| Clone Name | rbags37g21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip ... | 106 | 5e-23 | 2 | CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chiti... | 100 | 5e-21 | 3 | RL25_ANAMM (Q5P9A5) 50S ribosomal protein L25 (General stress pr... | 31 | 3.6 | 4 | DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1... | 31 | 3.6 |
|---|
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 106 bits (265), Expect = 5e-23 Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Frame = -3 Query: 602 YYQPLWRKYSGVIDYVNFQFYGYGANTNVEYYMQFYNEQARNYPGSGGSKLLASFKTGDV 423 +YQ LW KY IDYVNFQFY Y A T+VE +++++ EQ+ NY G K+L SF T D Sbjct: 193 HYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNY---HGGKVLVSFST-DS 248 Query: 422 TGLLSPDQG-ISAAKELQRQGKLPGIFIFSADSSKKSPYGFKYETQAQQIVAN 267 +G L PD G A L++QGKL GIF++SAD S S F+YE QAQ ++A+ Sbjct: 249 SGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLAS 301
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 100 bits (248), Expect = 5e-21 Identities = 52/112 (46%), Positives = 70/112 (62%) Frame = -3 Query: 602 YYQPLWRKYSGVIDYVNFQFYGYGANTNVEYYMQFYNEQARNYPGSGGSKLLASFKTGDV 423 +YQ LW KY IDYVNFQFY Y + +VE +++++ Q NYP G K+L SF T + Sbjct: 167 HYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEMQRSNYP---GGKVLVSFSTDNS 223 Query: 422 TGLLSPDQGISAAKELQRQGKLPGIFIFSADSSKKSPYGFKYETQAQQIVAN 267 GL + A L++QGKL GIF++SAD S S FKYE QAQ ++A+ Sbjct: 224 GGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275
>RL25_ANAMM (Q5P9A5) 50S ribosomal protein L25 (General stress protein CTC)| Length = 218 Score = 30.8 bits (68), Expect = 3.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -3 Query: 575 SGVIDYVNFQFYGYGANTNVEYYMQFYNEQ 486 SG + +V+FQF GA VE + F NEQ Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQ 117
>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 101 SRVPHRCLFKLEYVHDIYLVPVHIRDTWRFVRIYAVCSKVV 223 ++V L ++ I+LVP H+RD +FV +A+CS+ V Sbjct: 417 NKVNEALLQRINSAKKIHLVPCHLRD--KFVLRFAICSRTV 455 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,063,762 Number of Sequences: 219361 Number of extensions: 1504995 Number of successful extensions: 5297 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5294 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)