| Clone Name | rbags37k05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D26105.1|BLYHEMH1 Barley mRNA for ferrochelatase Length = 1728 Score = 1419 bits (716), Expect = 0.0 Identities = 716/716 (100%) Strand = Plus / Minus Query: 18 caagttataaattattcaacggtctatatggtttctagttacaatcaccaaaatggttaa 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1633 caagttataaattattcaacggtctatatggtttctagttacaatcaccaaaatggttaa 1574 Query: 78 ccacgttgcatcgataaaaataagcagctcactgaagagtgttccggaaagcagaaacta 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1573 ccacgttgcatcgataaaaataagcagctcactgaagagtgttccggaaagcagaaacta 1514 Query: 138 gcctcggcgataacagcaggaagaaggccaggaccgagcccaagaacatcttggtcagat 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1513 gcctcggcgataacagcaggaagaaggccaggaccgagcccaagaacatcttggtcagat 1454 Query: 198 aatgcatcatgtccatgtcagagtcagtatccttgacctttctggtcgccatcgcggagg 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1453 aatgcatcatgtccatgtcagagtcagtatccttgacctttctggtcgccatcgcggagg 1394 Query: 258 cagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgaggtgcatc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 cagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgaggtgcatc 1334 Query: 318 caagagctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtact 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 caagagctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtact 1274 Query: 378 ccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagcttactgggacagcca 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 ccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagcttactgggacagcca 1214 Query: 438 ggagactcttaacacccttttgaccaagttcaactaaaacttcatcagtatatggcttaa 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1213 ggagactcttaacacccttttgaccaagttcaactaaaacttcatcagtatatggcttaa 1154 Query: 498 gccattgaactggtcccacgcgactctggtaggccagagtatggtcattcaaggttcctc 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 gccattgaactggtcccacgcgactctggtaggccagagtatggtcattcaaggttcctc 1094 Query: 558 tggatttcaactcctccatgatcaaagcaatgcagtcttccatctgatctctgtatggat 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 tggatttcaactcctccatgatcaaagcaatgcagtcttccatctgatctctgtatggat 1034 Query: 618 ctccagcatccttaacataggtaagtggtactccatgtgcactgaagaatatcataacct 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1033 ctccagcatccttaacataggtaagtggtactccatgtgcactgaagaatatcataacct 974 Query: 678 cttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgatttc 733 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 973 cttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgatttc 918
>gb|AF020791.1|AF020791 Hordeum vulgare ferrochelatase (hemH) gene, complete cds Length = 7694 Score = 805 bits (406), Expect = 0.0 Identities = 406/406 (100%) Strand = Plus / Minus Query: 18 caagttataaattattcaacggtctatatggtttctagttacaatcaccaaaatggttaa 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6900 caagttataaattattcaacggtctatatggtttctagttacaatcaccaaaatggttaa 6841 Query: 78 ccacgttgcatcgataaaaataagcagctcactgaagagtgttccggaaagcagaaacta 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6840 ccacgttgcatcgataaaaataagcagctcactgaagagtgttccggaaagcagaaacta 6781 Query: 138 gcctcggcgataacagcaggaagaaggccaggaccgagcccaagaacatcttggtcagat 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6780 gcctcggcgataacagcaggaagaaggccaggaccgagcccaagaacatcttggtcagat 6721 Query: 198 aatgcatcatgtccatgtcagagtcagtatccttgacctttctggtcgccatcgcggagg 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6720 aatgcatcatgtccatgtcagagtcagtatccttgacctttctggtcgccatcgcggagg 6661 Query: 258 cagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgaggtgcatc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6660 cagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgaggtgcatc 6601 Query: 318 caagagctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtact 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6600 caagagctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtact 6541 Query: 378 ccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 423 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6540 ccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 6495 Score = 307 bits (155), Expect = 3e-80 Identities = 155/155 (100%) Strand = Plus / Minus Query: 523 ctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatgatcaa 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5678 ctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatgatcaa 5619 Query: 583 agcaatgcagtcttccatctgatctctgtatggatctccagcatccttaacataggtaag 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5618 agcaatgcagtcttccatctgatctctgtatggatctccagcatccttaacataggtaag 5559 Query: 643 tggtactccatgtgcactgaagaatatcataacct 677 ||||||||||||||||||||||||||||||||||| Sbjct: 5558 tggtactccatgtgcactgaagaatatcataacct 5524 Score = 206 bits (104), Expect = 8e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 422 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6012 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 5953 Query: 482 tcagtatatggcttaagccattgaactggtcccacgcgactctg 525 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5952 tcagtatatggcttaagccattgaactggtcccacgcgactctg 5909 Score = 121 bits (61), Expect = 3e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 673 aacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgattt 732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4547 aacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgattt 4488 Query: 733 c 733 | Sbjct: 4487 c 4487
>dbj|AK068174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M17, full insert sequence Length = 1963 Score = 601 bits (303), Expect = e-168 Identities = 438/483 (90%) Strand = Plus / Minus Query: 251 gcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgag 310 ||||| || ||||| ||||||||||| || || ||||| ||||| ||||||||||||||| Sbjct: 1490 gcggaagcggagggcagggcttcgaccactgcatcagcaaggtcggagatgaaggatgag 1431 Query: 311 gtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagagccaactcc 370 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 1430 gtgcatccaagagctggaacccttccccagttctcgatgcccgattctagagccagctcc 1371 Query: 371 ctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagcttactggg 430 |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1370 ttgtactccatgtcgatttcttccaaggtctcgatgtgctcgctcacaaagcttactgga 1311 Query: 431 acagccaggagactcttaacacccttttgaccaagttcaactaaaacttcatcagtatat 490 ||||||||||| ||||| ||||||| |||||| |||||||||| |||||||||||||||| Sbjct: 1310 acagccaggaggctctttacaccctgttgacctagttcaactagaacttcatcagtatat 1251 Query: 491 ggcttaagccattgaactggtcccacgcgactctggtaggccagagtatggtcattcaag 550 || || ||||| |||||||| ||||| ||||||||||| |||||||||||| || ||| Sbjct: 1250 ggtttcagccactgaactggccccactcgactctggtaagccagagtatggctgtttaag 1191 Query: 551 gttcctctggatttcaactcctccatgatcaaagcaatgcagtcttccatctgatctctg 610 ||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 1190 attcctctggattttaactctcccatgatcaaagcaatgcagtcctccatctgatctctg 1131 Query: 611 tatggatctccagcatccttaacataggtaagtggtactccatgtgcactgaagaatatc 670 || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 taaggatctccagcatccgtaacataggtaagtggtactccatgtgcactgaagaatatc 1071 Query: 671 ataacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgat 730 ||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||| Sbjct: 1070 ataacctcttcaggattggaaaaaattgacagttccttttcaattaagtcagccattgat 1011 Query: 731 ttc 733 ||| Sbjct: 1010 ttc 1008 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 116 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 175 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 1625 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 1566 Query: 176 cccaagaacatcttggtcagataatgcatcatgtccatgtc 216 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 1565 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 1525
>gb|AY108431.1| Zea mays PCO068191 mRNA sequence Length = 1776 Score = 498 bits (251), Expect = e-137 Identities = 437/499 (87%) Strand = Plus / Minus Query: 235 ctttctggtcgccatcgcggaggcagagggaagggcttcgacgacagcgtcagcgaggtc 294 |||||||||||| | ||| || |||||||| ||||||||||||||||| || || ||||| Sbjct: 1389 ctttctggtcgcgagcgctgaagcagagggcagggcttcgacgacagcatctgcaaggtc 1330 Query: 295 cgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccga 354 |||||||| | ||| |||||||||||||| ||||||| |||||||||| ||||| || Sbjct: 1329 ggagatgaatgttgaagtgcatccaagagcaggaacccgaccccagttcttgatgcctga 1270 Query: 355 ctctagagccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgct 414 || |||||||||||| ||||||||||||| |||||||||| |||||| || ||||| || Sbjct: 1269 ttccagagccaactccttgtactccatgtcaatttcttccaatgtctcgatgtgctcact 1210 Query: 415 cacaaagcttactgggacagccaggagactcttaacacccttttgaccaagttcaactaa 474 ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1209 cacaaagcttactggaacagccaggaggctcttcacacccttttgaccaagttctactaa 1150 Query: 475 aacttcatcagtatatggcttaagccattgaactggtcccacgcgactctggtaggccag 534 ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 1149 aacttcatcagtatatggcttcagccattgaactggccccacccgactctggtacgccaa 1090 Query: 535 agtatggtcattcaaggttcctctggatttcaactcctccatgatcaaagcaatgcagtc 594 ||| || ||| ||| ||||||| ||| | |||||| |||||||||||||||| || || Sbjct: 1089 agtgtgactatttaagattcctcttgatcttaactcccccatgatcaaagcaatacaatc 1030 Query: 595 ttccatctgatctctgtatggatctccagcatccttaacataggtaagtggtactccatg 654 ||||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||| Sbjct: 1029 ctccatctgatctctgtaaggatctccagcatcctcaacataggtaagtggcacaccatg 970 Query: 655 tgcactgaagaatatcataacctcttcaggattcgaaaaaacagatagttccttctcaat 714 ||||||||||||||||||||||||||||||||| || || | || || ||||| ||||| Sbjct: 969 tgcactgaagaatatcataacctcttcaggattggagaaggcggagagctccttttcaat 910 Query: 715 taagtcagccattgatttc 733 || ||||| |||||||||| Sbjct: 909 taggtcagacattgatttc 891 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Minus Query: 120 tccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagccca 179 ||||||| || ||||||||||| || |||| |||||||| || |||| || ||||| | Sbjct: 1504 tccggaaggcggaaactagccttggtgatagcagcaggacaaatgccaagattgagccaa 1445 Query: 180 agaacatcttggtcagataatgcatcatgtccatg 214 | | ||||||||| || |||||| ||| ||||||| Sbjct: 1444 acagcatcttggtgaggtaatgcgtcaggtccatg 1410
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 523 ctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatgatcaa 582 |||||| |||||||||||| || ||| ||||||||||||| ||||| |||||||||| Sbjct: 7149091 ctggtaagccagagtatggctgtttaagattcctctggattttaactctcccatgatcaa 7149032 Query: 583 agcaatgcagtcttccatctgatctctgtatggatctccagcatccttaacataggtaag 642 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 7149031 agcaatgcagtcctccatctgatctctgtaaggatctccagcatccgtaacataggtaag 7148972 Query: 643 tggtactccatgtgcactgaagaatatcataacct 677 ||||||||||||||||||||||||||||||||||| Sbjct: 7148971 tggtactccatgtgcactgaagaatatcataacct 7148937 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Minus Query: 251 gcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgag 310 ||||| || ||||| ||||||||||| || || ||||| ||||| ||||||||||||||| Sbjct: 7150082 gcggaagcggagggcagggcttcgaccactgcatcagcaaggtcggagatgaaggatgag 7150023 Query: 311 gtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagagccaactcc 370 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 7150022 gtgcatccaagagctggaacccttccccagttctcgatgcccgattctagagccagctcc 7149963 Query: 371 ctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 423 |||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 7149962 ttgtactccatgtcgatttcttccaaggtctcgatgtgctcgctcacaaagct 7149910 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 422 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 481 |||||||| ||||||||||| ||||| ||||||| |||||| |||||||||| ||||||| Sbjct: 7149426 cttactggaacagccaggaggctctttacaccctgttgacctagttcaactagaacttca 7149367 Query: 482 tcagtatatggcttaagccattgaactggtcccacgcgactctg 525 ||||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 7149366 tcagtatatggtttcagccactgaactggccccactcgactctg 7149323 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 673 aacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgattt 732 ||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 7148250 aacctcttcaggattggaaaaaattgacagttccttttcaattaagtcagccattgattt 7148191 Query: 733 c 733 | Sbjct: 7148190 c 7148190 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 116 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 175 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 7150217 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 7150158 Query: 176 cccaagaacatcttggtcagataatgcatcatgtccatgtc 216 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 7150157 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 7150117
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 523 ctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatgatcaa 582 |||||| |||||||||||| || ||| ||||||||||||| ||||| |||||||||| Sbjct: 1196 ctggtaagccagagtatggctgtttaagattcctctggattttaactctcccatgatcaa 1137 Query: 583 agcaatgcagtcttccatctgatctctgtatggatctccagcatccttaacataggtaag 642 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 1136 agcaatgcagtcctccatctgatctctgtaaggatctccagcatccgtaacataggtaag 1077 Query: 643 tggtactccatgtgcactgaagaatatcataacct 677 ||||||||||||||||||||||||||||||||||| Sbjct: 1076 tggtactccatgtgcactgaagaatatcataacct 1042 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Minus Query: 251 gcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgag 310 ||||| || ||||| ||||||||||| || || ||||| ||||| ||||||||||||||| Sbjct: 2187 gcggaagcggagggcagggcttcgaccactgcatcagcaaggtcggagatgaaggatgag 2128 Query: 311 gtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagagccaactcc 370 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 2127 gtgcatccaagagctggaacccttccccagttctcgatgcccgattctagagccagctcc 2068 Query: 371 ctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 423 |||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 2067 ttgtactccatgtcgatttcttccaaggtctcgatgtgctcgctcacaaagct 2015 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 422 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 481 |||||||| ||||||||||| ||||| ||||||| |||||| |||||||||| ||||||| Sbjct: 1531 cttactggaacagccaggaggctctttacaccctgttgacctagttcaactagaacttca 1472 Query: 482 tcagtatatggcttaagccattgaactggtcccacgcgactctg 525 ||||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 1471 tcagtatatggtttcagccactgaactggccccactcgactctg 1428 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 673 aacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgattt 732 ||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 355 aacctcttcaggattggaaaaaattgacagttccttttcaattaagtcagccattgattt 296 Query: 733 c 733 | Sbjct: 295 c 295 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 116 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 175 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 2322 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 2263 Query: 176 cccaagaacatcttggtcagataatgcatcatgtccatgtc 216 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 2262 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 2222
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 523 ctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatgatcaa 582 |||||| |||||||||||| || ||| ||||||||||||| ||||| |||||||||| Sbjct: 101170 ctggtaagccagagtatggctgtttaagattcctctggattttaactctcccatgatcaa 101111 Query: 583 agcaatgcagtcttccatctgatctctgtatggatctccagcatccttaacataggtaag 642 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 101110 agcaatgcagtcctccatctgatctctgtaaggatctccagcatccgtaacataggtaag 101051 Query: 643 tggtactccatgtgcactgaagaatatcataacct 677 ||||||||||||||||||||||||||||||||||| Sbjct: 101050 tggtactccatgtgcactgaagaatatcataacct 101016 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Minus Query: 251 gcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatgaaggatgag 310 ||||| || ||||| ||||||||||| || || ||||| ||||| ||||||||||||||| Sbjct: 102161 gcggaagcggagggcagggcttcgaccactgcatcagcaaggtcggagatgaaggatgag 102102 Query: 311 gtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagagccaactcc 370 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 102101 gtgcatccaagagctggaacccttccccagttctcgatgcccgattctagagccagctcc 102042 Query: 371 ctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 423 |||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 102041 ttgtactccatgtcgatttcttccaaggtctcgatgtgctcgctcacaaagct 101989 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 422 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 481 |||||||| ||||||||||| ||||| ||||||| |||||| |||||||||| ||||||| Sbjct: 101505 cttactggaacagccaggaggctctttacaccctgttgacctagttcaactagaacttca 101446 Query: 482 tcagtatatggcttaagccattgaactggtcccacgcgactctg 525 ||||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 101445 tcagtatatggtttcagccactgaactggccccactcgactctg 101402 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 673 aacctcttcaggattcgaaaaaacagatagttccttctcaattaagtcagccattgattt 732 ||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 100329 aacctcttcaggattggaaaaaattgacagttccttttcaattaagtcagccattgattt 100270 Query: 733 c 733 | Sbjct: 100269 c 100269 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 116 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 175 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 102296 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 102237 Query: 176 cccaagaacatcttggtcagataatgcatcatgtccatgtc 216 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 102236 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 102196
>dbj|D26106.1|CUSHEMH2 Cucumber mRNA for ferrochelatase Length = 1763 Score = 157 bits (79), Expect = 6e-35 Identities = 240/291 (82%), Gaps = 2/291 (0%) Strand = Plus / Minus Query: 398 gtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacacccttt 457 |||||||| ||||| ||||||||||| || || || || ||||||||||||| |||||| Sbjct: 1275 gtctcaatgtgctcactcacaaagctcacgggaacggctaggagactcttaatacccttc 1216 Query: 458 tgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtcccacg 517 || ||||| ||||| | ||||||||| || ||||||||||||||||| || ||||| || Sbjct: 1215 tggccaagctcaacaagaacttcatctgtgtatggcttaagccattgtacaggtccaaca 1156 Query: 518 cgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctccatg 577 || |||||||| || |||||||| |||||| ||||||||| ||||| ||| | |||| Sbjct: 1155 cggctctggtatgcaagagtatgctcattcccaattcctctggctttcagctcttgcatg 1096 Query: 578 atcaaagca-atgcagtcttccatctgatctctgtatggatctccagcatccttaacata 636 || | ||| ||||| |||||||| |||||| |||||||||||||||||| || |||||| Sbjct: 1095 at-taggcagatgcactcttccatttgatctttgtatggatctccagcattctcaacata 1037 Query: 637 ggtaagtggtactccatgtgcactgaagaatatcataacctcttcaggatt 687 | | || || ||||||||||| ||||| ||||| ||||||| |||||| Sbjct: 1036 actgacgggaaccccatgtgcactaaagaaaatcatgacctcttgaggatt 986
>gb|AY107322.1| Zea mays PCO069079 mRNA sequence Length = 389 Score = 137 bits (69), Expect = 6e-29 Identities = 219/269 (81%) Strand = Plus / Minus Query: 116 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 175 |||||||||||||||||||| || || || || |||||||||| || |||| || ||| Sbjct: 276 gtgttccggaaagcagaaaccagtcttggtgacaacagcaggataaatgccaagattgag 217 Query: 176 cccaagaacatcttggtcagataatgcatcatgtccatgtcagagtcagtatccttgacc 235 || ||||||||||||||||| |||||||||| |||||| || || || || | | Sbjct: 216 ccgaagaacatcttggtcaggtaatgcatcagatccatgctggaatcggtgtcttcaggc 157 Query: 236 tttctggtcgccatcgcggaggcagagggaagggcttcgacgacagcgtcagcgaggtcc 295 |||||||| ||| ||| |||||||| || ||||||||||| || || || || ||||| Sbjct: 156 tttctggttcccagcgccgaggcagatgggagggcttcgacaaccgcatctgcaaggtcg 97 Query: 296 gagatgaaggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccgac 355 |||||||| | || |||||||||||||| || |||| ||||||||||||||||| || Sbjct: 96 gagatgaaagtcgaagtgcatccaagagcagggacccggccccagttctcaatgcctgat 37 Query: 356 tctagagccaactccctgtactccatgtc 384 || |||||||||||| ||||||||||||| Sbjct: 36 tccagagccaactccttgtactccatgtc 8
>ref|NM_122504.3| Arabidopsis thaliana ferrochelatase AT5G26030 transcript variant AT5G26030.1 mRNA, complete cds Length = 2038 Score = 97.6 bits (49), Expect = 5e-17 Identities = 273/345 (79%), Gaps = 2/345 (0%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1384 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1325 Query: 395 agtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacaccc 454 ||||||||||| ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct: 1324 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacca 1265 Query: 455 ttttgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtccc 514 | | |||||| || || | ||| ||||| || |||||||| ||||||||||| || || Sbjct: 1264 ctcttaccaaggtcgacaagaacctcatcggtgtatggcttcagccattgaacagggcca 1205 Query: 515 acgcgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctcc 574 || ||||||||||| |||| ||||||| || | ||||||| ||| | ||| ||| Sbjct: 1204 acacgactctggtatgccaatttatggtcgttaagaacccctctggcttttagctcttcc 1145 Query: 575 atgatcaaagcaatgcagtcttccatctgatctct-gtatggatctccagcatccttaac 633 || ||||| |||| || ||||||||||| | ||| ||| ||||||||||||| || || Sbjct: 1144 attatcaagtcaatacactcttccatctgct-tctggtacggatctccagcattctctac 1086 Query: 634 ataggtaagtggtactccatgtgcactgaagaatatcataacctc 678 ||| | | || || ||||| ||||||||||||||||||||||| Sbjct: 1085 gtagctgaccggaacaccatgggcactgaagaatatcataacctc 1041
>ref|NM_001036864.1| Arabidopsis thaliana ferrochelatase AT5G26030 transcript variant AT5G26030.2 mRNA, complete cds Length = 1976 Score = 97.6 bits (49), Expect = 5e-17 Identities = 273/345 (79%), Gaps = 2/345 (0%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1384 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1325 Query: 395 agtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacaccc 454 ||||||||||| ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct: 1324 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacca 1265 Query: 455 ttttgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtccc 514 | | |||||| || || | ||| ||||| || |||||||| ||||||||||| || || Sbjct: 1264 ctcttaccaaggtcgacaagaacctcatcggtgtatggcttcagccattgaacagggcca 1205 Query: 515 acgcgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctcc 574 || ||||||||||| |||| ||||||| || | ||||||| ||| | ||| ||| Sbjct: 1204 acacgactctggtatgccaatttatggtcgttaagaacccctctggcttttagctcttcc 1145 Query: 575 atgatcaaagcaatgcagtcttccatctgatctct-gtatggatctccagcatccttaac 633 || ||||| |||| || ||||||||||| | ||| ||| ||||||||||||| || || Sbjct: 1144 attatcaagtcaatacactcttccatctgct-tctggtacggatctccagcattctctac 1086 Query: 634 ataggtaagtggtactccatgtgcactgaagaatatcataacctc 678 ||| | | || || ||||| ||||||||||||||||||||||| Sbjct: 1085 gtagctgaccggaacaccatgggcactgaagaatatcataacctc 1041
>emb|X73417.1|ATHEM15A A.thaliana HEM15 mRNA for ferrochelatase Length = 1867 Score = 97.6 bits (49), Expect = 5e-17 Identities = 273/345 (79%), Gaps = 2/345 (0%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1235 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1176 Query: 395 agtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacaccc 454 ||||||||||| ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct: 1175 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacca 1116 Query: 455 ttttgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtccc 514 | | |||||| || || | ||| ||||| || |||||||| ||||||||||| || || Sbjct: 1115 ctcttaccaaggtcgacaagaacctcatcggtgtatggcttcagccattgaacagggcca 1056 Query: 515 acgcgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctcc 574 || ||||||||||| |||| ||||||| || | ||||||| ||| | ||| ||| Sbjct: 1055 acacgactctggtatgccaatttatggtcgttaagaacccctctggcttttagctcttcc 996 Query: 575 atgatcaaagcaatgcagtcttccatctgatctct-gtatggatctccagcatccttaac 633 || ||||| |||| || ||||||||||| | ||| ||| ||||||||||||| || || Sbjct: 995 attatcaagtcaatacactcttccatctgct-tctggtacggatctccagcattctctac 937 Query: 634 ataggtaagtggtactccatgtgcactgaagaatatcataacctc 678 ||| | | || || ||||| ||||||||||||||||||||||| Sbjct: 936 gtagctgaccggaacaccatgggcactgaagaatatcataacctc 892
>gb|AY078959.1| Arabidopsis thaliana AT5g26030/T1N24_17 mRNA, complete sequence Length = 1960 Score = 97.6 bits (49), Expect = 5e-17 Identities = 273/345 (79%), Gaps = 2/345 (0%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1341 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1282 Query: 395 agtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacaccc 454 ||||||||||| ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct: 1281 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacca 1222 Query: 455 ttttgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtccc 514 | | |||||| || || | ||| ||||| || |||||||| ||||||||||| || || Sbjct: 1221 ctcttaccaaggtcgacaagaacctcatcggtgtatggcttcagccattgaacagggcca 1162 Query: 515 acgcgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctcc 574 || ||||||||||| |||| ||||||| || | ||||||| ||| | ||| ||| Sbjct: 1161 acacgactctggtatgccaatttatggtcgttaagaacccctctggcttttagctcttcc 1102 Query: 575 atgatcaaagcaatgcagtcttccatctgatctct-gtatggatctccagcatccttaac 633 || ||||| |||| || ||||||||||| | ||| ||| ||||||||||||| || || Sbjct: 1101 attatcaagtcaatacactcttccatctgct-tctggtacggatctccagcattctctac 1043 Query: 634 ataggtaagtggtactccatgtgcactgaagaatatcataacctc 678 ||| | | || || ||||| ||||||||||||||||||||||| Sbjct: 1042 gtagctgaccggaacaccatgggcactgaagaatatcataacctc 998
>emb|BX832323.1|CNS09ZTO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 97.6 bits (49), Expect = 5e-17 Identities = 273/345 (79%), Gaps = 2/345 (0%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1227 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1168 Query: 395 agtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaacaccc 454 ||||||||||| ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct: 1167 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacca 1108 Query: 455 ttttgaccaagttcaactaaaacttcatcagtatatggcttaagccattgaactggtccc 514 | | |||||| || || | ||| ||||| || |||||||| ||||||||||| || || Sbjct: 1107 ctcttaccaaggtcgacaagaacctcatcggtgtatggcttcagccattgaacagggcca 1048 Query: 515 acgcgactctggtaggccagagtatggtcattcaaggttcctctggatttcaactcctcc 574 || ||||||||||| |||| ||||||| || | ||||||| ||| | ||| ||| Sbjct: 1047 acacgactctggtatgccaatttatggtcgttaagaacccctctggcttttagctcttcc 988 Query: 575 atgatcaaagcaatgcagtcttccatctgatctct-gtatggatctccagcatccttaac 633 || ||||| |||| || ||||||||||| | ||| ||| ||||||||||||| || || Sbjct: 987 attatcaagtcaatacactcttccatctgct-tctggtacggatctccagcattctctac 929 Query: 634 ataggtaagtggtactccatgtgcactgaagaatatcataacctc 678 ||| | | || || ||||| ||||||||||||||||||||||| Sbjct: 928 gtagctgaccggaacaccatgggcactgaagaatatcataacctc 884
>emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 on chromosome 3, complete sequence Length = 107411 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 359 agagccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcaca 418 |||||||| ||||||||||||||||| |||||||| || ||||| || ||||| |||||| Sbjct: 46850 agagccaattccctgtactccatgtcaatttcttcaagagtctctatgtgctcactcaca 46909 Query: 419 aagct 423 ||||| Sbjct: 46910 aagct 46914 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 701 agttccttctcaattaagtcagccattga 729 ||||| ||||||||||||||||||||||| Sbjct: 47683 agttctttctcaattaagtcagccattga 47711
>emb|AJ316569.1|NTA316569 Nicotiana tabacum mRNA for ferrochelatase precursor (FeCh gene) Length = 2118 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 609 tgtatggatctccagcatccttaacataggtaagtggtactccatgtgcactgaagaata 668 |||||||||| || || |||| ||||| | ||||||||| ||||| ||||||||||||| Sbjct: 951 tgtatggatcacctgcttcctctacatatgcaagtggtaccccatgagcactgaagaata 892 Query: 669 tcataacctc 678 |||| ||||| Sbjct: 891 tcatcacctc 882 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 479 tcatcagtatatggcttaagccattgaactggtcccacgcgactctggtaggccagagta 538 |||||||||||||| || ||||||| ||| ||||| || | |||||| ||||||| |||| Sbjct: 1081 tcatcagtatatggtttcagccattcaacaggtccaaccctactctgataggccaaagta 1022 Query: 539 t 539 | Sbjct: 1021 t 1021
>emb|AJ005802.1|STU5802 Solanum tuberosum, cultivar binje, mRNA for ferrochelatase Length = 2051 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 609 tgtatggatctccagcatccttaacataggtaagtggtactccatgtgcactgaagaata 668 |||||||||| || || |||| ||||| | ||||||||| ||||| ||||||||||||| Sbjct: 903 tgtatggatcacctgcttcctctacatatgcaagtggtacaccatgagcactgaagaata 844 Query: 669 tcataacctc 678 |||| ||||| Sbjct: 843 tcatcacctc 834 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 479 tcatcagtatatggcttaagccattgaactggtcccacgcgactctggtaggccagagta 538 |||||||||||||| |||||||||| ||| ||||| || | |||||| ||||||| |||| Sbjct: 1033 tcatcagtatatggtttaagccattcaacaggtccaaccctactctgataggccaaagta 974 Query: 539 t 539 | Sbjct: 973 t 973
>emb|Y13382.1|ATFERRCHI Arabidopsis thaliana ferrochelatase-I gene and promoter sequence Length = 4304 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 3656 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 3597 Query: 395 agtgtctcaatatgctcgctcac 417 ||||||||||| ||||| ||||| Sbjct: 3596 agtgtctcaatgtgctcactcac 3574 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Minus Query: 650 ccatgtgcactgaagaatatcataacct 677 ||||| |||||||||||||||||||||| Sbjct: 3110 ccatgggcactgaagaatatcataacct 3083 Score = 46.1 bits (23), Expect = 0.16 Identities = 71/87 (81%) Strand = Plus / Minus Query: 440 agactcttaacacccttttgaccaagttcaactaaaacttcatcagtatatggcttaagc 499 |||||||||||||| | | |||||| || || | ||| ||||| || |||||||| ||| Sbjct: 3415 agactcttaacaccactcttaccaaggtcgacaagaacctcatcggtgtatggcttcagc 3356 Query: 500 cattgaactggtcccacgcgactctgg 526 |||||||| || || || ||||||||| Sbjct: 3355 cattgaacagggccaacacgactctgg 3329
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 335 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 394 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 47611 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 47670 Query: 395 agtgtctcaatatgctcgctcac 417 ||||||||||| ||||| ||||| Sbjct: 47671 agtgtctcaatgtgctcactcac 47693 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 650 ccatgtgcactgaagaatatcataacct 677 ||||| |||||||||||||||||||||| Sbjct: 48158 ccatgggcactgaagaatatcataacct 48185 Score = 46.1 bits (23), Expect = 0.16 Identities = 71/87 (81%) Strand = Plus / Plus Query: 440 agactcttaacacccttttgaccaagttcaactaaaacttcatcagtatatggcttaagc 499 |||||||||||||| | | |||||| || || | ||| ||||| || |||||||| ||| Sbjct: 47854 agactcttaacaccactcttaccaaggtcgacaagaacctcatcggtgtatggcttcagc 47913 Query: 500 cattgaactggtcccacgcgactctgg 526 |||||||| || || || ||||||||| Sbjct: 47914 cattgaacagggccaacacgactctgg 47940
>gb|AF332962.1| Chlamydomonas reinhardtii ferrochelatase mRNA, complete cds Length = 2660 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 373 gtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 423 ||||||||||||||| || |||| |||||||| |||||||| |||||||| Sbjct: 1281 gtactccatgtcgatctcctccaacgtctcaatgtgctcgctgacaaagct 1231
>ref|NM_128592.2| Arabidopsis thaliana ferrochelatase AT2G30390 mRNA, complete cds Length = 1859 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1250 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1191 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1190 ccttttttaccaagttca 1173
>gb|BT008877.1| Arabidopsis thaliana At2g30390 mRNA, complete cds Length = 1539 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1145 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1086 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1085 ccttttttaccaagttca 1068
>gb|BT000465.1| Arabidopsis thaliana putative ferrochelatase precusor (At2g30390) mRNA, complete cds Length = 1860 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1251 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1192 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1191 ccttttttaccaagttca 1174
>emb|Y13156.1|ATFERROCH Arabidopsis thaliana mRNA for ferrochelatase Length = 1797 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1169 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1110 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1109 ccttttttaccaagttca 1092
>gb|AF428371.1|AF428371 Arabidopsis thaliana T9D9.20/T9D9.20 mRNA, complete cds Length = 1769 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1178 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1119 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1118 ccttttttaccaagttca 1101
>emb|BX820877.1|CNS0A9IA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1788 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1227 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1168 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1167 ccttttttaccaagttca 1150
>emb|BX820158.1|CNS0A82Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1795 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 392 tccagtgtctcaatatgctcgctcacaaagcttactgggacagccaggagactcttaaca 451 ||||| || ||||| |||||||||||||| |||| || |||||||| ||| | | |||| Sbjct: 1230 tccagagtttcaatgtgctcgctcacaaaacttatgggtacagccagaagattttcaaca 1171 Query: 452 cccttttgaccaagttca 469 || |||| |||||||||| Sbjct: 1170 ccttttttaccaagttca 1153
>gb|AY108152.1| Zea mays PCO129975 mRNA sequence Length = 1119 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Minus Query: 323 gctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtactccatg 382 |||||||||| ||||||| || ||||| || |||| ||||||||| ||||||||| Sbjct: 597 gctggaacccgtccccagtgcttgatgccagattctaaagccaactctttgtactccaca 538 Query: 383 tcgatttcttccagtgtctcaatatgctcgctcacaaa 420 ||||||||||||| || ||||| || ||||| ||||| Sbjct: 537 tcgatttcttccaaagtttcaatgtgttcgctaacaaa 500 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 273 actccatgagcactgaaaaatatcataacct 243
>gb|AC068993.14| Homo sapiens 12 BAC RP11-123M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186383 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 595 ttccatctgatctctgtatggatc 618 |||||||||||||||||||||||| Sbjct: 59006 ttccatctgatctctgtatggatc 58983
>ref|XM_475111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 929 actccatgggcactgaaaaatatcataacct 899
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 13972 actccatgggcactgaaaaatatcataacct 13942
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 63204 actccatgggcactgaaaaatatcataacct 63174
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 17069837 actccatgggcactgaaaaatatcataacct 17069807
>dbj|AK073873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J07, full insert sequence Length = 2270 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 1136 actccatgggcactgaaaaatatcataacct 1106
>dbj|AB007120.1| Oryza sativa mRNA for ferrochelatase, partial cds Length = 1736 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 647 actccatgtgcactgaagaatatcataacct 677 |||||||| |||||||| ||||||||||||| Sbjct: 834 actccatgggcactgaaaaatatcataacct 804
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 377 tccatgtcgatttcttccagtgtctc 402 |||||| ||||||||||||||||||| Sbjct: 1133001 tccatggcgatttcttccagtgtctc 1132976
>ref|NM_014191.1| Homo sapiens sodium channel, voltage gated, type VIII, alpha (SCN8A), mRNA Length = 7008 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 4349 tcttccatctgatctctgtat 4329
>gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete sequence Length = 128831 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 609 tgtatggatctccagcatccttaacataggtaagtggtactccatgtgcactgaagaata 668 |||||||||| ||||| || | ||||| | || ||| || |||||||| |||||||||| Sbjct: 126974 tgtatggatcaccagcctcttccacatacgcaactggaaccccatgtgcgctgaagaata 127033 Query: 669 tcataacct 677 |||| |||| Sbjct: 127034 tcatgacct 127042
>emb|X58369.1|RPTRFIIIA R.pipiens mRNA for transcription factor IIIA Length = 1297 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 tcaactaaaacttcatcagta 487 ||||||||||||||||||||| Sbjct: 418 tcaactaaaacttcatcagta 438
>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 187964 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ataacagcaggaagaaggcca 167 ||||||||||||||||||||| Sbjct: 97915 ataacagcaggaagaaggcca 97935
>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence Length = 119876 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 609 tgtatggatctccagcatccttaacataggtaagtggtactccatgtgcactgaagaata 668 |||||||||| ||||| || | ||||| | || ||| || |||||||| |||||||||| Sbjct: 88157 tgtatggatcaccagcctcttccacatacgcaactggaaccccatgtgcgctgaagaata 88098 Query: 669 tcataacct 677 |||| |||| Sbjct: 88097 tcatgacct 88089
>gb|AC013421.31| Homo sapiens 12 BAC RP11-714I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57062 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 13452 tcttccatctgatctctgtat 13472
>gb|AF225988.1|AF225988 Homo sapiens voltage-gated sodium channel alpha subunit (SCN8A) mRNA, complete cds Length = 7053 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 4171 tcttccatctgatctctgtat 4151
>emb|AJ310898.1|HSA310898 Homo sapiens partial mRNA for voltage-gated sodium channel Nav1.6 (SCN8A gene), cell line MCF-7 Length = 187 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 137 tcttccatctgatctctgtat 117
>emb|AJ310885.1|HSA310885 Homo sapiens partial mRNA for voltage-gated sodium channel Nav1.6 (SCN8A gene), D3 neonatal splice variant, cell line MCF-7 Length = 423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 422 tcttccatctgatctctgtat 402
>emb|AJ310884.1|HSA310884 Homo sapiens mRNA for Nav1.6 voltage-gated sodium channel (SCN8A gene) Nav1.6, D3 neonatal splice variant, cell lines MDA-MB-231 Length = 423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 422 tcttccatctgatctctgtat 402
>emb|AJ277395.1|HSA277395 Homo sapiens partial mRNA for voltage-gated sodium channel (SCN8A gene) Length = 423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 422 tcttccatctgatctctgtat 402
>emb|AJ276142.1|HSA276142 Homo sapiens partial mRNA for hNa6/Scn8a voltage-gated sodium channel (SCN8A gene), cell line LNCaP Length = 423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 422 tcttccatctgatctctgtat 402
>emb|AJ276141.1|HSA276141 Homo sapiens partial mRNA for hNa6/Scn8a voltage-gated sodium channel (SCN8A gene), cell line PC-3 Length = 423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 422 tcttccatctgatctctgtat 402
>gb|AF050731.1|HSSCN8A21 Homo sapiens voltage-gated sodium channel alpha subunit (SCN8A) gene, exon 19 Length = 305 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 239 tcttccatctgatctctgtat 219
>gb|M85211.1|RANTFIIIA Rana pipiens TFIIIA mRNA, complete cds Length = 1305 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 tcaactaaaacttcatcagta 487 ||||||||||||||||||||| Sbjct: 404 tcaactaaaacttcatcagta 424
>dbj|AB027567.1| Homo sapiens SCN8A mRNA for sodium channel, complete cds Length = 7008 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tcttccatctgatctctgtat 613 ||||||||||||||||||||| Sbjct: 4349 tcttccatctgatctctgtat 4329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,922,342 Number of Sequences: 3902068 Number of extensions: 6922342 Number of successful extensions: 112878 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112665 Number of HSP's gapped (non-prelim): 212 length of query: 733 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 710 effective length of database: 17,143,297,704 effective search space: 12171741369840 effective search space used: 12171741369840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)