ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarbox... 1003 0.0
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 373 e-100
3gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 373 e-100
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 373 e-100
5dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
6gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (... 303 4e-79
7gb|AY111127.1| Zea mays CL1743_1 mRNA sequence 262 1e-66
8gb|AF119232.1|AF119232 Oryza sativa uroporphyrinogen decarboxyla... 248 2e-62
9gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 218 2e-53
10emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarbox... 76 2e-10
11gb|BT013117.1| Lycopersicon esculentum clone 114407R, mRNA sequence 68 4e-08
12gb|AC151725.26| Medicago truncatula clone mth2-164l16, complete ... 68 4e-08
13gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete s... 68 4e-08
14ref|NM_129611.3| Arabidopsis thaliana uroporphyrinogen decarboxy... 56 1e-04
15gb|AY142634.1| Arabidopsis thaliana putative uroporphyrinogen de... 56 1e-04
16gb|AY035057.1| Arabidopsis thaliana putative uroporphyrinogen de... 56 1e-04
17gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map ... 56 1e-04
18emb|BX820790.1|CNS0AA7W Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19emb|BX820062.1|CNS0AA6S Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20emb|BX819829.1|CNS0AA6W Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21emb|BX819769.1|CNS0AA6J Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
23dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
24dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 46 0.14
25gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cance... 44 0.54
26emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 i... 44 0.54
27gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer... 44 0.54
28emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chr... 44 0.54
29gb|AC120359.8| Mus musculus chromosome 5, clone RP24-285E7, comp... 42 2.1
30gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, com... 42 2.1
31gb|AC124736.3| Mus musculus BAC clone RP23-318J20 from chromosom... 42 2.1
32gb|AC117417.5| Homo sapiens 3 BAC RP11-8L15 (Roswell Park Cancer... 42 2.1
33gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete s... 42 2.1
34gb|AC117435.4| Homo sapiens 3 BAC RP11-71I3 (Roswell Park Cancer... 42 2.1
35gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, compl... 42 2.1
36gb|AY525783.1| Raja porosa mitochondrion, complete genome 42 2.1
37gb|AC166362.5| Mus musculus BAC clone RP23-299O17 from chromosom... 40 8.5
38ref|NM_001034850.1| Homo sapiens hypothetical protein FLJ20152 (... 40 8.5
39ref|NM_019000.3| Homo sapiens hypothetical protein FLJ20152 (FLJ... 40 8.5
40gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, co... 40 8.5
41gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 8.5
42gb|AC127265.4| Mus musculus BAC clone RP24-341O20 from chromosom... 40 8.5
43gb|AC122476.4| Mus musculus BAC clone RP24-334L2 from chromosome... 40 8.5
44gb|AC141430.3| Mus musculus BAC clone RP23-95O14 from chromosome... 40 8.5
45gb|AC129201.3| Mus musculus BAC clone RP24-224A15 from chromosom... 40 8.5
46gb|BC030517.1| Homo sapiens hypothetical protein FLJ20152, mRNA ... 40 8.5
47gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome... 40 8.5
48emb|AL832438.1|HSM803746 Homo sapiens mRNA; cDNA DKFZp762C144 (f... 40 8.5
49gb|AC109458.3| Homo sapiens chromosome 5 clone RP11-257I8, compl... 40 8.5
50gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, co... 40 8.5
51gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, compl... 40 8.5
52gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 40 8.5
53emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in... 40 8.5
54gb|AC155809.3| Mus musculus BAC clone RP24-249H19 from chromosom... 40 8.5
55gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Can... 40 8.5
56dbj|AK000159.1| Homo sapiens cDNA FLJ20152 fis, clone COL08515 40 8.5
57dbj|AK024920.1| Homo sapiens cDNA: FLJ21267 fis, clone COL01717 40 8.5
58emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J... 40 8.5
59emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in ... 40 8.5
60gb|AY708134.1| Philautus charius isolate 081.PchaND1 NADH dehydr... 40 8.5
61gb|AC175115.1| Mus musculus BAC clone RP23-395E24 from chromosom... 40 8.5
62dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
63gb|AC138119.5| Mus musculus BAC clone RP23-307D8 from chromosome... 40 8.5
64gb|AC145974.4| Gallus gallus BAC clone CH261-3L16 from chromosom... 40 8.5
65gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, comple... 40 8.5
66emb|AL831712.12| Mouse DNA sequence from clone RP23-118A20 on ch... 40 8.5
67emb|CT009618.10| Zebrafish DNA sequence from clone CH73-147E18 i... 40 8.5
68dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 8.5
69dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.5
70emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chro... 40 8.5 
>emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarboxylase
          Length = 1208

 Score = 1003 bits (506), Expect = 0.0
 Identities = 519/523 (99%), Gaps = 1/523 (0%)
 Strand = Plus / Minus

                                                                        
Query: 100  acacctcaattagtatatgcaatatatgcttagagtattacaatgaaatggaaactgaaa 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 acacctcaattagtatatgcaatatatgcttagagtattacaatgaaatggaaactgaaa 1138

                                                                        
Query: 160  tgcagaacacataagcaatcacaaaaagatgtgttcgtcaggtaccctatgctagacatg 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 tgcagaacacataagcaatcacaaaaagatgtgttcgtcaggtaccctatgctagacatg 1078

                                                                        
Query: 220  tggcttcctgcatctatcctcaagcagtggcatctacaacttctgccggctgggagaaag 279
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 -ggcttcctgcatctatcctcaagcagtggcatctacaacttctgccggctgggagaaag 1019

                                                                        
Query: 280  gaacaaattcaacaaccaaggtctttcagtatctgatcccttttgcaacctcaaagaaat 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gaacaaattcaacaaccaaggtctttcagtatctgatcccttttgcaacctcaaagaaat 959

                                                                        
Query: 340  gggcaacattttcctcgggagtccccaccttaatgccatgaccaaggttcaatacatgtc 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958  gggcaacattttcctcgggagtccccaccttaatgccatgaccaaggttcaatacatgtc 899

                                                                        
Query: 400  cttgactaccagcctnntgcacggtgtcgtaaatccgcttggttatgaactctttcgatc 459
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  cttgactaccagccttctgcacggtgtcgtaaatccgcttggttatgaactctttcgatc 839

                                                                        
Query: 460  caaaaagaacaccagggtccacgttcccttgaactgctatgttggatcccaatcgtttcc 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  caaaaagaacaccagggtccacgttcccttgaactgctatgttggatcccaatcgtttcc 779

                                                                        
Query: 520  taccctcagccatatcaactgtccagtccaaactaacaacatcaacacccgtcaacggan 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 778  taccctcagccatatcaactgtccagtccaaactaacaacatcaacacccgtcaacggaa 719

                                                       
Query: 580  gcctttccagcaatccaccagatccgcttgcatataatatcag 622
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  gcctttccagcaatccaccagatccgcttgcatataatatcag 676
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  373 bits (188), Expect = e-100
 Identities = 290/325 (89%)
 Strand = Plus / Minus

                                                                            
Query: 298      aggtctttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgg 357
                |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12506807 aggtatttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcag 12506748

                                                                            
Query: 358      gagtccccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnnt 417
                |||| || |||||||||||||||||||||||||||||||| ||   | ||||||| |  |
Sbjct: 12506747 gagtgcctaccttaatgccatgaccaaggttcaatacatgcccactattaccagctttct 12506688

                                                                            
Query: 418      gcacggtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggt 477
                |||| |||||  ||||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 12506687 gcacagtgtcaaaaatccgcttgcttatgaactcttttgacccaaaaagaacgccagggt 12506628

                                                                            
Query: 478      ccacgttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaa 537
                | || ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 12506627 caacattcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaa 12506568

                                                                            
Query: 538      ctgtccagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccac 597
                | ||||||||||| ||||||||||||||||| ||||  ||| |||| ||||||| |||||
Sbjct: 12506567 ccgtccagtccaagctaacaacatcaacacctgtcagtggaagcctctccagcagtccac 12506508

                                         
Query: 598      cagatccgcttgcatataatatcag 622
                ||||||| |||||||||| ||||||
Sbjct: 12506507 cagatccacttgcatatagtatcag 12506483



 Score =  218 bits (110), Expect = 2e-53
 Identities = 223/260 (85%), Gaps = 5/260 (1%)
 Strand = Plus / Plus

                                                                            
Query: 363      cccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnntgcacg 422
                ||||||||| ||||||| ||||||||||||||||| ||   | ||||||| |  ||||  
Sbjct: 12617853 cccaccttagtgccatggccaaggttcaatacatgcccactattaccagctttctgca-- 12617910

                                                                            
Query: 423      gtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggtccacg 482
                ||||   ||||||| ||| ||||||||||||| || ||||||||||| |||||||| || 
Sbjct: 12617911 gtgtgaaaaatccggttgcttatgaactctttggacccaaaaagaacgccagggtcaaca 12617970

                                                                            
Query: 483      ttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaactgtc 542
                ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||| |||
Sbjct: 12617971 ttcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaaccgtc 12618030

                                                                            
Query: 543      cagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccaccagat 602
                |   |||| ||||||||||||||||| ||||| ||| |||| ||||||| ||||||||||
Sbjct: 12618031 c---ccaagctaacaacatcaacacctgtcaatggaagcctctccagcagtccaccagat 12618087

                                    
Query: 603      ccgcttgcatataatatcag 622
                || |||||||||||||||||
Sbjct: 12618088 ccacttgcatataatatcag 12618107



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                            
Query: 183      aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
                |||||||||| || |||||||  ||| ||||||||||  |||||||||||||||||||||
Sbjct: 12506927 aaaagatgtgctcttcaggtattctacgctagacatg--gcttcctgcatctatcctcaa 12506870

                                          
Query: 243      gcagtggcatctacaacttctgccgg 268
                ||||  | ||||||||||||||||||
Sbjct: 12506869 gcagcagaatctacaacttctgccgg 12506844



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 68       tatacatggtataaacaagtaggcactttcttacacctcaa 108
                ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 12617604 tatacttgatataaacaagtaggcactttcttacacctcaa 12617644



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 68       tatacatggtataaacaagtaggcactttcttacacctcaa 108
                ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 12507028 tatacttgctataaacaagtaggaactttcttacacctcaa 12506988



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/86 (83%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                            
Query: 183      aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
                |||||||||| || |||||||  ||| |||||| |||  ||||||| |||||||||||||
Sbjct: 12617706 aaaagatgtgctcttcaggtattctacgctagatatg--gcttccttcatctatcctcaa 12617763

                                          
Query: 243      gcagtggcatctacaacttctgccgg 268
                ||||  | |||||| |||| ||||||
Sbjct: 12617764 gcagcagaatctactacttttgccgg 12617789



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 298      aggtctttcagtatctgatcccttttgc 325
                |||| |||||||||||||||||||||||
Sbjct: 12617826 aggtgtttcagtatctgatcccttttgc 12617853
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>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score =  373 bits (188), Expect = e-100
 Identities = 290/325 (89%)
 Strand = Plus / Plus

                                                                         
Query: 298   aggtctttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgg 357
             |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 81134 aggtatttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcag 81193

                                                                         
Query: 358   gagtccccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnnt 417
             |||| || |||||||||||||||||||||||||||||||| ||   | ||||||| |  |
Sbjct: 81194 gagtgcctaccttaatgccatgaccaaggttcaatacatgcccactattaccagctttct 81253

                                                                         
Query: 418   gcacggtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggt 477
             |||| |||||  ||||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 81254 gcacagtgtcaaaaatccgcttgcttatgaactcttttgacccaaaaagaacgccagggt 81313

                                                                         
Query: 478   ccacgttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaa 537
             | || ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 81314 caacattcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaa 81373

                                                                         
Query: 538   ctgtccagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccac 597
             | ||||||||||| ||||||||||||||||| ||||  ||| |||| ||||||| |||||
Sbjct: 81374 ccgtccagtccaagctaacaacatcaacacctgtcagtggaagcctctccagcagtccac 81433

                                      
Query: 598   cagatccgcttgcatataatatcag 622
             ||||||| |||||||||| ||||||
Sbjct: 81434 cagatccacttgcatatagtatcag 81458



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                         
Query: 183   aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
             |||||||||| || |||||||  ||| ||||||||||  |||||||||||||||||||||
Sbjct: 81014 aaaagatgtgctcttcaggtattctacgctagacatg--gcttcctgcatctatcctcaa 81071

                                       
Query: 243   gcagtggcatctacaacttctgccgg 268
             ||||  | ||||||||||||||||||
Sbjct: 81072 gcagcagaatctacaacttctgccgg 81097



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 68    tatacatggtataaacaagtaggcactttcttacacctcaa 108
             ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 80913 tatacttgctataaacaagtaggaactttcttacacctcaa 80953
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  373 bits (188), Expect = e-100
 Identities = 290/325 (89%)
 Strand = Plus / Minus

                                                                            
Query: 298      aggtctttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgg 357
                |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12503570 aggtatttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcag 12503511

                                                                            
Query: 358      gagtccccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnnt 417
                |||| || |||||||||||||||||||||||||||||||| ||   | ||||||| |  |
Sbjct: 12503510 gagtgcctaccttaatgccatgaccaaggttcaatacatgcccactattaccagctttct 12503451

                                                                            
Query: 418      gcacggtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggt 477
                |||| |||||  ||||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 12503450 gcacagtgtcaaaaatccgcttgcttatgaactcttttgacccaaaaagaacgccagggt 12503391

                                                                            
Query: 478      ccacgttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaa 537
                | || ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 12503390 caacattcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaa 12503331

                                                                            
Query: 538      ctgtccagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccac 597
                | ||||||||||| ||||||||||||||||| ||||  ||| |||| ||||||| |||||
Sbjct: 12503330 ccgtccagtccaagctaacaacatcaacacctgtcagtggaagcctctccagcagtccac 12503271

                                         
Query: 598      cagatccgcttgcatataatatcag 622
                ||||||| |||||||||| ||||||
Sbjct: 12503270 cagatccacttgcatatagtatcag 12503246



 Score =  218 bits (110), Expect = 2e-53
 Identities = 223/260 (85%), Gaps = 5/260 (1%)
 Strand = Plus / Plus

                                                                            
Query: 363      cccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnntgcacg 422
                ||||||||| ||||||| ||||||||||||||||| ||   | ||||||| |  ||||  
Sbjct: 12614616 cccaccttagtgccatggccaaggttcaatacatgcccactattaccagctttctgca-- 12614673

                                                                            
Query: 423      gtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggtccacg 482
                ||||   ||||||| ||| ||||||||||||| || ||||||||||| |||||||| || 
Sbjct: 12614674 gtgtgaaaaatccggttgcttatgaactctttggacccaaaaagaacgccagggtcaaca 12614733

                                                                            
Query: 483      ttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaactgtc 542
                ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||| |||
Sbjct: 12614734 ttcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaaccgtc 12614793

                                                                            
Query: 543      cagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccaccagat 602
                |   |||| ||||||||||||||||| ||||| ||| |||| ||||||| ||||||||||
Sbjct: 12614794 c---ccaagctaacaacatcaacacctgtcaatggaagcctctccagcagtccaccagat 12614850

                                    
Query: 603      ccgcttgcatataatatcag 622
                || |||||||||||||||||
Sbjct: 12614851 ccacttgcatataatatcag 12614870



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                            
Query: 183      aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
                |||||||||| || |||||||  ||| ||||||||||  |||||||||||||||||||||
Sbjct: 12503690 aaaagatgtgctcttcaggtattctacgctagacatg--gcttcctgcatctatcctcaa 12503633

                                          
Query: 243      gcagtggcatctacaacttctgccgg 268
                ||||  | ||||||||||||||||||
Sbjct: 12503632 gcagcagaatctacaacttctgccgg 12503607



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 68       tatacatggtataaacaagtaggcactttcttacacctcaa 108
                ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 12614367 tatacttgatataaacaagtaggcactttcttacacctcaa 12614407



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 68       tatacatggtataaacaagtaggcactttcttacacctcaa 108
                ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 12503791 tatacttgctataaacaagtaggaactttcttacacctcaa 12503751



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/86 (83%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                            
Query: 183      aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
                |||||||||| || |||||||  ||| |||||| |||  ||||||| |||||||||||||
Sbjct: 12614469 aaaagatgtgctcttcaggtattctacgctagatatg--gcttccttcatctatcctcaa 12614526

                                          
Query: 243      gcagtggcatctacaacttctgccgg 268
                ||||  | |||||| |||| ||||||
Sbjct: 12614527 gcagcagaatctactacttttgccgg 12614552



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 298      aggtctttcagtatctgatcccttttgc 325
                |||| |||||||||||||||||||||||
Sbjct: 12614589 aggtgtttcagtatctgatcccttttgc 12614616
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>dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H03, full
            insert sequence
          Length = 1596

 Score =  365 bits (184), Expect = 1e-97
 Identities = 289/325 (88%)
 Strand = Plus / Minus

                                                                        
Query: 298  aggtctttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgg 357
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1260 aggtatttcagtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcag 1201

                                                                        
Query: 358  gagtccccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnnt 417
            |||| || |||||||||||||||||||||||||||||||| ||   | ||||||| |  |
Sbjct: 1200 gagtgcctaccttaatgccatgaccaaggttcaatacatgcccactattaccagctttct 1141

                                                                        
Query: 418  gcacggtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggt 477
            |||| |||||  ||||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 1140 gcacagtgtcaaaaatccgcttgcttatgaactcttttgacccaaaaagaacgccagggt 1081

                                                                        
Query: 478  ccacgttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaa 537
            | || |||||| |||| |||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 1080 caacattccctcgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaa 1021

                                                                        
Query: 538  ctgtccagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccac 597
            | ||||||||||| ||||||||||||||||| ||||  ||| |||| ||||||| |||||
Sbjct: 1020 ccgtccagtccaagctaacaacatcaacacctgtcagtggaagcctctccagcagtccac 961

                                     
Query: 598  cagatccgcttgcatataatatcag 622
            ||||||| |||||||||| ||||||
Sbjct: 960  cagatccacttgcatatagtatcag 936



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                        
Query: 183  aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
            |||||||||| || |||||||  ||| ||||||||||  |||||||||||||||||||||
Sbjct: 1380 aaaagatgtgctcttcaggtattctacgctagacatg--gcttcctgcatctatcctcaa 1323

                                      
Query: 243  gcagtggcatctacaacttctgccgg 268
            ||||  | ||||||||||||||||||
Sbjct: 1322 gcagcagaatctacaacttctgccgg 1297



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 68   tatacatggtataaacaagtaggcactttcttacacctcaa 108
            ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1481 tatacttgctataaacaagtaggaactttcttacacctcaa 1441
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>gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (les22) mRNA, complete cds
          Length = 1663

 Score =  303 bits (153), Expect = 4e-79
 Identities = 264/302 (87%)
 Strand = Plus / Minus

                                                                        
Query: 309  tatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgggagtccccacc 368
            ||||||||||||||||| |||||||| || || |||||||||||||| ||||| || |||
Sbjct: 1313 tatctgatcccttttgcgacctcaaaaaagtgagcaacattttcctccggagttccaacc 1254

                                                                        
Query: 369  ttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnntgcacggtgtcg 428
            || |||||||| ||||||||||||||||||||   | | |||||||  ||||| ||||||
Sbjct: 1253 ttgatgccatggccaaggttcaatacatgtccaacattgccagccttctgcacagtgtcg 1194

                                                                        
Query: 429  taaatccgcttggttatgaactctttcgatccaaaaagaacaccagggtccacgttccct 488
            ||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1193 taaatccgcctcgttataaactctttggatccaaaaagaacaccagggtccacgttccct 1134

                                                                        
Query: 489  tgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaactgtccagtcc 548
            || |||||| |||| |||||||||| |||||| ||||| |||||||| || |||||||||
Sbjct: 1133 tggactgctgtgttagatcccaatcttttcctgccctctgccatatcgaccgtccagtcc 1074

                                                                        
Query: 549  aaactaacaacatcaacacccgtcaacggangcctttccagcaatccaccagatccgctt 608
            || || |||||||||||||| ||||| ||| |||| |||||||| || |||||||| |||
Sbjct: 1073 aagctgacaacatcaacacctgtcaaaggaagcctctccagcaagcccccagatccactt 1014

              
Query: 609  gc 610
            ||
Sbjct: 1013 gc 1012
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>gb|AY111127.1| Zea mays CL1743_1 mRNA sequence
          Length = 1602

 Score =  262 bits (132), Expect = 1e-66
 Identities = 244/284 (85%)
 Strand = Plus / Minus

                                                                        
Query: 309  tatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgggagtccccacc 368
            ||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| || |||
Sbjct: 1313 tatctgatcccttttgcgacctcgaagaagtgagcaacattttcctccggagttccaacc 1254

                                                                        
Query: 369  ttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnntgcacggtgtcg 428
            || |||||||| ||||||||||||||||||||   | | |||||||  ||||| ||||||
Sbjct: 1253 ttgatgccatggccaaggttcaatacatgtccaacattgccagccttctgcacagtgtcg 1194

                                                                        
Query: 429  taaatccgcttggttatgaactctttcgatccaaaaagaacaccagggtccacgttccct 488
            ||||||||| | ||||| |||||||| |||||     |||||||||||||||||||||||
Sbjct: 1193 taaatccgcctcgttataaactctttggatccnnnnngaacaccagggtccacgttccct 1134

                                                                        
Query: 489  tgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaactgtccagtcc 548
            || |||||| |||| |||||||||| |||||| ||||| |||||||| || |||||||||
Sbjct: 1133 tggactgctgtgttagatcccaatcttttcctgccctctgccatatcgaccgtccagtcc 1074

                                                        
Query: 549  aaactaacaacatcaacacccgtcaacggangcctttccagcaa 592
            || || |||||||||||||| ||||| ||| |||| ||||||||
Sbjct: 1073 aagctgacaacatcaacacctgtcaaaggaagcctctccagcaa 1030
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>gb|AF119232.1|AF119232 Oryza sativa uroporphyrinogen decarboxylase UROD-like mRNA sequence
          Length = 970

 Score =  248 bits (125), Expect = 2e-62
 Identities = 212/242 (87%)
 Strand = Plus / Minus

                                                                       
Query: 381 ccaaggttcaatacatgtccttgactaccagcctnntgcacggtgtcgtaaatccgcttg 440
           ||||||||||||||||||||   | ||||||| |  ||||| |||||  |||||||||||
Sbjct: 968 ccaaggttcaatacatgtccactattaccagctttctgcacagtgtcaaaaatccgcttg 909

                                                                       
Query: 441 gttatgaactctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatg 500
            ||||||||||||| || ||||||||||| |||||||| || ||||||||||| ||||||
Sbjct: 908 cttatgaactcttttgacccaaaaagaacgccagggtcaacattcccttgaaccgctatg 849

                                                                       
Query: 501 ttggatcccaatcgtttcctaccctcagccatatcaactgtccagtccaaactaacaaca 560
           || |||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 848 ttagatcccaatcttttcctcccctcagccatatcaaccgtccagtccaagctaacaaca 789

                                                                       
Query: 561 tcaacacccgtcaacggangcctttccagcaatccaccagatccgcttgcatataatatc 620
           |||||||| ||||  ||| |||| ||||||| |||||||||||| |||||||||| ||||
Sbjct: 788 tcaacacctgtcagtggaagcctctccagcagtccaccagatccacttgcatatagtatc 729

             
Query: 621 ag 622
           ||
Sbjct: 728 ag 727
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score =  218 bits (110), Expect = 2e-53
 Identities = 223/260 (85%), Gaps = 5/260 (1%)
 Strand = Plus / Minus

                                                                         
Query: 363   cccaccttaatgccatgaccaaggttcaatacatgtccttgactaccagcctnntgcacg 422
             ||||||||| ||||||| ||||||||||||||||| ||   | ||||||| |  ||||  
Sbjct: 59136 cccaccttagtgccatggccaaggttcaatacatgcccactattaccagctttctgca-- 59079

                                                                         
Query: 423   gtgtcgtaaatccgcttggttatgaactctttcgatccaaaaagaacaccagggtccacg 482
             ||||   ||||||| ||| ||||||||||||| || ||||||||||| |||||||| || 
Sbjct: 59078 gtgtgaaaaatccggttgcttatgaactctttggacccaaaaagaacgccagggtcaaca 59019

                                                                         
Query: 483   ttcccttgaactgctatgttggatcccaatcgtttcctaccctcagccatatcaactgtc 542
             ||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||| |||
Sbjct: 59018 ttcccttgaaccgctatgttagatcccaatcttttcctcccctcagccatatcaaccgtc 58959

                                                                         
Query: 543   cagtccaaactaacaacatcaacacccgtcaacggangcctttccagcaatccaccagat 602
             |   |||| ||||||||||||||||| ||||| ||| |||| ||||||| ||||||||||
Sbjct: 58958 c---ccaagctaacaacatcaacacctgtcaatggaagcctctccagcagtccaccagat 58902

                                 
Query: 603   ccgcttgcatataatatcag 622
             || |||||||||||||||||
Sbjct: 58901 ccacttgcatataatatcag 58882



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 68    tatacatggtataaacaagtaggcactttcttacacctcaa 108
             ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 59385 tatacttgatataaacaagtaggcactttcttacacctcaa 59345



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/86 (83%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                         
Query: 183   aaaagatgtgttcgtcaggtaccctatgctagacatgtggcttcctgcatctatcctcaa 242
             |||||||||| || |||||||  ||| |||||| |||  ||||||| |||||||||||||
Sbjct: 59283 aaaagatgtgctcttcaggtattctacgctagatatg--gcttccttcatctatcctcaa 59226

                                       
Query: 243   gcagtggcatctacaacttctgccgg 268
             ||||  | |||||| |||| ||||||
Sbjct: 59225 gcagcagaatctactacttttgccgg 59200



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 298   aggtctttcagtatctgatcccttttgc 325
             |||| |||||||||||||||||||||||
Sbjct: 59163 aggtgtttcagtatctgatcccttttgc 59136
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>emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarboxylase
          Length = 1477

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 130/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgttggatccc 509
            ||||| || |||||||| |||||||| ||||| || ||||| |  || |  ||||  |||
Sbjct: 1054 tcttttgagccaaaaaggacaccaggatccacattaccttgtatggcaacattggggccc 995

                                                                        
Query: 510  aatcgtttcctaccctcagccatatcaactgtccagtccaaactaacaacatcaacaccc 569
            | |||| |||| || |||||||||||||||||||| ||||| || || ||||| ||||| 
Sbjct: 994  agtcgtctccttccatcagccatatcaactgtccaatccaagcttactacatccacacct 935

                                                     
Query: 570  gtcaacggangcctttccagcaatccaccagatccgcttgc 610
            ||||| ||| | || || ||||| ||||||||||| |||||
Sbjct: 934  gtcaagggaagtctctcaagcaagccaccagatccacttgc 894



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 318  ccttttgcaacctcaaagaaatgggcaacattttcctcgggagtccccaccttaatgcca 377
            ||||| |||| |||||| || || |||| ||||||||| || || || ||||| ||||||
Sbjct: 1186 cctttagcaatctcaaaaaagtgagcaaaattttcctccggggtgcctaccttgatgcca 1127

                          
Query: 378  tgaccaaggttcaa 391
            || |||||||||||
Sbjct: 1126 tgtccaaggttcaa 1113
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>gb|BT013117.1| Lycopersicon esculentum clone 114407R, mRNA sequence
          Length = 1844

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccttttgcaacctcaaagaaatgggcaacattttcctcgggagtccccaccttaatgcca 377
           ||||| |||||||||||||| || |||||||||||||| || || || || || ||||||
Sbjct: 135 cctttagcaacctcaaagaagtgagcaacattttcctcaggtgtacctactttgatgcca 76

                         
Query: 378 tgaccaaggttcaa 391
           || |||||||||||
Sbjct: 75  tgtccaaggttcaa 62
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>gb|AC151725.26| Medicago truncatula clone mth2-164l16, complete sequence
          Length = 115069

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                       
Query: 449 ctctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgttggatcc 508
           ||||||||||||||| ||||||||||| || || || ||||| |  ||||  || | |||
Sbjct: 572 ctctttcgatccaaacagaacaccaggatcaacattaccttggatagctacatttggtcc 513

                                                                       
Query: 509 caatcgtttcctaccctcagccatatcaactgtccagtccaaactaacaacatcaacacc 568
            ||||   | ||||| ||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 512 taatctccttctaccgtcagccatatcgactgtccaatccaagctaacaacatccacacc 453

                 
Query: 569 cgtcaa 574
            |||||
Sbjct: 452 ggtcaa 447



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 307 agtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgggagtcccca 366
           ||||| |||| ||||| ||||||||||| ||||| || ||||| ||||| ||||| || |
Sbjct: 714 agtatttgattcctttggcaacctcaaaaaaatgtgctacattctcctcaggagtaccta 655

                                 
Query: 367 ccttaatgccatgaccaaggtt 388
           |   |||||| |||||||||||
Sbjct: 654 ctacaatgccgtgaccaaggtt 633
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>gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete sequence
          Length = 120151

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                         
Query: 449   ctctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgttggatcc 508
             ||||||||||||||| ||||||||||| || || || ||||| |  ||||  || | |||
Sbjct: 27039 ctctttcgatccaaacagaacaccaggatcaacattaccttggatagctacatttggtcc 27098

                                                                         
Query: 509   caatcgtttcctaccctcagccatatcaactgtccagtccaaactaacaacatcaacacc 568
              ||||   | ||||| ||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 27099 taatctccttctaccgtcagccatatcgactgtccaatccaagctaacaacatccacacc 27158

                   
Query: 569   cgtcaa 574
              |||||
Sbjct: 27159 ggtcaa 27164



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                         
Query: 307   agtatctgatcccttttgcaacctcaaagaaatgggcaacattttcctcgggagtcccca 366
             ||||| |||| ||||| ||||||||||| ||||| || ||||| ||||| ||||| || |
Sbjct: 26897 agtatttgattcctttggcaacctcaaaaaaatgtgctacattctcctcaggagtaccta 26956

                                   
Query: 367   ccttaatgccatgaccaaggtt 388
             |   |||||| |||||||||||
Sbjct: 26957 ctacaatgccgtgaccaaggtt 26978
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>ref|NM_129611.3| Arabidopsis thaliana uroporphyrinogen decarboxylase AT2G40490 mRNA,
            complete cds
          Length = 1473

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1139 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1088
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>gb|AY142634.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase
            (At2g40490) mRNA, complete cds
          Length = 1216

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1040 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 989
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>gb|AY035057.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase
            (At2g40490) mRNA, complete cds
          Length = 1470

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1126 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1075
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>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete
             sequence
          Length = 84675

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 450   tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
             |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 48417 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 48468
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>emb|BX820790.1|CNS0AA7W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH69ZB05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1369

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1125 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1074
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>emb|BX820062.1|CNS0AA6S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS6ZC09 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1433

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1143 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1092
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>emb|BX819829.1|CNS0AA6W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS33ZA06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1109 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1058
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>emb|BX819769.1|CNS0AA6J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS25ZC09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1428

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 450  tctttcgatccaaaaagaacaccagggtccacgttcccttgaactgctatgt 501
            |||||||||||||| ||||| || || || ||||| ||||||||||||||||
Sbjct: 1126 tctttcgatccaaatagaactcccggatcaacgtttccttgaactgctatgt 1075
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 269      ctgggagaaaggaacaaattcaaca 293
                |||||||||||||||||||||||||
Sbjct: 15442317 ctgggagaaaggaacaaattcaaca 15442341
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1790_D02
          Length = 162928

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 269    ctgggagaaaggaacaaattcaaca 293
              |||||||||||||||||||||||||
Sbjct: 127893 ctgggagaaaggaacaaattcaaca 127917
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 523     cctcagccatatcaactgtccagtcca 549
               |||| ||||||||||||||||||||||
Sbjct: 4083440 cctccgccatatcaactgtccagtcca 4083466
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>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 178502

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 303    tttcagtatctgatcccttttg 324
              ||||||||||||||||||||||
Sbjct: 148186 tttcagtatctgatcccttttg 148165
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>emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 in linkage group 15,
              complete sequence
          Length = 151595

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 8      tttcttcatacaaatacaaatcgatattct 37
              |||||||||||| |||||||| ||||||||
Sbjct: 114371 tttcttcatacacatacaaatggatattct 114342
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>gb|AC158651.12| Mus musculus  BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 190089

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 303   tttcagtatctgatcccttttg 324
             ||||||||||||||||||||||
Sbjct: 49108 tttcagtatctgatcccttttg 49087
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>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete
              sequence
          Length = 201304

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 141    aatgaaatggaaactgaaatgc 162
              ||||||||||||||||||||||
Sbjct: 114638 aatgaaatggaaactgaaatgc 114617
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>gb|AC120359.8| Mus musculus chromosome 5, clone RP24-285E7, complete sequence
          Length = 141594

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 102    acctcaattagtatatgcaatatat 126
              ||||||||| |||||||||||||||
Sbjct: 137819 acctcaatttgtatatgcaatatat 137795
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>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence
          Length = 192261

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 102    acctcaattagtatatgcaatatat 126
              ||||||||| |||||||||||||||
Sbjct: 129039 acctcaatttgtatatgcaatatat 129063
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>gb|AC124736.3| Mus musculus BAC clone RP23-318J20 from chromosome 15, complete sequence
          Length = 201803

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    tagtatatgcaatatatgctt 130
              |||||||||||||||||||||
Sbjct: 152845 tagtatatgcaatatatgctt 152825
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>gb|AC117417.5| Homo sapiens 3 BAC RP11-8L15 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 4004

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 274  agaaaggaacaaattcaacaa 294
            |||||||||||||||||||||
Sbjct: 1331 agaaaggaacaaattcaacaa 1351
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>gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete sequence
          Length = 130801

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   aatgaaatggaaactgaaatg 161
             |||||||||||||||||||||
Sbjct: 43248 aatgaaatggaaactgaaatg 43268
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>gb|AC117435.4| Homo sapiens 3 BAC RP11-71I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 56270

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 139   acaatgaaatggaaactgaaa 159
             |||||||||||||||||||||
Sbjct: 20444 acaatgaaatggaaactgaaa 20424
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>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence
          Length = 216172

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 274 agaaaggaacaaattcaacaa 294
           |||||||||||||||||||||
Sbjct: 675 agaaaggaacaaattcaacaa 655
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>gb|AY525783.1| Raja porosa mitochondrion, complete genome
          Length = 16972

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 332 aaagaaatgggcaacattttc 352
           |||||||||||||||||||||
Sbjct: 795 aaagaaatgggcaacattttc 815
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>gb|AC166362.5| Mus musculus BAC clone RP23-299O17 from chromosome 5, complete sequence
          Length = 188276

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    aacctcaaagaaatgggcaa 345
              ||||||||||||||||||||
Sbjct: 187985 aacctcaaagaaatgggcaa 188004
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>ref|NM_001034850.1| Homo sapiens hypothetical protein FLJ20152 (FLJ20152), transcript
            variant 1, mRNA
          Length = 3259

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  acataagcaatcacaaaaag 187
            ||||||||||||||||||||
Sbjct: 3018 acataagcaatcacaaaaag 2999
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>ref|NM_019000.3| Homo sapiens hypothetical protein FLJ20152 (FLJ20152), transcript
            variant 2, mRNA
          Length = 3108

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  acataagcaatcacaaaaag 187
            ||||||||||||||||||||
Sbjct: 2867 acataagcaatcacaaaaag 2848
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>gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, complete sequence
          Length = 164940

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   aaagaaatgggcaacatttt 351
             ||||||||||||||||||||
Sbjct: 84618 aaagaaatgggcaacatttt 84637
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>gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*010102 allele, and MHC class II antigen
             (HLA-DRB1) gene, complete cds
          Length = 143390

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   aaagaaatgggcaacatttt 351
             ||||||||||||||||||||
Sbjct: 62633 aaagaaatgggcaacatttt 62652
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>gb|AC127265.4| Mus musculus BAC clone RP24-341O20 from chromosome 8, complete sequence
          Length = 176580

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gggagaaaggaacaaattca 290
             ||||||||||||||||||||
Sbjct: 54953 gggagaaaggaacaaattca 54972
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>gb|AC122476.4| Mus musculus BAC clone RP24-334L2 from chromosome 18, complete sequence
          Length = 200538

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   aaagaaatgggcaacatttt 351
             ||||||||||||||||||||
Sbjct: 10360 aaagaaatgggcaacatttt 10341
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>gb|AC141430.3| Mus musculus BAC clone RP23-95O14 from chromosome 5, complete sequence
          Length = 208771

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   aacctcaaagaaatgggcaa 345
             ||||||||||||||||||||
Sbjct: 67876 aacctcaaagaaatgggcaa 67895
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>gb|AC129201.3| Mus musculus BAC clone RP24-224A15 from chromosome 5, complete sequence
          Length = 147253

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   aacctcaaagaaatgggcaa 345
             ||||||||||||||||||||
Sbjct: 81596 aacctcaaagaaatgggcaa 81577
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>gb|BC030517.1| Homo sapiens hypothetical protein FLJ20152, mRNA (cDNA clone
           IMAGE:5165560), complete cds
          Length = 1139

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 acataagcaatcacaaaaag 187
           ||||||||||||||||||||
Sbjct: 837 acataagcaatcacaaaaag 818
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>gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome 6, complete sequence
          Length = 197408

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 144    gaaatggaaactgaaatgcagaacacat 171
              ||||| ||||||||||| ||||||||||
Sbjct: 176171 gaaatagaaactgaaatacagaacacat 176144
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>emb|AL832438.1|HSM803746 Homo sapiens mRNA; cDNA DKFZp762C144 (from clone DKFZp762C144)
          Length = 3037

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  acataagcaatcacaaaaag 187
            ||||||||||||||||||||
Sbjct: 2744 acataagcaatcacaaaaag 2725
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>gb|AC109458.3| Homo sapiens chromosome 5 clone RP11-257I8, complete sequence
          Length = 162191

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tttcttcatacaaatacaaa 27
             ||||||||||||||||||||
Sbjct: 77694 tttcttcatacaaatacaaa 77713
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>gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, complete sequence
          Length = 175177

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    acataagcaatcacaaaaag 187
              ||||||||||||||||||||
Sbjct: 172278 acataagcaatcacaaaaag 172297
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>gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, complete sequence
          Length = 188570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    acataagcaatcacaaaaag 187
              ||||||||||||||||||||
Sbjct: 152962 acataagcaatcacaaaaag 152943
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>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete
              sequence
          Length = 182200

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    acataagcaatcacaaaaag 187
              ||||||||||||||||||||
Sbjct: 108318 acataagcaatcacaaaaag 108299
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>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1,
             complete sequence
          Length = 210511

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atgaaatggaaactgaaatg 161
             ||||||||||||||||||||
Sbjct: 26117 atgaaatggaaactgaaatg 26098
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>gb|AC155809.3| Mus musculus BAC clone RP24-249H19 from chromosome 8, complete sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gggagaaaggaacaaattca 290
             ||||||||||||||||||||
Sbjct: 91221 gggagaaaggaacaaattca 91240
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>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 365    caccttaatgccatgaccaaggtt 388
              ||||||||||| ||||||||||||
Sbjct: 150421 caccttaatgcaatgaccaaggtt 150398
to top
>dbj|AK000159.1| Homo sapiens cDNA FLJ20152 fis, clone COL08515
          Length = 2203

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  acataagcaatcacaaaaag 187
            ||||||||||||||||||||
Sbjct: 1987 acataagcaatcacaaaaag 1968
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>dbj|AK024920.1| Homo sapiens cDNA: FLJ21267 fis, clone COL01717
          Length = 2989

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  acataagcaatcacaaaaag 187
            ||||||||||||||||||||
Sbjct: 2774 acataagcaatcacaaaaag 2755
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>emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J21 on chromosome 20, complete
            sequence
          Length = 108458

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  aagaaatgggcaacattttc 352
            ||||||||||||||||||||
Sbjct: 1325 aagaaatgggcaacattttc 1306
to top
>emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in linkage group 5,
             complete sequence
          Length = 230400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   aaactaacaacatcaacacc 568
             ||||||||||||||||||||
Sbjct: 72045 aaactaacaacatcaacacc 72064
to top
>gb|AY708134.1| Philautus charius isolate 081.PchaND1 NADH dehydrogenase 1 (ND1)
           gene, partial sequence; tRNA-Ile and tRNA-Gln genes,
           complete sequence; and tRNA-Met gene, partial sequence;
           mitochondrial
          Length = 498

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  taggtggataagattgaagt 61
           ||||||||||||||||||||
Sbjct: 192 taggtggataagattgaagt 173
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>gb|AC175115.1| Mus musculus BAC clone RP23-395E24 from chromosome 5, complete sequence
          Length = 202831

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   aacctcaaagaaatgggcaa 345
             ||||||||||||||||||||
Sbjct: 27292 aacctcaaagaaatgggcaa 27311
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>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
             sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   agcaatcacaaaaagatgtg 192
             ||||||||||||||||||||
Sbjct: 66782 agcaatcacaaaaagatgtg 66763
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>gb|AC138119.5| Mus musculus BAC clone RP23-307D8 from chromosome 5, complete sequence
          Length = 196908

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   aacctcaaagaaatgggcaa 345
             ||||||||||||||||||||
Sbjct: 95183 aacctcaaagaaatgggcaa 95164
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>gb|AC145974.4| Gallus gallus BAC clone CH261-3L16 from chromosome unknown, complete
             sequence
          Length = 201188

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 281   aacaaattcaacaaccaaggtctt 304
             |||||||||| |||||||||||||
Sbjct: 37378 aacaaattcagcaaccaaggtctt 37401
to top
>gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, complete sequence
          Length = 186601

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    cagtggcatctacaacttct 263
              ||||||||||||||||||||
Sbjct: 104428 cagtggcatctacaacttct 104447
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>emb|AL831712.12| Mouse DNA sequence from clone RP23-118A20 on chromosome 4, complete
              sequence
          Length = 210976

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    tggcatctacaacttctgcc 266
              ||||||||||||||||||||
Sbjct: 176794 tggcatctacaacttctgcc 176813
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>emb|CT009618.10| Zebrafish DNA sequence from clone CH73-147E18 in linkage group 5,
             complete sequence
          Length = 71914

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   aaactaacaacatcaacacc 568
             ||||||||||||||||||||
Sbjct: 67408 aaactaacaacatcaacacc 67427
to top
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148,
             complete sequence
          Length = 106000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   aattcaacaaccaaggtctt 304
             ||||||||||||||||||||
Sbjct: 93829 aattcaacaaccaaggtctt 93848
to top
>dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT04F23, TM0044a,
             complete sequence
          Length = 65620

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   aattcaacaaccaaggtctt 304
             ||||||||||||||||||||
Sbjct: 62329 aattcaacaaccaaggtctt 62310
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>emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chromosome X, complete
              sequence
          Length = 210533

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    gctgggagaaaggaacaaat 287
              ||||||||||||||||||||
Sbjct: 121356 gctgggagaaaggaacaaat 121375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,570,336
Number of Sequences: 3902068
Number of extensions: 5570336
Number of successful extensions: 110636
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110329
Number of HSP's gapped (non-prelim): 297
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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