>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 415      ttcagaggccaccgtagcggacgtcggagagcttggacttga 456
                ||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 28245817 ttcagaggccaccgtagcggatgtcggagaacttggacttga 28245858

>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 415   ttcagaggccaccgtagcggacgtcggagagcttggacttga 456
             ||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 43846 ttcagaggccaccgtagcggatgtcggagaacttggacttga 43887

>dbj|AK071855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115P14, full
           insert sequence
          Length = 773

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                     
Query: 415 ttcagaggccaccgtagcggacgtcggagagcttggacttga 456
           ||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 436 ttcagaggccaccgtagcggatgtcggagaacttggacttga 395

>gb|AY815843.1| Schistosoma japonicum SJCHGC07486 protein mRNA, complete cds
          Length = 580

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 66  tgatacatcttgatctgcagctt 88
           |||||||||||||||||||||||
Sbjct: 190 tgatacatcttgatctgcagctt 168

>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence
          Length = 200303

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 344    catgcatatgcacgtatatgta 365
              ||||||||||||||||||||||
Sbjct: 111370 catgcatatgcacgtatatgta 111391

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 169     gatccagcagttaaccatgcagcaac 194
               ||||||| ||||||||||||||||||
Sbjct: 2571769 gatccagtagttaaccatgcagcaac 2571744

>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 169   gatccagcagttaaccatgcagcaac 194
             ||||||| ||||||||||||||||||
Sbjct: 98325 gatccagtagttaaccatgcagcaac 98350

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 169     gatccagcagttaaccatgcagcaac 194
               ||||||| ||||||||||||||||||
Sbjct: 2571879 gatccagtagttaaccatgcagcaac 2571854

>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence
          Length = 159298

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 397   aggctgggaggaaaaagtttcagaggcca 425
             |||||||| |||||||||||| |||||||
Sbjct: 52915 aggctgggtggaaaaagtttctgaggcca 52887

>emb|AL021939.1|HS352A20 Human DNA sequence from clone RP3-352A20 on chromosome 6q24.1-25.1
            Contains a novel pseudogene and the 3' end of the ALDH8A1
            gene for aldehyde dehydrogenase 8 family, member A1,
            complete sequence
          Length = 144759

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  ggaggctgggaggaaaaagtt 415
            |||||||||||||||||||||
Sbjct: 1299 ggaggctgggaggaaaaagtt 1279

>dbj|BS000606.1| Pan troglodytes chromosome Y clone:PTBY-009G03, complete sequences
          Length = 113454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 397    aggctgggaggaaaaagtttcagaggcca 425
              |||||||| |||||||||||| |||||||
Sbjct: 109385 aggctgggtggaaaaagtttctgaggcca 109357

>dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, complete sequences
          Length = 161601

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  aggctgggaggaaaaagtttcagaggcca 425
            |||||||| |||||||||||| |||||||
Sbjct: 6394 aggctgggtggaaaaagtttctgaggcca 6366

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 397      aggctgggaggaaaaagtttcagaggcca 425
                |||||||| |||||||||||| |||||||
Sbjct: 15501489 aggctgggtggaaaaagtttctgaggcca 15501517

>gb|AC009233.3|AC009233 Homo sapiens BAC clone RP11-356K22 from Y, complete sequence
          Length = 195439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 397    aggctgggaggaaaaagtttcagaggcca 425
              |||||||| |||||||||||| |||||||
Sbjct: 112008 aggctgggtggaaaaagtttctgaggcca 111980

>emb|AL928922.7| Mouse DNA sequence from clone RP23-431J22 on chromosome 2, complete
              sequence
          Length = 203047

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 344    catgcatatgcacgtatatgt 364
              |||||||||||||||||||||
Sbjct: 110955 catgcatatgcacgtatatgt 110975

>gb|AC134440.3| Mus musculus BAC clone RP24-528L1 from chromosome 18, complete sequence
          Length = 152907

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     gaggaaaaacagagagcatggctt 66
              ||||||||||||||| ||||||||
Sbjct: 150052 gaggaaaaacagagaccatggctt 150075

>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    aaggcaaccaaaaacacata 152
              ||||||||||||||||||||
Sbjct: 205366 aaggcaaccaaaaacacata 205347

>emb|AL590065.3| Human DNA sequence from clone RP11-307A17 on chromosome X Contains a
              novel gene (MGC34831) and the 5' end of a novel gene(
              FLJ36601), complete sequence
          Length = 187386

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     tctgcagcttaaggaggata 98
              ||||||||||||||||||||
Sbjct: 108732 tctgcagcttaaggaggata 108713

>emb|AL589947.3| Human DNA sequence from clone RP11-127B16 on chromosome 6 Contaims a
             novel gene and a CpG island, complete sequence
          Length = 143715

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 53    agagagcatggcttga-tacatcttgat 79
             |||||||||||||||| |||||||||||
Sbjct: 67280 agagagcatggcttgactacatcttgat 67307

>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc
              finger protein pseudogene, complete sequence
          Length = 190351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    gaggaaaaagtttcagaggc 423
              ||||||||||||||||||||
Sbjct: 112017 gaggaaaaagtttcagaggc 112036

>gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, complete sequence
          Length = 157443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    tgcatatgcacgtatatgta 365
              ||||||||||||||||||||
Sbjct: 141967 tgcatatgcacgtatatgta 141948

>gb|AC100779.2| Homo sapiens chromosome 18, clone RP11-761D8, complete sequence
          Length = 196261

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                             
Query: 127    tcaaaaaaggcaac--caaaaacacatagac 155
              ||||||||||||||  |||||||||||||||
Sbjct: 169350 tcaaaaaaggcaacaacaaaaacacatagac 169320

>gb|AC091039.7| Homo sapiens chromosome 18, clone RP11-403A5, complete sequence
          Length = 168148

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                            
Query: 127   tcaaaaaaggcaac--caaaaacacatagac 155
             ||||||||||||||  |||||||||||||||
Sbjct: 29804 tcaaaaaaggcaacaacaaaaacacatagac 29774

>gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, complete sequence
          Length = 212092

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    gaggaaaaacagagagcatggctt 66
             ||||||||||||||| ||||||||
Sbjct: 30439 gaggaaaaacagagaccatggctt 30462

>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence
          Length = 206481

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    tcacacacacgcagcagcag 220
              ||||||||||||||||||||
Sbjct: 102554 tcacacacacgcagcagcag 102573

>dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23, map 22, complete
            sequences
          Length = 179114

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  aaggcaaccaaaaacacata 152
            ||||||||||||||||||||
Sbjct: 7126 aaggcaaccaaaaacacata 7107

>gb|AF240627.1|AF240627 Homo sapiens chromosome 21 map 21q21 clone B650K3, complete sequence
          Length = 170770

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    aaggcaaccaaaaacacata 152
              ||||||||||||||||||||
Sbjct: 107522 aaggcaaccaaaaacacata 107503

>emb|CT485605.3| RP43-010N04, complete sequence
          Length = 162117

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    tctgcagcttaaggaggata 98
             ||||||||||||||||||||
Sbjct: 87111 tctgcagcttaaggaggata 87092

>gb|BC086272.1| Xenopus laevis hypothetical LOC495683, mRNA (cDNA clone MGC:81956
            IMAGE:7010046), complete cds
          Length = 3285

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   tacatcttgatctgcagctt 88
            ||||||||||||||||||||
Sbjct: 2879 tacatcttgatctgcagctt 2898

>emb|CT485994.3| RP43-077B08, complete sequence
          Length = 140305

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     tctgcagcttaaggaggata 98
              ||||||||||||||||||||
Sbjct: 110434 tctgcagcttaaggaggata 110415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,481,643
Number of Sequences: 3902068
Number of extensions: 4481643
Number of successful extensions: 80301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 80145
Number of HSP's gapped (non-prelim): 157
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)