ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37i12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 375 e-100
2dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic D... 375 e-100
3ref|NM_193459.1| Oryza sativa (japonica cultivar-group), predic... 373 e-100
4gb|BT016873.1| Zea mays clone Contig706 mRNA sequence 371 2e-99
5gb|BT017769.1| Zea mays clone EL01N0502D08.c mRNA sequence 361 2e-96
6gb|AY110279.1| Zea mays CL11333_1 mRNA sequence 107 5e-20
7gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome... 42 2.4
8gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosom... 42 2.4
9emb|CT025867.20| Mouse DNA sequence from clone RP24-318I24 on ch... 42 2.4
10emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on ch... 42 2.4
11emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on ch... 42 2.4
12gb|AC156543.10| Mus musculus chromosome 15, clone RP23-220F2, co... 42 2.4
13gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 9.5
14ref|NM_112236.1| Arabidopsis thaliana unknown protein AT3G13830 ... 40 9.5
15gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.5
16ref|XM_450194.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.5
17gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
18gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
19gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosom... 40 9.5
20gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, com... 40 9.5
21ref|XM_815425.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.5
22gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, compl... 40 9.5
23emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC... 40 9.5
24emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22,... 40 9.5
25gb|DQ374076.1| Beta vulgaris chromosome 9 clone BAC137 genomic s... 40 9.5
26gb|AC025458.5| Homo sapiens chromosome 5 clone CTD-2206G10, comp... 40 9.5
27emb|CR523444.1| Gallus gallus finished cDNA, clone ChEST32k18 40 9.5
28gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosom... 40 9.5
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
31dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
32dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
33dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.5
34dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
35emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chr... 40 9.5
36emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chr... 40 9.5
37emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on ch... 40 9.5
38emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chr... 40 9.5 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  375 bits (189), Expect = e-100
 Identities = 353/407 (86%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                            
Query: 291      attactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggcta 350
                |||||||||||||||||||||||||| | ||||| || ||||| || |||| |||||  |
Sbjct: 20985479 attactgtgctgttgcctcaaatttccggagcatgtcgcagtgcggcgtctcgtaggaaa 20985420

                                                                            
Query: 351      gcccccattggcgacgctgcagctcaaccctacaattctgtgttattatcgagtagtaat 410
                ||||||| ||||||||||||| ||||||||||||||||||||  | ||| ||| ||||||
Sbjct: 20985419 gcccccagtggcgacgctgcacctcaaccctacaattctgtgagagtattgagaagtaat 20985360

                                                                            
Query: 411      ccctctcaacatgccgctccagtgttgtacgctcagtgctctggtgtggatactgatcct 470
                ||| |||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 20985359 cccgctcaacatgccgttcgagtgttgcacgctcagtgctctggtgtggatactgctcct 20985300

                                                                            
Query: 471      caaaattaggcagcttgacatagtatgttactccacgttgggtttgaaatttgtgctcat 530
                |||| ||||||| ||||||||||||||| |||||||||  |||||| |||||||||||||
Sbjct: 20985299 caaagttaggcaacttgacatagtatgtgactccacgtgtggtttggaatttgtgctcat 20985240

                                                                            
Query: 531      aagggtaggagcgggatagggagtagactggctcagaggatggcaggaagttgagcaaca 590
                ||||||| |||||||| || |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 20985239 aagggtaagagcgggacagcgagtagaccggttcagaagatggcaggaagttgagcaaca 20985180

                                                                            
Query: 591      gaagcagcaggacaggcaacagctggacaagcatacggacagttgaaccaccagaaccct 650
                | ||||  || |||||||||||||| | |||||| |||| ||| || ||||| |||   |
Sbjct: 20985179 gcagcaatagaacaggcaacagctgaataagcatccggagagtggagccaccggaa---t 20985123

                                                               
Query: 651      gctgcgcaccatgagcatgatgcatcccgccagtcctgaaatgaaac 697
                  ||||| |||||  |||| ||||| |||||||||||||||||||||
Sbjct: 20985122 tttgcgccccatggccatggtgcatgccgccagtcctgaaatgaaac 20985076



 Score =  101 bits (51), Expect = 3e-18
 Identities = 121/141 (85%), Gaps = 5/141 (3%)
 Strand = Plus / Minus

                                                                            
Query: 117      atcaaggcggtgtgtgtagtcatcgaatgcacttattccacaaaatttactattagtcca 176
                |||||||| | |||||||||||||||| |||||||||||||||||||||| |  |||| |
Sbjct: 20988283 atcaaggcagagtgtgtagtcatcgaaggcacttattccacaaaatttaccacgagtcaa 20988224

                                                                            
Query: 177      aactgacttgttcgcctccaatttgaaacagacaatcaacggagcaagtattggaaagcc 236
                |||| | ||| || ||||||||||||   || | ||||| ||||||||  ||||||| ||
Sbjct: 20988223 aactaatttg-tcccctccaatttga---agcctatcaaaggagcaagcgttggaaa-cc 20988169

                                     
Query: 237      tttacaccatggccaaagttc 257
                |||||||||||||||||||||
Sbjct: 20988168 tttacaccatggccaaagttc 20988148
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>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1014_G12
          Length = 158830

 Score =  375 bits (189), Expect = e-100
 Identities = 353/407 (86%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                         
Query: 291   attactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggcta 350
             |||||||||||||||||||||||||| | ||||| || ||||| || |||| |||||  |
Sbjct: 48681 attactgtgctgttgcctcaaatttccggagcatgtcgcagtgcggcgtctcgtaggaaa 48622

                                                                         
Query: 351   gcccccattggcgacgctgcagctcaaccctacaattctgtgttattatcgagtagtaat 410
             ||||||| ||||||||||||| ||||||||||||||||||||  | ||| ||| ||||||
Sbjct: 48621 gcccccagtggcgacgctgcacctcaaccctacaattctgtgagagtattgagaagtaat 48562

                                                                         
Query: 411   ccctctcaacatgccgctccagtgttgtacgctcagtgctctggtgtggatactgatcct 470
             ||| |||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 48561 cccgctcaacatgccgttcgagtgttgcacgctcagtgctctggtgtggatactgctcct 48502

                                                                         
Query: 471   caaaattaggcagcttgacatagtatgttactccacgttgggtttgaaatttgtgctcat 530
             |||| ||||||| ||||||||||||||| |||||||||  |||||| |||||||||||||
Sbjct: 48501 caaagttaggcaacttgacatagtatgtgactccacgtgtggtttggaatttgtgctcat 48442

                                                                         
Query: 531   aagggtaggagcgggatagggagtagactggctcagaggatggcaggaagttgagcaaca 590
             ||||||| |||||||| || |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 48441 aagggtaagagcgggacagcgagtagaccggttcagaagatggcaggaagttgagcaaca 48382

                                                                         
Query: 591   gaagcagcaggacaggcaacagctggacaagcatacggacagttgaaccaccagaaccct 650
             | ||||  || |||||||||||||| | |||||| |||| ||| || ||||| |||   |
Sbjct: 48381 gcagcaatagaacaggcaacagctgaataagcatccggagagtggagccaccggaa---t 48325

                                                            
Query: 651   gctgcgcaccatgagcatgatgcatcccgccagtcctgaaatgaaac 697
               ||||| |||||  |||| ||||| |||||||||||||||||||||
Sbjct: 48324 tttgcgccccatggccatggtgcatgccgccagtcctgaaatgaaac 48278



 Score =  101 bits (51), Expect = 3e-18
 Identities = 121/141 (85%), Gaps = 5/141 (3%)
 Strand = Plus / Minus

                                                                         
Query: 117   atcaaggcggtgtgtgtagtcatcgaatgcacttattccacaaaatttactattagtcca 176
             |||||||| | |||||||||||||||| |||||||||||||||||||||| |  |||| |
Sbjct: 51485 atcaaggcagagtgtgtagtcatcgaaggcacttattccacaaaatttaccacgagtcaa 51426

                                                                         
Query: 177   aactgacttgttcgcctccaatttgaaacagacaatcaacggagcaagtattggaaagcc 236
             |||| | ||| || ||||||||||||   || | ||||| ||||||||  ||||||| ||
Sbjct: 51425 aactaatttg-tcccctccaatttga---agcctatcaaaggagcaagcgttggaaa-cc 51371

                                  
Query: 237   tttacaccatggccaaagttc 257
             |||||||||||||||||||||
Sbjct: 51370 tttacaccatggccaaagttc 51350
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>ref|NM_193459.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score =  373 bits (188), Expect = e-100
 Identities = 352/406 (86%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 292  ttactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggctag 351
            ||||||||||||||||||||||||| | ||||| || ||||| || |||| |||||  ||
Sbjct: 1143 ttactgtgctgttgcctcaaatttccggagcatgtcgcagtgcggcgtctcgtaggaaag 1084

                                                                        
Query: 352  cccccattggcgacgctgcagctcaaccctacaattctgtgttattatcgagtagtaatc 411
            |||||| ||||||||||||| ||||||||||||||||||||  | ||| ||| |||||||
Sbjct: 1083 cccccagtggcgacgctgcacctcaaccctacaattctgtgagagtattgagaagtaatc 1024

                                                                        
Query: 412  cctctcaacatgccgctccagtgttgtacgctcagtgctctggtgtggatactgatcctc 471
            || |||||||||||| || ||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 1023 ccgctcaacatgccgttcgagtgttgcacgctcagtgctctggtgtggatactgctcctc 964

                                                                        
Query: 472  aaaattaggcagcttgacatagtatgttactccacgttgggtttgaaatttgtgctcata 531
            ||| ||||||| ||||||||||||||| |||||||||  |||||| ||||||||||||||
Sbjct: 963  aaagttaggcaacttgacatagtatgtgactccacgtgtggtttggaatttgtgctcata 904

                                                                        
Query: 532  agggtaggagcgggatagggagtagactggctcagaggatggcaggaagttgagcaacag 591
            |||||| |||||||| || |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 903  agggtaagagcgggacagcgagtagaccggttcagaagatggcaggaagttgagcaacag 844

                                                                        
Query: 592  aagcagcaggacaggcaacagctggacaagcatacggacagttgaaccaccagaaccctg 651
             ||||  || |||||||||||||| | |||||| |||| ||| || ||||| |||   | 
Sbjct: 843  cagcaatagaacaggcaacagctgaataagcatccggagagtggagccaccggaa---tt 787

                                                          
Query: 652  ctgcgcaccatgagcatgatgcatcccgccagtcctgaaatgaaac 697
             ||||| |||||  |||| ||||| |||||||||||||||||||||
Sbjct: 786  ttgcgccccatggccatggtgcatgccgccagtcctgaaatgaaac 741
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>gb|BT016873.1| Zea mays clone Contig706 mRNA sequence
          Length = 1277

 Score =  371 bits (187), Expect = 2e-99
 Identities = 313/355 (88%)
 Strand = Plus / Plus

                                                                       
Query: 291 attactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggcta 350
           |||||| |||||  |||||||| || | |||||||||||| |||||||||||||| |  |
Sbjct: 406 attactttgctgcagcctcaaaatttttaagcatatcacaatgtggtgtctggtatgaca 465

                                                                       
Query: 351 gcccccattggcgacgctgcagctcaaccctacaattctgtgttattatcgagtagtaat 410
           |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||| ||||
Sbjct: 466 gcccccattggcgacgctgcagctcagccctgcaattctgtgtgattatggagtaataat 525

                                                                       
Query: 411 ccctctcaacatgccgctccagtgttgtacgctcagtgctctggtgtggatactgatcct 470
           |||||||||||||||||||||| || |  ||||||||||| |||||||||||||| ||||
Sbjct: 526 ccctctcaacatgccgctccagcgtcgctcgctcagtgctttggtgtggatactgctcct 585

                                                                       
Query: 471 caaaattaggcagcttgacatagtatgttactccacgttgggtttgaaatttgtgctcat 530
           | ||||||| || ||||||||||||||  ||||||||| ||||||| || || |||||||
Sbjct: 586 cgaaattagacatcttgacatagtatgcaactccacgtggggtttggaacttatgctcat 645

                                                                       
Query: 531 aagggtaggagcgggatagggagtagactggctcagaggatggcaggaagttgagcaaca 590
           ||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct: 646 aagggtatgaacgggacagcgagtagacaggctcagaggatggcaggaagttgagcaaca 705

                                                                  
Query: 591 gaagcagcaggacaggcaacagctggacaagcatacggacagttgaaccaccaga 645
           | ||||| ||||||||||||||||| | |||||| | ||||||||| ||||||||
Sbjct: 706 gcagcagtaggacaggcaacagctgaataagcatcctgacagttgagccaccaga 760



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 128 gtgtgtagtcatcgaatgcacttattccacaaaatttacta 168
           |||| |||| ||| || ||||||||||||||||||||||||
Sbjct: 251 gtgtatagttatcaaaggcacttattccacaaaatttacta 291
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>gb|BT017769.1| Zea mays clone EL01N0502D08.c mRNA sequence
          Length = 1522

 Score =  361 bits (182), Expect = 2e-96
 Identities = 311/354 (87%)
 Strand = Plus / Minus

                                                                        
Query: 291  attactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggcta 350
            ||||||||| |||||||||||| || |||||||||||||| |||||||||||||| |  |
Sbjct: 1204 attactgtgttgttgcctcaaacttttgaagcatatcacaatgtggtgtctggtatgaca 1145

                                                                        
Query: 351  gcccccattggcgacgctgcagctcaaccctacaattctgtgttattatcgagtagtaat 410
              ||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||
Sbjct: 1144 agccccattggcgacgctgcagctcgaccctacaattctgtgtgattatggaataataat 1085

                                                                        
Query: 411  ccctctcaacatgccgctccagtgttgtacgctcagtgctctggtgtggatactgatcct 470
            ||||||||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||
Sbjct: 1084 ccctctcaacatgccgctccactgttgctcgctcagtgctttggtgtggatactgctcct 1025

                                                                        
Query: 471  caaaattaggcagcttgacatagtatgttactccacgttgggtttgaaatttgtgctcat 530
            ||||||||| || ||||||||||||||  ||||||||  ||||||| || || |||||||
Sbjct: 1024 caaaattagacatcttgacatagtatggaactccacggggggtttggaacttatgctcat 965

                                                                        
Query: 531  aagggtaggagcgggatagggagtagactggctcagaggatggcaggaagttgagcaaca 590
            |||||||||| || || || |||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 964  aagggtaggaacgagagagcgagtagacaggctccgaggatggcagaaagttgagcaaca 905

                                                                  
Query: 591  gaagcagcaggacaggcaacagctggacaagcatacggacagttgaaccaccag 644
            | ||||| ||||||||||||||||| | |||||| | ||||| ||| |||||||
Sbjct: 904  gcagcagtaggacaggcaacagctgaataagcatcctgacaggtgagccaccag 851



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 670 atgcatcccgccagtcctgaaatg 693
           ||||||||| ||||||||||||||
Sbjct: 831 atgcatcccaccagtcctgaaatg 808
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>gb|AY110279.1| Zea mays CL11333_1 mRNA sequence
          Length = 594

 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                       
Query: 291 attactgtgctgttgcctcaaatttctgaagcatatcacagtgtggtgtctggtaggcta 350
           |||||||||||| ||||||||| || |||||||||||||| |||||||||||||| |  |
Sbjct: 475 attactgtgctggtgcctcaaacttttgaagcatatcacaatgtggtgtctggtatgaca 534

                                             
Query: 351 gcccccattggcgacgctgcagctcaaccctaca 384
             ||||||||||||||||||||||| ||||||||
Sbjct: 535 agccccattggcgacgctgcagctcgaccctaca 568
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>gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome 7, complete sequence
          Length = 183421

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     attcatatacatacacatgtctgca 31
             |||||||||||||||||| ||||||
Sbjct: 60358 attcatatacatacacatatctgca 60334
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>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete
            sequence
          Length = 180727

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 589  cagaagcagcaggacaggcaa 609
            |||||||||||||||||||||
Sbjct: 4701 cagaagcagcaggacaggcaa 4681
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>emb|CT025867.20| Mouse DNA sequence from clone RP24-318I24 on chromosome 17, complete
             sequence
          Length = 92816

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 589   cagaagcagcaggacaggcaa 609
             |||||||||||||||||||||
Sbjct: 17284 cagaagcagcaggacaggcaa 17304
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>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete
              sequence
          Length = 219682

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 589    cagaagcagcaggacaggcaa 609
              |||||||||||||||||||||
Sbjct: 141050 cagaagcagcaggacaggcaa 141070
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>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
              sequence
          Length = 165908

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 221    caagtattggaaagcctttacacca 245
              ||||| |||||||||||||||||||
Sbjct: 115887 caagttttggaaagcctttacacca 115863
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>gb|AC156543.10| Mus musculus chromosome 15, clone RP23-220F2, complete sequence
          Length = 199715

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      tagaagattcatatacataca 21
              |||||||||||||||||||||
Sbjct: 124565 tagaagattcatatacataca 124545
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 453     ggtgtggatactgatcctcaaaat 476
               |||||||||||||||||| |||||
Sbjct: 1249879 ggtgtggatactgatcctaaaaat 1249902
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>ref|NM_112236.1| Arabidopsis thaliana unknown protein AT3G13830 mRNA, complete cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 agtcatcgaatgcacttatt 153
           ||||||||||||||||||||
Sbjct: 286 agtcatcgaatgcacttatt 267
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    cgacgctgcagctcaaccct 381
              ||||||||||||||||||||
Sbjct: 407453 cgacgctgcagctcaaccct 407434
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>ref|XM_450194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 12969

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 575 aggaagttgagcaacagaagcagcagga 602
           ||||| ||||| ||||||||||||||||
Sbjct: 665 aggaacttgagaaacagaagcagcagga 692
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   agtgtggtgtctggtaggct 349
             ||||||||||||||||||||
Sbjct: 14874 agtgtggtgtctggtaggct 14893
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   agtgtggtgtctggtaggct 349
             ||||||||||||||||||||
Sbjct: 62061 agtgtggtgtctggtaggct 62042
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>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence
          Length = 235813

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     atacatacacatgtctgcat 32
              ||||||||||||||||||||
Sbjct: 114015 atacatacacatgtctgcat 114034
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>gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, complete sequence
          Length = 162417

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   agtgtggtgtctggtaggct 349
             ||||||||||||||||||||
Sbjct: 22962 agtgtggtgtctggtaggct 22943
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>ref|XM_815425.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508909.250) partial mRNA
          Length = 2457

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  ttgagcaacagaagcagcag 600
            ||||||||||||||||||||
Sbjct: 1559 ttgagcaacagaagcagcag 1578
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>gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, complete sequence
          Length = 195086

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     tagaagattcatatacatacacat 24
             ||||| ||||||||||||||||||
Sbjct: 39586 tagaacattcatatacatacacat 39563
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>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              4/6
          Length = 282183

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 453    ggtgtggatactgatcctcaaaat 476
              |||||||||||||||||| |||||
Sbjct: 188982 ggtgtggatactgatcctaaaaat 189005
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>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence
          Length = 171896

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctaagaaacgtaacaaatta 64
             ||||||||||||||||||||
Sbjct: 33350 ctaagaaacgtaacaaatta 33369
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>gb|DQ374076.1| Beta vulgaris chromosome 9 clone BAC137 genomic sequence
          Length = 6602

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    gaagattcatatacatacac 22
            ||||||||||||||||||||
Sbjct: 3555 gaagattcatatacatacac 3536
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>gb|AC025458.5| Homo sapiens chromosome 5 clone CTD-2206G10, complete sequence
          Length = 119760

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ctccaatttgaaacagacaa 211
             ||||||||||||||||||||
Sbjct: 66381 ctccaatttgaaacagacaa 66400
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>emb|CR523444.1| Gallus gallus finished cDNA, clone ChEST32k18
          Length = 1998

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  gaattactgtgctgttgcct 308
            ||||||||||||||||||||
Sbjct: 1745 gaattactgtgctgttgcct 1764
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>gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosome 16, complete sequence
          Length = 191677

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      tagaagattcatatacatacacat 24
              ||||| ||||||||||||||||||
Sbjct: 115279 tagaacattcatatacatacacat 115256
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 575      aggaagttgagcaacagaagcagcagga 602
                ||||| ||||| ||||||||||||||||
Sbjct: 21197298 aggaacttgagaaacagaagcagcagga 21197325
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 330      agtgtggtgtctggtaggct 349
                ||||||||||||||||||||
Sbjct: 12724882 agtgtggtgtctggtaggct 12724863
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>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   agtgtggtgtctggtaggct 349
             ||||||||||||||||||||
Sbjct: 68877 agtgtggtgtctggtaggct 68858
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>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    agtgtggtgtctggtaggct 349
              ||||||||||||||||||||
Sbjct: 110851 agtgtggtgtctggtaggct 110832
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>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4
          Length = 38810

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   agtcatcgaatgcacttatt 153
             ||||||||||||||||||||
Sbjct: 18348 agtcatcgaatgcacttatt 18329
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>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0705E11
          Length = 140729

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 575   aggaagttgagcaacagaagcagcagga 602
             ||||| ||||| ||||||||||||||||
Sbjct: 68055 aggaacttgagaaacagaagcagcagga 68082
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>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete
              sequence
          Length = 235241

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    gaggatggcaggaagttgag 585
              ||||||||||||||||||||
Sbjct: 211610 gaggatggcaggaagttgag 211629
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>emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chromosome 17, complete
              sequence
          Length = 194694

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 601    gacaggcaacagctggacaa 620
              ||||||||||||||||||||
Sbjct: 155436 gacaggcaacagctggacaa 155455
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>emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on chromosome 17, complete
             sequence
          Length = 172696

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   agtgtggtgtctggtaggct 349
             ||||||||||||||||||||
Sbjct: 61085 agtgtggtgtctggtaggct 61104
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>emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chromosome 2, complete
             sequence
          Length = 182726

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    catatacatacacatgtctg 29
             ||||||||||||||||||||
Sbjct: 25661 catatacatacacatgtctg 25642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,762,592
Number of Sequences: 3902068
Number of extensions: 5762592
Number of successful extensions: 122013
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121824
Number of HSP's gapped (non-prelim): 185
length of query: 697
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 674
effective length of database: 17,143,297,704
effective search space: 11554582652496
effective search space used: 11554582652496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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