ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37g23 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 364 bits (935), Expect = e-100 Identities = 174/182 (95%), Positives = 178/182 (97%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT Sbjct: 206 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 265 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 VARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVVK DYL Sbjct: 266 VARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYL 325 Query: 328 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGK 149 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQRF+GK Sbjct: 326 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGK 385 Query: 148 LK 143 LK Sbjct: 386 LK 387
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 344 bits (883), Expect = 1e-94 Identities = 159/180 (88%), Positives = 172/180 (95%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT Sbjct: 206 PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 265 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 VARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+VK DYL Sbjct: 266 VARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYL 325 Query: 328 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGK 149 MIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF+D +S GHGRFQT+ EK +FYG+ Sbjct: 326 MIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 385
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 338 bits (867), Expect = 9e-93 Identities = 158/181 (87%), Positives = 171/181 (94%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT Sbjct: 206 PIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 265 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 VARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+VK DYL Sbjct: 266 VARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYL 325 Query: 328 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGK 149 MIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK RFY + Sbjct: 326 MIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNR 385 Query: 148 L 146 + Sbjct: 386 V 386
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 265 bits (678), Expect = 8e-71 Identities = 121/185 (65%), Positives = 151/185 (81%), Gaps = 3/185 (1%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+D+VF +DEMID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV +T Sbjct: 205 PVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFT 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 338 VARAGQ GYHHRTE+NKK+Y++GK + + T++D TEK + PMGGFPHYG+V Sbjct: 265 VARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQ 324 Query: 337 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRF 158 D++MI+GCCVG KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT EK+ F Sbjct: 325 DFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAF 384 Query: 157 YGKLK 143 GKLK Sbjct: 385 MGKLK 389
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 265 bits (677), Expect = 1e-70 Identities = 127/188 (67%), Positives = 150/188 (79%), Gaps = 7/188 (3%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RVS TV Sbjct: 206 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 265 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGV 347 ARAGQ GYHHRTE+NKK+Y+IG G T D ASTE+D T+K ITPMGGFPHYG Sbjct: 266 ARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++MIKGCC+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRFQT +K Sbjct: 325 VNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADK 384 Query: 166 QRFYGKLK 143 F G LK Sbjct: 385 LAFMGPLK 392
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 262 bits (670), Expect = 6e-70 Identities = 126/188 (67%), Positives = 155/188 (82%), Gaps = 6/188 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV++T Sbjct: 205 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFT 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG Sbjct: 265 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK Sbjct: 325 VTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEK 384 Query: 166 QRFYGKLK 143 + F G LK Sbjct: 385 KAFMGPLK 392
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 261 bits (666), Expect = 2e-69 Identities = 125/188 (66%), Positives = 155/188 (82%), Gaps = 6/188 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++ Sbjct: 205 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG Sbjct: 265 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK Sbjct: 325 VTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEK 384 Query: 166 QRFYGKLK 143 + F G LK Sbjct: 385 KAFMGPLK 392
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 260 bits (665), Expect = 2e-69 Identities = 125/188 (66%), Positives = 155/188 (82%), Gaps = 6/188 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++ Sbjct: 205 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG Sbjct: 265 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK Sbjct: 325 VTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEK 384 Query: 166 QRFYGKLK 143 + F G LK Sbjct: 385 KAFMGPLK 392
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 260 bits (665), Expect = 2e-69 Identities = 125/188 (66%), Positives = 154/188 (81%), Gaps = 6/188 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++ Sbjct: 205 PVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG Sbjct: 265 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK Sbjct: 325 VTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEK 384 Query: 166 QRFYGKLK 143 + F G LK Sbjct: 385 KAFMGPLK 392
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 256 bits (655), Expect = 4e-68 Identities = 123/181 (67%), Positives = 146/181 (80%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 206 VDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTV 265 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQNGYHHRT +N KVY+IGK G E +A+TEFDRT+K ITPMGGF HYG V D++M Sbjct: 266 ARAGQNGYHHRTSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAVNNDFVM 324 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G L Sbjct: 325 VKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTL 384 Query: 145 K 143 K Sbjct: 385 K 385
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 255 bits (651), Expect = 1e-67 Identities = 124/188 (65%), Positives = 154/188 (81%), Gaps = 6/188 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA HPARV+++ Sbjct: 205 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG Sbjct: 265 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 324 Query: 346 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 167 V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK Sbjct: 325 VTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEK 384 Query: 166 QRFYGKLK 143 + F G LK Sbjct: 385 KAFMGPLK 392
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 254 bits (649), Expect = 2e-67 Identities = 117/184 (63%), Positives = 150/184 (81%), Gaps = 3/184 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D VF +DEMID IGVT+G G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV++TV Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266 Query: 505 ARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 335 ARAGQ G+HHRT +N K+Y+IGK + ++ STEFD T+K ITPMGGFP YG+V D Sbjct: 267 ARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQD 326 Query: 334 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 155 Y+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ F Sbjct: 327 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 386 Query: 154 GKLK 143 GKLK Sbjct: 387 GKLK 390
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 253 bits (645), Expect = 5e-67 Identities = 117/184 (63%), Positives = 149/184 (80%), Gaps = 3/184 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D VF +DEMID IGVTKG G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV++TV Sbjct: 207 VDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266 Query: 505 ARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 335 ARAGQ G+HHRT +N K+Y+IGK + ++ STEFD T+K I PMGGFP YG+V D Sbjct: 267 ARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQD 326 Query: 334 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 155 Y+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ F Sbjct: 327 YVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 386 Query: 154 GKLK 143 GKLK Sbjct: 387 GKLK 390
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 250 bits (639), Expect = 3e-66 Identities = 115/185 (62%), Positives = 145/185 (78%), Gaps = 4/185 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 + VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV Sbjct: 207 VTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTV 266 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPHYGVVKA 338 RAGQ GYHHR E NKK+Y+IG+ G++ TEFD TEK I PMGGF HYG+VK Sbjct: 267 PRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKH 326 Query: 337 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRF 158 ++LM+KGC GP+KR +TLR+S+ QT R ALE+I LKF+DTSSKFGHG QT ++K ++ Sbjct: 327 EFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKY 386 Query: 157 YGKLK 143 +G K Sbjct: 387 FGVKK 391
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 249 bits (637), Expect = 4e-66 Identities = 117/181 (64%), Positives = 147/181 (81%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TV Sbjct: 206 IDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTV 265 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ GYHHRT N KV++IGK G + +AST+FD ++K ITPMGGF YG VK DY+M Sbjct: 266 ARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G KKRV+TLR++L QTSR A E+++LK++DTSSKFGHG FQT +EK+ F G L Sbjct: 325 VKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTL 384 Query: 145 K 143 K Sbjct: 385 K 385
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 249 bits (635), Expect = 7e-66 Identities = 116/181 (64%), Positives = 145/181 (80%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D+VF+++EMID++ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++V Sbjct: 205 VDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSV 264 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ GYHHRT +N KVY++GK G + +A+TEFDRT+K ITPMGGF HYG + D+++ Sbjct: 265 ARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAINNDFVI 323 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G L Sbjct: 324 LKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTL 383 Query: 145 K 143 K Sbjct: 384 K 384
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 247 bits (631), Expect = 2e-65 Identities = 115/181 (63%), Positives = 143/181 (79%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++V Sbjct: 204 VDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSV 263 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ GYH RT +N K+Y++GK G + + +T FDRT+K ITPMGGF HYG +K D++M Sbjct: 264 ARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 322 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KGC G +KR+VTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G L Sbjct: 323 VKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTL 382 Query: 145 K 143 K Sbjct: 383 K 383
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 247 bits (631), Expect = 2e-65 Identities = 117/189 (61%), Positives = 146/189 (77%), Gaps = 7/189 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+ +VF ++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV + Sbjct: 205 PVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYG 350 +ARAGQ GYHHRTE+NKK+Y+IG+ G D AST +D T+K ITP+GGFPHYG Sbjct: 265 IARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYG 323 Query: 349 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 170 V D++M+KGC G KKRV+TLR+SLL SR ALE I+LKF+DT+SKFGHGRFQT E Sbjct: 324 EVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQE 383 Query: 169 KQRFYGKLK 143 K+ F G K Sbjct: 384 KRAFMGPQK 392
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 246 bits (627), Expect = 6e-65 Identities = 117/181 (64%), Positives = 143/181 (79%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++V Sbjct: 205 VDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSV 264 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ GYHHRT +N K+Y+IGK G + +A+T FDRT+K I PMGGF HYG+V D++M Sbjct: 265 ARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDFVM 323 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G KKRVVTLR+SL TSR A+EE+ LK++DT+SKFG GRFQT EK F G L Sbjct: 324 VKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTL 383 Query: 145 K 143 K Sbjct: 384 K 384
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 245 bits (625), Expect = 1e-64 Identities = 115/181 (63%), Positives = 140/181 (77%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 +D+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 205 VDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTV 264 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQNG+HHRT +N KVY++G G E+ A TEFDRT+K I PMGGF YG VK D+++ Sbjct: 265 ARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDFML 323 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G KKR+VT+R+SL TSR A E + LK++DT+SKFG GRFQT EK F G L Sbjct: 324 LKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTL 383 Query: 145 K 143 K Sbjct: 384 K 384
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 244 bits (622), Expect = 2e-64 Identities = 116/181 (64%), Positives = 142/181 (78%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 204 IKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTV 263 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAG GY HRT++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D++M Sbjct: 264 ARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVM 322 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 + G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G L Sbjct: 323 LNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTL 382 Query: 145 K 143 K Sbjct: 383 K 383
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 244 bits (622), Expect = 2e-64 Identities = 116/181 (64%), Positives = 142/181 (78%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 204 IKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTV 263 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAG GY HRT++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D++M Sbjct: 264 ARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVM 322 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 + G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G L Sbjct: 323 LNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTL 382 Query: 145 K 143 K Sbjct: 383 K 383
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 243 bits (621), Expect = 3e-64 Identities = 115/189 (60%), Positives = 144/189 (76%), Gaps = 7/189 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV + Sbjct: 205 PVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCS 264 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYG 350 +ARAGQ GYHHRTE+NKK+++IG+ G D AST +D T K ITP+GGFPHYG Sbjct: 265 IARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYG 323 Query: 349 VVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDE 170 V D++M+KGC G KKRV+TLR+SLL SR A+E I+LKF+DT+SKFGHGRFQT E Sbjct: 324 EVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQE 383 Query: 169 KQRFYGKLK 143 K+ F G K Sbjct: 384 KRAFMGPQK 392
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 239 bits (611), Expect = 4e-63 Identities = 112/181 (61%), Positives = 142/181 (78%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 ID++F+KDE+ID+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP+ V +TV Sbjct: 206 IDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTV 265 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ GYHHRT +N K+Y+IGK G A+TE D T+K ITPMGGF YG + D++M Sbjct: 266 ARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG G KKRV+TLR+S+ TSR ALE+++LK++DTSS+FGHG FQT EK++F G L Sbjct: 325 VKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTL 384 Query: 145 K 143 K Sbjct: 385 K 385
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 225 bits (574), Expect = 9e-59 Identities = 112/181 (61%), Positives = 139/181 (76%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 I VF +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV Y++ Sbjct: 201 IGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSI 260 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 ARAGQ G+H RTE NK+VY I G + + TEFD TEK I+PMGGFPHYG V+ D++M Sbjct: 261 ARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIM 317 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 146 +KG VG +KRVVTLR+SLL+Q A EE+ +KFVDTSSK GHGRFQT+ EK+ FYG Sbjct: 318 VKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGAR 374 Query: 145 K 143 K Sbjct: 375 K 375
>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)| Length = 130 Score = 168 bits (425), Expect = 2e-41 Identities = 78/128 (60%), Positives = 101/128 (78%), Gaps = 6/128 (4%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +++ Sbjct: 3 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFS 62 Query: 508 VARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGV 347 VARAGQ GYHHRTE+NKK+YKIG K G+ ++ T++D ++K I P+G F HYG Sbjct: 63 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGE 122 Query: 346 VKADYLMI 323 V D++M+ Sbjct: 123 VTNDFVML 130
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 146 bits (368), Expect = 7e-35 Identities = 69/161 (42%), Positives = 103/161 (63%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV Sbjct: 209 VGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTV 268 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 AGQ G+HHRTE+NK++ IG+ G+ D +TE +ITP GGFPHYG+V++D++M Sbjct: 269 PMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRSDFMM 323 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 203 I G G KR++ +R ++ + ++ ++ +V SK Sbjct: 324 IAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 143 bits (361), Expect = 4e-34 Identities = 68/161 (42%), Positives = 101/161 (62%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV Sbjct: 206 VGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTV 265 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 AGQ G+HHRTE+NK++ IG+ G+ D E +ITP GGFPHYG+V++D++M Sbjct: 266 PMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSDFMM 319 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 203 I G G KR++ +R ++ + ++ ++ +V SK Sbjct: 320 IAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 143 bits (360), Expect = 6e-34 Identities = 68/161 (42%), Positives = 100/161 (62%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV Sbjct: 207 VGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTV 266 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 AGQ G+HHRTE+NK++ IG+ G+ D E +ITP GGFPHYG+V+ D++M Sbjct: 267 PMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGDFMM 320 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 203 I G G KR++ +R ++ + ++ ++ +V SK Sbjct: 321 IAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 133 bits (335), Expect = 4e-31 Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 2/160 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVA 503 V + E++D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV Sbjct: 192 VLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVP 251 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 +AGQ G+HHRTE NK++ IG+ G+ D + E +ITP GGFPHYG+V++D+LMI Sbjct: 252 QAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIVRSDFLMI 305 Query: 322 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 203 +G G KR++ +R ++ + +E ++ +V SK Sbjct: 306 EGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 129 bits (324), Expect = 8e-30 Identities = 70/165 (42%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPARVSY 512 I VFQ+ E++D IGVTKGKG++G V RWGV + + +G+ R V IG W P V + Sbjct: 186 ITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMW 245 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 332 +V GQ GYH RTE NK++ KIG G E ITP GGF HYGV++ +Y Sbjct: 246 SVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIRNNY 291 Query: 331 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 +++KG GP KR++ LR+++ Q + + EI ++ T+SK G Sbjct: 292 VVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 126 bits (316), Expect = 7e-29 Identities = 65/138 (47%), Positives = 88/138 (63%), Gaps = 2/138 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVA 503 VF + E++D+ +TKGKG++GVV RWGVT RKT R R + IG P+RV +TV Sbjct: 195 VFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVP 254 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 AGQ GYH RTE NK++ KIG+ G+E +TP GGF +YGVV+ DY+MI Sbjct: 255 MAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVVRGDYIMI 300 Query: 322 KGCCVGPKKRVVTLRQSL 269 G GPKKR++ +R ++ Sbjct: 301 HGTVPGPKKRLIRVRPAV 318
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 125 bits (314), Expect = 1e-28 Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 2/165 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSY 512 + VF + +ID+I VTKGKG++G V RWGV L K R R+V +G W+P V + Sbjct: 182 VSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRW 241 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 332 TV +AGQ G+H RTE NK++ KIG+ G+E ITP GGF HYGV++ Y Sbjct: 242 TVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIRTQY 287 Query: 331 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 +++ G GP KR++ +R ++ + + + + + +V T+SK G Sbjct: 288 VLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 120 bits (300), Expect = 5e-27 Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPARVSY 512 I+ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV + Sbjct: 185 INDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMW 244 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 332 TV AGQ G+H RTE NK++ K+G G E ITP GGF +YG VK Y Sbjct: 245 TVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGY 290 Query: 331 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 194 +++KG GP KR+V LR ++ + L E+ ++ SK G+ Sbjct: 291 VVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 119 bits (297), Expect = 1e-26 Identities = 65/135 (48%), Positives = 84/135 (62%), Gaps = 2/135 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVA 503 VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA V +T Sbjct: 194 VFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQP 252 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 R GQ G+H RTE NK++ KIG+ G E ITP GFPHYGVVK Y++I Sbjct: 253 RPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVKGPYILI 298 Query: 322 KGCCVGPKKRVVTLR 278 +G G +KR+V LR Sbjct: 299 QGSVPGARKRLVVLR 313
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 118 bits (295), Expect = 2e-26 Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 2/162 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVA 503 VF+ ++D +T GKG +G V RWG+ + K R LR+V +GA++P+RVS+ V Sbjct: 192 VFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVP 251 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ GYH RTE NK++ KIG G+E +TP GGF +YG+V+ DY++I Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYILI 297 Query: 322 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 KG GP KR++ LR + + + L E + ++ SK G Sbjct: 298 KGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 117 bits (292), Expect = 4e-26 Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 3/163 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVA 503 +F + +D I VTKGKG++G V RWG+ K R R + +G W P+R +TV Sbjct: 189 IFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSRTMWTVP 248 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGVVKADYLM 326 +AGQ GYH RTE NK++ KIG D +E D + P GGF YG+V+ DY+M Sbjct: 249 QAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGLVRNDYVM 295 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 IKG GP KR+V LR+++ + + E ++ ++ T+SK G Sbjct: 296 IKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 114 bits (285), Expect = 3e-25 Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 2/162 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVA 503 VF+ ++D +T GKG +G V RWG+ K R LR++ +G+++P+RVS+ V Sbjct: 192 VFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVP 251 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ GYH RTE NK++ KIG G+E +TP GGF +YG+V+ DY++I Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLI 297 Query: 322 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 KG GP KR++ LR + + + L E + ++ SK G Sbjct: 298 KGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 107 bits (267), Expect = 3e-23 Identities = 60/155 (38%), Positives = 85/155 (54%) Frame = -2 Query: 661 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGY 482 + +D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY Sbjct: 190 KFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGY 249 Query: 481 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 302 RT N +V K K DA T I GGF HYG+VK DY+++ G GP Sbjct: 250 QQRTISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGP 297 Query: 301 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 KR++ +R ++ ++ +KL ++ SK G Sbjct: 298 AKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 105 bits (261), Expect = 2e-22 Identities = 58/155 (37%), Positives = 84/155 (54%) Frame = -2 Query: 661 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGY 482 + +D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ Sbjct: 190 KFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGF 249 Query: 481 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 302 RT N +V K G E D I GGF HYG VK DY+++ G G Sbjct: 250 QQRTISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVKNDYVLLFGSIPGA 297 Query: 301 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 KR++ +R ++ +EE+KL+++ SK G Sbjct: 298 SKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 104 bits (259), Expect = 3e-22 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 2/162 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVA 503 VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV Sbjct: 190 VFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVP 249 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ GYH RTE+NK++ I G E TP GGFP+YG V Y ++ Sbjct: 250 QQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLV 294 Query: 322 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 KG GP++R+V R ++ S E+ ++V T+S G Sbjct: 295 KGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 103 bits (257), Expect = 5e-22 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 2/162 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVA 503 VF++ ++IDIIGVTKGKG++GVV R+GV LPR K +G RKV G + SY V Sbjct: 200 VFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF-STPSY-VP 257 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ GYH RTE NK++ KI +I P GGF +YG+V+ YL+I Sbjct: 258 QPGQMGYHRRTEYNKRILKISD--------------DPNEINPKGGFVNYGIVRNTYLII 303 Query: 322 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 +G +G KKR + LR + + S + K+ +V+ S+ G Sbjct: 304 EGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 102 bits (254), Expect = 1e-21 Identities = 55/152 (36%), Positives = 86/152 (56%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 I+ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ TV Sbjct: 179 INDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTV 238 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 GQ GYH RTE NK + KIG + + GG+ YG V ++ Sbjct: 239 PMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTIL 281 Query: 325 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 230 +KG GP+KR++ LR+++ + +E I+ Sbjct: 282 LKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 102 bits (253), Expect = 1e-21 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVA 503 +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P+RV TV Sbjct: 193 IFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVP 252 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ GYH RTE+NK++ IG+ + T D GGF +YG V Y ++ Sbjct: 253 QQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVDGPYTLV 297 Query: 322 KGCCVGPKKRVVTLRQSL 269 KG GP KR+V R ++ Sbjct: 298 KGSVPGPDKRLVRFRPAV 315
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 100 bits (249), Expect = 4e-21 Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 4/167 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSY 512 ++ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R++ H + Sbjct: 193 VNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRSTFW 250 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 332 +AGQ G+H RTE NK++ I G + +TP GGF YGVV++ + Sbjct: 251 ETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRSTF 296 Query: 331 LMIKGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 197 +M+ G G KR + +R ++ + +L + + ++ ++ +SK G Sbjct: 297 VMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 98.6 bits (244), Expect = 2e-20 Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVA 503 VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G SYT Sbjct: 208 VFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-P 265 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 + GQ G+H RTE NK++ KIG K+I P GGF YG+V+ Y+++ Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVRNTYVLL 311 Query: 322 KGCCVGPKKRVVTLRQ 275 +G +G KKR + LR+ Sbjct: 312 EGSILGSKKRPIFLRE 327
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 95.9 bits (237), Expect = 1e-19 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 2/166 (1%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVS 515 P+ VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G RK+ G + S Sbjct: 195 PVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGP-SISTPS 253 Query: 514 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 335 Y V + GQ G+H RTE NK++ KIG +I P GG +YG+VK Sbjct: 254 Y-VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVKNT 298 Query: 334 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 197 YL+I+G +G +KR + LR + S + K+ +V+ +S+ G Sbjct: 299 YLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342
>RL3_CLOTE (Q890N9) 50S ribosomal protein L3| Length = 209 Score = 51.2 bits (121), Expect = 3e-06 Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 509 +F+ E ID+ G +KGKGY+G++ RW R P K HR + + A +PAR Sbjct: 101 IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASYPARTFKN 158 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 AG G T +N +V K + + + + Sbjct: 159 KRMAGHMGNVKSTVLNLEVVKT-------------------------------IPEKNLI 187 Query: 328 MIKGCCVGPKKRVVTLRQSL 269 +IKG GP K V +R S+ Sbjct: 188 LIKGGIPGPNKGYVIIRNSI 207
>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3| Length = 209 Score = 50.4 bits (119), Expect = 5e-06 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 509 +F E +D+ GV+KGKG++G + RWG R P K HR + + G+ P+R + Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 G G+ + T +N +V K+ + + + + Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV-------------------------------IPEKNLI 187 Query: 328 MIKGCCVGPKKRVVTLRQSL 269 +IKG GP K V ++ S+ Sbjct: 188 LIKGGVPGPNKSFVVIKNSV 207
>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3| Length = 205 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 506 F + +D++G +KGKG++GVV R G + + T H LR +GA +PA+V Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AGQ G T N +V K+ Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180
>RL3_ENTFA (Q839G4) 50S ribosomal protein L3| Length = 209 Score = 47.4 bits (111), Expect = 4e-05 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 1/137 (0%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVAR 500 VFQ +++D+ G TKGKG++G + R G +R P R R+ +G P RV Sbjct: 101 VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKNKRL 160 Query: 499 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 320 AG+ G T N +V K+ V+ + ++IK Sbjct: 161 AGRMGGDRVTIQNLEVVKVD-------------------------------VERNVILIK 189 Query: 319 GCCVGPKKRVVTLRQSL 269 G G KK ++T++ ++ Sbjct: 190 GNIPGAKKSLITIKSAV 206
>RL3_BACST (P28600) 50S ribosomal protein L3| Length = 213 Score = 47.0 bits (110), Expect = 6e-05 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 500 +F + +++D+ G++KGKG++G + R G +R P R R+ +GA P RV T Sbjct: 101 IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNRVFKTKNL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 G+ G T N K+ K+ Sbjct: 161 PGRMGGERVTIQNLKIVKV 179
>RL3_BACTN (Q8A476) 50S ribosomal protein L3| Length = 205 Score = 46.6 bits (109), Expect = 7e-05 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYT 509 +F +D++G +KGKG++GVV R G + + T H RK IGA +PA+V Sbjct: 99 MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 + GQ G T N +V K+ Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180
>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor| Length = 302 Score = 46.6 bits (109), Expect = 7e-05 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = -2 Query: 682 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVS 515 + +F+ +++D+ G + GKG++G + RWG+ R P K+HR + C P+RV Sbjct: 188 EELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--PSRVY 245 Query: 514 YTVARAGQNGYHHRT 470 + AG+ G +T Sbjct: 246 KGLKMAGRMGNERKT 260
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 45.8 bits (107), Expect = 1e-04 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 4/139 (2%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTV 506 F+ + +D+ GV+KGKG++G + RW +R P K HR + A P+R Sbjct: 102 FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDPSRTFKNK 159 Query: 505 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 326 G G + T +N +V KI EK+I ++ Sbjct: 160 RMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------------IL 188 Query: 325 IKGCCVGPKKRVVTLRQSL 269 IKG GP K V +R S+ Sbjct: 189 IKGGIPGPNKGTVVIRNSV 207
>RL3_BIFLO (Q8G417) 50S ribosomal protein L3| Length = 213 Score = 44.7 bits (104), Expect = 3e-04 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 506 +F++ +D+ G TKGKG+ G + RWG R +H+ R+ +GA P+R+ Sbjct: 103 LFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGK 162 Query: 505 ARAGQNGYHHRTEMNKKV 452 AG+ G+ T N V Sbjct: 163 RMAGRMGHVTATTQNLTV 180
>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3| Length = 266 Score = 43.9 bits (102), Expect = 5e-04 Identities = 41/154 (26%), Positives = 66/154 (42%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR 500 ++F E +D+ G++KGKG+ G + R ++ K+H G G P R Sbjct: 97 SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GGGSKPVR------- 142 Query: 499 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 320 Q G NK V + G H+ T E +T VK + L++K Sbjct: 143 --QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVK 190 Query: 319 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 218 G GPKK V +++ K S+ A++ + L+ V Sbjct: 191 GAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224
>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3| Length = 208 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 317 G+ G + T N ++ ++ +++ + +++KG Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188 Query: 316 CCVGPKKRVVTLRQSL 269 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3| Length = 208 Score = 43.5 bits (101), Expect = 6e-04 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G++KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_TROWT (Q83FY6) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 506 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_TROW8 (Q83I78) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 506 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_BACCR (Q81J42) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVAR 500 VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 101 VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 AG+ G T N ++ ++ Sbjct: 161 AGRMGGDQVTIQNLEIVQV 179
>RL3_BACAN (Q81VT0) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVAR 500 VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 101 VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 AG+ G T N ++ ++ Sbjct: 161 AGRMGGDQVTIQNLEIVQV 179
>RL3_THEMA (P38515) 50S ribosomal protein L3| Length = 207 Score = 43.1 bits (100), Expect = 8e-04 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 509 VF+K E +D+ G TKG+G+ G + RWG + P+ K HR L V PA++ Sbjct: 97 VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 G+ G T N +V I Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176
>RL3_SPIKU (P60457) 50S ribosomal protein L3| Length = 258 Score = 43.1 bits (100), Expect = 8e-04 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 500 +F E +D+ G +KGKG+ G + R +R P G R V +GA P R+ + Sbjct: 98 IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157 Query: 499 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 320 G G T N ++ I TEK+ L++K Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186 Query: 319 GCCVGPKKRVVTLRQSL 269 G GPKK+ V +++++ Sbjct: 187 GSIPGPKKQFVVIKEAI 203
>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)| Length = 209 Score = 43.1 bits (100), Expect = 8e-04 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVAR 500 +F E++D+ GV+KGKG++G + R G +R P R R+ +G P RV Sbjct: 101 IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 G+ G T N ++ K+ Sbjct: 161 PGRMGGEQITVQNLEIVKV 179
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 500 VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 101 VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 G+ G T N ++ K+ Sbjct: 161 PGRMGGEQITIQNLEIVKV 179
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 500 VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 101 VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 G+ G T N ++ K+ Sbjct: 161 PGRMGGEQITIQNLEIVKV 179
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 500 VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 101 VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL 160 Query: 499 AGQNGYHHRTEMNKKVYKI 443 G+ G T N ++ K+ Sbjct: 161 PGRMGGEQITIQNLEIVKV 179
>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3| Length = 244 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 539 + VF+ +++D+ G++KG+G+ GV+ RW PR HR R V IG Sbjct: 100 VQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149
>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 515 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 GQ G RT KV++I Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276
>RL3_STRP8 (P60452) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRP3 (P60451) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3| Length = 209 Score = 42.4 bits (98), Expect = 0.001 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Frame = -2 Query: 688 PIDAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPARV 518 P+D VF++ + ++++GVTKGKG+ GVV R G +R ++ R + G+ P+R Sbjct: 98 PVD-VFKEGDKVNVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRT 156 Query: 517 SYTVARAGQNGYHHRTEMNKKVYKI 443 AG+ G ++T N + K+ Sbjct: 157 FKGTRMAGRMGGKNKTVQNLVIVKV 181
>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 515 A F+ + +D+ T GKG++GV+ RWG P KTH R+ + RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 G+ G +RTE KV++I Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276
>RL3_THETN (Q8R7V4) 50S ribosomal protein L3| Length = 210 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WHPARVSY 512 +F+ + +D+ G++KGKG+ GV+ R+G R P K H R+V +GA P R Sbjct: 101 IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTDPGRTFK 157 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 G+ G T N +V K+ Sbjct: 158 GKKMPGRMGSDRVTIQNLEVVKV 180
>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 515 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 G+ G +RT KV+++ Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276
>RL3_STRMU (Q8DS16) 50S ribosomal protein L3| Length = 208 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F+ +++D+ G TKGKG++G + R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 496 GQNGYHHRTEMNKKVYKI 443 G+ G + T N +V ++ Sbjct: 160 GRMGGNRVTVQNLEVVQV 177
>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 347 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 515 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 G+ G +RT KV+++ Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276
>RL3_CORDI (P60453) 50S ribosomal protein L3| Length = 218 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 506 +F+ +D+ G TKGKGY G + R G R+V IGA P RV Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N KV KI Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185
>RL3_AQUAE (O66431) 50S ribosomal protein L3| Length = 241 Score = 41.2 bits (95), Expect = 0.003 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 2/158 (1%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPARVSY 512 ++ VF+ +++D+ G++KG+G+ G + RW P+ HR R V IG P RV Sbjct: 100 VEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGRVWK 159 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 332 G G K + G F + + + Sbjct: 160 GKRMPGHYG-------------------------------AKPVRVQGLFVVDVLPEENA 188 Query: 331 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 218 +++KG G K +V + QS + L++ + +F+ Sbjct: 189 ILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFI 226
>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3| Length = 209 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVA 503 +F+ E ID+ G +KGKG++GV+ R G R P TH R +G P RV Sbjct: 101 IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAMGVIDPMRVFKGKK 159 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 G G T N +V + Sbjct: 160 LPGHMGSEQVTIQNLEVVSV 179
>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 512 I VF +++ + GV+KG+GY+GVV R G P R R +GA P+RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGK 437 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 512 I VF +++ + GV+KG+GY+GVV R G P R R +GA P+RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 511 TVARAGQNGYHHRTEMNKKVYKIGK 437 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3| Length = 208 Score = 40.0 bits (92), Expect = 0.007 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 496 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 317 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 316 CCVGPKKRVVTLRQSL 269 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRPN (Q97SV5) 50S ribosomal protein L3| Length = 208 Score = 40.0 bits (92), Expect = 0.007 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 497 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 496 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 317 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 316 CCVGPKKRVVTLRQSL 269 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_GEOSL (P60454) 50S ribosomal protein L3| Length = 210 Score = 39.7 bits (91), Expect = 0.009 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVA 503 F+ E ID+ G + GKG++GV+ RWG R R +H R IG + +P+RV Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 GQ G T +V ++ Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180
>RL3_MYCCT (P10134) 50S ribosomal protein L3| Length = 223 Score = 39.7 bits (91), Expect = 0.009 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 4/153 (2%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPARV 518 + +F E +D+ G++KGKG+ G + R +R P HRG+ + I R+ Sbjct: 96 VSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----INRI 151 Query: 517 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 338 + G G RT N ++ I + Sbjct: 152 FKSKKMPGHMGNAKRTIQNLEIIAIDQ-------------------------------SN 180 Query: 337 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 239 + ++IKG GPK V ++Q++ +S+ A+E Sbjct: 181 NIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213
>RL3_THETH (P52860) 50S ribosomal protein L3| Length = 206 Score = 39.7 bits (91), Expect = 0.009 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 506 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3| Length = 206 Score = 39.7 bits (91), Expect = 0.009 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 506 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +2 Query: 86 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 241 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 242 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 415 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +2 Query: 86 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 241 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 242 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 415 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor| Length = 324 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 509 F + +D+ G+T+GKG++G + R G + +P +HR A P +V Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG+ G RT N VYKI Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255
>RL3_CORGL (Q8NT09) 50S ribosomal protein L3| Length = 218 Score = 39.3 bits (90), Expect = 0.011 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 506 +F + +D+ G TKGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_STAAW (P60450) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 110 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 193 KVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAS (Q6G771) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 110 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 193 KVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 110 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 193 KVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAN (P60449) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 110 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 193 KVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAM (P60448) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 110 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 193 KVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3| Length = 209 Score = 38.9 bits (89), Expect = 0.015 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F ++ID+ GV+KGKG++G + R G +R P Sbjct: 99 FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------------MS 131 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 132 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 181 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V +R S+ K Sbjct: 182 KVILVKGNVPGPKKGLVEIRTSIKK 206
>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3| Length = 209 Score = 38.9 bits (89), Expect = 0.015 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 1/140 (0%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYT 509 +DA F + +++D+ G +KGKG+ G + R R P R R+ +G P RV Sbjct: 99 VDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNRVFKG 157 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 A G+ G T N ++ K+ + + L Sbjct: 158 KALPGRMGGEQVTVQNLEIIKVD-------------------------------AERNLL 186 Query: 328 MIKGCCVGPKKRVVTLRQSL 269 ++KG G KK VT+R ++ Sbjct: 187 LVKGNVPGAKKSYVTVRSAI 206
>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3| Length = 211 Score = 38.9 bits (89), Expect = 0.015 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 527 +F + E ID G +KGKG +GV+ RW P +K HR G RK P Sbjct: 95 IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147 Query: 526 ARVSYTVARAGQNGYHHRTEMNKKVYKI 443 RV AG G T N +V +I Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175
>RL3_NEIMB (P60444) 50S ribosomal protein L3| Length = 214 Score = 38.9 bits (89), Expect = 0.015 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 509 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RL3_NEIMA (P60443) 50S ribosomal protein L3| Length = 214 Score = 38.9 bits (89), Expect = 0.015 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 509 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 38.9 bits (89), Expect = 0.015 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Frame = +2 Query: 86 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 241 + H+ F +++T+++LR+S L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 242 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 415 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RL3_VIBPA (Q87T13) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 509 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_COREF (Q8FS80) 50S ribosomal protein L3| Length = 218 Score = 37.7 bits (86), Expect = 0.033 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 506 +F + +D+ G +KGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_BUCBP (Q89A68) 50S ribosomal protein L3| Length = 214 Score = 37.4 bits (85), Expect = 0.044 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 506 +F + +DIIG +KGKG+ G V RW L R IG P RV Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG G H T N + KI Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182
>RL3_STAES (Q8CRG0) 50S ribosomal protein L3| Length = 220 Score = 37.0 bits (84), Expect = 0.057 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 110 FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP---------------------------MA 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V + S+ K Sbjct: 193 SVILVKGNVPGPKKGLVEITTSIKK 217
>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3| Length = 220 Score = 37.0 bits (84), Expect = 0.057 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 110 FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP---------------------------MA 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK +V + S+ K Sbjct: 193 SVILVKGNVPGPKKGLVEITTSIKK 217
>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.057 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 509 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.057 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 509 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.057 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 509 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_BUCAP (Q8K950) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.057 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G++KGKG+ G V RW R TH R IG P RV Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G + T N + KI Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180
>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3| Length = 403 Score = 37.0 bits (84), Expect = 0.057 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = -2 Query: 688 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVS 515 P+DA F + + G T G++G + RWG+ P R+T + R++ +G+ AR+ Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 G GY RT ++ +I Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295
>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3| Length = 221 Score = 37.0 bits (84), Expect = 0.057 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 503 V + +DI GV+KGKG++GV+ R+G P+ G R IG P R Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 502 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 323 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199 Query: 322 KGCCVGPKKRVVTLRQS 272 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVIRRS 216
>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3| Length = 233 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVS 515 +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R+ Sbjct: 115 VESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIF 174 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 +G G RT N V ++ Sbjct: 175 PGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3| Length = 233 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVS 515 +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R+ Sbjct: 115 VESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIF 174 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 +G G RT N V ++ Sbjct: 175 PGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3| Length = 233 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVS 515 +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R+ Sbjct: 115 VESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIF 174 Query: 514 YTVARAGQNGYHHRTEMNKKVYKI 443 +G G RT N V ++ Sbjct: 175 PGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_TREPA (O83219) 50S ribosomal protein L3| Length = 208 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 506 V + +D+ ++KGKG++GVV RWG + R +H + R+ G P R V Sbjct: 98 VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 G+ G T N ++ +I Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177
>RL3_MYCGA (O52332) 50S ribosomal protein L3| Length = 236 Score = 36.6 bits (83), Expect = 0.074 Identities = 22/77 (28%), Positives = 40/77 (51%) Frame = -2 Query: 685 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 506 ++ +FQ+ +++D+ TKG+G+ G + RW ++ K H GA +P R +V Sbjct: 96 VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145 Query: 505 ARAGQNGYHHRTEMNKK 455 +AG+ G + M K Sbjct: 146 -QAGRGGSQAQRVMKGK 161
>RL3_MYCTU (P60442) 50S ribosomal protein L3| Length = 217 Score = 36.2 bits (82), Expect = 0.097 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 512 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_MYCBO (P60441) 50S ribosomal protein L3| Length = 217 Score = 36.2 bits (82), Expect = 0.097 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 512 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3| Length = 220 Score = 36.2 bits (82), Expect = 0.097 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 8/145 (5%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 494 F+ ++ID+ G +KGKG++G + R G R P Sbjct: 110 FEAGDIIDVTGTSKGKGFQGAIKRHGQARGP---------------------------MA 142 Query: 493 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD--- 335 + HR G VG + DAS F + +K MGG + VV+ D Sbjct: 143 HGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTEN 192 Query: 334 -YLMIKGCCVGPKKRVVTLRQSLLK 263 +++KG GPKK V ++ S+ K Sbjct: 193 NVILVKGNVPGPKKGFVEIQTSIKK 217
>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3| Length = 211 Score = 35.8 bits (81), Expect = 0.13 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +FQ +M+D+ G +KGKG+ G + RW Sbjct: 100 LFQAGQMVDVTGESKGKGFAGTIKRW 125
>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor| Length = 271 Score = 35.4 bits (80), Expect = 0.17 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Frame = -2 Query: 682 DAVFQKDEMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWHPARVS 515 D +F++ +++D+ G T GKG++G + R G K+HR L + P RV Sbjct: 154 DEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTTPGRVY 211 Query: 514 YTVARAGQNGYHHRTEMNK-KVYKIGK 437 G+ G RT++ K K+ K+ K Sbjct: 212 KGKKMPGRMG-GTRTKIRKLKIVKVDK 237
>RL3_LACPL (Q88XY6) 50S ribosomal protein L3| Length = 209 Score = 35.4 bits (80), Expect = 0.17 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 500 +F + +D+ G+TKG GY+G + + G +R P R R+ +GA RV Sbjct: 102 IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRVFKGKKL 160 Query: 499 AGQNGYHHRTEMNKKVYK 446 G+ G H RT N ++ + Sbjct: 161 PGRMGNHQRTMQNLQIVR 178
>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)| Length = 269 Score = 35.4 bits (80), Expect = 0.17 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 506 F++ + +D+ V+KGKG+ GV+ R+G L R +H G++ P RV Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 G G H T N KV K+ Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239
>RL3_XANCP (Q8PC49) 50S ribosomal protein L3| Length = 216 Score = 35.4 bits (80), Expect = 0.17 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3| Length = 216 Score = 35.4 bits (80), Expect = 0.17 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_MYCLE (P30762) 50S ribosomal protein L3| Length = 217 Score = 35.0 bits (79), Expect = 0.22 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 512 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 AG+ G T N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185
>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3| Length = 211 Score = 35.0 bits (79), Expect = 0.22 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = -2 Query: 655 IDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWHPARVSYTVARAGQN 488 +DI G +KGKG GV+ + G + R R R IG +W P +V AGQ+ Sbjct: 106 VDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW-PGKVLKGKKMAGQH 164 Query: 487 GYHHRTEMNKKVYKI 443 G T N KV K+ Sbjct: 165 GNATVTVQNLKVVKV 179
>RL3_BUCAI (P57591) 50S ribosomal protein L3| Length = 209 Score = 34.7 bits (78), Expect = 0.28 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F + +DI G++KGKG+ G V RW Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125
>RL3_COXBU (Q83ES4) 50S ribosomal protein L3| Length = 217 Score = 34.7 bits (78), Expect = 0.28 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 509 +F++ +++D+ G+T+GKG+ G V R R TH R IG P RV Sbjct: 103 IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTPGRVWKG 161 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G + T ++++ K+ Sbjct: 162 KKMAGQLGNVYCTVQSQEIIKV 183
>RL3_BORBU (P94267) 50S ribosomal protein L3| Length = 206 Score = 34.7 bits (78), Expect = 0.28 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 509 VF+ + +D+ G TKGKG++G + R + P K HR L A PAR Sbjct: 99 VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTPARTFKG 156 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG+ + +T N +V I Sbjct: 157 TKMAGRMAGNQQTIQNLEVVLI 178
>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3| Length = 219 Score = 34.3 bits (77), Expect = 0.37 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 503 VF+ +D+ G++KGKG++GV+ ++G P G R IG P R Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 R G + T N +V K+ Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190
>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3| Length = 219 Score = 34.3 bits (77), Expect = 0.37 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -2 Query: 655 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 485 +D+ G++KGKG+ G V RW L R IG P +V AG G Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167 Query: 484 YHHRTEMNKKVYKI 443 Y T N V I Sbjct: 168 YEKATIQNLAVINI 181
>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3| Length = 310 Score = 34.3 bits (77), Expect = 0.37 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 1/151 (0%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 497 +F + +D +TKGKG+ G + RW KV +G H A Sbjct: 98 IFNSGDKVDAQAITKGKGFTGAIKRWNF------------KVGPLG--HGA--------- 134 Query: 496 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV-VKADYLMIK 320 GY HR + + + G GQ ++ + + ++ + +++K Sbjct: 135 ---GYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVSIELEKNLILVK 191 Query: 319 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 227 G GP +V L+ ++ S+ ++ IKL Sbjct: 192 GSVPGPVNSLVLLKTTV---KSKKQVDPIKL 219
>RL3_PSESM (Q889X1) 50S ribosomal protein L3| Length = 211 Score = 34.3 bits (77), Expect = 0.37 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3| Length = 219 Score = 33.9 bits (76), Expect = 0.48 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 581 F+ ++ID+ GV+KGKG++G + R R P Sbjct: 110 FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140
>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3| Length = 214 Score = 33.9 bits (76), Expect = 0.48 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 506 +F +++D+ G +KGKG+ GV+ R + R R IG A P RV Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162 Query: 505 ARAGQNG 485 AGQ G Sbjct: 163 RMAGQYG 169
>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)| Length = 259 Score = 33.9 bits (76), Expect = 0.48 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGA-WHPARVSYTV 506 +F++ +++D+ G T GKG++G + R R + TH + R++ IGA P RV Sbjct: 144 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGK 202 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 G+ G R K+ KI Sbjct: 203 KMPGRMGGTKRKIRKLKIVKI 223
>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3| Length = 218 Score = 33.9 bits (76), Expect = 0.48 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPARVSYTVA 503 +FQ + ID+ ++KG+G+ GV+ R P R+ A IG +PARV Sbjct: 100 IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPARVWKGKG 159 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 G G T N KV +I Sbjct: 160 MPGHMGNTLTTIQNLKVVEI 179
>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3| Length = 192 Score = 33.9 bits (76), Expect = 0.48 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -2 Query: 637 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 467 TKG+G+ GV+ RW P HR R+ IG W P RV AGQ G T Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158 Query: 466 MNKKV 452 N+ V Sbjct: 159 QNEIV 163
>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3| Length = 221 Score = 33.9 bits (76), Expect = 0.48 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 503 +F +D+ G++KGKG++GV+ ++G P+ G R IG P R Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 R G T N +V K+ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190
>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)| Length = 121 Score = 33.5 bits (75), Expect = 0.63 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F + +D+ G +KGKG++G V RW R TH +G+ P RV Sbjct: 12 IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKG 70 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T + +V ++ Sbjct: 71 KKMAGHLGNERVTVQSLEVVRV 92
>RL3_HAEIN (P44344) 50S ribosomal protein L3| Length = 208 Score = 33.5 bits (75), Expect = 0.63 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F + +D+ G +KGKG++G V RW R TH +G+ P RV Sbjct: 99 IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKG 157 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T + +V ++ Sbjct: 158 KKMAGHLGAERVTVQSLEVVRV 179
>RL3_CHLTR (O84533) 50S ribosomal protein L3| Length = 221 Score = 33.5 bits (75), Expect = 0.63 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 548 +F +DI G++KGKG++GV+ ++G P+ G + A Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153
>RL3_STRAW (Q82DP5) 50S ribosomal protein L3| Length = 214 Score = 33.1 bits (74), Expect = 0.82 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYT 509 F+ +D+ G +KGKG+ GV+ R G ++ HR + G P RV Sbjct: 105 FEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKG 162 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 + AG+ G T N V+ + Sbjct: 163 LRMAGRMGNERVTTQNLTVHAV 184
>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 33.1 bits (74), Expect = 0.82 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Frame = +2 Query: 488 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 649 + +SPS S+ S+ G+ +KT +GL G TP +N F ++L GY+ D Sbjct: 68 VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127
>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3| Length = 215 Score = 33.1 bits (74), Expect = 0.82 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 512 ++F + +DI G+TKGKG++G + R R+ TH G+ P RV Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 +G G ++ N +V KI Sbjct: 164 GKKMSGHMGAVRQSVQNLEVVKI 186
>RL3_RALSO (Q8XV12) 50S ribosomal protein L3| Length = 220 Score = 33.1 bits (74), Expect = 0.82 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 506 +F D+ ID+ G T GKGY G + R+ + R R IG A P RV Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 G G RT N + +I Sbjct: 163 RMTGHMGDVTRTVQNLVIVRI 183
>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3| Length = 207 Score = 32.7 bits (73), Expect = 1.1 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 581 F +++D+ G +KGKG++G + R G +R P Sbjct: 100 FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGP 130
>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3| Length = 255 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTV 506 F + +DI GVT GKG+ G + RW L R TH R G P R Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165 Query: 505 ARAGQNGYHHRTEMNKKVYKI 443 AG G T +N V+K+ Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186
>RL3_MYCPN (P75580) 50S ribosomal protein L3| Length = 287 Score = 32.7 bits (73), Expect = 1.1 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 497 +FQ E +D+ ++KG+G+ G + RW P GA +P R +V +A Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRFQGSV-QA 149 Query: 496 GQNGYHHRTEMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 320 G+ G ++V+K K+ G H+ T + + GF ++ +++ Sbjct: 150 GRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML----VLVS 194 Query: 319 GCCVGPKKRVVTLRQSLLK 263 G GP+ VV +R + K Sbjct: 195 GAIAGPEGGVVLIRTAKKK 213
>RL3_XYLFT (Q87E82) 50S ribosomal protein L3| Length = 215 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -2 Query: 679 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 512 ++F + +DI G+TKGKG++G + R R+ TH G+ P RV Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163 Query: 511 TVARAGQNGYHHRTEMNKKVYKI 443 +G G ++ N +V KI Sbjct: 164 GKKMSGHMGAVKQSVQNLEVIKI 186
>RL3_PASMU (Q9CL32) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH +G+ P RV Sbjct: 100 IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T + +V ++ Sbjct: 159 KKMAGHLGNERVTVQSLEVVRV 180
>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3| Length = 211 Score = 32.3 bits (72), Expect = 1.4 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F +++D+ G +KGKG+ G + RW Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125
>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3| Length = 208 Score = 32.3 bits (72), Expect = 1.4 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH +G+ P RV Sbjct: 99 IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKG 157 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AG G T + +V ++ Sbjct: 158 KKMAGHLGAERVTVQSLEVVRV 179
>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +2 Query: 479 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 646 V I+T N S+ G+ +KT +GL G TP +N F ++L GY+ Sbjct: 67 VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126 Query: 647 D 649 D Sbjct: 127 D 127
>RL3_YERPS (P11252) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_ONYPE (P60455) 50S ribosomal protein L3| Length = 157 Score = 32.0 bits (71), Expect = 1.8 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 581 +FQ +++D+ G +KGKG+ G + R +R P Sbjct: 42 LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGP 73
>RL3_WIGBR (Q8D212) 50S ribosomal protein L3| Length = 215 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -2 Query: 655 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 485 ++I G++KGKG+ G + RW L R IG P +V +G G Sbjct: 107 VNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLG 166 Query: 484 YHHRTEMNKKVYKI 443 Y+ T N V KI Sbjct: 167 YNKNTVKNLFVVKI 180
>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3| Length = 214 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTVA 503 F+ +D+ +KGKG+ GV+ R + HR R IG P RV + Sbjct: 105 FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMR 164 Query: 502 RAGQNGYHHRTEMNKKVYKI 443 AG+ G T N V+ + Sbjct: 165 MAGRMGNERVTTQNLTVHAV 184
>RL3_MYCGE (P47397) 50S ribosomal protein L3| Length = 257 Score = 31.6 bits (70), Expect = 2.4 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRW 599 +F+ E +D+ +TKG+G+ G + RW Sbjct: 101 LFKIGEYVDVTSLTKGRGFTGAIKRW 126
>RL3_SHIFL (P60447) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTY (P60446) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTI (P60445) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECOLI (P60438) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECOL6 (P60439) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECO57 (P60440) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SHEON (Q8EK68) 50S ribosomal protein L3| Length = 212 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = -2 Query: 676 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 509 +F +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161 Query: 508 VARAGQNGYHHRTEMNKKVYKI 443 +G G T N V ++ Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183
>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment) Length = 572 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 520 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 356 + Y G + Y + +G GQ ET+ + + +R++ D+TP+GG P Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460 Query: 355 YGV 347 GV Sbjct: 461 RGV 463
>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +2 Query: 131 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 280 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +2 Query: 131 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 280 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 366 Score = 30.4 bits (67), Expect = 5.3 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Frame = +2 Query: 107 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 280 ++ +++LR+S L + ++P ++ + P+L D+ Q +T+G ++ + Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275 Query: 281 EGHHTLLWPDTASLDHQVVGLHHTIVR 361 E ++ D LD Q T++R Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +2 Query: 185 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 364 E+ P ++ E L C RG G+ + WP+ + + G +H + Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729 Query: 365 ATHGSD 382 A HG+D Sbjct: 730 A-HGTD 734
>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1003 Score = 30.4 bits (67), Expect = 5.3 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 490 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 591 +D+ E++ R P +++R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66
>RL3_PROMM (Q7V542) 50S ribosomal protein L3| Length = 218 Score = 30.4 bits (67), Expect = 5.3 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGA-WHPARVSYTVAR 500 F+ + +D+ G T G+G+ G R G +R P + R+ GA P R+ Sbjct: 102 FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRM 161 Query: 499 AGQNGYHHRTEMNKKVYKI 443 AG+ G RT + K+ Sbjct: 162 AGRYGGKKRTTRGLTILKV 180
>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)| Length = 140 Score = 30.4 bits (67), Expect = 5.3 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWG 596 F+ + +D+ G +KGKG+ GV+ R G Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130
>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 30.4 bits (67), Expect = 5.3 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = +2 Query: 125 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 292 LR S L LA+ P L L G ++T + KL G E D + T GL + GLA HH Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183 Query: 293 TLLWP 307 +L P Sbjct: 184 EVLAP 188
>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3| Length = 228 Score = 30.0 bits (66), Expect = 7.0 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 5/139 (3%) Frame = -2 Query: 673 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPARVSYT 509 F + +DI G +KG+G+ GV+ R T +K HR + P+R Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176 Query: 508 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 329 AGQ G T N +V ++ DA + L Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAEN-----------------------NLL 205 Query: 328 MIKGCCVGPKKRVVTLRQS 272 MI+G GP V++RQ+ Sbjct: 206 MIRGAVPGPNGGFVSIRQT 224
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/85 (21%), Positives = 35/85 (41%) Frame = +3 Query: 219 TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 398 T +++S+++R + DWR R F +QH V Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431 Query: 399 SNSVEASWVSCPTLPILYTFLFISV 473 S+ SW +C TL +++ F+ +++ Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456
>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)| Length = 241 Score = 30.0 bits (66), Expect = 7.0 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = -2 Query: 688 PIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 569 P+ A Q D + +D+ G + GKG+ G + RW L R TH Sbjct: 92 PVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGL-RATH 135
>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 7389 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = +2 Query: 98 RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 262 R+ +T+L + +LE A++ L G L++ +L +DK+E++ L ET+GL Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567
>RL3_BRAJA (Q89J84) 50S ribosomal protein L3| Length = 238 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = -2 Query: 688 PIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 569 P+ A Q D + +D+ G + GKG+ G + RW L R TH Sbjct: 92 PVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGL-RATH 135
>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1004 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 490 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 591 +D+ E++ R P ++ R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66
>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 338 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Frame = +2 Query: 86 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 250 +SH+ + + +++LRS+ + I E + P++ + K DF Q + Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237 Query: 251 TRGLLQQGLAEGHHTLLWPDTASLDH 328 + G + + +A+ TLL D LD+ Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263
>RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3| Length = 196 Score = 29.6 bits (65), Expect = 9.1 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Frame = -2 Query: 661 EMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAG 494 + ID+ G + GKG+ G+ R TR P K HR + P RV AG Sbjct: 95 QFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGM--GTTPGRVLPGKKMAG 152 Query: 493 QNGYHHRTEMNKKVYKIGKVGQE 425 Q G ++ KK+ I G E Sbjct: 153 QLG--NKVTKTKKLKIIQVNGNE 173 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,638,162 Number of Sequences: 219361 Number of extensions: 2274770 Number of successful extensions: 6796 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 6439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6717 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
