>ref|XM_467648.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1649

 Score =  400 bits (202), Expect = e-108
 Identities = 467/554 (84%), Gaps = 1/554 (0%)
 Strand = Plus / Minus

                                                                        
Query: 121  tcttgattctccgactaagattctgcattatgtcgacgagcatcagcttcttctgcaatc 180
            |||||||||| |||||||||||||| || |  || | ||| | |||||||||||||||||
Sbjct: 1529 tcttgattctgcgactaagattctgtatcacatccaggagaagcagcttcttctgcaatc 1470

                                                                        
Query: 181  taaactggacggccagttcagtagtaagagggggttctccctttaggatggcctggtcat 240
            ||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||||| ||| |
Sbjct: 1469 taaactgcacggctagttcagtagtaagaggtggttctccttttagtatggcctcgtctt 1410

                                                                        
Query: 241  ccattatcttggtgtggaagtgttggagggcaatggcgcaaagcgcgagaacagttcgga 300
            |||||||||| |||||||||||||| || |||| || |||||| || || ||||||||||
Sbjct: 1409 ccattatcttcgtgtggaagtgttgtagagcaaaggtgcaaagtgcaaggacagttcgga 1350

                                                                        
Query: 301  acgcagaggcttcgacagtagggcctagaggagctttcgcactaagtgacatcaaagttt 360
              || || ||||| ||||  |||||||  ||||||||| |  |||| ||||||||||| |
Sbjct: 1349 gtgctgaagcttcaacagctgggcctaatggagctttctccttaagagacatcaaagtct 1290

                                                                        
Query: 361  tcagatcgtgcttacccacagcctctgggtcagctgcaagaagaactcgcagcgcagcta 420
            | || || ||   || |||||| || || |||||||||| || ||| |  |  ||||| |
Sbjct: 1289 tgaggtcatggccactcacagcgtccggatcagctgcaataataacccttaaagcagcca 1230

                                                                        
Query: 421  ataagcgcccatctactatgtccggacctcctaagctgacctttagaatggcaccctctc 480
            ||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||
Sbjct: 1229 ataagcgcccatctactatttctggacctcctatgctgacctttagaatagcaccctctc 1170

                                                                        
Query: 481  cgtgtagatttagctgtgacaagatttcctgttgccacttggctggtgttgagaagttgg 540
            | |  |||||||||||||||||||| |||||||||||||||||||| | ||| ||||| |
Sbjct: 1169 catacagatttagctgtgacaagatatcctgttgccacttggctggagctgaaaagttag 1110

                                                                        
Query: 541  gattagaaacccctgctgccatgctagcagcatcgagaagattcccatcatagctcagtt 600
            |   |||||| ||||||||||||||||||||||| || ||| | ||||||||||||||||
Sbjct: 1109 gcgaagaaactcctgctgccatgctagcagcatctaggagagttccatcatagctcagtt 1050

                                                                        
Query: 601  ccacttgatcgtatgggttcgatgttactacaaaatccataatcaagaagataaaaatca 660
            |||||||||| || |  || ||||||| ||| ||||||||||||||||||  | ||||||
Sbjct: 1049 ccacttgatcatacgaatttgatgttattac-aaatccataatcaagaaggaagaaatca 991

                          
Query: 661  ttggggtagcaacc 674
            || |||||||||||
Sbjct: 990  ttagggtagcaacc 977

>dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058C09, full
            insert sequence
          Length = 1649

 Score =  400 bits (202), Expect = e-108
 Identities = 467/554 (84%), Gaps = 1/554 (0%)
 Strand = Plus / Minus

                                                                        
Query: 121  tcttgattctccgactaagattctgcattatgtcgacgagcatcagcttcttctgcaatc 180
            |||||||||| |||||||||||||| || |  || | ||| | |||||||||||||||||
Sbjct: 1529 tcttgattctgcgactaagattctgtatcacatccaggagaagcagcttcttctgcaatc 1470

                                                                        
Query: 181  taaactggacggccagttcagtagtaagagggggttctccctttaggatggcctggtcat 240
            ||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||||| ||| |
Sbjct: 1469 taaactgcacggctagttcagtagtaagaggtggttctccttttagtatggcctcgtctt 1410

                                                                        
Query: 241  ccattatcttggtgtggaagtgttggagggcaatggcgcaaagcgcgagaacagttcgga 300
            |||||||||| |||||||||||||| || |||| || |||||| || || ||||||||||
Sbjct: 1409 ccattatcttcgtgtggaagtgttgtagagcaaaggtgcaaagtgcaaggacagttcgga 1350

                                                                        
Query: 301  acgcagaggcttcgacagtagggcctagaggagctttcgcactaagtgacatcaaagttt 360
              || || ||||| ||||  |||||||  ||||||||| |  |||| ||||||||||| |
Sbjct: 1349 gtgctgaagcttcaacagctgggcctaatggagctttctccttaagagacatcaaagtct 1290

                                                                        
Query: 361  tcagatcgtgcttacccacagcctctgggtcagctgcaagaagaactcgcagcgcagcta 420
            | || || ||   || |||||| || || |||||||||| || ||| |  |  ||||| |
Sbjct: 1289 tgaggtcatggccactcacagcgtccggatcagctgcaataataacccttaaagcagcca 1230

                                                                        
Query: 421  ataagcgcccatctactatgtccggacctcctaagctgacctttagaatggcaccctctc 480
            ||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||
Sbjct: 1229 ataagcgcccatctactatttctggacctcctatgctgacctttagaatagcaccctctc 1170

                                                                        
Query: 481  cgtgtagatttagctgtgacaagatttcctgttgccacttggctggtgttgagaagttgg 540
            | |  |||||||||||||||||||| |||||||||||||||||||| | ||| ||||| |
Sbjct: 1169 catacagatttagctgtgacaagatatcctgttgccacttggctggagctgaaaagttag 1110

                                                                        
Query: 541  gattagaaacccctgctgccatgctagcagcatcgagaagattcccatcatagctcagtt 600
            |   |||||| ||||||||||||||||||||||| || ||| | ||||||||||||||||
Sbjct: 1109 gcgaagaaactcctgctgccatgctagcagcatctaggagagttccatcatagctcagtt 1050

                                                                        
Query: 601  ccacttgatcgtatgggttcgatgttactacaaaatccataatcaagaagataaaaatca 660
            |||||||||| || |  || ||||||| ||| ||||||||||||||||||  | ||||||
Sbjct: 1049 ccacttgatcatacgaatttgatgttattac-aaatccataatcaagaaggaagaaatca 991

                          
Query: 661  ttggggtagcaacc 674
            || |||||||||||
Sbjct: 990  ttagggtagcaacc 977

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  210 bits (106), Expect = 4e-51
 Identities = 283/342 (82%)
 Strand = Plus / Minus

                                                                            
Query: 121      tcttgattctccgactaagattctgcattatgtcgacgagcatcagcttcttctgcaatc 180
                |||||||||| |||||||||||||| || |  || | ||| | |||||||||||||||||
Sbjct: 30614519 tcttgattctgcgactaagattctgtatcacatccaggagaagcagcttcttctgcaatc 30614460

                                                                            
Query: 181      taaactggacggccagttcagtagtaagagggggttctccctttaggatggcctggtcat 240
                ||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||||| ||| |
Sbjct: 30614459 taaactgcacggctagttcagtagtaagaggtggttctccttttagtatggcctcgtctt 30614400

                                                                            
Query: 241      ccattatcttggtgtggaagtgttggagggcaatggcgcaaagcgcgagaacagttcgga 300
                |||||||||| |||||||||||||| || |||| || |||||| || || ||||||||||
Sbjct: 30614399 ccattatcttcgtgtggaagtgttgtagagcaaaggtgcaaagtgcaaggacagttcgga 30614340

                                                                            
Query: 301      acgcagaggcttcgacagtagggcctagaggagctttcgcactaagtgacatcaaagttt 360
                  || || ||||| ||||  |||||||  ||||||||| |  |||| ||||||||||| |
Sbjct: 30614339 gtgctgaagcttcaacagctgggcctaatggagctttctccttaagagacatcaaagtct 30614280

                                                                            
Query: 361      tcagatcgtgcttacccacagcctctgggtcagctgcaagaagaactcgcagcgcagcta 420
                | || || ||   || |||||| || || |||||||||| || ||| |  |  ||||| |
Sbjct: 30614279 tgaggtcatggccactcacagcgtccggatcagctgcaataataacccttaaagcagcca 30614220

                                                          
Query: 421      ataagcgcccatctactatgtccggacctcctaagctgacct 462
                ||||||||||||||||||| || |||||||||| ||||||||
Sbjct: 30614219 ataagcgcccatctactatttctggacctcctatgctgacct 30614178



 Score =  198 bits (100), Expect = 2e-47
 Identities = 188/216 (87%), Gaps = 1/216 (0%)
 Strand = Plus / Minus

                                                                            
Query: 459      acctttagaatggcaccctctccgtgtagatttagctgtgacaagatttcctgttgccac 518
                ||||||||||| ||||||||||| |  |||||||||||||||||||| ||||||||||||
Sbjct: 30614051 acctttagaatagcaccctctccatacagatttagctgtgacaagatatcctgttgccac 30613992

                                                                            
Query: 519      ttggctggtgttgagaagttgggattagaaacccctgctgccatgctagcagcatcgaga 578
                |||||||| | ||| ||||| ||   |||||| ||||||||||||||||||||||| || 
Sbjct: 30613991 ttggctggagctgaaaagttaggcgaagaaactcctgctgccatgctagcagcatctagg 30613932

                                                                            
Query: 579      agattcccatcatagctcagttccacttgatcgtatgggttcgatgttactacaaaatcc 638
                ||| | |||||||||||||||||||||||||| || |  || ||||||| ||| ||||||
Sbjct: 30613931 agagttccatcatagctcagttccacttgatcatacgaatttgatgttattac-aaatcc 30613873

                                                    
Query: 639      ataatcaagaagataaaaatcattggggtagcaacc 674
                ||||||||||||  | |||||||| |||||||||||
Sbjct: 30613872 ataatcaagaaggaagaaatcattagggtagcaacc 30613837

>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score =  210 bits (106), Expect = 4e-51
 Identities = 283/342 (82%)
 Strand = Plus / Minus

                                                                          
Query: 121    tcttgattctccgactaagattctgcattatgtcgacgagcatcagcttcttctgcaatc 180
              |||||||||| |||||||||||||| || |  || | ||| | |||||||||||||||||
Sbjct: 126527 tcttgattctgcgactaagattctgtatcacatccaggagaagcagcttcttctgcaatc 126468

                                                                          
Query: 181    taaactggacggccagttcagtagtaagagggggttctccctttaggatggcctggtcat 240
              ||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||||| ||| |
Sbjct: 126467 taaactgcacggctagttcagtagtaagaggtggttctccttttagtatggcctcgtctt 126408

                                                                          
Query: 241    ccattatcttggtgtggaagtgttggagggcaatggcgcaaagcgcgagaacagttcgga 300
              |||||||||| |||||||||||||| || |||| || |||||| || || ||||||||||
Sbjct: 126407 ccattatcttcgtgtggaagtgttgtagagcaaaggtgcaaagtgcaaggacagttcgga 126348

                                                                          
Query: 301    acgcagaggcttcgacagtagggcctagaggagctttcgcactaagtgacatcaaagttt 360
                || || ||||| ||||  |||||||  ||||||||| |  |||| ||||||||||| |
Sbjct: 126347 gtgctgaagcttcaacagctgggcctaatggagctttctccttaagagacatcaaagtct 126288

                                                                          
Query: 361    tcagatcgtgcttacccacagcctctgggtcagctgcaagaagaactcgcagcgcagcta 420
              | || || ||   || |||||| || || |||||||||| || ||| |  |  ||||| |
Sbjct: 126287 tgaggtcatggccactcacagcgtccggatcagctgcaataataacccttaaagcagcca 126228

                                                        
Query: 421    ataagcgcccatctactatgtccggacctcctaagctgacct 462
              ||||||||||||||||||| || |||||||||| ||||||||
Sbjct: 126227 ataagcgcccatctactatttctggacctcctatgctgacct 126186



 Score =  198 bits (100), Expect = 2e-47
 Identities = 188/216 (87%), Gaps = 1/216 (0%)
 Strand = Plus / Minus

                                                                          
Query: 459    acctttagaatggcaccctctccgtgtagatttagctgtgacaagatttcctgttgccac 518
              ||||||||||| ||||||||||| |  |||||||||||||||||||| ||||||||||||
Sbjct: 126059 acctttagaatagcaccctctccatacagatttagctgtgacaagatatcctgttgccac 126000

                                                                          
Query: 519    ttggctggtgttgagaagttgggattagaaacccctgctgccatgctagcagcatcgaga 578
              |||||||| | ||| ||||| ||   |||||| ||||||||||||||||||||||| || 
Sbjct: 125999 ttggctggagctgaaaagttaggcgaagaaactcctgctgccatgctagcagcatctagg 125940

                                                                          
Query: 579    agattcccatcatagctcagttccacttgatcgtatgggttcgatgttactacaaaatcc 638
              ||| | |||||||||||||||||||||||||| || |  || ||||||| ||| ||||||
Sbjct: 125939 agagttccatcatagctcagttccacttgatcatacgaatttgatgttattac-aaatcc 125881

                                                  
Query: 639    ataatcaagaagataaaaatcattggggtagcaacc 674
              ||||||||||||  | |||||||| |||||||||||
Sbjct: 125880 ataatcaagaaggaagaaatcattagggtagcaacc 125845

>gb|AC113506.12| Mus musculus chromosome 9, clone RP23-373O2, complete sequence
          Length = 171170

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 629   tacaaaatccataatcaagaag 650
             ||||||||||||||||||||||
Sbjct: 23747 tacaaaatccataatcaagaag 23768

>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence
          Length = 127540

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 519    ttggctggtgttgagaagttgg 540
              ||||||||||||||||||||||
Sbjct: 106971 ttggctggtgttgagaagttgg 106992

>emb|AL391422.17| Human DNA sequence from clone RP11-420L9 on chromosome 6 Contains the
             5' end of a novel gene, a novel pseudogene, the gene for
             XAP-5-like protein (X5L) (DNA segment on chromosome 6
             (unique) 2654 expressed sequence) (D6S2654E) a novel gene
             and CpG islands, complete sequence
          Length = 138221

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    tggggatttatttgttcatat 36
             |||||||||||||||||||||
Sbjct: 88888 tggggatttatttgttcatat 88908

>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence
          Length = 168142

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 640   taatcaagaagataaaaatc 659
             ||||||||||||||||||||
Sbjct: 13658 taatcaagaagataaaaatc 13639

>ref|XM_639613.1| Dictyostelium discoideum hypothetical protein (DDB0217113), partial
           mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 649 agataaaaatcattggggta 668
           ||||||||||||||||||||
Sbjct: 396 agataaaaatcattggggta 415

>ref|XM_639454.1| Dictyostelium discoideum hypothetical protein (DDB0217343), partial
           mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 649 agataaaaatcattggggta 668
           ||||||||||||||||||||
Sbjct: 396 agataaaaatcattggggta 415

>ref|XM_425235.1| PREDICTED: Gallus gallus similar to inward rectifier potassium
           channel Kir2.2 (LOC427662), mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 551 ccctgctgccatgctagcag 570
           ||||||||||||||||||||
Sbjct: 276 ccctgctgccatgctagcag 295

>emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 150972

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   gttggagggcaatggcgcaa 281
             ||||||||||||||||||||
Sbjct: 61849 gttggagggcaatggcgcaa 61868

>emb|AL391241.21| Human DNA sequence from clone RP13-158L7 on chromosome X Contains a
             zinc finger pseudogene, heat shock 70kD protein 8 (HSPA8)
             pseudogene and a nucleophosmin (nucleolar phosphoprotein
             B23, numatrin (NPM1)) pseudogene, complete sequence
          Length = 157860

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   gttggagggcaatggcgcaa 281
             ||||||||||||||||||||
Sbjct: 19804 gttggagggcaatggcgcaa 19785

>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154495

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 643    tcaagaagataaaaatcatt 662
              ||||||||||||||||||||
Sbjct: 126468 tcaagaagataaaaatcatt 126449

>gb|AC102282.20| Mus musculus chromosome 5, clone RP24-319P5, complete sequence
          Length = 175569

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 640    taatcaagaagataaaaatc 659
              ||||||||||||||||||||
Sbjct: 164075 taatcaagaagataaaaatc 164056

>gb|AC098852.2| Homo sapiens BAC clone RP11-123E11 from 4, complete sequence
          Length = 193927

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aaattggggatttatttgtt 31
             ||||||||||||||||||||
Sbjct: 27685 aaattggggatttatttgtt 27704

>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 649    agataaaaatcattggggta 668
              ||||||||||||||||||||
Sbjct: 275500 agataaaaatcattggggta 275519

>dbj|AK173945.1| Ciona intestinalis cDNA, clone:ciad028l23, full insert sequence
          Length = 486

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 396 gcaagaagaactcgcagcgcagct 419
           ||||||||||||||||| ||||||
Sbjct: 189 gcaagaagaactcgcagagcagct 212

>emb|BX000344.15| Mouse DNA sequence from clone RP24-88L6 on chromosome 2, complete
             sequence
          Length = 118767

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   atcagcttcttctgcaatct 181
             ||||||||||||||||||||
Sbjct: 80807 atcagcttcttctgcaatct 80826

>gb|AC154304.1| Mus musculus BAC clone RP24-491H15 from 16, complete sequence
          Length = 169500

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   ttctccctttaggatggcct 234
             ||||||||||||||||||||
Sbjct: 61351 ttctccctttaggatggcct 61332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,259,799
Number of Sequences: 3902068
Number of extensions: 5259799
Number of successful extensions: 109249
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109162
Number of HSP's gapped (non-prelim): 79
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)