ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37j05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 1276 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 1217 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 1216 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 1157 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 1156 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 1097 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 1096 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 1037 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1036 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 977 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 976 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 917 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 916 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 857 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 856 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 797 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 796 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 748
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 44867 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 44808 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 44807 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 44748 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 44747 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 44688 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 44687 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 44628 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 44627 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 44568 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 44567 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 44508 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 44507 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 44448 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 44447 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 44388 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 44387 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 44339
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 22146386 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 22146327 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 22146326 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 22146267 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 22146266 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 22146207 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 22146206 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 22146147 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22146146 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 22146087 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 22146086 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 22146027 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 22146026 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 22145967 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 22145966 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 22145907 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 22145906 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 22145858
>dbj|AK064788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B21, full insert sequence Length = 1524 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 1407 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 1348 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 1347 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 1288 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 1287 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 1228 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 1227 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 1168 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1167 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 1108 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 1107 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 1048 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 1047 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 988 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 987 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 928 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 927 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 879
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 70892 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 70833 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 70832 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 70773 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 70772 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 70713 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 70712 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 70653 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 70652 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 70593 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 70592 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 70533 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 70532 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 70473 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 70472 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 70413 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 70412 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 70364
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 517 bits (261), Expect = e-143 Identities = 462/529 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 16247 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 16188 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 16187 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 16128 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 16127 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 16068 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 16067 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 16008 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 16007 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 15948 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 15947 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 15888 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 15887 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 15828 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 15827 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 15768 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||| ||||||||||| ||||||||||||| || |||||| Sbjct: 15767 cttggttaaccataatcttgcacaggagcatgtacttcaagctgaagat 15719
>ref|XM_463019.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.8 mRNA Length = 1846 Score = 502 bits (253), Expect = e-139 Identities = 460/529 (86%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 1563 aagccatgatcttggcagacctcatgtaaagactgtcaacgaccttcccaacattcgaaa 1504 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 1503 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 1444 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||| ||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 1443 agccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 1384 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 1383 tcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccaccc 1324 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 1323 ttgcgtacggctcaatcagcctgcacaggttctgctccaggagggcatcatacagagatg 1264 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| |||||||||||||| | |||||| |||| ||| |||| Sbjct: 1263 aaagatgcctgtgcacaatagggtcctcctccagctgagacttgtaatcacgaagggcag 1204 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 1203 tttcaaagtacttgagagatctttttgagtaggcatcagctacagctttcatagcatcaa 1144 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 1143 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 1084 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 1083 cttggttaaccattatcttgcacaggagcatgtacttcaagctgaagat 1035
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 502 bits (253), Expect = e-139 Identities = 460/529 (86%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 20887970 aagccatgatcttggcagacctcatgtaaagactgtcaacgaccttcccaacattcgaaa 20887911 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 20887910 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 20887851 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||| ||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 20887850 agccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 20887791 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 20887790 tcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccaccc 20887731 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 20887730 ttgcgtacggctcaatcagcctgcacaggttctgctccaggagggcatcatacagagatg 20887671 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| |||||||||||||| | |||||| |||| ||| |||| Sbjct: 20887670 aaagatgcctgtgcacaatagggtcctcctccagctgagacttgtaatcacgaagggcag 20887611 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 20887610 tttcaaagtacttgagagatctttttgagtaggcatcagctacagctttcatagcatcaa 20887551 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 20887550 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 20887491 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 20887490 cttggttaaccattatcttgcacaggagcatgtacttcaagctgaagat 20887442
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 502 bits (253), Expect = e-139 Identities = 460/529 (86%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 20880999 aagccatgatcttggcagacctcatgtaaagactgtcaacgaccttcccaacattcgaaa 20880940 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 20880939 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 20880880 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||| ||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 20880879 agccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 20880820 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 20880819 tcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccaccc 20880760 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 20880759 ttgcgtacggctcaatcagcctgcacaggttctgctccaggagggcatcatacagagatg 20880700 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| |||||||||||||| | |||||| |||| ||| |||| Sbjct: 20880699 aaagatgcctgtgcacaatagggtcctcctccagctgagacttgtaatcacgaagggcag 20880640 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 20880639 tttcaaagtacttgagagatctttttgagtaggcatcagctacagctttcatagcatcaa 20880580 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 20880579 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 20880520 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 20880519 cttggttaaccattatcttgcacaggagcatgtacttcaagctgaagat 20880471
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 502 bits (253), Expect = e-139 Identities = 460/529 (86%) Strand = Plus / Plus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 34542 aagccatgatcttggcagacctcatgtaaagactgtcaacgaccttcccaacattcgaaa 34601 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 34602 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 34661 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||| ||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 34662 agccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 34721 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 34722 tcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccaccc 34781 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 34782 ttgcgtacggctcaatcagcctgcacaggttctgctccaggagggcatcatacagagatg 34841 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| |||||||||||||| | |||||| |||| ||| |||| Sbjct: 34842 aaagatgcctgtgcacaatagggtcctcctccagctgagacttgtaatcacgaagggcag 34901 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 34902 tttcaaagtacttgagagatctttttgagtaggcatcagctacagctttcatagcatcaa 34961 Query: 596 catcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatcag 655 |||||||||| | |||||||| || ||||| || ||||||| |||||| |||||||||| Sbjct: 34962 catcaggacccagatacttcaaaccagccttagatgagattattcctgcgacatcatcag 35021 Query: 656 cttggttaaccattatcttgcacagaagcatgtacttcaggcagaagat 704 ||||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 35022 cttggttaaccattatcttgcacaggagcatgtacttcaagctgaagat 35070
>gb|AY104783.1| Zea mays PCO142662 mRNA sequence Length = 1868 Score = 452 bits (228), Expect = e-124 Identities = 450/524 (85%) Strand = Plus / Minus Query: 174 tcaagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcga 233 |||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1624 tcaagccatgatcttggccgacctcacataaaggctgtccacaaccttcccgacattcga 1565 Query: 234 aattgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgag 293 ||| ||||| || || ||||||||||| |||| ||||| | || || || || ||||| Sbjct: 1564 aatggtttcgagagtggcagggaagatttcctcggtcttagaatcctcaaagataatgag 1505 Query: 294 gcagcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacag 353 |||||| || || ||||| || ||||| || ||||||||||| ||||||||||| ||||| Sbjct: 1504 gcagccagcaccttgatctagtgtcccagcaaatttcttgtcaaggatcatctgcgacag 1445 Query: 354 cttcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccac 413 ||||||||| ||||| || || ||||| || |||||||| |||| |||||||||||||| Sbjct: 1444 cttcttctcaacatggtcaatcggcaattcaatcatctccgctatatgtgcaatctccac 1385 Query: 414 ccttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagaga 473 ||||||||||| ||||||| |||||| || ||||||||||| || |||||||||||||| Sbjct: 1384 ccttgagtagggctcaatcaacctgcagagattctgctccagcagtgtatcatacagaga 1325 Query: 474 cgagaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagc 533 || || ||||||||||||||||| |||||||||||||||| ||| || |||| ||| || Sbjct: 1324 agaaagatgcctgtggacaatagggtcctcctccagctgggacttataatcacgaagggc 1265 Query: 534 agtttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatc 593 ||||||||| ||||| ||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct: 1264 agtttcaaaatacttgagagatcttttagagtatgcatcagcaacagccttcatagcatc 1205 Query: 594 cacatcaggaccaacatacttcaggcctgccttggacgagattactcctgcaacatcatc 653 ||||||||||| | ||| || ||||| ||||| |||||||||| |||||||||||| || Sbjct: 1204 aacatcaggacccagatattttaggccagccttagacgagattattcctgcaacatcgtc 1145 Query: 654 agcttggttaaccattatcttgcacagaagcatgtacttcaggc 697 ||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1144 agcttggttaaccattatcttacacaagagcatgtacttcaggc 1101
>dbj|AK061617.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C10, full insert sequence Length = 540 Score = 410 bits (207), Expect = e-111 Identities = 369/423 (87%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 423 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 364 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 363 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 304 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 303 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 244 Query: 356 tcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctccaccc 415 ||||||| ||||| || | ||||||||| |||||||| || | |||||||||||||||| Sbjct: 243 tcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccaccc 184 Query: 416 ttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagagacg 475 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 183 ttgagtagggctcaatcagcctgcacaggttctgctccaggagggtatcatacagagatg 124 Query: 476 agaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagagcag 535 | || |||||||| |||||||| ||||||||||| || | |||||| |||| ||| |||| Sbjct: 123 aaagatgcctgtgcacaatagggtcctcctccagttgagacttgtaatcacgaagggcag 64 Query: 536 tttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcatcca 595 ||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||| | Sbjct: 63 tttcaaagtacttgagagatctttttgagtaggcatcagcaacagctttcatagcatcaa 4 Query: 596 cat 598 ||| Sbjct: 3 cat 1
>dbj|AB070260.1| Oryza sativa (japonica cultivar-group) OsRPN6 mRNA for 26S proteasome regulatory particle non-ATPase subunit6, partial cds Length = 385 Score = 161 bits (81), Expect = 4e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 176 aagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcgaaa 235 |||||||||||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 181 aagccatgatcttggcagacctcatgtaaagactgtcgacgaccttcccaacatttgaaa 122 Query: 236 ttgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgaggc 295 | ||||| || |||||||||||||| ||||| ||||||| || || || || ||||||| Sbjct: 121 tagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgaggc 62 Query: 296 agcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgacagct 355 |||| || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 61 agccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagct 2 Query: 356 t 356 | Sbjct: 1 t 1
>ref|NM_102656.2| Arabidopsis thaliana ATS9 (19S PROTEOSOME SUBUNIT 9) AT1G29150 (ATS9) mRNA, complete cds Length = 1569 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1263 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1204 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1203 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1144 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1143 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1084 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1083 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 1024 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 1023 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 964 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 963 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 904 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 903 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 845
>gb|AY230837.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA, RPN6a-4 allele, partial cds Length = 1333 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1098 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1039 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1038 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 979 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 978 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 919 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 918 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 859 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 858 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 799 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 798 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 739 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 738 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 680
>gb|AY230836.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA, RPN6a-3 allele, complete cds Length = 1530 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1255 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1196 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1195 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1136 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1135 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1076 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1075 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 1016 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 1015 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 956 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 955 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 896 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 895 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 837
>gb|AY230835.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA, RPN6a-2 allele, complete cds Length = 1522 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1220 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1161 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1160 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1101 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1100 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1041 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1040 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 981 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 980 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 921 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 920 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 861 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 860 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 802
>gb|AY230834.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA, RPN6a-1 allele, complete cds Length = 1502 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1226 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1167 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1166 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1107 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1106 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1047 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1046 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 987 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 986 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 927 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 926 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 867 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 866 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 808
>gb|AY056311.1| Arabidopsis thaliana putative 19S proteosome subunit 9 (At1g29150) mRNA, complete cds Length = 1291 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1158 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1099 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1098 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1039 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1038 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 979 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 978 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 919 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 918 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 859 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 858 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 799 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 798 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 740
>gb|AF370203.1| Arabidopsis thaliana putative 19S proteosome subunit 9 (At1g29150) mRNA, complete cds Length = 1537 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1261 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1202 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1201 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1142 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1141 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1082 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1081 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 1022 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 1021 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 962 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 961 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 902 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 901 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 843
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Plus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 80993 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 81052 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 81053 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 81112 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 81113 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 81172 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 81173 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 81232 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 |||||||||| || || | ||||| |||||| || | |||||||| ||||| || Sbjct: 81233 tttgtagtcacggagtgcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 81292 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 81293 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 81352 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 81353 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 81411
>emb|BX815665.1|CNS0ABJI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS81ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1405 Score = 145 bits (73), Expect = 2e-31 Identities = 335/420 (79%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1232 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1173 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1172 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1113 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1112 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1053 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1052 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 993 Query: 516 cttgtagtcaccaagagcagtt-tcaaagtacttcagagatcgcttcgagtaggcatcgg 574 |||||||||| ||| ||| ||||| |||||| || | |||||||| ||||| | Sbjct: 992 tttgtagtcacg--gagtcgttctcaaacaacttcaaggacctcttcgagtgagcatcag 935 Query: 575 ccacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgaga 634 | || |||||||| ||||||| ||||| ||||| |||| || || ||||| || |||| Sbjct: 934 cgactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggaga 875 Query: 635 ttactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 ||| |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 874 ttattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 815
>gb|AY089157.1| Arabidopsis thaliana clone 39755 mRNA, complete sequence Length = 1521 Score = 141 bits (71), Expect = 4e-30 Identities = 333/419 (79%), Gaps = 1/419 (0%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1261 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1202 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1201 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1142 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1141 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1082 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1081 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 1022 Query: 516 cttgtagtcaccaagagcagtttcaaagtacttcagagatcgcttcgagtaggcatcggc 575 ||||||| | | |||| | ||||| |||||| || | |||||||| ||||| || Sbjct: 1021 tttgtagtgagga-gagcgttctcaaacaacttcaaggacctcttcgagtgagcatcagc 963 Query: 576 cacagctttcatagcatccacatcaggaccaacatacttcaggcctgccttggacgagat 635 || |||||||| ||||||| ||||| ||||| |||| || || ||||| || ||||| Sbjct: 962 gactgctttcatggcatccaggtcagggccaacgtactgtagtccagcctttgaggagat 903 Query: 636 tactcctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttca 694 || |||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| Sbjct: 902 tattcctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttca 844
>emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 on chromosome 3, complete sequence Length = 115223 Score = 93.7 bits (47), Expect = 7e-16 Identities = 341/439 (77%) Strand = Plus / Plus Query: 173 ctcaagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcg 232 |||| |||||||||||||| ||||| | ||||| || || || || ||||| ||||| | Sbjct: 14745 ctcatgccatgatcttggcagacctaacataaagactgtcaaccactttcccaacattgg 14804 Query: 233 aaattgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatga 292 |||| || || | || |||||| | || || || ||||||| || |||||||| | || Sbjct: 14805 aaatggtctctaaagttgcagggtatattgcatcagtcttgggatcatcgaatataacga 14864 Query: 293 ggcagcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgaca 352 |||| || || || ||||||| || || || || |||||||||| |||||||| |||| Sbjct: 14865 ggcatccggcaccttgatccaatgttccagcaaacttcttgtccaaaatcatctgagaca 14924 Query: 353 gcttcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctcca 412 |||| ||| || || || ||||| | |||||| | ||| || | ||||||||||| | Sbjct: 14925 tcttccgctcaacgtgatcaattggaagctcgataagctcagcaatatgtgcaatctcaa 14984 Query: 413 cccttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagag 472 | |||||| | | ||||||| ||| || || ||||||||||| |||||||||||||| | Sbjct: 14985 ctcttgagaatggctcaatcaacctacaaagattctgctccagaagggtatcatacaggg 15044 Query: 473 acgagaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagag 532 | || | ||| ||||| ||||| || || ||| ||| ||| ||||||||||| | || Sbjct: 15045 atgaaatgtgtctgtgaacaattgggtcttcccccaactgtgccttgtagtcctgcaaag 15104 Query: 533 cagtttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcat 592 ||||||| || |||| || |||||||| || || ||||| || ||||||||||| |||| Sbjct: 15105 cagtttcgaaaaacttaagggatcgcttagaataagcatcagcaacagctttcatcgcat 15164 Query: 593 ccacatcaggaccaacata 611 ||| ||||| |||||||| Sbjct: 15165 ccaagtcaggcccaacata 15183
>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence Length = 92216 Score = 93.7 bits (47), Expect = 7e-16 Identities = 341/439 (77%) Strand = Plus / Plus Query: 173 ctcaagccatgatcttggccgacctcatgtaaaggctctcgacaaccttccctacattcg 232 |||| |||||||||||||| ||||| | ||||| || || || || ||||| ||||| | Sbjct: 91386 ctcatgccatgatcttggcagacctaacataaagactgtcaaccactttcccaacattgg 91445 Query: 233 aaattgtttccagcgtagcagggaagatcgcctccgtcttggcgtcttcgaatatgatga 292 |||| || || | || |||||| | || || || ||||||| || |||||||| | || Sbjct: 91446 aaatggtctctaaagttgcagggtatattgcatcagtcttgggatcatcgaatataacga 91505 Query: 293 ggcagcccgcgccctgatccagagtccctgcgaatttcttgtccaggatcatctgtgaca 352 |||| || || || ||||||| || || || || |||||||||| |||||||| |||| Sbjct: 91506 ggcatccggcaccttgatccaatgttccagcaaacttcttgtccaaaatcatctgagaca 91565 Query: 353 gcttcttctccacatgctcgattggcaactcgatcatctctgctacgtgtgcaatctcca 412 |||| ||| || || || ||||| | |||||| | ||| || | ||||||||||| | Sbjct: 91566 tcttccgctcaacgtgatcaattggaagctcgataagctcagcaatatgtgcaatctcaa 91625 Query: 413 cccttgagtaggcttcaatcagcctgcacaggttctgctccaggagggtatcatacagag 472 | |||||| | | ||||||| ||| || || ||||||||||| |||||||||||||| | Sbjct: 91626 ctcttgagaatggctcaatcaacctacaaagattctgctccagaagggtatcatacaggg 91685 Query: 473 acgagaggtgcctgtggacaataggatcctcctccagctgggccttgtagtcaccaagag 532 | || | ||| ||||| ||||| || || ||| ||| ||| ||||||||||| | || Sbjct: 91686 atgaaatgtgtctgtgaacaattgggtcttcccccaactgtgccttgtagtcctgcaaag 91745 Query: 533 cagtttcaaagtacttcagagatcgcttcgagtaggcatcggccacagctttcatagcat 592 ||||||| || |||| || |||||||| || || ||||| || ||||||||||| |||| Sbjct: 91746 cagtttcgaaaaacttaagggatcgcttagaataagcatcagcaacagctttcatcgcat 91805 Query: 593 ccacatcaggaccaacata 611 ||| ||||| |||||||| Sbjct: 91806 ccaagtcaggcccaacata 91824
>gb|AF083890.1|AF083890 Arabidopsis thaliana 19S proteosome subunit 9 mRNA, complete cds Length = 1527 Score = 85.7 bits (43), Expect = 2e-13 Identities = 199/251 (79%) Strand = Plus / Minus Query: 276 gtcttcgaatatgatgaggcagcccgcgccctgatccagagtccctgcgaatttcttgtc 335 ||||||||| ||||||||||| || || || ||||||| || ||||| ||||||||||| Sbjct: 1268 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1209 Query: 336 caggatcatctgtgacagcttcttctccacatgctcgattggcaactcgatcatctctgc 395 || |||||||| || |||||||| |||||||| |||| ||||| | || | ||| || Sbjct: 1208 gagtatcatctgagatagcttcttttccacatggtcgagcggcaatccaatgagctcagc 1149 Query: 396 tacgtgtgcaatctccacccttgagtaggcttcaatcagcctgcacaggttctgctccag 455 | ||| || ||||| || |||||| ||| || |||| | ||||| || |||||||| Sbjct: 1148 aatgtgagctatctcaactcttgagaagggctcgatcaaacgacacagattttgctccag 1089 Query: 456 gagggtatcatacagagacgagaggtgcctgtggacaataggatcctcctccagctgggc 515 || || ||||| ||||| ||||| |||||||||||||| || || || || ||||| || Sbjct: 1088 aagcgtgtcatagagagaagagagatgcctgtggacaattgggtcatcttcaagctgtgc 1029 Query: 516 cttgtagtcac 526 |||||||||| Sbjct: 1028 tttgtagtcac 1018 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 640 cctgcaacatcatcagcttggttaaccattatcttgcacagaagcatgtacttcag 695 ||||||||||||||||||||| ||||||| ||||||||||| | |||||||||||| Sbjct: 907 cctgcaacatcatcagcttggctaaccatgatcttgcacagtaacatgtacttcag 852
>emb|BX012998.1|CNS08I6Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 285 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Plus Query: 328 ttcttgtccaggatcatctgtgacagcttcttctc 362 ||||||||||||||||||||||||||||||||||| Sbjct: 220 ttcttgtccaggatcatctgtgacagcttcttctc 254
>ref|XM_321691.2| Anopheles gambiae str. PEST ENSANGP00000015227 (ENSANGG00000012738), mRNA Length = 2136 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 328 ttcttgtccaggatcatctgtgacagcttcttctc 362 ||||||||||||||||||||||||||||||||||| Sbjct: 1374 ttcttgtccaggatcatctgtgacagcttcttctc 1340
>gb|AY440999.1| Armigeres subalbatus ASAP ID: 40603 19S proteasome regulatory particle, lid subcomplex p44.5 subunit mRNA sequence Length = 726 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 ttcttgtccaggatcatctgtgacagcttcttctc 362 |||||||||||||||||||| ||||| |||||||| Sbjct: 250 ttcttgtccaggatcatctgcgacagtttcttctc 216
>ref|NM_166065.1| Drosophila melanogaster Proteasome p44.5 subunit CG10149-RA, transcript variant A (Rpn6), mRNA Length = 1729 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 1240 ttgtccaggatcatttgggacagcttcttttccac 1206
>ref|NM_058126.3| Drosophila melanogaster Proteasome p44.5 subunit CG10149-RB, transcript variant B (Rpn6), mRNA Length = 1889 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 1400 ttgtccaggatcatttgggacagcttcttttccac 1366
>gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR07P02, complete sequence Length = 160920 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 149576 ttgtccaggatcatttgggacagcttcttttccac 149610
>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone BACR03K23, complete sequence Length = 160346 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 27245 ttgtccaggatcatttgggacagcttcttttccac 27279
>gb|AF145309.1|AF145309 Drosophila melanogaster 26S proteasome regulatory complex subunit p42B mRNA, complete cds Length = 1269 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 1115 ttgtccaggatcatttgggacagcttcttttccac 1081
>gb|AF160939.1|AF160939 Drosophila melanogaster clone LD18931 BcDNA.LD18931 (BcDNA.LD18931) mRNA, complete cds Length = 1816 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 1323 ttgtccaggatcatttgggacagcttcttttccac 1289
>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete sequence Length = 266851 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 331 ttgtccaggatcatctgtgacagcttcttctccac 365 |||||||||||||| || ||||||||||| ||||| Sbjct: 119588 ttgtccaggatcatttgggacagcttcttttccac 119622
>emb|AL035705.22|HS758N20 Human DNA sequence from clone RP4-758N20 on chromosome 1p31.3-32.2 Contains the 3' end of the PRKAA2 gene for protein kinase AMP-activated alpha 2 catalytic subunit, the 3' end of a novel gene, complete sequence Length = 129618 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 681 aagcatgtacttcaggcagaag 702 |||||||||||||||||||||| Sbjct: 35216 aagcatgtacttcaggcagaag 35237
>gb|DQ217037.1| Taeniopygia guttata clone 0061P0008G04 proteasome 26S non-ATPase subunit 11 variant 1-like mRNA, complete sequence Length = 1549 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 ttcttgtccaggatcatctgtgaca 352 |||||||||| |||||||||||||| Sbjct: 1117 ttcttgtccaagatcatctgtgaca 1093
>gb|AE006402.1| Lactococcus lactis subsp. lactis IL1403 section 164 of 218 of the complete genome Length = 10914 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 acagctttcatagcatccaca 597 ||||||||||||||||||||| Sbjct: 3915 acagctttcatagcatccaca 3935
>ref|XM_656737.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4225.2), mRNA Length = 2778 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 cttgtccaggatcatctgtgacagcttcttctccacatgct 370 ||||||||||||||| ||||| ||||| ||||||| |||| Sbjct: 1119 cttgtccaggatcatttgtgagagctttctctccacctgct 1079
>ref|XM_745286.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit RpnF (Afu1g06300) partial mRNA Length = 1416 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 334 tccaggatcatctgtgacagcttcttctccacatgct 370 |||||||||||||| || |||||| ||||||| |||| Sbjct: 1256 tccaggatcatctgagaaagcttcctctccacctgct 1220
>emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490O24 on chromosome 10 Contains a 60S ribosomal protein L23 (RPL23) pseudogene and a novel gene, complete sequence Length = 168778 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 ctggagaacaaaacatctcct 174 ||||||||||||||||||||| Sbjct: 135374 ctggagaacaaaacatctcct 135394
>gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, complete sequence Length = 209618 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 gcatccacatcaggaccaac 608 |||||||||||||||||||| Sbjct: 200570 gcatccacatcaggaccaac 200551
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 586 atagcatccacatcaggaccaaca 609 |||||| ||||||||||||||||| Sbjct: 48181 atagcaaccacatcaggaccaaca 48204
>gb|AC099628.7| Mus musculus chromosome 1, clone RP24-82L18, complete sequence Length = 171875 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 146850 aaggaagaaataatggcaac 146869
>ref|XM_360668.1| Magnaporthe grisea 70-15 hypothetical protein (MG03211.4) partial mRNA Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cttgtccaggatcatctgtgacag 353 ||||||||| |||||||||||||| Sbjct: 1116 cttgtccagaatcatctgtgacag 1093
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 caggatcatctgtgacagcttctt 359 ||||||||||||||||||| |||| Sbjct: 522099 caggatcatctgtgacagcctctt 522122
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 caggatcatctgtgacagcttctt 359 ||||||||||||||||||| |||| Sbjct: 507601 caggatcatctgtgacagcctctt 507624
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 caggatcatctgtgacagcttctt 359 ||||||||||||||||||| |||| Sbjct: 504716 caggatcatctgtgacagcctctt 504739
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 caggatcatctgtgacagcttctt 359 ||||||||||||||||||| |||| Sbjct: 505689 caggatcatctgtgacagcctctt 505712
>gb|AC117648.14| Mus musculus, clone RP23-254P23, complete sequence Length = 228273 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ttcttgtcctgtgctagacatttt 54 ||||||| |||||||||||||||| Sbjct: 64110 ttcttgttctgtgctagacatttt 64133
>gb|AC101830.7| Mus musculus chromosome 1, clone RP24-480B20, complete sequence Length = 158825 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 37546 aaggaagaaataatggcaac 37565
>gb|AC146214.2| Pan troglodytes BAC clone CH251-295K11 from Y, complete sequence Length = 172148 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tgtttccagcgtagcagggaagat 260 ||||||||| |||||||||||||| Sbjct: 48241 tgtttccagtgtagcagggaagat 48218
>gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complete sequence Length = 104955 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 tgtaagatttaactggagaacaaa 165 |||||||||||||||||| ||||| Sbjct: 24171 tgtaagatttaactggagcacaaa 24148
>gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, complete sequence Length = 204781 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ttcttgtcctgtgctagacatttt 54 ||||||| |||||||||||||||| Sbjct: 181676 ttcttgttctgtgctagacatttt 181699
>emb|BX293997.14| Zebrafish DNA sequence from clone DKEY-15L7 in linkage group 6, complete sequence Length = 233655 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agcagtttcaaagtacttca 550 |||||||||||||||||||| Sbjct: 223242 agcagtttcaaagtacttca 223261
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 caggatcatctgtgacagcttctt 359 ||||||||||||||||||| |||| Sbjct: 505225 caggatcatctgtgacagcctctt 505248
>emb|AL713965.10| Human DNA sequence from clone RP4-681L3 on chromosome 1 Contains the SLC26A9 gene for solute carrier family 26 member 9, complete sequence Length = 88823 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 35797 atcatctgtgacagcttctt 35778
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 994067 aaggaagaaataatggcaac 994048
>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3 Contains part of the POU2F1 gene for POU domain class 2 transcription factor 1, complete sequence Length = 169627 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 68488 atcatctgtgacagcttctt 68507
>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1 Contains a zinc finger protein 208 (ZNF208) pseudogene, complete sequence Length = 103367 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 ctttcatagcatccacatca 600 |||||||||||||||||||| Sbjct: 75149 ctttcatagcatccacatca 75168
>emb|AL031780.1|HS470K1 Human DNA sequence from clone RP3-470K1 on chromosome 6p22.1-23, complete sequence Length = 103613 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tgcaaggaagaaataatggcaaca 100 ||||||||||||||||||| |||| Sbjct: 98563 tgcaaggaagaaataatggaaaca 98540
>emb|AJ237695.1|ECO237695 Escherichia coli ssuE gene, ssuA gene, ssuD gene, ssuC gene and ssuB gene, strain K12 Length = 4490 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 2877 aaggaagaaataatggcaac 2896
>gb|AC109211.10| Mus musculus chromosome 8, clone RP23-27N18, complete sequence Length = 212670 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 gcatccacatcaggaccaac 608 |||||||||||||||||||| Sbjct: 400 gcatccacatcaggaccaac 381
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence Length = 183307 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aatttgcaaggaagaaataa 92 |||||||||||||||||||| Sbjct: 172682 aatttgcaaggaagaaataa 172663
>dbj|BS000626.2| Pan troglodytes chromosome Y clone: PTB-081L20, complete sequence Length = 185894 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tgtttccagcgtagcagggaagat 260 ||||||||| |||||||||||||| Sbjct: 57525 tgtttccagtgtagcagggaagat 57548
>dbj|BS000531.1| Pan troglodytes chromosome Y clone:PTB-018L03, complete sequences Length = 161297 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tgtttccagcgtagcagggaagat 260 ||||||||| |||||||||||||| Sbjct: 151820 tgtttccagtgtagcagggaagat 151843
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 995266 aaggaagaaataatggcaac 995247
>gb|U40029.1| Caenorhabditis elegans cosmid F10G7, complete sequence Length = 43675 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ttggcaactcgatcatctct 393 |||||||||||||||||||| Sbjct: 14989 ttggcaactcgatcatctct 15008
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tgtttccagcgtagcagggaagat 260 ||||||||| |||||||||||||| Sbjct: 19832854 tgtttccagtgtagcagggaagat 19832831
>dbj|AK096315.1| Homo sapiens cDNA FLJ38996 fis, clone NT2RI2020390 Length = 2242 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 833 atcatctgtgacagcttctt 814
>dbj|AK055746.1| Homo sapiens cDNA FLJ31184 fis, clone KIDNE2000328 Length = 2594 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 1185 atcatctgtgacagcttctt 1166
>dbj|AB225611.1| Aspergillus oryzae cDNA, contig sequence: AoEST2466 Length = 1491 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 tccaggatcatctgtgacagcttc 357 |||||||||||||| ||||||||| Sbjct: 1256 tccaggatcatctgcgacagcttc 1233
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 tccaggatcatctgtgacagcttc 357 |||||||||||||| ||||||||| Sbjct: 1055114 tccaggatcatctgcgacagcttc 1055137
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tttaactggagaacaaaaca 168 |||||||||||||||||||| Sbjct: 3011 tttaactggagaacaaaaca 3030
>gb|AC083851.5| Homo sapiens BAC clone RP11-650N7 from 4, complete sequence Length = 123907 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ttgtcctgtgctagacattttata 57 ||||| |||||||||||||||||| Sbjct: 117851 ttgtcatgtgctagacattttata 117828
>gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, complete sequence Length = 193665 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tctccacccttgagtaggct 426 |||||||||||||||||||| Sbjct: 83809 tctccacccttgagtaggct 83828
>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence Length = 175492 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 31174 atcatctgtgacagcttctt 31155
>gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, complete sequence Length = 185347 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 680 gaagcatgtacttcaggcagaaga 703 |||| ||||||||||||||||||| Sbjct: 134485 gaagaatgtacttcaggcagaaga 134508
>dbj|AK052449.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430025K11 product:recombining binding protein suppressor of hairless-like (Drosophila), full insert sequence Length = 4910 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 gacaataggatcctcctcca 508 |||||||||||||||||||| Sbjct: 2966 gacaataggatcctcctcca 2985
>ref|NM_062435.3| Caenorhabditis elegans yeast SCC (mitotic condensin subunit) homolog family member (scc-1) (scc-1) mRNA, complete cds Length = 2131 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ttggcaactcgatcatctct 393 |||||||||||||||||||| Sbjct: 510 ttggcaactcgatcatctct 529
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 atttaactggagaacaaaac 167 |||||||||||||||||||| Sbjct: 25848324 atttaactggagaacaaaac 25848305
>gb|AC138472.3| Homo sapiens chromosome 19 clone CTC-419E6, complete sequence Length = 126238 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 7957 atcatctgtgacagcttctt 7938
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gatcatctgtgacagcttct 358 |||||||||||||||||||| Sbjct: 36969245 gatcatctgtgacagcttct 36969226
>gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, complete sequence Length = 161500 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 100914 atcatctgtgacagcttctt 100933
>gb|AC006382.3|AC006382 Homo sapiens clone RP11-494J4, complete sequence Length = 162810 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tgtttccagcgtagcagggaagat 260 ||||||||| |||||||||||||| Sbjct: 49039 tgtttccagtgtagcagggaagat 49062
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tttaactggagaacaaaaca 168 |||||||||||||||||||| Sbjct: 155580 tttaactggagaacaaaaca 155561
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gatcatctgtgacagcttct 358 |||||||||||||||||||| Sbjct: 59549 gatcatctgtgacagcttct 59530
>gb|AC073898.1|AC073898 Homo sapiens chromosome 19 BAC BC311202 (CIT-HSPC_419E6), complete sequence Length = 125428 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 117472 atcatctgtgacagcttctt 117491
>gb|AC068948.1|AC068948 Homo sapiens chromosome 19, cosmid R28371 (LLNL-R_244D7), complete sequence Length = 35922 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atcatctgtgacagcttctt 359 |||||||||||||||||||| Sbjct: 1046 atcatctgtgacagcttctt 1065
>dbj|AK111980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C08, full insert sequence Length = 1461 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 caggttctgctccaggagggtatc 464 |||||||||| ||||||||||||| Sbjct: 663 caggttctgcgccaggagggtatc 686
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tttaactggagaacaaaaca 168 |||||||||||||||||||| Sbjct: 3011 tttaactggagaacaaaaca 3030
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 atttaactggagaacaaaac 167 |||||||||||||||||||| Sbjct: 25776500 atttaactggagaacaaaac 25776481
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 atttaactggagaacaaaac 167 |||||||||||||||||||| Sbjct: 69775 atttaactggagaacaaaac 69756
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 atagcatccacatcaggaccaaca 609 |||||| ||||||||||||||||| Sbjct: 6268 atagcaaccacatcaggaccaaca 6245
>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence Length = 198160 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 agcatccacatcaggaccaa 607 |||||||||||||||||||| Sbjct: 163255 agcatccacatcaggaccaa 163274 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 agcatccacatcaggaccaa 607 |||||||||||||||||||| Sbjct: 163119 agcatccacatcaggaccaa 163138
>emb|CT032580.1| Platynereis dumerilii EST IB0AAA35DG03FM1 Length = 804 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 gaatttcttgtccaggatcatctgtgacagcttcttctccacat 367 |||||||||||| || |||||||| || || ||||| ||||||| Sbjct: 257 gaatttcttgtcaagaatcatctgagaaagtttcttttccacat 300
>emb|CT032423.1| Platynereis dumerilii EST IB0AAA38CC12FM1 Length = 863 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 gaatttcttgtccaggatcatctgtgacagcttcttctccacat 367 |||||||||||| || |||||||| || || ||||| ||||||| Sbjct: 276 gaatttcttgtcaagaatcatctgagaaagtttcttttccacat 319
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tttaactggagaacaaaaca 168 |||||||||||||||||||| Sbjct: 18900 tttaactggagaacaaaaca 18881
>emb|AL590429.9| Mouse DNA sequence from clone RP23-462O16 on chromosome 2, complete sequence Length = 190669 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 gacaataggatcctcctcca 508 |||||||||||||||||||| Sbjct: 151138 gacaataggatcctcctcca 151157
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaggaagaaataatggcaac 99 |||||||||||||||||||| Sbjct: 2212996 aaggaagaaataatggcaac 2212977
>emb|AL928615.3| Mouse DNA sequence from clone RP23-156E1 on chromosome 2, complete sequence Length = 118543 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tatagagctaacagaagaca 73 |||||||||||||||||||| Sbjct: 48069 tatagagctaacagaagaca 48050 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,894,872 Number of Sequences: 3902068 Number of extensions: 5894872 Number of successful extensions: 119633 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119153 Number of HSP's gapped (non-prelim): 475 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
