ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags37k12 |
|---|---|
| Clone Library Name | barley_pub |
>VFUS_VACC6 (P26312) 14 kDa fusion protein| Length = 136 Score = 36.6 bits (83), Expect = 0.073 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +3 Query: 129 PKHKSPLRLQKREPLTGSCGRWSF-SVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWS 305 P+ +SP L + P + R S S P R P R P +H P + G RWP WS Sbjct: 8 PRARSPRELVQLLPEAWTTSRSSTGSANPSASRKPARY---PRIHAPELQSGEARWPLWS 64 Query: 306 R 308 R Sbjct: 65 R 65
>PTC2_HUMAN (Q9Y6C5) Protein patched homolog 2 (PTC2)| Length = 1203 Score = 33.9 bits (76), Expect = 0.47 Identities = 25/84 (29%), Positives = 33/84 (39%) Frame = +3 Query: 93 PPPNTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSM 272 PPP + P+ SP Q G RW S P A V + A+HPP + Sbjct: 1116 PPPEVIQMYKESPEILSPPAPQ------GGGLRWGASSSLPQSFARVTTSMTVAIHPPPL 1169 Query: 273 PVGHHRWPPWSRRPWSLRCQAQGS 344 P G + P PWS + G+ Sbjct: 1170 P-GAYIHPAPDEPPWSPAATSSGN 1192
>AP2A_RAT (P58197) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 437 Score = 33.5 bits (75), Expect = 0.61 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = +3 Query: 126 EPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWS 305 E +H R P G+ G+ ++ PP+ P P PP P+ P+S Sbjct: 15 EDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYS 74 Query: 306 --RRPWSLR-CQAQGSPEWQAW 362 P+SL AQ P+ W Sbjct: 75 HVNDPYSLNPLHAQPQPQHPGW 96
>AP2A_MOUSE (P34056) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 437 Score = 33.5 bits (75), Expect = 0.61 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = +3 Query: 126 EPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWS 305 E +H R P G+ G+ ++ PP+ P P PP P+ P+S Sbjct: 15 EDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYS 74 Query: 306 --RRPWSLR-CQAQGSPEWQAW 362 P+SL AQ P+ W Sbjct: 75 HVNDPYSLNPLHAQPQPQHPGW 96
>AP2A_HUMAN (P05549) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (AP-2 transcription factor) (Activator protein 2) (AP-2) Length = 437 Score = 33.5 bits (75), Expect = 0.61 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = +3 Query: 126 EPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWS 305 E +H R P G+ G+ ++ PP+ P P PP P+ P+S Sbjct: 15 EDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYS 74 Query: 306 --RRPWSLR-CQAQGSPEWQAW 362 P+SL AQ P+ W Sbjct: 75 HVNDPYSLNPLHAQPQPQHPGW 96
>ANTP_DROME (P02833) Homeotic protein antennapedia| Length = 378 Score = 33.5 bits (75), Expect = 0.61 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 17/103 (16%) Frame = -1 Query: 639 PRLPQGRYIDSLPQSR------LPQGRYMDNSPPAQLPQRRLADNNPEQWHQ------RS 496 P P + +PQ++ +PQ + P+Q Q++ A P+Q Q + Sbjct: 86 PDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQ 145 Query: 495 NNHNQLMDMEPGPMVSGSL-----GLGLAYEGSNPRLPDLMMG 382 H Q +P S L GLG+ EG +P L D M G Sbjct: 146 VTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSG 188
>SOS2_MOUSE (Q02384) Son of sevenless homolog 2 (SOS-2) (mSOS-2) (Fragment)| Length = 1297 Score = 32.7 bits (73), Expect = 1.0 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 14/74 (18%) Frame = +3 Query: 129 PKHKSPLRLQKREP-LTGSCGRWSFSVPPPMERAPVRQTPCPA-LHPPS----------- 269 P+ P +++ R P L G+ S PPP R P+ TP P L PP Sbjct: 1142 PRQPPPPKVKPRVPVLMGTFDGPVPSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQP 1201 Query: 270 MPVGH-HRWPPWSR 308 P+GH HR P W R Sbjct: 1202 PPLGHPHRDPDWLR 1215
>NCOA1_MOUSE (P70365) Nuclear receptor coactivator 1 (EC 2.3.1.48) (NCoA-1)| (Steroid receptor coactivator 1) (SRC-1) (Nuclear receptor coactivator protein 1) (mNRC-1) Length = 1447 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/77 (24%), Positives = 33/77 (42%) Frame = -1 Query: 570 DNSPPAQLPQRRLADNNPEQWHQRSNNHNQLMDMEPGPMVSGSLGLGLAYEGSNPRLPDL 391 +N A++ +++ +D N H S+N+ PG + ++ L GS P L Sbjct: 411 NNMVSARVNRQQSSDLNSSSSHTNSSNNQGNFGCSPGNQIVANVALNQGQAGSQSSNPSL 470 Query: 390 MMGQSPLFGPKPATLDF 340 + SP+ G A F Sbjct: 471 NLNNSPMEGTGIALSQF 487
>IL2RA_CANFA (O62802) Interleukin-2 receptor alpha chain precursor (IL-2| receptor alpha subunit) (IL-2-RA) (IL2-RA) (p55) (TAC antigen) (CD25 antigen) Length = 268 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -1 Query: 255 ELDMGSAAQAPSPWEEAQRKTNGRTIL*EVLFFVTLAGFCALAHPFFQLLCWVVVGKAR 79 E+D+ + P PWE K ++ + L + + GF AL + +C + GK R Sbjct: 115 EVDLVGHCREPPPWEHENSKRIYHFVVGQTLHYQCMQGFTALHRGPAKSICKTIFGKTR 173
>PTBP2_ARATH (Q9FGL9) Polypyrimidine tract-binding protein homolog 2| Length = 429 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = -1 Query: 576 YMDNSPPAQLPQRRLAD---NNPEQWHQRSNNHNQLMDMEPG----PMVSGSLGLG 430 Y +PP +PQ+ + + NP+Q+H +H+Q G P GS+G+G Sbjct: 338 YTMPNPPVPMPQQPVQNPYAGNPQQYHAAGGSHHQQQQQPQGGWVQPGGQGSMGMG 393
>AP2A_SHEEP (Q9N0N3) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 491 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = +3 Query: 126 EPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWS 305 + +H R P G+ G+ ++ PP+ P P PP P+ P+S Sbjct: 69 QDRHDGASNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYS 128 Query: 306 --RRPWSLR-CQAQGSPEWQAW 362 P+SL AQ P+ W Sbjct: 129 HVNDPYSLNPLHAQPQPQHPGW 150
>MTMR3_HUMAN (Q13615) Myotubularin-related protein 3 (EC 3.1.3.48) (FYVE| domain-containing dual specificity protein phosphatase 1) (FYVE-DSP1) (Zinc finger FYVE domain containing protein 10) Length = 1198 Score = 32.3 bits (72), Expect = 1.4 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Frame = -1 Query: 678 YSTPGMFIDSSTLPRLPQGRYIDSLPQSRLPQGRYMDNSPPAQLPQRRLAD---NNPEQW 508 Y PG D L RLP+ R D+L + DN+ P L RR +D N Q Sbjct: 593 YPAPGTSPDDPPLSRLPKTRSYDNLTTA-------CDNTVP--LASRRCSDPSLNEKWQE 643 Query: 507 HQRSNNHNQLMDMEPGPMVSGSLG 436 H+RS + L P+ + SLG Sbjct: 644 HRRSLELSSLAGPGEDPLSADSLG 667
>NETR_MOUSE (O08762) Neurotrypsin precursor (EC 3.4.21.-) (Motopsin)| (Brain-specific serine protease 3) (BSSP-3) Length = 761 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/57 (35%), Positives = 23/57 (40%) Frame = +3 Query: 183 CGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWSRRPWSLRCQAQGSPEW 353 C W VPP +ER+P P P R P S RPW AQG +W Sbjct: 101 CLHWD-EVPPFLERSP----PASWAELRGQPHNFCRSPDGSGRPWCFYRNAQGKVDW 152
>SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)| Length = 1332 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 14/74 (18%) Frame = +3 Query: 129 PKHKSPLRLQKREPL-TGSCGRWSFSVPPPMERAPVRQTPCPA-LHPPS----------- 269 P+ P +++ R P+ TG+ S PPP R P+ TP P L PP Sbjct: 1177 PRQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQP 1236 Query: 270 MPVGH-HRWPPWSR 308 P+GH HR W R Sbjct: 1237 PPLGHLHRDSDWLR 1250
>FYB_HUMAN (O15117) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)| (p120/p130) (SLP-76-associated phosphoprotein) (SLAP-130) Length = 783 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Frame = +3 Query: 90 LPPPNTAAERMDEPKHKSPLRLQKREPLTG----SCGRWSFS---VPPPMERAPVRQTPC 248 LPP T +P + L K + S G+ S+S +PPP P Q P Sbjct: 347 LPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406 Query: 249 PALHPPSMPV 278 PA HP PV Sbjct: 407 PASHPSQPPV 416
>CNTN5_RAT (P97527) Contactin-5 precursor (Neural recognition molecule NB-2)| Length = 1099 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +3 Query: 258 HPPSMPVGHHRWPPWSRRPWSLRCQAQGSPEWQAWDRTVVIAPSSNLATLDLNLHRPGQG 437 HPPS P G+ RW + QGS W+ +A S + + + G Sbjct: 972 HPPSEPPGNLRW------------EQQGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHS 1019 Query: 438 QGY----QIPSAQAPYPLAG 485 +G Q P A P P AG Sbjct: 1020 KGQVIETQKPQAVVPLPEAG 1039
>EPL1_NEUCR (Q7S747) Enhancer of polycomb-like protein 1| Length = 589 Score = 31.2 bits (69), Expect = 3.1 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +3 Query: 84 LFLPPPNTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHP 263 L PP + ++ MDEP +P+ L K +P + PPP++ V Q HP Sbjct: 402 LMTPPASASSGSMDEP---TPMDLDKPKP----------NPPPPVKFRGVAQDEQSLAHP 448 Query: 264 PS 269 PS Sbjct: 449 PS 450
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 31.2 bits (69), Expect = 3.1 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +3 Query: 198 FSVPPPMERAPVRQTPCPALHPPSMPVGHHRW 293 F VPPP+ P PAL PP+ P W Sbjct: 553 FRVPPPLPAQETPSPPAPALVPPTQPPQPQPW 584
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 31.2 bits (69), Expect = 3.1 Identities = 25/73 (34%), Positives = 29/73 (39%) Frame = +3 Query: 90 LPPPNTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPS 269 +PPP + M P +P + R P S G W PPP R P PP Sbjct: 263 VPPPPPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTP---------GPPG 312 Query: 270 MPVGHHRWPPWSR 308 MP G PP SR Sbjct: 313 MP-GMPPPPPPSR 324
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 30.8 bits (68), Expect = 4.0 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = +3 Query: 69 LTRF*LFLPPPNTA-AERMDEP----KHKSPLRLQKREPLTGSCGR-WSFSVPPPMERAP 230 +TR +PPP+ + R+ +P +H P R +R P TG+ G+ S ++P +E Sbjct: 251 VTRIQPLVPPPSPPPSRRLSQPWPLQQHSGPSRTVRRYPATGANGQLMSNALPSGLE--- 307 Query: 231 VRQTPCPALHPPSMPVGHHRWPPW 302 +R + A H +H PPW Sbjct: 308 LRDSSPQAAHV------NHLSPPW 325
>GAK3_HUMAN (Q9YNA8) HERV-K_19q12 provirus ancestral Gag polyprotein (Gag| polyprotein) (HERV-K(C19) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein] Length = 665 Score = 30.8 bits (68), Expect = 4.0 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Frame = +3 Query: 90 LPPPNTAAERMDEP----KHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPAL 257 L P E +P ++ P LQ R PL G + P P RAP Q P L Sbjct: 192 LQPQTQVKENKTQPPVAYQYWPPAELQYRPPLESQYG-YPGMPPAPQGRAPYPQPPTRRL 250 Query: 258 HPPSMPVGHHRWPPWSRRPWSLR---CQAQGSPEWQAWDRTVVIAPSSNLATLDLNLHRP 428 +P + P SRR L +++ + +AW V + P P Sbjct: 251 NPTAPP---------SRRGSELHEIIDKSRKEGDTEAWQFPVTLEPMP-----------P 290 Query: 429 GQG-QGYQIPSAQAPY 473 G+G Q + P+ +A Y Sbjct: 291 GEGAQEGEPPTVEARY 306
>LRFN3_HUMAN (Q9BTN0) Leucine-rich repeat and fibronectin type-III| domain-containing protein 3 precursor Length = 628 Score = 30.8 bits (68), Expect = 4.0 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 15/80 (18%) Frame = +3 Query: 273 PVGHHRWPPWS---RRPWSLRCQAQGSPEWQAWDRTVVIAPSSNL------------ATL 407 PV HR PP + RP +LRC+A G PE R ++P L TL Sbjct: 296 PVVTHRSPPLAVPAGRPAALRCRAVGDPE----PRVRWVSPQGRLLGNSSRARAFPNGTL 351 Query: 408 DLNLHRPGQGQGYQIPSAQA 467 +L + PG G + +A A Sbjct: 352 ELLVTEPGDGGIFTCIAANA 371
>FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)| (p120/p130) (SLP-76-associated phosphoprotein) (SLAP-130) Length = 819 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 Query: 201 SVPPPMERAPVRQTPCPALHPPSMPV 278 S+PPP P Q P PA HP PV Sbjct: 379 SLPPPPPTHPASQPPLPASHPAHPPV 404
>NCB5R_HUMAN (P00387) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 102 NTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVG 281 +T A ++ P K PLRL RE ++ R+ F++P P H +PVG Sbjct: 29 STPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQ-------------HILGLPVG 75 Query: 282 HH 287 H Sbjct: 76 QH 77
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 204 VPPPMERAPVRQTPCPALHPPSMPVGHHR 290 +PPP R R P P+ PP+ P HR Sbjct: 312 LPPPSPRVGKRALPGPSTQPPATPTSPHR 340
>YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III| Length = 724 Score = 30.4 bits (67), Expect = 5.2 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Frame = +3 Query: 201 SVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWSRRPWSLRCQAQGSPEW--QAWDRTV 374 SV P AP R P P L PP M + P WS+ +G+P + + +T Sbjct: 48 SVVAPHVAAPTR--PSPMLVPPGMGIDESHSSPSVESDWSVHTNEKGTPYYHNRVTKQTS 105 Query: 375 VIAPSSNLATLDLNLH-RPGQGQ 440 I P L+ + +P QGQ Sbjct: 106 WIKPDVLKTPLERSTSGQPQQGQ 128
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat| protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 669 PGMFIDSSTLPRLPQGRYIDSLPQSRLPQGRYMDNSPPAQLP 544 P F++SST P P G D P+++ P G N PP P Sbjct: 1573 PYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRP 1614
>UL56_HHV1E (P36297) Protein UL56| Length = 233 Score = 30.4 bits (67), Expect = 5.2 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Frame = +3 Query: 93 PPPNTAAERMDEPKHK----SPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALH 260 PPP + +E + +P R L G C F PPP ERA R AL Sbjct: 23 PPPYDSLSGRNEGRLSLLIWTPPRTHLHRTLLGPCRPCQFRQPPP-ERARRRSGAAHAL- 80 Query: 261 PPSMPVG 281 PPS P+G Sbjct: 81 PPSEPLG 87
>NETR_PANTR (Q5G271) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 30.0 bits (66), Expect = 6.8 Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Frame = +3 Query: 93 PPPNTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSM 272 PPP P + L Q+R P T PPP+ R P PA P ++ Sbjct: 37 PPPG--------PHYPYYLPTQQRPPRTRP--------PPPLPRFPRPPRALPAQRPHAL 80 Query: 273 PVGH----HRWPPWSRRPW 317 GH H W + PW Sbjct: 81 QAGHTPRPHPWGCPAGEPW 99
>NETR_HYLLE (Q5G268) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 30.0 bits (66), Expect = 6.8 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 12/75 (16%) Frame = +3 Query: 129 PKHKSP--------LRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGH 284 P+H P L Q+R P T PPP+ R P PA P ++ GH Sbjct: 33 PRHSPPTGPHYPYYLPTQQRPPRTRP--------PPPLPRFPRPPRALPAQRPHALQAGH 84 Query: 285 ----HRWPPWSRRPW 317 H W + PW Sbjct: 85 TPRPHPWGCPAGEPW 99
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3| Length = 802 Score = 30.0 bits (66), Expect = 6.8 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Frame = +3 Query: 90 LPPPNTAAER------MDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPV-----R 236 +PPP ++ M P H Q P+ S GR+ S+PPP + + R Sbjct: 599 MPPPQQQQQQPYGNYGMPPPSHDQGYGSQPPIPMNQSYGRYQTSIPPPPPQQQIPQGYGR 658 Query: 237 QTPCPALHPPS 269 P PPS Sbjct: 659 YQAGPPPQPPS 669
>DLG3_HUMAN (Q92796) Discs large homolog 3 (Synapse-associated protein 102)| (SAP102) (Neuroendocrine-DLG) (XLMR) Length = 817 Score = 30.0 bits (66), Expect = 6.8 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -1 Query: 633 LPQGRYIDSLPQSRLP--QGRYMDNSPPAQLPQRRLADNNPEQWHQRSNNHNQLMDMEPG 460 +P GR + +P +P ++ S P+ P+ + + W+++ N + + E Sbjct: 76 IPTGRDVGPVPLKPVPGKSTPKLNGSGPSWWPECTCTNRD---WYEQVNGSDGMFKYEEI 132 Query: 459 PMVSGSLGLGLAYEG--SNPRLPD 394 + G+ GLG + G NP +PD Sbjct: 133 VLERGNSGLGFSIAGGIDNPHVPD 156
>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 937 Score = 30.0 bits (66), Expect = 6.8 Identities = 12/30 (40%), Positives = 13/30 (43%) Frame = +3 Query: 228 PVRQTPCPALHPPSMPVGHHRWPPWSRRPW 317 P R P P PP G H P + RPW Sbjct: 2 PPRAPPAPGPRPPPRAAGRHGLSPLAPRPW 31
>CNTN5_MOUSE (P68500) Contactin-5 precursor (Neural recognition molecule NB-2)| Length = 1098 Score = 29.6 bits (65), Expect = 8.9 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Frame = +3 Query: 258 HPPSMPVGHHRWPPWSRRPWSLRCQAQGSPEWQAWDRTVVIAPSSNLATLDLNLHRPGQG 437 HPP P G+ RW + QGS W+ +A S + + + G Sbjct: 971 HPPREPPGNLRW------------EQQGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHS 1018 Query: 438 QGY----QIPSAQAPYPLAG 485 +G Q P A P P AG Sbjct: 1019 EGQVIETQKPQAVVPLPEAG 1038
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 29.6 bits (65), Expect = 8.9 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 11/137 (8%) Frame = +3 Query: 99 PNTAAERMDEPKHKSPLRL----QKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPP 266 P A+ P SP + + P T S G+ + VP P P PA PP Sbjct: 1903 PQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAP---------PPPAQPPP 1953 Query: 267 SMPVGHHRWPPWSRRPWSL-RCQAQGSPEWQAWDRTVVIAPSSNLATLDLNLHRPGQGQG 443 + + +++ L R S RT + P S +A + LN+ RP Q G Sbjct: 1954 AAVEAARQIEREAQQQQHLYRVNINNS---MPPGRTGMGTPGSQMAPVSLNVPRPNQVSG 2010 Query: 444 YQIPS------AQAPYP 476 +PS QAP P Sbjct: 2011 PVMPSMPPGQWQQAPLP 2027
>AP2B_MOUSE (Q61313) Transcription factor AP-2 beta (AP2-beta) (Activating| enhancer-binding protein 2 beta) Length = 448 Score = 29.6 bits (65), Expect = 8.9 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Frame = +3 Query: 102 NTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVG 281 N E + E +H R GS + +S PP+ P P PP P+ Sbjct: 8 NVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP 67 Query: 282 HHR-WPPWS--RRPWSLRCQAQGSPEWQAW 362 +H+ P+S P+SL Q P+ W Sbjct: 68 YHQSQDPYSHVNDPYSLNPLHQ--PQQHPW 95
>NETR_HUMAN (P56730) Neurotrypsin precursor (EC 3.4.21.-) (Motopsin) (Leydin)| Length = 875 Score = 29.6 bits (65), Expect = 8.9 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Frame = +3 Query: 129 PKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGH----HRWP 296 P + L Q+R P T PPP+ R P PA P ++ GH H W Sbjct: 41 PHYPYYLPTQQRPPTTRP--------PPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWG 92 Query: 297 PWSRRPW 317 + PW Sbjct: 93 CPAGEPW 99
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 29.6 bits (65), Expect = 8.9 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 9/78 (11%) Frame = +3 Query: 93 PPPNTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPC-------P 251 PPP + + K+KSP P T + PPP E +P TP P Sbjct: 209 PPPKHSPAPVHHYKYKSP------PPPTPV-----YKSPPPPEHSPPPPTPVYKYKSPPP 257 Query: 252 ALH--PPSMPVGHHRWPP 299 +H PP PV ++ PP Sbjct: 258 PMHSPPPPTPVYKYKSPP 275
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 29.6 bits (65), Expect = 8.9 Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 4/115 (3%) Frame = -1 Query: 678 YSTPGMFIDSSTLPRLPQGRYIDSLPQSRLPQGRYMDNSPPAQLPQRRLADNNPE----Q 511 Y P M + P P+ I + P + PQ R + P +P + A +P Q Sbjct: 409 YVAPAMVEEERESPP-PKPAAIAAPPAQQQPQQRQRQHPP---VPSHQAAQQSPAAAPVQ 464 Query: 510 WHQRSNNHNQLMDMEPGPMVSGSLGLGLAYEGSNPRLPDLMMGQSPLFGPKPATL 346 Q+ Q + P + G G P P + Q P P PA L Sbjct: 465 QQQQQQQQQQQQQQQQQPQYQQAYGQG-------PPQPQALFQQQPNSSPAPAPL 512
>BUR1_KLULA (Q6CRA9) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 645 Score = 29.6 bits (65), Expect = 8.9 Identities = 16/70 (22%), Positives = 31/70 (44%) Frame = +3 Query: 129 PKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPPWSR 308 PK P ++ P S R++ + + + P+ P P S+P G ++ PP R Sbjct: 445 PKAPRPEHIKSTIPAQPSASRYNGAATQNIPKEPIPTAPLPKGPKNSIPTGPNKLPPNPR 504 Query: 309 RPWSLRCQAQ 338 ++ + A+ Sbjct: 505 DSYASKYPAE 514
>AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (Activating| enhancer-binding protein 2 beta) Length = 449 Score = 29.6 bits (65), Expect = 8.9 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Frame = +3 Query: 102 NTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVG 281 N E + E +H R GS + +S PP+ P P PP P+ Sbjct: 8 NVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP 67 Query: 282 HHR-WPPWS--RRPWSLRCQAQGSPEWQAW 362 +H+ P+S P+SL Q P+ W Sbjct: 68 YHQSQDPYSHVNDPYSLNPLHQ--PQQHPW 95
>AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (Activating| enhancer-binding protein 2 beta) Length = 449 Score = 29.6 bits (65), Expect = 8.9 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Frame = +3 Query: 102 NTAAERMDEPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVG 281 N E + E +H R GS + +S PP+ P P PP P+ Sbjct: 8 NVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP 67 Query: 282 HHR-WPPWS--RRPWSLRCQAQGSPEWQAW 362 +H+ P+S P+SL Q P+ W Sbjct: 68 YHQSQDPYSHVNDPYSLNPLHQ--PQQHPW 95
>SPIB_PALPA (Q9I8M6) Transcription factor Spi-B-like| Length = 265 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/58 (31%), Positives = 23/58 (39%) Frame = +3 Query: 126 EPKHKSPLRLQKREPLTGSCGRWSFSVPPPMERAPVRQTPCPALHPPSMPVGHHRWPP 299 +P P L + EP T C W P E P LH ++P GH +PP Sbjct: 30 KPLPTFPHCLMEAEPPTDPCAGWLELAEPGYE--PFDSGQLAPLHTVTVPYGHGPYPP 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,788,159 Number of Sequences: 219361 Number of extensions: 2502994 Number of successful extensions: 8183 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 7230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8085 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
