| Clone Name | rbags37i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UROM_CANFA (Q862Z3) Uromodulin precursor (Tamm-Horsfall urinary ... | 32 | 2.1 | 2 | YLXF_BACSU (P23454) FlaA locus 22.9 kDa protein (ORF 6) | 30 | 6.1 |
|---|
>UROM_CANFA (Q862Z3) Uromodulin precursor (Tamm-Horsfall urinary glycoprotein)| (THP) Length = 642 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 353 LGSCEGCALPEACHQ*SNRTSLCLSYHFDCTDLFIHVNNLQCK 225 LG+CE C++ E C S F+ TDLF+ ++ L+C+ Sbjct: 296 LGTCEECSVEEDCKSHDGMWSCQCKQDFNVTDLFL-LDRLECR 337
>YLXF_BACSU (P23454) FlaA locus 22.9 kDa protein (ORF 6)| Length = 213 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +2 Query: 314 DRLPEE-RILHKTPDNQKRTKQDHPPRINDANECSSNTEVAS 436 DRL ++ R L KT ++QK++ +DH D+ S N +V S Sbjct: 105 DRLNQKIRSLEKTAEDQKKSSEDHTEGSADSKASSENDKVIS 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,005,001 Number of Sequences: 219361 Number of extensions: 1719452 Number of successful extensions: 4312 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4312 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)