctg 1380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 362 ttgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 419 ||||||||||||| ||||||||||||||||| ||||| |||||| |||| || ||||| Sbjct: 1569 ttgccgagttctgtgggaagaacctctcaaagatcattctgtaatagtatgcttcttt 1512
>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds Length = 1931 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1402 aggccatcaatccagctatagccaacaccatcactgaactgttctttctg 1353 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 362 ttgccgagttctgggggaagaacctctcaaatatcatcctgta 404 |||| |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1542 ttgctgagttctgagggaagaacctctcaaagatcattctgta 1500
>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds Length = 2088 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 493 tgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| || |||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1458 tgggctttgaggccatcgatccagctgtacccaacaccatcactaaactgctctttctg 1400 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 362 ttgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 419 ||||||||||||| |||||||||||||| || ||||| |||||| |||| || ||||| Sbjct: 1589 ttgccgagttctgtgggaagaacctctcgaagatcattctgtaatagtaagcttcttt 1532
>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.1 mRNA, complete cds Length = 2206 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1593 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1544 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1728 gagttctgcgggaagaacctttcaaagatcattctgta 1691
>ref|NM_180332.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.2 mRNA, complete cds Length = 2299 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1593 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1544
>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.3 mRNA, complete cds Length = 2380 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1676 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1627 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1902 gagttctgcgggaagaacctttcaaagatcattctgta 1865
>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 1786 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1394 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1345 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1529 gagttctgcgggaagaacctttcaaagatcattctgta 1492
>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 2183 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1595 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1546 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1730 gagttctgcgggaagaacctttcaaagatcattctgta 1693
>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8 Length = 87224 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 38102 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 38151
>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds Length = 2123 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1590 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1541 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1725 gagttctgcgggaagaacctttcaaagatcattctgta 1688
>emb|BX824817.1|CNS0A4VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2052 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1572 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1523
>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine synthetase mRNA, complete cds Length = 1755 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1394 aggccatcgatccaactgtagccaacaccatcactgaactgttctttctg 1345 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1529 gagttctgcgggaagaacctttcaaagatcattctgta 1492
>ref|NM_121062.2| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.1 mRNA, complete cds Length = 2018 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1443 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1391
>ref|NM_001036787.1| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.2 mRNA, complete cds Length = 2028 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1442 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1390
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 73.8 bits (37), Expect = 5e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 246 atggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatccca 305 |||||| || || ||||||||||| || ||||||| || |||||| ||||| ||||| Sbjct: 1705 atggacgccgagagctgctctccccgacggatccaaattgttcgaccagcgagcgtccca 1646 Query: 306 ctctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgc 365 || | ||||||||||||||||| || | |||||| || || || || || | | || Sbjct: 1645 ttcgatagccttcgccgtgctgcaagcaatgcttggacctccagggacagtaaatctcgc 1586 Query: 366 cgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagt 425 ||||||||| ||||||||||| ||||| ||||| ||||| | || ||||||||||| || Sbjct: 1585 cgagttctgagggaagaacctttcaaagatcattctgtagtaataagcctcttttgtggt 1526 Query: 426 cggggtgttgtgtgggtaaat 446 || |||||||| |||||||| Sbjct: 1525 tggtgtgttgtgggggtaaat 1505 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||| || ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1455 gccttcagcccatcaatccaactatatccaacaccatcactgaactgctc 1406
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 18256 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 18308
>gb|AF095452.1|AF095452 Arabidopsis thaliana asparagine synthetase (ASN3) mRNA, complete cds Length = 1986 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1397 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1345
>emb|BX830209.1|CNS09YW6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1403 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1351
>gb|BT005014.1| Arabidopsis thaliana clone U20709 putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 1768 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1397 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1345
>gb|BT003929.1| Arabidopsis thaliana clone RAFL15-17-K18 (R20709) putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 2026 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1443 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 1391
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 499 tttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 78158 tttagaccatcaatccagctgtatccaactccatcactgaactgttctttctg 78210
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| |||||||| |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 10093209 gccttcaggccatcgatccagttgtagccgacgccatcactgaactgctctttctg 10093264
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| |||||||| |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 38830 gccttcaggccatcgatccagttgtagccgacgccatcactgaactgctctttctg 38885
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| |||||||| |||||| ||||||| || ||||||||||||||||||||||| Sbjct: 10091330 gccttcaggccatcgatccagttgtagccgacgccatcactgaactgctctttctg 10091385
>gb|AF005724.1| Sandersonia aurantiaca asparagine synthetase (SAND1) mRNA, complete cds Length = 2121 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1442 gccttaagtccatcaatccagctgtagccaactccatcactaaactgttctttctg 1387
>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene) Length = 2110 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 297 agcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgt 356 ||||||||| || |||||||| || ||||| || || |||||||||||||| || || || Sbjct: 1691 agcatcccattccactgcctttgcggtgctacaagccacgcttggcccgcccgggaccgt 1632 Query: 357 caggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctc 416 || ||||| |||||| || |||| || ||||||||||||||||| |||| ||||| Sbjct: 1631 caaccgtgccgcgttctgaggatagaatctttcaaatatcatcctgtagtagtacgcctc 1572 Query: 417 ttttgtagt 425 |||||||| Sbjct: 1571 ctttgtagt 1563 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 504 gccatcaatccagctgtagccaacaccatcactgaa 539 |||||||||||||||||||||||| ||||| ||||| Sbjct: 1484 gccatcaatccagctgtagccaaccccatcgctgaa 1449
>ref|XM_656913.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4401.2), mRNA Length = 1716 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 492 gtgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||| |||| || ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1488 gtggtccttcagaccatcgatccagctgtagccgacaccgtcactgaactgctccttctg 1429
>gb|BT013473.1| Lycopersicon esculentum clone 132134R, mRNA sequence Length = 1923 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 504 gccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 1458 gccatcaatccaactgtagccaactccatcactgaactgttccttctg 1411
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 364 gccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 419 ||||||||||| || |||||||||||||| |||||||||||| | ||||| ||||| Sbjct: 1676 gccgagttctgaggaaagaacctctcaaagatcatcctgtaataataggcttcttt 1621 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| | |||||||| ||||||||||| || |||||||| Sbjct: 1535 ccatcaatccaaccatagccaactccatcactgaattgttctttctg 1489
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||| |||||||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 1419 gccttaaggccatcaatccaactatagccaactccatcactgaattgttctttctg 1364 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcat 398 |||||||| ||||||||||||||||| ||||| Sbjct: 1548 gagttctgagggaagaacctctcaaagatcat 1517
>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds Length = 2143 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 493 tgggcctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| ||| |||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 1557 tgggccttaagggcatcaatccaactatagccaactccatcactgaattgttctttctg 1499 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1683 gagttctgagggaagaacctctcaaagatcattctgta 1646 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggtt 284 ||||||||||||||||| || |||||||| ||||| Sbjct: 1800 actccaagtgctgctctaccagagggatcaaggtt 1766
>dbj|AB035248.1| Astragalus sinicus AsAS2 mRNA for asparagine synthetase, complete cds Length = 2133 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 497 cctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||| |||||||||||||| |||||||| ||||||||||| || |||||||| Sbjct: 1485 cctttatgccatcaatccagccatagccaactccatcactgaattgttctttctg 1431
>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase Length = 3812 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 496 gcctttaggccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||| || ||||||||||| || || ||||||||||||||||||||||| Sbjct: 3150 gccttcagcccatcaatccaactatatccaacaccatcactgaactgctc 3101 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 376 gggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgtagtcggggtgttg 435 ||||||||||| ||||| ||||| ||||| | || ||||||||||| || || |||||| Sbjct: 3365 gggaagaacctttcaaagatcattctgtagtaataagcctcttttgtggttggtgtgttg 3306 Query: 436 tgtgggtaaat 446 || |||||||| Sbjct: 3305 tgggggtaaat 3295 Score = 40.1 bits (20), Expect = 7.5 Identities = 68/84 (80%) Strand = Plus / Minus Query: 246 atggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatccca 305 |||||| || || ||||||||||| || ||||||| || |||||| ||||| ||||| Sbjct: 3689 atggacgccgagagctgctctccccgacggatccaaattgttcgaccagcgagcgtccca 3630 Query: 306 ctctactgccttcgccgtgctgca 329 || | ||||||||||||||||| Sbjct: 3629 ttcgatagccttcgccgtgctgca 3606
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 1492 aggccatcaatccaactatagccaactccatcactgaattgttctttctg 1443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 244 agatggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcc 303 ||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 1750 agatgcactcctagtgctgctctacctgaaggatcaaggttattagaccaagcagcatcc 1691 Query: 304 cactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggatt 363 ||||| |||||||| || ||||| ||||| || |||| || || || || || || | Sbjct: 1690 cactcaactgcctttgctgtgctacatgcaacagttggtcctccaggaacagttagccta 1631 Query: 364 gccgagttctgggggaagaacctctcaaatatcatcctgta 404 || |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1630 gctgagttctgtgggaagaacctttcaaagatcattctgta 1590
>emb|X82849.1|ZMASPSY Z.mays mRNA for aspargine synthetase Length = 2135 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| |||||| |||||||||| || ||||||||||| |||||||| Sbjct: 1394 aggccatcgatccagttgtagccaacgccgtcactgaactgttctttctg 1345
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 1541 aggccatcaatccaactatagccaactccatcactgaattgttctttctg 1492 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcat 398 |||||||| ||||||||||||||||| ||||| Sbjct: 1676 gagttctgagggaagaacctctcaaagatcat 1645
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| |||||| |||||||||| || ||||||||||| |||||||| Sbjct: 1488 aggccatcgatccagttgtagccaacgccgtcactgaactgttctttctg 1439
>gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds Length = 1752 Score = 58.0 bits (29), Expect = 3e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 ||||||||||||||||| || || ||||| ||||| ||||| |||||||||||| Sbjct: 1653 actccaagtgctgctctaccagatggatcaaggttgttagaccaagcagcatcccactca 1594 Query: 310 actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 369 || || || || ||||| ||||| || ||||| || || || || |||| | || ||| Sbjct: 1593 acagctttggctgtgctacatgcaacacttggtcctccaggaacactcagcctggctgag 1534 Query: 370 ttctgggggaagaacctctcaaatatcat 398 ||||| ||||||||||||||||||||||| Sbjct: 1533 ttctgagggaagaacctctcaaatatcat 1505 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| | |||||||| ||||||||||| || |||||||| Sbjct: 1401 aggccatcaatccaaccatagccaactccatcactgaattgttctttctg 1352
>gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mRNA, complete cds Length = 1850 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 298 gcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctgg 350 |||||||||||||| ||||| |||||||||||||| || ||||| || ||||| Sbjct: 1623 gcatcccactctaccgccttagccgtgctgcatgccacacttggaccccctgg 1571 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactg 542 ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1416 ccatcgatccagctgtatccaactccgtcactgaactg 1379
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 519 gtagccaacaccatcactgaactgctctttctg 551 ||||||||||||||||||||||||||| ||||| Sbjct: 114646 gtagccaacaccatcactgaactgctccttctg 114614
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 8770709 ccatcaatccaactgtacccaacaccatcactgaattgctc 8770749
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 41030 ccatcaatccaactgtacccaacaccatcactgaattgctc 41070
>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full insert sequence Length = 2265 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1513 ccatcaatccaactgtacccaacaccatcactgaattgctc 1473
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 519 gtagccaacaccatcactgaactgctctttctg 551 ||||||||||||||||||||||||||| ||||| Sbjct: 113088 gtagccaacaccatcactgaactgctccttctg 113056
>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds Length = 2172 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1524 ccatcaatccaactgtacccaacaccatcactgaattgctc 1484
>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine synthetase, complete cds Length = 2141 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctc 545 ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1524 ccatcaatccaactgtacccaacaccatcactgaattgctc 1484
>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds Length = 2108 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcat 398 |||||||| ||||||||||||||||||||||| Sbjct: 1679 gagttctgagggaagaacctctcaaatatcat 1648 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| | |||||||| ||||||||||| || |||||||| Sbjct: 1544 aggccatcaatccaaccatagccaactccatcactgaattgttctttctg 1495 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggtt 284 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1796 actccaagtgctgctctacctgatggatcaaggtt 1762
>ref|XM_747043.1| Aspergillus fumigatus Af293 asparagine synthetase glutamine-hydrolyzing 2 (Afu4g06900) partial mRNA Length = 1920 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 497 cctttaggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||| ||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 1627 ccttcaggccgtcaatccagctgtagccgacaccgtcgctgaattgctccttctg 1573
>emb|X52180.1|PSAS2 Pea AS2 root mRNA for asparagine synthase (EC 6.3.5.4) Length = 2002 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 362 ttgccgagttctgggggaagaacctctcaaatatcatcctgta 404 ||||||||||||| |||||||||| |||||| ||||| ||||| Sbjct: 1635 ttgccgagttctgagggaagaaccgctcaaagatcattctgta 1593 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 1492 ccatcaatccagctataaccaactccatcactgaattgttctttctg 1446
>gb|DQ455293.1| Medicago truncatula cDNA-AFLP fragment BT11M44_226 sequence Length = 277 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 258 ccatcaatccagccatagccaactccatcactgaactgttccttctg 212
>gb|L40327.1|ALFASPSYN Medicago sativa asparagine synthetase gene, exons 1-13 and complete cds Length = 7969 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 505 ccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| | |||||||| ||||||||||||||||| ||||| Sbjct: 6616 ccatcaatccaaccatagccaactccatcactgaactgctccttctg 6570
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaa 539 |||||||||||||| || || ||||||||||||||||| Sbjct: 6879 aggccatcaatccaactataaccaacaccatcactgaa 6842 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 ctgggggaagaacctctcaaatatcatcctgta 404 ||||||||||||||||||||| ||||| ||||| Sbjct: 7110 ctgggggaagaacctctcaaagatcattctgta 7078 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 ||||||||||||||||| || || ||||| |||||| ||||| |||||||||||| Sbjct: 7521 actccaagtgctgctctaccagaaggatcaaggttcttggaccaagaagcatcccactca 7462 Query: 310 actgccttcgccgtgctgcatgc 332 || ||||| || ||||| ||||| Sbjct: 7461 acagccttagctgtgctacatgc 7439
>gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, complete cds Length = 2211 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| | |||||||| ||||||||||| || |||||||| Sbjct: 1567 aggccatcaatccaaccatagccaactccatcactgaattgttctttctg 1518 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 370 ttctgggggaagaacctctcaaatatcat 398 ||||| ||||||||||||||||||||||| Sbjct: 1699 ttctgagggaagaacctctcaaatatcat 1671
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||| |||||| || || |||||||||||||||||||| Sbjct: 1677700 atccagccgtagcccacgccgtcactgaactgctctttctg 1677660
>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase Length = 2154 Score = 50.1 bits (25), Expect = 0.008 Identities = 118/149 (79%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 ||||||||||||||||| || || ||||| ||||| || ||||| ||||||||| || Sbjct: 1766 actccaagtgctgctctaccagatggatcaaggttgcctgaccaagaagcatcccattca 1707 Query: 310 actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 369 | || || | ||||||||||| || || || || || || |||||||| |||||||| Sbjct: 1706 atagctttttctgtgctgcatgcaacactaggtcctccaggaactgtcagccttgccgag 1647 Query: 370 ttctgggggaagaacctctcaaatatcat 398 ||||| ||||| || || ||||| ||||| Sbjct: 1646 ttctgagggaaaaatctttcaaagatcat 1618 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 504 gccatcaatccagctgtagccaacaccatcactgaa 539 |||||||||||||| || ||||| ||||||||||| Sbjct: 1512 gccatcaatccagccatatccaactccatcactgaa 1477
>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4) Length = 2200 Score = 50.1 bits (25), Expect = 0.008 Identities = 118/149 (79%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 ||||||||||||||||| || || ||||||||||| ||||| ||||||||| || Sbjct: 1742 actccaagtgctgctctaccagaaggatccaggttgtttgaccatgaagcatcccattca 1683 Query: 310 actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 369 | || ||| | ||||||||||| || || || || || || ||||| || |||||||| Sbjct: 1682 atagctttctctgtgctgcatgcaacactaggtcctccaggaactgtaagccttgccgag 1623 Query: 370 ttctgggggaagaacctctcaaatatcat 398 ||||| ||||| ||||| ||||| ||||| Sbjct: 1622 ttctgagggaaaaacctttcaaagatcat 1594
>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 3/20 Length = 240050 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 507 atcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||||||| || || ||| ||||||||||||||| Sbjct: 196195 atcaatccagctgtagcctacgccgtcagagaactgctctttctg 196239
>emb|AJ549919.1|LJA549919 Lotus japonicus mRNA for asparagine synthetase 3 (as3 gene) Length = 2401 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1517 atccagctgtagcccacgccatcgctgaactgctccttctg 1477
>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I Length = 2086 Score = 50.1 bits (25), Expect = 0.008 Identities = 118/149 (79%) Strand = Plus / Minus Query: 250 actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 309 ||||||||||||||||| ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1793 actccaagtgctgctctacctgatggatcaaggttgttagaccaggcagcatcccactca 1734 Query: 310 actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 369 || || || || ||||| ||||| || |||||||| || || || | || | || ||| Sbjct: 1733 acagcttttgctgtgctacatgcaacacttggccctccaggaacactgagtctagctgag 1674 Query: 370 ttctgggggaagaacctctcaaatatcat 398 | || ||||||||||||||||||||||| Sbjct: 1673 tcttgagggaagaacctctcaaatatcat 1645 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| | || ||||| ||||||||||| || |||||||| Sbjct: 1541 aggccatcaatccaaccataaccaactccatcactgaattgttctttctg 1492
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 507 atcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||||||| || || ||| ||||||||||||||| Sbjct: 2265876 atcaatccagctgtagcctacgccgtcagagaactgctctttctg 2265832
>gb|AF014055.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2052 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| || || ||||||||||||||||| |||||||| Sbjct: 1385 atccagctatatccgacaccatcactgaactgttctttctg 1345 Score = 40.1 bits (20), Expect = 7.5 Identities = 65/80 (81%) Strand = Plus / Minus Query: 322 gtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgagttctgggggaag 381 |||||||| || || || ||||||||||| || || || | || |||||||| ||||| Sbjct: 1574 gtgctgcaagccacactcggcccgcctggaacagtgagcttggctgagttctgtgggaaa 1515 Query: 382 aacctctcaaatatcatcct 401 |||| ||| ||||||||||| Sbjct: 1514 aaccgctcgaatatcatcct 1495
>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the complete genome Length = 291847 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 508 tcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| ||||||||||||||| ||| || |||||||| Sbjct: 10474 tcaatccagctatagccaacaccatcagagaattgttctttctg 10431
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 508 tcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| ||||||||||||||| ||| || |||||||| Sbjct: 1343515 tcaatccagctatagccaacaccatcagagaattgttctttctg 1343558
>emb|CR378666.1| Photobacterium profundum SS9; segment 4/12 Length = 348313 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 499 tttaggccatcaatccagctgtagccaacaccatca 534 ||||||| |||||||||||| ||||| ||||||||| Sbjct: 95623 tttaggctatcaatccagctatagccgacaccatca 95658
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 508 tcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| ||||||||||||||| ||| || |||||||| Sbjct: 1336316 tcaatccagctatagccaacaccatcagagaattgttctttctg 1336359
>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20 Length = 258050 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 508 tcaatccagctgtagccaacaccatcactgaactgctctttctg 551 ||||||||||| ||||||||||||||| ||| || |||||||| Sbjct: 34225 tcaatccagctatagccaacaccatcagagaattgttctttctg 34268
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 504 gccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1635 gccatcaatccaactgtatccaactccatcgctaaactgttctttctg 1588
>gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA, complete cds Length = 2184 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 504 gccatcaatccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||| | |||||||| |||||||||||||| || ||||| Sbjct: 1578 gccatcaatccaaccatagccaactccatcactgaactgttccttctg 1531 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 362 ttgccgagttctgggggaagaacctctcaaatatcat 398 |||| |||||||| ||||| ||||||||||| ||||| Sbjct: 1720 ttgctgagttctgagggaaaaacctctcaaagatcat 1684
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 526 acaccatcactgaactgctcttt 548 ||||||||||||||||||||||| Sbjct: 677276 acaccatcactgaactgctcttt 677298
>emb|BX823779.1|CNS0A6KC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 513 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 gagttctgggggaagaacctctcaaatatcatcctgta 404 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 113 gagttctgcgggaagaacctttcaaagatcattctgta 76
>gb|AY208747.1| Securigera parviflora asparagine synthetase (AS2) gene, complete cds Length = 7074 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 502 aggccatcaatccagctgtagccaacaccatcactgaa 539 |||||||||||||| | |||||| || ||||||||||| Sbjct: 5956 aggccatcaatccaaccgtagccgactccatcactgaa 5919
>ref|XM_561050.1| Anopheles gambiae str. PEST ENSANGP00000025823 (ENSANGG00000022672), partial mRNA Length = 1158 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctcttt 548 |||||||| ||||| ||||||||||| || |||||||| Sbjct: 881 atccagctatagccgacaccatcactaaattgctcttt 844
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || |||||| |||||| |||||||| Sbjct: 1497707 atccagctgtagcccacgccatcagagaactgttctttctg 1497747
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 ccaccgagcatcccactctac 311 ||||||||||||||||||||| Sbjct: 3292410 ccaccgagcatcccactctac 3292390
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || || ||| ||||||||||||||| Sbjct: 2151539 atccagctgtagcctacgccgtcagagaactgctctttctg 2151499
>gb|AF014057.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 1906 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| || || ||||||||||| ||||| |||||||| Sbjct: 1385 atccagctatatccgacaccatcactaaactgttctttctg 1345
>gb|AF014056.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2055 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||| || || ||||||||||| ||||| |||||||| Sbjct: 1385 atccagctatatccgacaccatcactaaactgttctttctg 1345
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 511 atccagctgtagccaacaccatcactgaactgctctttctg 551 |||||||||||||| || || ||| ||||||||||||||| Sbjct: 781105 atccagctgtagcctacgccgtcagagaactgctctttctg 781145
>emb|CT009733.13| Mouse DNA sequence from clone RP23-157D19 on chromosome 13, complete sequence Length = 192464 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tgtagccaacaccatcactga 538 ||||||||||||||||||||| Sbjct: 101503 tgtagccaacaccatcactga 101523
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gatgctcctgctcataggcc 240 |||||||||||||||||||| Sbjct: 2224484 gatgctcctgctcataggcc 2224503
>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3' end of the COL4A2 gene for collagen type IV alpha 2, the RAB20 gene for a RAS oncogene family member, a novel gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene (FLJ12118) and three CpG islands, complete sequence Length = 177392 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 tcttgctggttcctgccatgatgg 211 |||||||| ||||||||||||||| Sbjct: 8457 tcttgctgtttcctgccatgatgg 8480
>emb|Y10196.1|HSPEX Homo sapiens PHEX gene Length = 242825 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctatagaaacattaatgcac 44 |||||||||||||||||||| Sbjct: 22051 ctatagaaacattaatgcac 22070
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcactcaaccttaggtctg 68 |||||||||||||||||||| Sbjct: 16589 ttcactcaaccttaggtctg 16570
>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence Length = 146549 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gtgctgctctccctgagggatcca 280 |||||||||||| ||||||||||| Sbjct: 3400 gtgctgctctccatgagggatcca 3423
>gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, complete sequence Length = 170299 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gtgctgctctccctgagggatcca 280 |||||||||||| ||||||||||| Sbjct: 156531 gtgctgctctccatgagggatcca 156554
>emb|BX571800.8| Zebrafish DNA sequence from clone DKEY-29B15 in linkage group 5, complete sequence Length = 195520 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gattctgtgtgggcctttag 503 |||||||||||||||||||| Sbjct: 99965 gattctgtgtgggcctttag 99946
>gb|AC092755.4| Homo sapiens chromosome 15 clone RP11-361D15 map 15q22, complete sequence Length = 187429 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccttaggtctgcatcactct 77 |||||||||||||||||||| Sbjct: 14165 ccttaggtctgcatcactct 14184
>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete sequence Length = 173411 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccttaggtctgcatcactct 77 |||||||||||||||||||| Sbjct: 152367 ccttaggtctgcatcactct 152386
>gb|U73024.1|U73024 Homo sapiens cosmid clone U54B12 from Xp22.1-22.2, complete sequence Length = 38476 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctatagaaacattaatgcac 44 |||||||||||||||||||| Sbjct: 31688 ctatagaaacattaatgcac 31707
>gb|AC005344.1| Homo sapiens 12 PAC RPCI1-53O8 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 153836 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcactcaaccttaggtctg 68 |||||||||||||||||||| Sbjct: 21723 ttcactcaaccttaggtctg 21704
>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence Length = 248067 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gtgctgctctccctgagggatcca 280 ||||||||||||| |||||||||| Sbjct: 165502 gtgctgctctcccagagggatcca 165479 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,304,461 Number of Sequences: 3902068 Number of extensions: 4304461 Number of successful extensions: 77068 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76587 Number of HSP's gapped (non-prelim): 475 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)