>YMP2_CAEEL (Q10946) Hypothetical protein B0361.2|
          Length = 460

 Score = 78.6 bits (192), Expect(2) = 1e-21
 Identities = 37/86 (43%), Positives = 52/86 (60%)
 Frame = -2

Query: 486 NLRQCIPENFAYFHVEFGLDRGFVHVIDDESKFGAGFGLNVLRGVLRLPGEDMHRRRRHE 307
           +LR+ IP+ F+YF V+FGL  GF HVI+    F + F   ++ G+L LP +   R+R  +
Sbjct: 371 DLRRQIPKGFSYFAVDFGLSNGFAHVIESHDHFPSTFATEIIAGMLDLPPKKW-RKRETD 429

Query: 306 SMDNQKQAVAGFMKDWEPFDWTKQLE 229
            M  QK     F K WEP DWTK+L+
Sbjct: 430 EMSKQKSRAENFKKLWEPVDWTKRLK 455



 Score = 44.7 bits (104), Expect(2) = 1e-21
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -1

Query: 637 VKQQRHCMIECIPVPCEVSNKAPMYFKKAIDEAEEEWSQHEMKKLIPT 494
           V    H  IEC+PV  E+ + A +YFKKAI+E E E+  +  KKLI T
Sbjct: 324 VDSNPHVFIECVPVEQEIGDMASIYFKKAINECEGEYMDN--KKLIET 369

>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19|
          Length = 639

 Score = 47.4 bits (111), Expect(2) = 3e-13
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -2

Query: 480 RQCIPENFAYFHVEFGLDRGFVHVIDDESKFGAGFGL--NVLRGVLRLPGEDMHRRRRHE 307
           R+ + +   YFHV F +D G+ HV++DE  +G    +   V   +L LP E + R+    
Sbjct: 555 RKMMVKELGYFHVWFSIDGGYGHVVEDEKAWGRHDQVPRQVFASMLNLPPEVIRRKGSWT 614

Query: 306 SMDNQKQAVAGFMKDWEPFDWTKQL 232
              + ++ +  F   +E FDWTK L
Sbjct: 615 GKKDPREDM--FRSRFEKFDWTKGL 637



 Score = 47.4 bits (111), Expect(2) = 3e-13
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 622 HCMIECIPVPCEVSNKAPMYFKKAIDEAEEEWSQHEMKKLIPT 494
           H  IECIPV   + + AP YF++A+  ++EEWSQH  +K+I T
Sbjct: 502 HTAIECIPVSKRILSLAPAYFREALSTSDEEWSQH--RKIIDT 542

>DAPD_AGRT5 (Q8UIC6) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate|
           N-succinyltransferase (EC 2.3.1.117)
           (Tetrahydrodipicolinate N-succinyltransferase) (THP
           succinyltransferase) (Tetrahydropicolinate succinylase)
          Length = 284

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 295 VIHGLVPPATVHVLPWQPEHPSEYIQPETSTELALIVYHVDEPAVQTKLHVEVGEVLRD 471
           + +G VPP +V V    P  P    +P  S   A+IV  VDE   +T+    + E+LRD
Sbjct: 229 ITYGEVPPYSVVVAGTMPGKPFPNGEPGPSLYCAVIVKRVDE---KTRSKTGINELLRD 284

>MYPT2_HUMAN (O60237) Protein phosphatase 1 regulatory subunit 12B (Myosin|
           phosphatase-targeting subunit 2) (Myosin phosphatase
           target subunit 2)
          Length = 982

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 CLRRRCMSSPGNRSTPRSTFSPKPAPNLLSSSITWTNPRSRPNS 442
           C R RC + P   +TP S  + +P+    SS + WTN  S P+S
Sbjct: 718 CHRLRCPAQPDKPTTPASPSTSRPS-LYTSSHLLWTNRFSVPDS 760

>LBR_RAT (O08984) Lamin-B receptor (Integral nuclear envelope inner membrane|
           protein) (NBP60)
          Length = 620

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 360 GVHSARNQHRTCSHRLSRGRTRGPDQTPRGSRRS 461
           G  S+    R  S   SR R+R P + P+GSRRS
Sbjct: 66  GSTSSSPSRRRSSRSRSRSRSRSPGRAPKGSRRS 99

>PTXB_PSEST (O69052) Probable phosphite transport system binding protein ptxB|
           precursor
          Length = 287

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
 Frame = +1

Query: 304 GLVPPATVHVLPWQPEHPS------EYIQPETSTELALIVYHVDEPAVQTKLHVEVGEVL 465
           GL+ P+ V VL +  E+P         + PE  T++  +   +D+P V      E    +
Sbjct: 206 GLIDPSKVKVLGYSGEYPQYPWAMRSNLSPELKTKVRDVFVGIDDPEVLRNFKAEAFAPI 265

Query: 466 RDALPQVTRSL 498
            DA   V R++
Sbjct: 266 TDADYDVIRNM 276

>ZYX_CHICK (Q04584) Zyxin|
          Length = 542

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/87 (24%), Positives = 30/87 (34%)
 Frame = +1

Query: 313 PPATVHVLPWQPEHPSEYIQPETSTELALIVYHVDEPAVQTKLHVEVGEVLRDALPQVTR 492
           PPA     P  P  P        + ++        E  +  K HVE+    RD  P    
Sbjct: 114 PPAPDEAFPSPPPPPPPMFDEGPALQIPPGSTGSVEKPLAPKAHVEISSAPRDPTPPFPS 173

Query: 493 SLE*ASSSHAATIPPQLRRLPS*STWA 573
                 S   ++ PP L   P+ + WA
Sbjct: 174 KFTPKPSGTLSSKPPGLDSTPAPAPWA 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,657,728
Number of Sequences: 219361
Number of extensions: 2210318
Number of successful extensions: 6589
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6580
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)