ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2e24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde ... 220 7e-55
2dbj|AB084896.1| Secale cereale ALDH2b mRNA for mitochondrial ald... 204 4e-50
3dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial al... 133 1e-28
4gb|AF162665.1|AF162665 Oryza sativa aldehyde dehydrogenase (Aldh... 117 7e-24
5dbj|AK120296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 7e-24
6dbj|AK100358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 7e-24
7dbj|AK099248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 7e-24
8dbj|AK073079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 7e-24
9dbj|AK061794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 7e-24
10dbj|AB044537.1| Oryza sativa (japonica cultivar-group) mRNA for ... 117 7e-24
11gb|AF269064.1|AF269064 Zea mays T-cytoplasm male sterility resto... 109 2e-21
12gb|AY109113.1| Zea mays PCO108969 mRNA sequence 109 2e-21
13gb|U43082.1|ZMU43082 Zea mays T cytoplasm male sterility restore... 109 2e-21
14gb|AF215823.2| Zea mays T cytoplasm male sterility restorer fact... 107 7e-21
15gb|AF318144.1|AF318142S3 Zea mays clone RXQ68 T cytoplasm male s... 107 7e-21
16gb|AF318141.1|AF318139S3 Zea mays clone RXQ70 T cytoplasm male s... 107 7e-21
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 107 7e-21
18dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 107 7e-21
19dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic D... 107 7e-21
20gb|AF318132.1|AF318130S3 Zea mays T cytoplasm male sterility res... 105 3e-20
21gb|AF318137.1|AF318136S2 Zea mays T cytoplasm male sterility res... 98 7e-18
22ref|XM_741738.1| Aspergillus fumigatus Af293 aldehyde dehydrogen... 52 3e-04
23gb|AF465823.1|AF465822S2 Allium cepa aldehyde dehydrogenase mRNA... 48 0.005
24ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-L... 38 5.3
25gb|AC119220.11| Mus musculus chromosome 1, clone RP24-201K16, co... 38 5.3
26gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, co... 38 5.3
27ref|XM_538742.2| PREDICTED: Canis familiaris similar to aldehyde... 38 5.3
28gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, co... 38 5.3
29dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 5.3
30emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 5.3 
>dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde dehydrogenase ALDH2,
            complete cds
          Length = 2128

 Score =  220 bits (111), Expect = 7e-55
 Identities = 114/115 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 1346

                                                                   
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacccgacttaatgta 115
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1345 acttgtcaccacccgtcacaagggtggctccactgtcgacacccgacttaatgta 1291
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>dbj|AB084896.1| Secale cereale ALDH2b mRNA for mitochondrial aldehyde dehydrogenase,
            complete cds
          Length = 2162

 Score =  204 bits (103), Expect = 4e-50
 Identities = 112/115 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1498 tcatgccatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccta 1439

                                                                   
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacccgacttaatgta 115
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1438 acttgtcaccacccgtcacaagggtggctccactgtcgacacccgacttaatgta 1384
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>dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial aldehyde dehydrogenase,
            complete cds
          Length = 2159

 Score =  133 bits (67), Expect = 1e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            ||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 1540 tcatgccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcaccca 1481

                                                                   
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacccgacttaatgta 115
            || | |||||||||||||||||| | ||| ||||||| ||||| ||| |||||||
Sbjct: 1480 acctatcaccacccgtcacaaggttagctccactgtcaacaccagacctaatgta 1426
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>gb|AF162665.1|AF162665 Oryza sativa aldehyde dehydrogenase (Aldh) mRNA, complete cds;
            nuclear gene for mitochondrial product
          Length = 2135

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1511 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 1452

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 1451 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1409
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>dbj|AK120296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051L04, full
            insert sequence
          Length = 2120

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1522 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 1463

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 1462 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1420
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>dbj|AK100358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K19, full
            insert sequence
          Length = 2681

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 2080 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 2021

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 2020 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1978
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>dbj|AK099248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E11, full
            insert sequence
          Length = 2121

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1522 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 1463

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 1462 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1420
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>dbj|AK073079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005P04, full
            insert sequence
          Length = 2144

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1546 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 1487

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 1486 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1444
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>dbj|AK061794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F11, full
           insert sequence
          Length = 1078

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
           |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 478 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 419

                                                      
Query: 61  acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
           |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 418 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 376
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>dbj|AB044537.1| Oryza sativa (japonica cultivar-group) mRNA for aldehyde
            dehydrogenase ALDH2b, complete cds
          Length = 2115

 Score =  117 bits (59), Expect = 7e-24
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcaccca 60
            |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1497 tcatgttatcctgtacatccgagaaaattgttggctggatgtagtaacctttgtcaccta 1438

                                                       
Query: 61   acttgtcaccacccgtcacaagggtggcttcactgtcgacacc 103
            |  |||| ||||| ||||||||| ||||| ||||||| |||||
Sbjct: 1437 atctgtcgccaccagtcacaaggttggctccactgtcaacacc 1395
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>gb|AF269064.1|AF269064 Zea mays T-cytoplasm male sterility restorer factor 2 (rf2) mRNA,
            rf2-R213 allele, complete cds; nuclear gene for
            mitochondrial product
          Length = 1868

 Score =  109 bits (55), Expect = 2e-21
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                        
Query: 9    tcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtca 68
            ||||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | |||
Sbjct: 1464 tcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatca 1405

                                               
Query: 69   ccacccgtcacaagggtggcttcactgtcgacacc 103
            ||||||||||||||||| ||| ||| ||| |||||
Sbjct: 1404 ccacccgtcacaagggtagctccaccgtcaacacc 1370
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>gb|AY109113.1| Zea mays PCO108969 mRNA sequence
          Length = 2189

 Score =  109 bits (55), Expect = 2e-21
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                        
Query: 9    tcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtca 68
            ||||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | |||
Sbjct: 1542 tcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatca 1483

                                               
Query: 69   ccacccgtcacaagggtggcttcactgtcgacacc 103
            ||||||||||||||||| ||| ||| ||| |||||
Sbjct: 1482 ccacccgtcacaagggtagctccaccgtcaacacc 1448
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>gb|U43082.1|ZMU43082 Zea mays T cytoplasm male sterility restorer factor 2 (rf2) mRNA,
            complete cds
          Length = 2195

 Score =  109 bits (55), Expect = 2e-21
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                        
Query: 9    tcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtca 68
            ||||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | |||
Sbjct: 1569 tcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatca 1510

                                               
Query: 69   ccacccgtcacaagggtggcttcactgtcgacacc 103
            ||||||||||||||||| ||| ||| ||| |||||
Sbjct: 1509 ccacccgtcacaagggtagctccaccgtcaacacc 1475
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>gb|AF215823.2| Zea mays T cytoplasm male sterility restorer factor 2 (rf2a) gene,
             rf2a-B73 allele, complete cds
          Length = 17474

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 10    cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
             |||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | ||||
Sbjct: 15096 cctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcac 15037

                                               
Query: 70    cacccgtcacaagggtggcttcactgtcgacacc 103
             |||||||||||||||| ||| ||| ||| |||||
Sbjct: 15036 cacccgtcacaagggtagctccaccgtcaacacc 15003
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>gb|AF318144.1|AF318142S3 Zea mays clone RXQ68 T cytoplasm male sterility restorer factor 2
           (rf2) gene, Rf2'1036W110 allele, partial cds
          Length = 530

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                       
Query: 10  cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
           |||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | ||||
Sbjct: 478 cctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcac 419

                                             
Query: 70  cacccgtcacaagggtggcttcactgtcgacacc 103
           |||||||||||||||| ||| ||| ||| |||||
Sbjct: 418 cacccgtcacaagggtagctccaccgtcaacacc 385
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>gb|AF318141.1|AF318139S3 Zea mays clone RXQ70 T cytoplasm male sterility restorer factor 2
           (rf2) gene, Rf2'1036W103 allele, partial sequence
          Length = 688

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                       
Query: 10  cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
           |||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | ||||
Sbjct: 486 cctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcac 427

                                             
Query: 70  cacccgtcacaagggtggcttcactgtcgacacc 103
           |||||||||||||||| ||| ||| ||| |||||
Sbjct: 426 cacccgtcacaagggtagctccaccgtcaacacc 393
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                           
Query: 10      cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
               |||| ||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |
Sbjct: 9106350 cctgtacatccgagaaaattgttggctggatgtagtaacctttgtcacctaatctgtcgc 9106291

                                                 
Query: 70      cacccgtcacaagggtggcttcactgtcgacacc 103
               |||| ||||||||| ||||| ||||||| |||||
Sbjct: 9106290 caccagtcacaaggttggctccactgtcaacacc 9106257
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>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0662B01
          Length = 155913

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                       
Query: 10  cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
           |||| ||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |
Sbjct: 372 cctgtacatccgagaaaattgttggctggatgtagtaacctttgtcacctaatctgtcgc 313

                                             
Query: 70  cacccgtcacaagggtggcttcactgtcgacacc 103
           |||| ||||||||| ||||| ||||||| |||||
Sbjct: 312 caccagtcacaaggttggctccactgtcaacacc 279
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>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0084K06
          Length = 177895

 Score =  107 bits (54), Expect = 7e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 10     cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
              |||| ||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |
Sbjct: 153668 cctgtacatccgagaaaattgttggctggatgtagtaacctttgtcacctaatctgtcgc 153609

                                                
Query: 70     cacccgtcacaagggtggcttcactgtcgacacc 103
              |||| ||||||||| ||||| ||||||| |||||
Sbjct: 153608 caccagtcacaaggttggctccactgtcaacacc 153575
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>gb|AF318132.1|AF318130S3 Zea mays T cytoplasm male sterility restorer factor 2 (rf2) gene,
           rf2-m8904 allele, exons 8-10 and partial cds
          Length = 726

 Score =  105 bits (53), Expect = 3e-20
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                       
Query: 15  acatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcaccaccc 74
           |||||||||||||| ||||||||||||||| |||| |||||||||||| | |||||||||
Sbjct: 484 acatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcaccaccc 425

                                        
Query: 75  gtcacaagggtggcttcactgtcgacacc 103
           ||||||||||| ||| ||| ||| |||||
Sbjct: 424 gtcacaagggtagctccaccgtcaacacc 396
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>gb|AF318137.1|AF318136S2 Zea mays T cytoplasm male sterility restorer factor 2 (Rf2) gene,
           Rf2-B77 allele, exons 8-10 and partial cds
          Length = 695

 Score = 97.6 bits (49), Expect = 7e-18
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  cctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcac 69
           |||| |||| ||||||||| ||||||||||||||| |||| |||||||||||| | ||||
Sbjct: 506 cctggacatttgagaaaatngttggctggatgtagaaacccttgtcacccaacctatcac 447

                           
Query: 70  cacccgtcacaagggt 85
           ||||||||||||||||
Sbjct: 446 cacccgtcacaagggt 431
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>ref|XM_741738.1| Aspergillus fumigatus Af293 aldehyde dehydrogenase (Afu7g01000)
            partial mRNA
          Length = 1482

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 1    tcatgtcatcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacc 58
            ||||||| || |||||||| | |||||| || ||||||||||||||||| || |||||
Sbjct: 1165 tcatgtcttcatgcacatcggcgaaaatggtaggctggatgtagtaacccttttcacc 1108
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>gb|AF465823.1|AF465822S2 Allium cepa aldehyde dehydrogenase mRNA, partial cds
          Length = 862

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 6   tcatcctgcacatctgagaaaattgttggctggatgtagtaacctttg 53
           |||||||  |||||||||||||| || || ||||||||||| ||||||
Sbjct: 363 tcatccttgacatctgagaaaatagtgggttggatgtagtaccctttg 316
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>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
            1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
            complete cds
          Length = 5589

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 14   cacatctgagaaaattgtt 32
            |||||||||||||||||||
Sbjct: 2396 cacatctgagaaaattgtt 2378
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>gb|AC119220.11| Mus musculus chromosome 1, clone RP24-201K16, complete sequence
          Length = 162827

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     acatctgagaaaattgttg 33
              |||||||||||||||||||
Sbjct: 136603 acatctgagaaaattgttg 136621
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>gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, complete sequence
          Length = 184718

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 55   cacccaacttgtcaccacc 73
            |||||||||||||||||||
Sbjct: 9448 cacccaacttgtcaccacc 9466
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>ref|XM_538742.2| PREDICTED: Canis familiaris similar to aldehyde dehydrogenase 1B1
            precursor (LOC481620), mRNA
          Length = 1563

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    tcatgtcatcctgcacatc 19
            |||||||||||||||||||
Sbjct: 1240 tcatgtcatcctgcacatc 1222
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>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence
          Length = 177771

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    cacccaacttgtcaccacc 73
             |||||||||||||||||||
Sbjct: 78838 cacccaacttgtcaccacc 78856
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>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
          Length = 70098

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    cacatctgagaaaattgtt 32
             |||||||||||||||||||
Sbjct: 58040 cacatctgagaaaattgtt 58022
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 66      tcaccacccgtcacaaggg 84
               |||||||||||||||||||
Sbjct: 3238099 tcaccacccgtcacaaggg 3238081


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 804,755
Number of Sequences: 3902068
Number of extensions: 804755
Number of successful extensions: 54020
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53972
Number of HSP's gapped (non-prelim): 48
length of query: 115
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 94
effective length of database: 17,151,101,840
effective search space: 1612203572960
effective search space used: 1612203572960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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