ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37k17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBa0056G17.8), mRNA Length = 1748 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 1556 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 1497 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1496 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 1437 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 1436 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 1377 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 1376 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 1317 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 1316 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 1257 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 1256 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 1198 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 1714 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 1655 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 1654 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 1599
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 51694 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 51635 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 51634 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 51575 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 51574 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 51515 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 51514 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 51455 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 51454 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 51395 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 51394 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 51336 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 51852 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 51793 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 51792 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 51737 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 65032 gtagaagaactccagctgcgcgatgccgctgaacacgtc 64994 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 64866 acgcccatccgctgcagctgcgt 64844
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 22597025 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 22596966 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 22596965 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 22596906 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 22596905 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 22596846 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 22596845 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 22596786 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 22596785 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 22596726 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 22596725 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 22596667 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 22597183 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 22597124 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 22597123 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 22597068 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 22610363 gtagaagaactccagctgcgcgatgccgctgaacacgtc 22610325 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 22610197 acgcccatccgctgcagctgcgt 22610175 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 767565 ggccgacgccgatgcgctgcagctgcgtga 767594 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgtga 584 |||||||||||||||||| |||||| Sbjct: 16905155 acgcccatccgctgcagcagcgtga 16905131
>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full insert sequence Length = 1942 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 1613 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 1554 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1553 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 1494 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 1493 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 1434 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 1433 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 1374 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 1373 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 1314 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 1313 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 1255 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 1771 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 1712 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 1711 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 1656
>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full insert sequence Length = 1938 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 1603 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 1544 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1543 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 1484 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 1483 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 1424 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 1423 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 1364 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 1363 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 1304 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 1303 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 1245 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 1761 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 1702 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 1701 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 1646
>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full insert sequence Length = 1880 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 1621 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 1562 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1561 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 1502 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 1501 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 1442 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 1441 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 1382 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 1381 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 1322 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 1321 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 1263 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 1779 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 1720 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 1719 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 1664
>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full insert sequence Length = 1950 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 1621 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 1562 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1561 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 1502 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 1501 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 1442 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 1441 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 1382 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 1381 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 1322 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 1321 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 1263 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 1779 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 1720 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 1719 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 1664
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 228 bits (115), Expect = 2e-56 Identities = 298/359 (83%) Strand = Plus / Minus Query: 307 ggagttcaggtagtaaccaagcgacatcgccaggaacgagaatgccgagcataggctccg 366 |||||| | |||||| || ||||| | ||||||||| ||||| |||||||| |||||||| Sbjct: 22609493 ggagttgacgtagtagcccagcgagagcgccaggaaggagaaggccgagcagaggctccg 22609434 Query: 367 catcgacatgggggcttccgagtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||| |||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 22609433 catcgacacgggggcctccgagtagaagaattccagctgagcgatgccgcagaagacgtc 22609374 Query: 427 agagcaggcgatgagcatgaactgggggagctgccacgctatgctcaggttgtggccggc 486 |||||||| | || | |||||| || ||||||||||| |||||||||||| |||| | Sbjct: 22609373 ggagcaggccaggatgacgaactgcggcagctgccacgcgatgctcaggttgccgccgtc 22609314 Query: 487 cccgacgctgcgcagcctccacatctcaaccagtgccgccgcggccagcgccgggaccgc 546 || |||||||||||||| |||| |||| | || |||||| | ||||||||||| ||||| Sbjct: 22609313 cctgacgctgcgcagccgccacgtctccagcacggccgccaccgccagcgccggcaccgc 22609254 Query: 547 taggaaccggccgacgcccatccgctgcagctgcgtgagcccagcgacgtttccagtgta 606 || ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||||| Sbjct: 22609253 cagcaaccgccccacgcccatccgctgcagctgcgtcagccccgcggggttcccggtgta 22609194 Query: 607 tcgcctggctattgggatcacaatgctgtcctggatcacgacgaagatcatcatgaaga 665 |||||||| || |||| || | ||||||||| ||| || ||||||||||||||| Sbjct: 22609193 gcgcctggcgatcgggacgaccaccgtgtcctggaacaccacccagatcatcatgaaga 22609135 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 146 gtataattcttcgcgaaggccgtgtacacaacgaagttcaccgcgccgatcccagcccac 205 ||||||||||| || ||||| | |||||| || ||||| | |||| |||||| | ||| Sbjct: 22609651 gtataattcttggcaaaggcggcgtacaccacaaagttgatggcgctgatccccgtccag 22609592 Query: 206 agccagaagtagtagtcaagatgcccgtcgttcaagtcggcgggaagccagccctt 261 |||||||| |||||||| ||||| |||||||| | ||||||||| ||||||||||| Sbjct: 22609591 agccagaaatagtagtccagatggccgtcgttgaggtcggcggggagccagccctt 22609536 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 22622831 gtagaagaactccagctgcgcgatgccgctgaacacgtc 22622793 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 22622665 acgcccatccgctgcagctgcgt 22622643 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 767562 ggccgacgccgatgcgctgcagctgcgtga 767591 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgtga 584 |||||||||||||||||| |||||| Sbjct: 16914195 acgcccatccgctgcagcagcgtga 16914171
>gb|AY110599.1| Zea mays CL20165_1 mRNA sequence Length = 722 Score = 167 bits (84), Expect = 6e-38 Identities = 210/252 (83%) Strand = Plus / Minus Query: 326 agcgacatcgccaggaacgagaatgccgagcataggctccgcatcgacatgggggcttcc 385 |||||||| ||||| ||| ||| |||||||| ||||| ||||| ||| || || ||| Sbjct: 255 agcgacatggccagaaactggaacgccgagcacaggctgcgcatggacgcaggcgcctcc 196 Query: 386 gagtagaagaactcgagctgggctatgccgcagaacacgtcagagcaggcgatgagcatg 445 | |||||||||||| ||||| || ||||||||||||||||| |||||||| | || || | Sbjct: 195 gcgtagaagaactccagctgcgcgatgccgcagaacacgtcggagcaggccaggatcacg 136 Query: 446 aactgggggagctgccacgctatgctcaggttgtggccggccccgacgctgcgcagcctc 505 ||||| |||||||||||| | ||||||||||| || |||||| ||||||||||||||| Sbjct: 135 aactgcgggagctgccacccgatgctcaggttatgcccggccttcacgctgcgcagcctc 76 Query: 506 cacatctcaaccagtgccgccgcggccagcgccgggaccgctaggaaccggccgacgccc 565 ||| |||| |||||||| || || ||||| | |||| ||| || ||||| ||||||||| Sbjct: 75 cacgtctccaccagtgcggcggccgccagagatgggatcgccagcaaccgcccgacgccc 16 Query: 566 atccgctgcagc 577 |||||||||||| Sbjct: 15 atccgctgcagc 4 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 164 gccgtgtacacaacgaagttcaccgcgccgatcccagcccacagccagaagtagtagtca 223 ||||||||||| ||| |||||||| | | |||||| | ||||||||||||||||||||| Sbjct: 417 gccgtgtacacgacgtagttcaccacactgatccccgtccacagccagaagtagtagtcc 358 Query: 224 agatgcccgtcgttcaagtcggcgggaagccagcccttcccgcc 267 || || |||||||| | ||| ||||| ||||||||||| ||||| Sbjct: 357 aggtggccgtcgttgaggtcagcggggagccagcccttgccgcc 314
>ref|NM_197915.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBa0056G17.27), mRNA Length = 1716 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 1428 gtagaagaactccagctgcgcgatgccgctgaacacgtc 1390 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 1262 acgcccatccgctgcagctgcgt 1240
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 cagtgccgccgcggccagcgccg 539 ||||||||||||||||||||||| Sbjct: 503099 cagtgccgccgcggccagcgccg 503121
>dbj|AK121847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101J24, full insert sequence Length = 2159 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 1665 gtagaagaactccagctgcgcgatgccgctgaacacgtc 1627 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 1499 acgcccatccgctgcagctgcgt 1477
>dbj|AK066937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092G19, full insert sequence Length = 2695 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 388 gtagaagaactcgagctgggctatgccgcagaacacgtc 426 |||||||||||| ||||| || ||||||| ||||||||| Sbjct: 1500 gtagaagaactccagctgcgcgatgccgctgaacacgtc 1462 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgt 582 ||||||||||||||||||||||| Sbjct: 1334 acgcccatccgctgcagctgcgt 1312
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 553 ccggccgacgcccatccgctgca 575 ||||||||||||||||||||||| Sbjct: 3332429 ccggccgacgcccatccgctgca 3332407
>ref|NM_194571.1| Oryza sativa (japonica cultivar-group) putative LeOPT1 - oligopeptide transporter (OSJNBb0012A20.8), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 1303 ggccgacgccgatgcgctgcagctgcgtga 1274
>ref|NM_190327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 1225 ggccgacgcccatccgcgccagctgcgtga 1196
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 1210 ggccgacgcccatccgcgccagctgcgtga 1181
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 48422 ggccgacgccgatgcgctgcagctgcgtga 48451
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 767565 ggccgacgccgatgcgctgcagctgcgtga 767594
>ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1984 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 1355 ggccgatgcccatccgctgcagctgggtga 1326
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 110243 ggccgacgcccatccgcgccagctgcgtga 110214 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 104802 ggccgacgcccatccgcgccagctgcgtga 104773
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 39308537 ggccgacgcccatccgcgccagctgcgtga 39308508 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 39303096 ggccgacgcccatccgcgccagctgcgtga 39303067 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 2296479 ggccgatgcccatccgctgcagctgggtga 2296450
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 89783 ggccgacgcccatccgcgccagctgcgtga 89754 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 ||||||||||||||||| ||||||||||| Sbjct: 84342 ggccgacgcccatccgcgccagctgcgtga 84313
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 25529 ggccgatgcccatccgctgcagctgggtga 25500
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 80063 ggccgatgcccatccgctgcagctgggtga 80034
>dbj|AK105664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H07, full insert sequence Length = 2189 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 1456 ggccgatgcccatccgctgcagctgggtga 1427
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full insert sequence Length = 3090 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 2474 ggccgatgcccatccgctgcagctgggtga 2445
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full insert sequence Length = 2307 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 1457 ggccgatgcccatccgctgcagctgggtga 1428
>dbj|AK068679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C22, full insert sequence Length = 1879 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||||||| || |||||||||||||||| Sbjct: 1231 ggccgacgccgatgcgctgcagctgcgtga 1202
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full insert sequence Length = 1984 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||||||||||||||| |||| Sbjct: 1355 ggccgatgcccatccgctgcagctgggtga 1326
>gb|AY106418.1| Zea mays PCO154787 mRNA sequence Length = 2101 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 555 ggccgacgcccatccgctgcagctgcgtga 584 |||||| |||||| |||||||||||||||| Sbjct: 1465 ggccgatgcccatgcgctgcagctgcgtga 1436
>ref|XM_462682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 1345 cgcccatccgctgcagctgcg 1325
>ref|NM_196955.1| Oryza sativa (japonica cultivar-group) putative peptide transport protein (OSJNBa0079L16.13), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgtga 584 |||||||||||||||||| |||||| Sbjct: 1274 acgcccatccgctgcagcagcgtga 1250
>ref|XM_479079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2300 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 1740 actgcgggagctgccacgcgatgctcagg 1712
>ref|XM_476961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1857 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 556 gccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||||| ||| |||||| Sbjct: 1329 gccgacgcccatccgctggagcggcgtga 1301
>ref|XM_473737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 1345 cgcccatccgctgcagctgcg 1325
>gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, complete sequence Length = 208311 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tcccagcccacagccagaagt 215 ||||||||||||||||||||| Sbjct: 141976 tcccagcccacagccagaagt 141956
>gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, complete sequence Length = 211603 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tcccagcccacagccagaagt 215 ||||||||||||||||||||| Sbjct: 166885 tcccagcccacagccagaagt 166865
>gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, complete sequence Length = 204127 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aaagctgtattgtagacagta 65 ||||||||||||||||||||| Sbjct: 137226 aaagctgtattgtagacagta 137246
>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence Length = 203403 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aaagctgtattgtagacagta 65 ||||||||||||||||||||| Sbjct: 66300 aaagctgtattgtagacagta 66280
>gb|AY305030.1| Oryza sativa (japonica cultivar-group) nitrate transporter NRT1;2 mRNA, complete cds Length = 1784 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 1347 cgcccatccgctgcagctgcg 1327
>gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, complete sequence Length = 147330 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 atcccagcccacagccagaagtagt 218 ||||||||| ||||||||||||||| Sbjct: 91280 atcccagccaacagccagaagtagt 91256
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 30198855 cgcccatccgctgcagctgcg 30198835
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 24669612 actgcgggagctgccacgcgatgctcagg 24669584 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 556 gccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||||| ||| |||||| Sbjct: 4911025 gccgacgcccatccgctggagcggcgtga 4911053 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 atatttaattacatcaaagct 50 ||||||||||||||||||||| Sbjct: 3387916 atatttaattacatcaaagct 3387896
>gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, complete sequence Length = 179640 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 194 atcccagcccacagccagaagtagt 218 ||||||||| ||||||||||||||| Sbjct: 34929 atcccagccaacagccagaagtagt 34953
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgtga 584 |||||||||||||||||| |||||| Sbjct: 89607 acgcccatccgctgcagcagcgtga 89583
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 669 ccgaggccgagttcatggaag 689 ||||||||||||||||||||| Sbjct: 497332 ccgaggccgagttcatggaag 497312
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 atatttaattacatcaaagct 50 ||||||||||||||||||||| Sbjct: 27736 atatttaattacatcaaagct 27716
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 125679 actgcgggagctgccacgcgatgctcagg 125651
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 25549 actgcgggagctgccacgcgatgctcagg 25521
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 556 gccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||||| ||| |||||| Sbjct: 96509 gccgacgcccatccgctggagcggcgtga 96537
>dbj|AK111434.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-H11, full insert sequence Length = 1974 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 556 gccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||||| ||| |||||| Sbjct: 378 gccgacgcccatccgctggagcggcgtga 406
>gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete sequence Length = 158347 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gtattgtagacagtacataca 71 ||||||||||||||||||||| Sbjct: 50496 gtattgtagacagtacataca 50516
>dbj|AK101480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041C01, full insert sequence Length = 2178 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 1575 cgcccatccgctgcagctgcg 1555
>dbj|AK101099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025A03, full insert sequence Length = 2306 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 1746 actgcgggagctgccacgcgatgctcagg 1718
>dbj|AK101055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020K03, full insert sequence Length = 2106 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 acgcccatccgctgcagctgcgtga 584 |||||||||||||||||| |||||| Sbjct: 1412 acgcccatccgctgcagcagcgtga 1388
>dbj|AK061822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B12, full insert sequence Length = 1233 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 447 actgggggagctgccacgctatgctcagg 475 |||| |||||||||||||| ||||||||| Sbjct: 539 actgcgggagctgccacgcgatgctcagg 511
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 cgcccatccgctgcagctgcg 581 ||||||||||||||||||||| Sbjct: 95146 cgcccatccgctgcagctgcg 95126
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gtattgtagacagtacataca 71 ||||||||||||||||||||| Sbjct: 1274640 gtattgtagacagtacataca 1274660
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 557 ccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||| |||| |||||| Sbjct: 152004 ccgacgcccatccgcttcagcagcgtga 152031
>ref|NM_125668.1| Arabidopsis thaliana transporter AT5G62730 mRNA, complete cds Length = 1770 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 aagatcatcatgaagaccac 669 |||||||||||||||||||| Sbjct: 1202 aagatcatcatgaagaccac 1183
>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete sequence Length = 196777 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 acaatgctgtcctggatcac 645 |||||||||||||||||||| Sbjct: 122981 acaatgctgtcctggatcac 123000
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 aagccagcccttcccgccgc 269 |||||||||||||||||||| Sbjct: 290156 aagccagcccttcccgccgc 290137
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gacagtacatacacaacaaa 78 |||||||||||||||||||| Sbjct: 1031249 gacagtacatacacaacaaa 1031268
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gacagtacatacacaacaaa 78 |||||||||||||||||||| Sbjct: 73250 gacagtacatacacaacaaa 73269
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ccgctgcagctgcgtgagcc 587 |||||||||||||||||||| Sbjct: 2092453 ccgctgcagctgcgtgagcc 2092472
>gb|AY658870.1| Synthetic construct Peudomonas aeruginosa clone FLH042174.01F PA0863 gene, partial cds Length = 960 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 gcggccagcgccgggaccgc 546 |||||||||||||||||||| Sbjct: 683 gcggccagcgccgggaccgc 664
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 aggcgatgagcatgaactgg 451 |||||||||||||||||||| Sbjct: 1779621 aggcgatgagcatgaactgg 1779602
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 557 ccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||| |||| |||||| Sbjct: 2114581 ccgacgcccatccgcttcagcagcgtga 2114608
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 557 ccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||| |||| |||||| Sbjct: 4875 ccgacgcccatccgcttcagcagcgtga 4902
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cacaacaaagaggataagaa 89 |||||||||||||||||||| Sbjct: 548910 cacaacaaagaggataagaa 548929
>emb|Y07533.1|PDCYCA P.denitrificans cyc A and cta DII genes for cytochrome c 550 and cytochrome c oxidase beta subunit I Length = 2629 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 639 ggatcacgacgaagatcatcatga 662 ||||||||||||||| |||||||| Sbjct: 1183 ggatcacgacgaagaacatcatga 1160
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ccgctgcagctgcgtgagcc 587 |||||||||||||||||||| Sbjct: 16530 ccgctgcagctgcgtgagcc 16549
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ccgctgcagctgcgtgagcc 587 |||||||||||||||||||| Sbjct: 171443 ccgctgcagctgcgtgagcc 171462
>emb|AL513444.1|NCB11N2 Neurospora crassa DNA linkage group V BAC contig B11N2 Length = 99360 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 tgggggcttccgagtagaagaact 398 |||||||||||| ||||||||||| Sbjct: 27420 tgggggcttccgggtagaagaact 27397
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ccgacgctgcgcagcctcca 507 |||||||||||||||||||| Sbjct: 58640 ccgacgctgcgcagcctcca 58621
>gb|AF421185.1|AF421185 Bos taurus lysyl oxidase-like 1 (Loxl1) mRNA, complete cds Length = 1917 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggccccgacgctgcgcagcc 503 |||||||||||||||||||| Sbjct: 1004 ggccccgacgctgcgcagcc 1023
>ref|XM_627449.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_730), partial mRNA Length = 5814 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 646 gacgaagatcatcatgaaga 665 |||||||||||||||||||| Sbjct: 1693 gacgaagatcatcatgaaga 1712
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 gccgacgcccatccgctgcagctg 579 ||||||||||||||||||| |||| Sbjct: 163025 gccgacgcccatccgctgctgctg 163048
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 557 ccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||| |||| |||||| Sbjct: 2114593 ccgacgcccatccgcttcagcagcgtga 2114620
>gb|AE004521.1| Pseudomonas aeruginosa PAO1, section 82 of 529 of the complete genome Length = 10895 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gcggccagcgccgggaccgc 546 |||||||||||||||||||| Sbjct: 3820 gcggccagcgccgggaccgc 3839
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 gccgccgcggccagcgccgg 540 |||||||||||||||||||| Sbjct: 2650720 gccgccgcggccagcgccgg 2650739
>emb|BX294379.5| Zebrafish DNA sequence from clone DKEY-7A20 in linkage group 1, complete sequence Length = 214290 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acacaacaaagaggataaga 88 |||||||||||||||||||| Sbjct: 200430 acacaacaaagaggataaga 200449
>ref|NM_174383.2| Bos taurus lysyl oxidase-like 1 (LOXL1), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggccccgacgctgcgcagcc 503 |||||||||||||||||||| Sbjct: 1004 ggccccgacgctgcgcagcc 1023
>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 Length = 78145 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 aagatcatcatgaagaccac 669 |||||||||||||||||||| Sbjct: 14101 aagatcatcatgaagaccac 14082
>dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D02, full insert sequence Length = 2221 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 557 ccgacgcccatccgctgcagctgcgtga 584 |||||||||||||||| |||| |||||| Sbjct: 1396 ccgacgcccatccgcttcagcagcgtga 1369
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgccaggaacgagaatgccg 353 |||||||||||||||||||| Sbjct: 2668419 cgccaggaacgagaatgccg 2668400
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gcggccagcgccgggaccgc 546 |||||||||||||||||||| Sbjct: 4097385 gcggccagcgccgggaccgc 4097404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,859,930 Number of Sequences: 3902068 Number of extensions: 4859930 Number of successful extensions: 86921 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85168 Number of HSP's gapped (non-prelim): 1745 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
