ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37i12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ49_ARATH (Q9FH28) Chaperone protein dnaJ 49 (AtJ49) (AtDjC49) 66 1e-10
2DNJBC_HUMAN (Q9NXW2) DnaJ homolog subfamily B member 12 41 0.004
3MALQ_CHLCV (O34022) 4-alpha-glucanotransferase (EC 2.4.1.25) (Am... 36 0.098
4COS12_YEAST (P53053) Protein COS12 31 3.1
5MALQ_CHLPN (Q9Z8L2) 4-alpha-glucanotransferase (EC 2.4.1.25) (Am... 31 3.1
6DCD_SULSO (Q980T7) Probable deoxycytidine triphosphate deaminase... 31 4.1
7GLTP_ECOLI (P21345) Proton glutamate symport protein (Glutamate-... 30 9.1
8GR97A_DROME (Q8IMQ6) Putative gustatory receptor 97a 30 9.1

>DNJ49_ARATH (Q9FH28) Chaperone protein dnaJ 49 (AtJ49) (AtDjC49)|
          Length = 354

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = -2

Query: 567 SEPVYSLSRSYPYEHKFQTQRG-VTYYVKLPN-FEDQYPHQSTERTTLERHVERDYYSII 394
           SEP YSL ++  Y+    TQ   +++YV+  + F++++P  S+ R  LE +V ++Y   +
Sbjct: 258 SEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAFDEKFPLSSSARANLEGNVIKEYKHFL 317

Query: 393 TQNCRVELQRRQWGLAYQTPHCDMLQ 316
            Q+CR+ELQ+R+W     TPHC  LQ
Sbjct: 318 FQSCRIELQKRRWNKKIPTPHCIELQ 343



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>DNJBC_HUMAN (Q9NXW2) DnaJ homolog subfamily B member 12|
          Length = 375

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
 Frame = -2

Query: 567 SEPVYSLSR--SYPYEHKFQTQR-GVTYYVKLPNFEDQYPHQSTERTTLERHVERDYYSI 397
           S P YSLS   S  + H+  T   GV YYV    F ++Y   S +  T+ER+VE DY + 
Sbjct: 268 SSPPYSLSPRPSVGHIHRRVTDHLGVVYYVG-DTFSEEYTGSSLK--TVERNVEDDYIAN 324

Query: 396 ITQNCRVELQRRQWGLAYQ-----------------TPHCDMLQKFEAT 301
           +  NC  E Q+++ GL Y+                 TP C  L + +A+
Sbjct: 325 LRNNCWKEKQQKE-GLLYRARYFGDTDMYHRAQKMGTPSCSRLSEVQAS 372



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>MALQ_CHLCV (O34022) 4-alpha-glucanotransferase (EC 2.4.1.25) (Amylomaltase)|
           (Disproportionating enzyme) (D-enzyme)
          Length = 530

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 18/90 (20%)
 Frame = +3

Query: 228 WKAFTPWPKF--------LSRRNPCGIGRITVLLPQISEA-YHSVVSGRLAPIGDAA--A 374
           WK     PK         L  RN CGIG    L+P IS    H     ++ PI D+   +
Sbjct: 20  WKTLGIMPKHGICLPLFSLHTRNSCGIGEFLDLIPMISWCRKHGFQIIQILPINDSGEDS 79

Query: 375 QPYNSVLLSSSNP-------SQHAAPVLYA 443
            PYNS+   + NP         HA  V YA
Sbjct: 80  SPYNSISSVALNPLYLSLASLPHAQSVAYA 109



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>COS12_YEAST (P53053) Protein COS12|
          Length = 380

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +2

Query: 8   FIYIHMSAL*SAPKKRNKLHILSSSYGCIRLNTVRI-HQGGVCSHR---MHLFHKIYY*S 175
           F   +++ L + P+ RN LHIL   Y C  L+++ I +  G+   R   M+L HK+ + S
Sbjct: 240 FSIAYLNGLLTIPRLRNSLHIL---YVCAVLSSMIIEYLIGIDKFRFKSMNLIHKLQFLS 296

Query: 176 KLTC 187
            +TC
Sbjct: 297 YITC 300



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>MALQ_CHLPN (Q9Z8L2) 4-alpha-glucanotransferase (EC 2.4.1.25) (Amylomaltase)|
           (Disproportionating enzyme) (D-enzyme)
          Length = 526

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
 Frame = +3

Query: 192 LQFETDNQRSKYWKAFTPWPKF--------LSRRNPCGIGRITVLLPQIS---EAYHSVV 338
           L++   +  +  WK     PK         +  +N CGIG    L+P IS   +   SV+
Sbjct: 4   LKYTKHSPSAHAWKLIGTSPKHGIYLPLFSIHTKNSCGIGEFLDLIPLISWCQKQGFSVI 63

Query: 339 SGRLAPIGDAA--AQPYNSVLLSSSNP 413
             +L P+ D      PYNS+   + NP
Sbjct: 64  --QLLPLNDTGEDTSPYNSISSVALNP 88



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>DCD_SULSO (Q980T7) Probable deoxycytidine triphosphate deaminase (EC|
           3.5.4.13) (dCTP deaminase)
          Length = 184

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -2

Query: 537 YPYEHKFQTQRGVTYYVKLPNFEDQ-----YPHQS 448
           YPY+ K+Q Q+GVT    LP F  Q     Y HQS
Sbjct: 153 YPYQGKYQGQKGVT----LPKFNSQISSFYYQHQS 183



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>GLTP_ECOLI (P21345) Proton glutamate symport protein (Glutamate-aspartate|
           carrier protein)
          Length = 437

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +1

Query: 355 PLATLQLNPTILCYYRVVIPLNMPLQCCTLSALVWILILKIRQLDIVCYSTLGLKFVLIR 534
           PLA L L       +  ++ L +  + C LS  VWILI  ++   I+ YST   + VL R
Sbjct: 229 PLAKLVLLVHFAILFFALVVLGIVARLCGLS--VWILIRILKDELILAYSTASSESVLPR 286

Query: 535 V 537
           +
Sbjct: 287 I 287



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>GR97A_DROME (Q8IMQ6) Putative gustatory receptor 97a|
          Length = 423

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 30  HCDQHLRNVTNYISFQVVTAAYALTPLGYIKAVCVVIECTYST 158
           H D   + V N    QVVT  Y L PLG ++    ++   +S+
Sbjct: 361 HADARFKQVVNAFWLQVVTINYKLMPLGLLELNTSLVNKVFSS 403


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,008,225
Number of Sequences: 219361
Number of extensions: 1787515
Number of successful extensions: 4541
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4540
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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