ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37f06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 967 Score = 1185 bits (598), Expect = 0.0 Identities = 681/704 (96%), Gaps = 6/704 (0%) Strand = Plus / Minus Query: 33 ttgtgcacacatgaatccttga-gggaaatcgacctcttagttcatccatcctcatgtac 91 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 949 ttgtgcacacatgaatccttgaagggaaatcgacctcttagttcatccatcctcatgtac 890 Query: 92 aaatcaaagaaacacacatgcatgccctggatcggtctctacacggtgcttccctgagga 151 ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 889 aaatcaaagaaacacacatgcatgccctg-atcggtctctacatggtgcatccctgagga 831 Query: 152 gatt-ccattaaattcgccgatcggtcatgtatatttatgcgacactgaaggatcctgcg 210 ||| |||||||| |||||| |||||| |||||||||||||||| ||||||||||||||| Sbjct: 830 aatttccattaaactcgccggtcggtcgtgtatatttatgcgacgctgaaggatcctgcg 771 Query: 211 gcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttg 270 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 770 gcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctcg---ttgcgccttg 714 Query: 271 cagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 cagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcg 654 Query: 331 tctccgtccgcggtcctggtgagcaccgttatgctgtagtactgcttaccgtccaccacc 390 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 tctccgtccgcggtcctcgtgagcaccgttatgctgtagtactgcttaccgtccaccacc 594 Query: 391 ggcgccgagctctcgagcacgttggccgtcgccacagcgtctgactcgaagccgccctcg 450 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 593 ggcgccgagctctccagcacgttcgccgtcgccacagcgtctgactcgaacccaccctcg 534 Query: 451 gagtcggtcttgccgccgtaggactgctggccgaggaggaagccgacctgggagaggaac 510 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 gagtcggtcttgccaccgtaggactgctggccgaggaggaagccgacctgggagaggaac 474 Query: 511 tcctcaggggaaccgtagtcggtgatggtcttcttggtggtggggttgattataacggag 570 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 473 tcctcaggggaaccgtagtcggtgatggtcttcttggtagtggggttgattataacggag 414 Query: 571 aggttgctggtggcgtcgaagttgtcctcgtaacggagcacctgcccagggaactcacgc 630 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 413 aggttgctggtggcgtcgaagttgtcctcgtagcggagcacctgcccagggaactcacgc 354 Query: 631 tccttgctggggttccacttggccgggatcatcagtttgaacccctcgccgctgtacgcc 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 tccttgctggggttccacttggccgggatcatcagtttgaacccctcgccgctgtacgcc 294 Query: 691 acgaagtccgtgttcttcttcgccttgccgaacacgttcgctgc 734 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 293 acgaagtccgtgttcttcttcgccttgccgaacacgttggctgc 250
>ref|NM_186247.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1114 Score = 539 bits (272), Expect = e-150 Identities = 476/544 (87%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 872 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 813 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 812 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 753 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 752 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 693 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 692 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 633 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 632 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 573 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||| Sbjct: 572 agaagtcgacctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttgg 513 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 512 tggtggggttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcgga 453 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 452 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 393 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| || | ||| ||||||||| |||| | ||| |||||||||| Sbjct: 392 tgaacccctcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgt 333 Query: 728 tcgc 731 |||| Sbjct: 332 tcgc 329
>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full insert sequence Length = 1078 Score = 539 bits (272), Expect = e-150 Identities = 476/544 (87%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 828 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 769 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 768 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 709 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 708 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 649 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 648 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 589 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 588 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 529 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||| Sbjct: 528 agaagtcgacctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttgg 469 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 468 tggtggggttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcgga 409 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 408 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 349 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| || | ||| ||||||||| |||| | ||| |||||||||| Sbjct: 348 tgaacccctcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgt 289 Query: 728 tcgc 731 |||| Sbjct: 288 tcgc 285
>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full insert sequence Length = 1114 Score = 539 bits (272), Expect = e-150 Identities = 476/544 (87%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 872 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 813 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 812 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 753 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 752 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 693 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 692 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 633 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 632 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 573 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||| Sbjct: 572 agaagtcgacctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttgg 513 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 512 tggtggggttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcgga 453 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 452 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 393 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| || | ||| ||||||||| |||| | ||| |||||||||| Sbjct: 392 tgaacccctcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgt 333 Query: 728 tcgc 731 |||| Sbjct: 332 tcgc 329
>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete cds Length = 1107 Score = 539 bits (272), Expect = e-150 Identities = 476/544 (87%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 847 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 788 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 787 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 728 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 727 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 668 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 667 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 608 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 607 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 548 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||| Sbjct: 547 agaagtcgacctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttgg 488 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 487 tggtggggttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcgga 428 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 427 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 368 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| || | ||| ||||||||| |||| | ||| |||||||||| Sbjct: 367 tgaacccctcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgt 308 Query: 728 tcgc 731 |||| Sbjct: 307 tcgc 304
>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II, complete cds Length = 1008 Score = 507 bits (256), Expect = e-140 Identities = 475/544 (87%), Gaps = 3/544 (0%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 786 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 727 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 726 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 667 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| | |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 666 tcagctggtgcttgcg-ccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 608 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 ||||| |||| || ||||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 607 agtac-gcttccc-tccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 550 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 549 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 490 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||| Sbjct: 489 agaagtcgacctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttgg 430 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 429 tggtggggttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcgga 370 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 369 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 310 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| || | ||| ||||||||| |||| | ||| |||||||||| Sbjct: 309 tgaacccctcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgt 250 Query: 728 tcgc 731 |||| Sbjct: 249 tcgc 246
>gb|AY103732.1| Zea mays PCO073407 mRNA sequence Length = 1083 Score = 450 bits (227), Expect = e-123 Identities = 452/527 (85%) Strand = Plus / Minus Query: 208 gcggcgttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgcc 267 ||||| |||||||| |||| ||||||||||||||||||||||||| ||||| |||||| Sbjct: 830 gcggccttctcgactcccttcctggcgcccttgaaccacctcttgtcgccggcctgcgcc 771 Query: 268 ttgcagacgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccctccc 327 ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||| || ||| Sbjct: 770 ttgcagatgtagagcttgccgtcggagacggtggccgcgatgagctggtgcttgccgccc 711 Query: 328 tcgtctccgtccgcggtcctggtgagcaccgttatgctgtagtactgcttaccgtccacc 387 ||||| |||||||| |||||||||||||| | | | |||||||||||| ||||| | | Sbjct: 710 tcgtcgccgtccgccgtcctggtgagcacggacacggcgtagtactgcttgccgtcgatc 651 Query: 388 accggcgccgagctctcgagcacgttggccgtcgccacagcgtctgactcgaagccgccc 447 || || | |||||||| || |||||||| || ||||| ||| | | |||||| |||||| Sbjct: 650 acgggggtggagctctccaggacgttggcggtggccacggcgccggtctcgaacccgccc 591 Query: 448 tcggagtcggtcttgccgccgtaggactgctggccgaggaggaagccgacctgggagagg 507 ||||||||||||||||||||||||| |||| |||||| ||| || |||||||||||||| Sbjct: 590 tcggagtcggtcttgccgccgtaggcctgcctgccgagcaggtagtcgacctgggagagg 531 Query: 508 aactcctcaggggaaccgtagtcggtgatggtcttcttggtggtggggttgattataacg 567 |||||||| || || |||||||||| |||||||||||||| ||||| | ||| || ||| Sbjct: 530 aactcctcgggagagccgtagtcggcgatggtcttcttggacgtgggctggatgatgacg 471 Query: 568 gagaggttgctggtggcgtcgaagttgtcctcgtaacggagcacctgcccagggaactca 627 || | ||||||| |||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 470 gacacgttgctgttggcgtcgaagttgtcctcgtagcggagcacctgcccggggaactcc 411 Query: 628 cgctccttgctggggttccacttggccgggatcatcagtttgaacccctcgccgctgtac 687 ||||||||||||||||||||||||| |||||||| ||| ||||| || |||||| ||| Sbjct: 410 cgctccttgctggggttccacttggacgggatcagcagcttgaagccgtcgccgacgtag 351 Query: 688 gccacgaagtccgtgttcttcttcgccttgccgaacacgttcgctgc 734 | | | | |||||||||||||| | ||||||||||||||| ||||| Sbjct: 350 gagatgtactccgtgttcttcttggtcttgccgaacacgttggctgc 304
>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds Length = 1031 Score = 389 bits (196), Expect = e-105 Identities = 457/544 (84%) Strand = Plus / Minus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| ||||||| |||||| |||||||||||||||||| Sbjct: 830 atgcgacgctgaaggagctggctgcgctctcgacaaacttcctggcgcccttgaaccacc 771 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| |||| ||||||||||||| || |||||||||||| ||||||||| |||| Sbjct: 770 tcttgtcgccgggctgcgccttgcagatgttcagcttgccgtcgttgacggtggccgtga 711 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 710 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 651 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 ||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 650 ggtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 591 Query: 428 cgtctgactcgaagccgccctcggagtcggtcttgccgccgtaggactgctggccgagga 487 |||| ||||| || || |||||||| || ||||||||| ||||| ||||| ||| || | Sbjct: 590 cgtccgactcaaacccaccctcggaatctgtcttgccggagtaggcctgcttgccaagca 531 Query: 488 ggaagccgacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttgg 547 |||| |||| |||| |||||| || | ||||| ||| | |||| || ||||||||||| Sbjct: 530 agaagtcgacttgggggaggaattcttggggggagccgaactcggcgacggtcttcttgg 471 Query: 548 tggtggggttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacgga 607 ||| |||||||||||| ||||||| ||||||| ||||| |||||| || | ||| |||| Sbjct: 470 tgggggggttgattatgacggagacgttgctgtcggcgtggaagttctctttgtagcgga 411 Query: 608 gcacctgcccagggaactcacgctccttgctggggttccacttggccgggatcatcagtt 667 | ||||| || |||||||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct: 410 ggacctgtccggggaactcgcgctccttgctggggttccacttggacgggatcagcagct 351 Query: 668 tgaacccctcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgt 727 ||||||||||||||||||| | | ||| |||||||| | || | ||| |||||||||| Sbjct: 350 tgaacccctcgccgctgtaggggatgaactccgtgtttgttttgggcttcccgaacacgt 291 Query: 728 tcgc 731 |||| Sbjct: 290 tcgc 287
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 278 bits (140), Expect = 2e-71 Identities = 212/236 (89%) Strand = Plus / Plus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||||| |||||||||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2169927 acctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttggtggtgggg 2169986 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacggagcacctgc 615 |||||||| ||||||| ||||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 2169987 ttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcggaggacctgt 2170046 Query: 616 ccagggaactcacgctccttgctggggttccacttggccgggatcatcagtttgaacccc 675 || |||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 2170047 ccggggaactcgcgctccttgctggggttccacttggacgggatcagcagcttgaacccc 2170106 Query: 676 tcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgttcgc 731 ||||||||||| || | ||| ||||||||| |||| | ||| |||||||||||||| Sbjct: 2170107 tcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgttcgc 2170162 Score = 250 bits (126), Expect = 6e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 2169273 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 2169332 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 2169333 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 2169392 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 2169393 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 2169452 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 2169453 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 2169512 Query: 428 cgtctgactc 437 |||| ||||| Sbjct: 2169513 cgtccgactc 2169522
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 278 bits (140), Expect = 2e-71 Identities = 212/236 (89%) Strand = Plus / Plus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||||| |||||||||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct: 37829 acctgggcgaggaactcctcgggggagccgaactcggtgatggtcttcttggtggtgggg 37888 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacggagcacctgc 615 |||||||| ||||||| ||||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 37889 ttgattatgacggagacgttgctgttggcgtcgaagttgtcctcgtagcggaggacctgt 37948 Query: 616 ccagggaactcacgctccttgctggggttccacttggccgggatcatcagtttgaacccc 675 || |||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 37949 ccggggaactcgcgctccttgctggggttccacttggacgggatcagcagcttgaacccc 38008 Query: 676 tcgccgctgtacgccacgaagtccgtgttcttcttcgccttgccgaacacgttcgc 731 ||||||||||| || | ||| ||||||||| |||| | ||| |||||||||||||| Sbjct: 38009 tcgccgctgtaggcgatgaactccgtgttcgtcttgggcttcccgaacacgttcgc 38064 Score = 250 bits (126), Expect = 6e-63 Identities = 219/250 (87%) Strand = Plus / Plus Query: 188 atgcgacactgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccacc 247 ||||||| |||||||| | || ||| |||||||||||||| |||||||||||||||||| Sbjct: 37175 atgcgacgctgaaggagctggctgcgctctcgacgaacttcctggcgcccttgaaccacc 37234 Query: 248 tcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcgacggtggcggtga 307 ||||||| ||||| ||||||||||||| ||| |||||||||||| ||||||||| |||| Sbjct: 37235 tcttgtcgccggcctgcgccttgcagatgtacagcttgccgtcgttgacggtggccgtga 37294 Query: 308 tgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagcaccgttatgctgt 367 | ||||||||||| || |||||||| |||||||| ||||| || |||||||||| ||||| Sbjct: 37295 tcagctggtgcttgccgccctcgtcgccgtccgccgtcctcgtcagcaccgttacgctgt 37354 Query: 368 agtactgcttaccgtccaccaccggcgccgagctctcgagcacgttggccgtcgccacag 427 |||||||||| || |||||||||||||||||||||| || | ||| ||||||||||| | Sbjct: 37355 agtactgcttccctcccaccaccggcgccgagctctccaggatgttcgccgtcgccaccg 37414 Query: 428 cgtctgactc 437 |||| ||||| Sbjct: 37415 cgtccgactc 37424
>gb|AF037458.1|AF037458 Fritillaria agrestis photosystem II oxygen evolving complex protein 2 precursor (psbP) mRNA, complete cds Length = 970 Score = 87.7 bits (44), Expect = 5e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 223 aacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagc 282 ||||||||||| ||||||||||| |||||||| ||||| || |||||||||| ||||||| Sbjct: 767 aacttcttggctcccttgaaccatctcttgtccccggcctgtgccttgcagatgtagagc 708 Query: 283 ttgccgtcggcgacggtggcggtgatgagctggtgcttccctccctcgtctccgtccgcg 342 || || || | ||| || |||| ||| | |||||||| ||||| || |||||||| || Sbjct: 707 ttaccatctgtgacagttgcggagataacatggtgcttgcctccttcatctccgtcagca 648 Query: 343 gtcctggt 350 |||||||| Sbjct: 647 gtcctggt 640 Score = 73.8 bits (37), Expect = 7e-10 Identities = 121/149 (81%) Strand = Plus / Minus Query: 574 ttgctggtggcgtcgaagttgtcctcgtaacggagcacctgcccagggaactcacgctcc 633 ||||||||| ||||||||||||||||||| | |||||||| || |||||||| |||| Sbjct: 416 ttgctggtgacgtcgaagttgtcctcgtaccttagcacctgacctgggaactcgacctcc 357 Query: 634 ttgctggggttccacttggccgggatcatcagtttgaacccctcgccgctgtacgccacg 693 || || ||||||||||| || || |||| ||| ||||| || || ||| |||| | | | Sbjct: 356 ttactcgggttccactttgctggtatcaacagattgaatccatcaccggtgtatggaagg 297 Query: 694 aagtccgtgttcttcttcgccttgccgaa 722 ||||| ||||| |||||||||| ||||| Sbjct: 296 aagtctgtgttagtcttcgcctttccgaa 268 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 |||||||||||||| |||| |||||||| ||||| | |||||||| ||||||| Sbjct: 488 gagaggaactcctctggggtgccgtagtcagtgattgacttcttggaggtgggg 435
>emb|X05511.1|SOOEC23 Spinach mRNA 23 kDa protein of the photosynthetic oxygen-evolving complex (OEC) Length = 1000 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 806 tctcgacaaacttcttagcacccttgaaccatctcttgtctccagcttgagccttgcaga 747 Query: 275 cgtagagcttgccgtc 290 ||| ||||| ||||| Sbjct: 746 tgtaaagcttaccgtc 731 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Minus Query: 499 tgggagaggaactcctcaggggaaccgtagtcggtgatgg 538 ||||||||||| || |||||||||||| |||| ||||||| Sbjct: 522 tgggagaggaaatcttcaggggaaccgaagtctgtgatgg 483 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 574 ttgctggtggcgtcgaagttgtcctcgta 602 ||||||||||| || |||||||||||||| Sbjct: 447 ttgctggtggcatcaaagttgtcctcgta 419
>emb|X78816.1|NPOEC23 N.pseudonarcissus mRNA for OEC 23 Length = 932 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 574 ttgctggtggcgtcgaagttgtcctcgtaacggagcacctgcccagggaactcacgctcc 633 |||||||||| ||||||||||| ||||| || | |||||| |||||||||||| |||| Sbjct: 442 ttgctggtggtatcgaagttgtcttcgtaccgcaacacctgaccagggaactcaacctcc 383 Query: 634 ttgctggggttccactt 650 ||||| ||||||||||| Sbjct: 382 ttgctcgggttccactt 366 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 223 aacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagc 282 ||||||||||| ||||||||||| |||||||| || || || || ||||||| ||| ||| Sbjct: 793 aacttcttggctcccttgaaccatctcttgtcgccagcctgagctttgcagatgtaaagc 734 Query: 283 tt 284 || Sbjct: 733 tt 732
>ref|NM_100545.2| Arabidopsis thaliana PSBP (OXYGEN-EVOLVING ENHANCER PROTEIN 2); calcium ion binding AT1G06680 (PSBP) mRNA, complete cds Length = 1085 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 824 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 765 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 764 tgtaaagctt 755 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 543 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 493
>gb|BT015556.1| Arabidopsis thaliana At1g06680 mRNA sequence Length = 561 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 532 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 473 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 472 tgtaaagctt 463 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 251 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 201
>gb|AY096487.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving complex (OEC) (At1g06680) mRNA, complete cds Length = 823 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 763 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 704 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 703 tgtaaagctt 694 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 482 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 432
>gb|AY074308.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving comlex protein (At1g06680) mRNA, complete cds Length = 1046 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 820 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 761 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 760 tgtaaagctt 751 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 539 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 489
>gb|AY070469.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 937 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 818 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 759 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 758 tgtaaagctt 749 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 537 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 487
>gb|AY056416.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 935 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 818 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 759 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 758 tgtaaagctt 749 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 537 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 487
>dbj|AK221243.1| Arabidopsis thaliana mRNA for PSII-P protein, partial cds, clone: RAFL24-01-M24 Length = 292 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 72 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 13 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 12 tgtaaagctt 3
>emb|BX813852.1|CNS0AEBT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 806 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 747 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 746 tgtaaagctt 737 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 525 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 475
>emb|BX813677.1|CNS0AE2Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 544 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 485 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 484 tgtaaagctt 475 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 263 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 213
>emb|BX815468.1|CNS0ACDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 777 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 718 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 717 tgtaaagctt 708 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 496 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 446
>emb|BX814211.1|CNS0ACB9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 804 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 745 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 744 tgtaaagctt 735 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 523 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 473
>emb|BX814208.1|CNS0ACB8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 450 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 391 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 390 tgtaaagctt 381 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 169 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 119
>emb|BX815307.1|CNS0ABGV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1014 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 804 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 745 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 744 tgtaaagctt 735 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 517 gagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 473
>emb|BX815232.1|CNS0ABDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 806 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 747 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 746 tgtaaagctt 737 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 525 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 475
>emb|BX814903.1|CNS0AAGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 570 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 374 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 315 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 314 tgtaaagctt 305 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 93 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 43
>emb|BX814881.1|CNS0AAH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 461 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 402 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 401 tgtaaagctt 392 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 180 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 130
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 4853 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 4912 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 4913 tgtaaagctt 4922 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 5478 gacctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 5529
>gb|AY087305.1| Arabidopsis thaliana clone 33922 mRNA, complete sequence Length = 1067 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 825 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 766 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 765 tgtaaagctt 756 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 544 acctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 494
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 85939 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 85998 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 85999 tgtaaagctt 86008 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 86564 gacctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 86615
>emb|X98108.1|ATPSPB A.thaliana psbP gene Length = 1683 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 215 tctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 1508 tctcgacaaatttcctggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 1449 Query: 275 cgtagagctt 284 ||| ||||| Sbjct: 1448 tgtaaagctt 1439 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Minus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| || || |||||||| || ||||||| ||||||| Sbjct: 883 gacctgagagaggaactcttcgggagaaccgtaatcagtgatggacttcttg 832
>gb|AF545584.1| Xerophyta humilis PsbP mRNA, partial cds Length = 732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 147/185 (79%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 |||| ||| |||||||| ||||||||||| |||| ||||||| ||||||| ||| || Sbjct: 467 accttggaaaggaactcttcaggggaaccaaagtcagtgatggacttcttgtcggttggc 408 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcgtaacggagcacctgc 615 | || || |||| ||||||||| |||| ||||||||||||||||| || ||||| || Sbjct: 407 tggaccatgacggcaaggttgctgttggcatcgaagttgtcctcgtaccgcagcacttga 348 Query: 616 ccagggaactcacgctccttgctggggttccacttggccgggatcatcagtttgaacccc 675 || ||| ||||| ||| ||||| |||||| || | |||||||| || |||||||| Sbjct: 347 cctgggtactcaacctctttgctaaagttccatttcgacgggatcaacaccttgaaccca 288 Query: 676 tcgcc 680 ||||| Sbjct: 287 tcgcc 283 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 235 cccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcg 294 ||||| |||||||||||||| || || || ||||||| | ||||||||| || || | Sbjct: 728 cccttaaaccacctcttgtcaccagcctggaccttgcaaatgtagagcttcccatccgac 669 Query: 295 acggtggcggtgatgagctggtgcttccctccctcgtctccgtccgcggtcctggtgagc 354 ||||| |||| ||| | |||||||||||| || || || ||||| || ||||| ||||| Sbjct: 668 acggttgcggcgataatctggtgcttcccaccttcatccccgtcggcagtcctcgtgaga 609 Query: 355 accgttatgctgtagta 371 |||| |||| ||||||| Sbjct: 608 accgatatgttgtagta 592
>emb|X63007.1|LEPSBXMR L.esculentum psbX mRNA for photosystem II 23 kDa protein Length = 997 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 ||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct: 560 gagaggaactcttcaggggagccgtagtcggtgatggacttcttg 516
>emb|Y08886.1|BJ23OESP2 B.juncea mRNA for 23 kD protein of oxygen evolving system of photosystem II Length = 754 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 229 ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 611 ttggctcccttgaaccacctcttgtctccagcttgtgctttgcaga 566 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| ||||| |||||||| || ||||||| ||||||| Sbjct: 345 gacctgagagaggaactcttcaggagaaccgtaatcagtgatggacttcttg 294
>emb|X99320.1|STPSBPGEN S.tuberosum mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 1089 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||||| || |||||||| |||||||||||||||| ||||||| Sbjct: 534 gagaggaattcttcaggggagccgtagtcggtgatggacttcttg 490 Score = 44.1 bits (22), Expect = 0.64 Identities = 88/110 (80%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgcag 273 ||||| || ||||| ||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 822 ttctccacaaactttttggcacccttaaaccatctcttgtcaccagcttgtgccttgcaa 763 Query: 274 acgtagagcttgccgtcggcgacggtggcggtgatgagctggtgcttccc 323 | ||| || ||||| || || ||||| ||||| | |||||||||||| Sbjct: 762 atgtaaagtttgccatcattcactgtggctgtgatcaactggtgcttccc 713
>gb|AY486007.1| Thlaspi caerulescens oxygen-evolving system subunit-like mRNA, partial sequence Length = 861 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| ||||| |||||||| || ||||||| ||||||| Sbjct: 483 gacctgagagaggaactcttcaggagaaccgtaatcagtgatggacttcttg 432
>emb|X17213.1|SA23KDP2 S.alba psbP gene for 23 kDa polypeptide of the oxygen-evolving complex of photosystem II Length = 1936 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| ||||| |||||||| || ||||||| ||||||| Sbjct: 911 gacctgagagaggaactcttcaggagaaccgtaatcagtgatggacttcttg 860 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 229 ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgcc 287 ||||| || |||||||||||||||||||| ||||| || ||||||| || |||||||| Sbjct: 1424 ttggctcctttgaaccacctcttgtctccagcttgtgctttgcagatataaagcttgcc 1366
>emb|Y07498.1|SAOES23 Sinapis alba mRNA fragment for 23kD subunit of oxygen evolving system of photosystem II Length = 867 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 495 gacctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||| ||||||||||| ||||| |||||||| || ||||||| ||||||| Sbjct: 439 gacctgagagaggaactcttcaggagaaccgtaatcagtgatggacttcttg 388 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 229 ttggcgcccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgcc 287 ||||| || |||||||||||||||||||| ||||| || ||||||| || |||||||| Sbjct: 705 ttggctcctttgaaccacctcttgtctccagcttgtgctttgcagatataaagcttgcc 647
>ref|NM_128632.2| Arabidopsis thaliana calcium ion binding AT2G30790 mRNA, complete cds Length = 786 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 758 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 700 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 476 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 417 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 416 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 372
>gb|BT015608.1| Arabidopsis thaliana At2g30790 mRNA sequence Length = 581 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 553 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 495 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 271 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 212 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 211 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 167
>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete sequence Length = 79574 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 72957 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 73015 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Plus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 73411 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 73470 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 73471 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 73515
>gb|BT022094.1| Arabidopsis thaliana At2g30790 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 765 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 707 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 483 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 424 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 423 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 379
>dbj|AK175934.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-60-I02 Length = 936 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 511 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 452 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 451 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 407
>dbj|AK175821.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-42-D16 Length = 936 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 511 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 452 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 451 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 407
>dbj|AK175738.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-28-H07 Length = 936 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 214 ttctcgacgaacttcttggcgcccttgaaccacctcttgtctccggcttgcgccttgca 272 ||||| ||||||||| | || || |||||||||||||||||||| ||||| || ||||| Sbjct: 793 ttctcaacgaacttcctagctcctttgaaccacctcttgtctcctgcttgagctttgca 735 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatggtcttcttggtggtgggg 555 ||||| |||||||||| ||||| |||||||| || ||||||| |||||| || || Sbjct: 511 acctgagagaggaactgttcaggagaaccgtaatcagtgatggatttcttgtctgtagga 452 Query: 556 ttgattataacggagaggttgctggtggcgtcgaagttgtcctcg 600 |||| || || |||| |||||||||||||| |||||||||||| Sbjct: 451 gtgatcatgacagagacattgctggtggcgtcaaagttgtcctcg 407
>dbj|AB043961.1| Bruguiera gymnorhiza mRNA for oxygen evolving enhancer protein 2, partial cds Length = 482 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 496 acctgggagaggaactcctcaggggaaccgtagtcggtgatgg 538 ||||||||||| || | |||||||||||| ||||||||||||| Sbjct: 224 acctgggagagaaattgctcaggggaaccatagtcggtgatgg 182
>dbj|AB236819.1| Trifolium pratense RNA for putative PSII-P protein, partial cds, clone: C214 Length = 915 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 235 cccttgaaccacctcttgtctccggcttgcgccttgcagacgtagagcttgccgtcggcg 294 ||||| ||||||||||||||||| ||||| |||||||| | ||| || ||||| || Sbjct: 739 cccttaaaccacctcttgtctccagcttgagccttgcaaatgtatagtttgccatcattt 680 Query: 295 acggtggcggtgatgagctggtgctt 320 ||||| ||||| || ||||||||||| Sbjct: 679 acggttgcggtaatcagctggtgctt 654 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 505 aggaactcctcaggggaaccgtagtcggtgatggtcttctt 545 ||||||| ||||| ||||||||||| ||||||| |||||| Sbjct: 469 aggaactgttcaggtgaaccgtagtcagtgatggacttctt 429
>dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide of the oxygen-evolving complex of photosystem II, complete cds Length = 1023 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 241 aaccacctcttgtctccggcttgcgccttgca 272 ||||||||||||||||| ||||| |||||||| Sbjct: 751 aaccacctcttgtctcctgcttgtgccttgca 720
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 cggcgacggtggcggtgatgagctggtgcttc 321 ||||||||| |||||||| ||||||||||||| Sbjct: 4994412 cggcgacggcggcggtgaggagctggtgcttc 4994443
>emb|X15552.1|PS23KDAP Pea mRNA for 23kDa polypeptide of the oxygen evolving complex of photosystem II Length = 987 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Minus Query: 235 cccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||| |||||||||||||| || ||||| |||||||||| Sbjct: 759 cccttaaaccacctcttgtcaccagcttgagccttgcaga 720
>gb|M15187.1|CREOEE2A C.reinhardtii oxygen-evolving enhancer protein 2 (OEE2) mRNA, complete cds Length = 1552 Score = 48.1 bits (24), Expect = 0.041 Identities = 60/72 (83%) Strand = Plus / Minus Query: 582 ggcgtcgaagttgtcctcgtaacggagcacctgcccagggaactcacgctccttgctggg 641 ||||||||||||||||||||| || || | | || ||||| || |||||||||||| Sbjct: 489 ggcgtcgaagttgtcctcgtagcgcaggatcacgccggggaagtcgttctccttgctggg 430 Query: 642 gttccacttggc 653 |||||||||||| Sbjct: 429 gttccacttggc 418
>dbj|D13296.1|PEAPSBP Pisum sativum mRNA for precursor for 23-kDa protein of photosystem II, complete cds Length = 1026 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Minus Query: 235 cccttgaaccacctcttgtctccggcttgcgccttgcaga 274 ||||| |||||||||||||| || ||||| |||||||||| Sbjct: 803 cccttaaaccacctcttgtcaccagcttgagccttgcaga 764
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 264 cgccttgcagacgtagagcttgccgtcggcg 294 |||||||||| ||||| |||||||||||||| Sbjct: 3966281 cgccttgcagtcgtagggcttgccgtcggcg 3966251
>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 199396 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 473 actgctggccgaggaggaagcc 494 |||||||||||||||||||||| Sbjct: 39205 actgctggccgaggaggaagcc 39184
>ref|NM_141003.2| Drosophila melanogaster CG3634-RA (CG3634), mRNA Length = 2312 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 actgctggccgaggaggaagcc 494 |||||||||||||||||||||| Sbjct: 873 actgctggccgaggaggaagcc 894
>gb|AY071424.1| Drosophila melanogaster RE50559 full length cDNA Length = 2327 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 actgctggccgaggaggaagcc 494 |||||||||||||||||||||| Sbjct: 873 actgctggccgaggaggaagcc 894
>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete sequence Length = 323816 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 473 actgctggccgaggaggaagcc 494 |||||||||||||||||||||| Sbjct: 179513 actgctggccgaggaggaagcc 179492
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 tccatcctcatgtacaaatca 97 ||||||||||||||||||||| Sbjct: 136776 tccatcctcatgtacaaatca 136756
>gb|AC026122.14| Homo sapiens 12 BAC RP11-902D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184834 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 495 gacctgggagaggaactcctc 515 ||||||||||||||||||||| Sbjct: 114423 gacctgggagaggaactcctc 114443
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes) Length = 355060 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 gagggaaatcgacctcttagttcat 77 ||||||||||||||||| ||||||| Sbjct: 304548 gagggaaatcgacctctaagttcat 304572
>gb|AC004824.3| Homo sapiens PAC clone RP1-20B21 from 1, complete sequence Length = 137506 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 gagggaaatcgacctcttagttcat 77 ||||||||||||||||| ||||||| Sbjct: 103537 gagggaaatcgacctctaagttcat 103513
>gb|AY952374.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 23 kDa subunit (psbP) mRNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||||||| ||||||||||| |||| ||||||| ||||||| Sbjct: 470 gagaggaactgttcaggggaaccaaagtcagtgatggacttcttg 426
>emb|X64348.1|NT23WOP2B N.tabacum mRNA for 23 kDa polypeptide of water-oxidizing complex of photosystem II Length = 742 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||||||| ||||||||||| |||| ||||||| ||||||| Sbjct: 304 gagaggaactgttcaggggaaccaaagtcagtgatggacttcttg 260
>emb|X62427.1|NTT232AF N.tabacum mRNA (T23-2AF) for PSII 23-kDa polypeptide Length = 1080 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 502 gagaggaactcctcaggggaaccgtagtcggtgatggtcttcttg 546 |||||||||| ||||||||||| |||| ||||||| ||||||| Sbjct: 576 gagaggaactgttcaggggaaccaaagtcagtgatggacttcttg 532 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,352,268 Number of Sequences: 3902068 Number of extensions: 5352268 Number of successful extensions: 113231 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112651 Number of HSP's gapped (non-prelim): 573 length of query: 734 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 711 effective length of database: 17,143,297,704 effective search space: 12188884667544 effective search space used: 12188884667544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
