ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 9e-77
2dbj|AK061105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 9e-77
3gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
6gb|DQ366745.1| Uncultured Prochlorococcus marinus clone HOT0M-9F... 66 2e-07
7ref|NM_116156.3| Arabidopsis thaliana APG3 (ALBINO AND PALE GREE... 60 1e-05
8gb|AY125535.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, co... 60 1e-05
9gb|AY090253.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, co... 60 1e-05
10emb|BX822806.1|CNS0A75S Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
11emb|BX823596.1|CNS0A6JA Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
12dbj|AB109893.1| Arabidopsis thaliana APG3 mRNA for Chloroplast R... 60 1e-05
13gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 50 0.009
14emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; se... 50 0.009
15gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 44 0.57
16gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 44 0.57
17gb|AE006475.1| Streptococcus pyogenes M1 GAS, section 4 of 167 o... 44 0.57
18gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 44 0.57
19gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 44 0.57
20gb|AE009955.1| Streptococcus pyogenes strain MGAS8232, section 3... 44 0.57
21gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 44 0.57
22dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 44 0.57
23gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 42 2.3
24gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complet... 42 2.3
25gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence 42 2.3
26gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromoso... 42 2.3
27gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromoso... 42 2.3
28emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in ... 42 2.3
29emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chro... 42 2.3
30gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 42 2.3
31ref|XM_478639.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
32gb|AE006294.1| Lactococcus lactis subsp. lactis IL1403 section 5... 40 8.9
33ref|XM_845266.1| PREDICTED: Canis familiaris similar to G protei... 40 8.9
34emb|CR450828.5| Zebrafish DNA sequence from clone CH211-199A5 in... 40 8.9
35gb|DQ366741.1| Uncultured Prochlorococcus marinus clone HOT0M-8C... 40 8.9
36emb|AL391863.21| Human DNA sequence from clone RP11-52J3 on chro... 40 8.9
37emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10... 40 8.9
38gb|AC090579.6| Homo sapiens chromosome 8, clone RP11-649G15, com... 40 8.9
39gb|AC006254.10| Homo sapiens 3p21.1-9 PAC RPCI5-966M1 (Roswell P... 40 8.9
40dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 8.9
41gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, comp... 40 8.9
42gb|AC093790.3| Homo sapiens BAC clone RP11-250F14 from 4, comple... 40 8.9
43gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Ca... 40 8.9
44emb|CR391943.6| Zebrafish DNA sequence from clone DKEY-15M21 in ... 40 8.9
45gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome... 40 8.9
46ref|NM_002638.2| Homo sapiens peptidase inhibitor 3, skin-derive... 40 8.9
47gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.9
48gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 40 8.9
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
50gb|DQ020202.1| Homo sapiens oxidation resistance 1 (OXR1) gene, ... 40 8.9
51dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 8.9
52dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, ... 40 8.9
53dbj|AK065606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
54dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
55emb|CR383669.17| Zebrafish DNA sequence from clone DKEY-25O1 in ... 40 8.9
56dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.9
57emb|CR925755.8| Zebrafish DNA sequence from clone CH211-138M24 i... 40 8.9
58gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 40 8.9
59dbj|AP000856.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.9
60emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, B... 40 8.9
61emb|CT033758.4| Mouse DNA sequence from clone RP23-430N23 on chr... 40 8.9
62emb|AL121677.3|HS6C10 Homo sapiens chromosome 21 Cosmid ICRFc103... 40 8.9
63dbj|AB061670.1| Prunus persica PpNR1 mRNA for nitrate reductase,... 40 8.9
64dbj|AP000431.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.9
65dbj|AP004285.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.9 
>dbj|AK066354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065L12, full
            insert sequence
          Length = 1608

 Score =  295 bits (149), Expect = 9e-77
 Identities = 317/373 (84%)
 Strand = Plus / Minus

                                                                        
Query: 280  gtggccatttcctccaagagttccttctgctccaaggcagcgcaggactgaatagctgac 339
            |||||||| ||||||| |||||||||||||||||  | ||  |||||||| | ||| |||
Sbjct: 1268 gtggccatctcctccaggagttccttctgctccattgaagaacaggactgcacagccgac 1209

                                                                        
Query: 340  tcgatatctcctaaaaggaagctagacaatatgaaattcatcttcaaccgatgatcagtc 399
            ||||||||||| |  ||||| | ||  | |   || |||||||||||||| ||||| |||
Sbjct: 1208 tcgatatctcccatgaggaaaccagtgagttcaaagttcatcttcaaccggtgatctgtc 1149

                                                                        
Query: 400  actctgttgtccttataattgtacgtccgtatcttctccgagcgagcaccagtaccgacc 459
            |||||||||||||||||||||||||||| ||||||||| || ||||||||||| || |||
Sbjct: 1148 actctgttgtccttataattgtacgtccttatcttctcagaacgagcaccagttccaacc 1089

                                                                        
Query: 460  tgcagtaacctctgggttcttatggactcttgttgctcccttaactttatctcatatagt 519
            ||||||  ||||||| ||||||| || || || ||||||| ||| |||||||| || || 
Sbjct: 1088 tgcagtttcctctggtttcttatagattcctgctgctcccgtaattttatctcgtaaagc 1029

                                                                        
Query: 520  tttgctctcaataactggaatgcacgttctttgttttgaagttgcgacctttcttctgtg 579
            ||||||||||| || |||||||| |||||| | ||||| ||||| |||||||||||||| 
Sbjct: 1028 tttgctctcaacaattggaatgcgcgttctctattttggagttgtgacctttcttctgta 969

                                                                        
Query: 580  cagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgtta 639
            |||||||| |  ||||||||||| |||||||||||||||| ||| || ||||||||||||
Sbjct: 968  cagaatatccgaattcccgtaggtttgtgaataagatcaacagcagtttccaccttgtta 909

                         
Query: 640  acattctgccctc 652
            |||||||||||||
Sbjct: 908  acattctgccctc 896
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>dbj|AK061105.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B09, full
            insert sequence
          Length = 1647

 Score =  295 bits (149), Expect = 9e-77
 Identities = 317/373 (84%)
 Strand = Plus / Minus

                                                                        
Query: 280  gtggccatttcctccaagagttccttctgctccaaggcagcgcaggactgaatagctgac 339
            |||||||| ||||||| |||||||||||||||||  | ||  |||||||| | ||| |||
Sbjct: 1263 gtggccatctcctccaggagttccttctgctccattgaagaacaggactgcacagccgac 1204

                                                                        
Query: 340  tcgatatctcctaaaaggaagctagacaatatgaaattcatcttcaaccgatgatcagtc 399
            ||||||||||| |  ||||| | ||  | |   || |||||||||||||| ||||| |||
Sbjct: 1203 tcgatatctcccatgaggaaaccagtgagttcaaagttcatcttcaaccggtgatctgtc 1144

                                                                        
Query: 400  actctgttgtccttataattgtacgtccgtatcttctccgagcgagcaccagtaccgacc 459
            |||||||||||||||||||||||||||| ||||||||| || ||||||||||| || |||
Sbjct: 1143 actctgttgtccttataattgtacgtccttatcttctcagaacgagcaccagttccaacc 1084

                                                                        
Query: 460  tgcagtaacctctgggttcttatggactcttgttgctcccttaactttatctcatatagt 519
            ||||||  ||||||| ||||||| || || || ||||||| ||| |||||||| || || 
Sbjct: 1083 tgcagtttcctctggtttcttatagattcctgctgctcccgtaattttatctcgtaaagc 1024

                                                                        
Query: 520  tttgctctcaataactggaatgcacgttctttgttttgaagttgcgacctttcttctgtg 579
            ||||||||||| || |||||||| |||||| | ||||| ||||| |||||||||||||| 
Sbjct: 1023 tttgctctcaacaattggaatgcgcgttctctattttggagttgtgacctttcttctgta 964

                                                                        
Query: 580  cagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgtta 639
            |||||||| |  ||||||||||| |||||||||||||||| ||| || ||||||||||||
Sbjct: 963  cagaatatccgaattcccgtaggtttgtgaataagatcaacagcagtttccaccttgtta 904

                         
Query: 640  acattctgccctc 652
            |||||||||||||
Sbjct: 903  acattctgccctc 891
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>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0485F09, complete sequence
          Length = 161276

 Score =  143 bits (72), Expect = 8e-31
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                         
Query: 520   tttgctctcaataactggaatgcacgttctttgttttgaagttgcgacctttcttctgtg 579
             ||||||||||| || |||||||| |||||| | ||||| ||||| |||||||||||||| 
Sbjct: 47734 tttgctctcaacaattggaatgcgcgttctctattttggagttgtgacctttcttctgta 47675

                                                                         
Query: 580   cagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgtta 639
             |||||||| |  ||||||||||| |||||||||||||||| ||| || ||||||||||||
Sbjct: 47674 cagaatatccgaattcccgtaggtttgtgaataagatcaacagcagtttccaccttgtta 47615

                         
Query: 640   acattctgccct 651
             ||||||||||||
Sbjct: 47614 acattctgccct 47603



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 410   ccttataattgtacgtccgtatcttctccgagcgagcaccagt 452
             |||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 48350 ccttataattgtacgtccttatcttctcagaacgagcaccagt 48308



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 376   ttcatcttcaaccgatgatcagtcactctgttgtcct 412
             |||||||||||||| ||||| ||||||||||||||||
Sbjct: 48518 ttcatcttcaaccggtgatctgtcactctgttgtcct 48482



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 280   gtggccatttcctccaagagttccttctgctcca 313
             |||||||| ||||||| |||||||||||||||||
Sbjct: 48740 gtggccatctcctccaggagttccttctgctcca 48707
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  143 bits (72), Expect = 8e-31
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                            
Query: 520      tttgctctcaataactggaatgcacgttctttgttttgaagttgcgacctttcttctgtg 579
                ||||||||||| || |||||||| |||||| | ||||| ||||| |||||||||||||| 
Sbjct: 25440843 tttgctctcaacaattggaatgcgcgttctctattttggagttgtgacctttcttctgta 25440784

                                                                            
Query: 580      cagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgtta 639
                |||||||| |  ||||||||||| |||||||||||||||| ||| || ||||||||||||
Sbjct: 25440783 cagaatatccgaattcccgtaggtttgtgaataagatcaacagcagtttccaccttgtta 25440724

                            
Query: 640      acattctgccct 651
                ||||||||||||
Sbjct: 25440723 acattctgccct 25440712



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 410      ccttataattgtacgtccgtatcttctccgagcgagcaccagt 452
                |||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 25441459 ccttataattgtacgtccttatcttctcagaacgagcaccagt 25441417



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 376      ttcatcttcaaccgatgatcagtcactctgttgtcct 412
                |||||||||||||| ||||| ||||||||||||||||
Sbjct: 25441627 ttcatcttcaaccggtgatctgtcactctgttgtcct 25441591



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 280      gtggccatttcctccaagagttccttctgctcca 313
                |||||||| ||||||| |||||||||||||||||
Sbjct: 25441849 gtggccatctcctccaggagttccttctgctcca 25441816
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  143 bits (72), Expect = 8e-31
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                            
Query: 520      tttgctctcaataactggaatgcacgttctttgttttgaagttgcgacctttcttctgtg 579
                ||||||||||| || |||||||| |||||| | ||||| ||||| |||||||||||||| 
Sbjct: 25759513 tttgctctcaacaattggaatgcgcgttctctattttggagttgtgacctttcttctgta 25759454

                                                                            
Query: 580      cagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgtta 639
                |||||||| |  ||||||||||| |||||||||||||||| ||| || ||||||||||||
Sbjct: 25759453 cagaatatccgaattcccgtaggtttgtgaataagatcaacagcagtttccaccttgtta 25759394

                            
Query: 640      acattctgccct 651
                ||||||||||||
Sbjct: 25759393 acattctgccct 25759382



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 410      ccttataattgtacgtccgtatcttctccgagcgagcaccagt 452
                |||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 25760129 ccttataattgtacgtccttatcttctcagaacgagcaccagt 25760087



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 376      ttcatcttcaaccgatgatcagtcactctgttgtcct 412
                |||||||||||||| ||||| ||||||||||||||||
Sbjct: 25760297 ttcatcttcaaccggtgatctgtcactctgttgtcct 25760261



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 280      gtggccatttcctccaagagttccttctgctcca 313
                |||||||| ||||||| |||||||||||||||||
Sbjct: 25760519 gtggccatctcctccaggagttccttctgctcca 25760486
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>gb|DQ366745.1| Uncultured Prochlorococcus marinus clone HOT0M-9F4 genomic sequence
          Length = 43714

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 588  tcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgttaacatt 644
            |||||| || ||||||||||| | |||||||||||||||||| ||||| ||||||||
Sbjct: 3509 tcttatacctgtaggcttgtggagaagatcaatagctgtctctaccttattaacatt 3565
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>ref|NM_116156.3| Arabidopsis thaliana APG3 (ALBINO AND PALE GREEN); translation
            release factor/ translation release factor, codon
            specific AT3G62910 (APG3) mRNA, complete cds
          Length = 1416

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1180 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1121

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1120 tctgaacgagctccagtcccaacctg 1095



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 943 agatctatagccgtctccaccttgttcacatt 912
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>gb|AY125535.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, complete cds
          Length = 1269

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1139 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1080

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1079 tctgaacgagctccagtcccaacctg 1054



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 902 agatctatagccgtctccaccttgttcacatt 871
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>gb|AY090253.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, complete cds
          Length = 1378

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1180 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1121

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1120 tctgaacgagctccagtcccaacctg 1095



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 943 agatctatagccgtctccaccttgttcacatt 912
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>emb|BX822806.1|CNS0A75S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB65ZD03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1324

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1141 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1082

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1081 tctgaacgagctccagtcccaacctg 1056



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 904 agatctatagccgtctccaccttgttcacatt 873
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>emb|BX823596.1|CNS0A6JA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS55ZD02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1334

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1152 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1093

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1092 tctgaacgagctccagtcccaacctg 1067



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 915 agatctatagccgtctccaccttgttcacatt 884
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>dbj|AB109893.1| Arabidopsis thaliana APG3 mRNA for Chloroplast Release Factor 1,
            complete cds
          Length = 1269

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttcatcttcaaccgatgatcagtcactctgttgtccttataattgtacgtccgtatcttc 435
            |||||||| | || |||||||||||||||  |||||||||||||||| || | |||||| 
Sbjct: 1139 ttcatctttagcctatgatcagtcactctactgtccttataattgtatgttcttatcttt 1080

                                      
Query: 436  tccgagcgagcaccagtaccgacctg 461
            || || ||||| ||||| || |||||
Sbjct: 1079 tctgaacgagctccagtcccaacctg 1054



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 613 agatcaatagctgtctccaccttgttaacatt 644
           ||||| ||||| |||||||||||||| |||||
Sbjct: 902 agatctatagccgtctccaccttgttcacatt 871
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 570    ttcttctgtgcagaatattcttattcccgtaggcttgtgaataagatcaatagctgtctc 629
              ||||||||||||||| |||| ||||||||| || ||||| || |  |||| ||| || ||
Sbjct: 891458 ttcttctgtgcagaaaattcgtattcccgtcggtttgtgcattaagtcaacagcagtttc 891399

                       
Query: 630    caccttgtt 638
              |||||||||
Sbjct: 891398 caccttgtt 891390



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     tgtaatatgccattttatct 210
               ||||||||||||||||||||
Sbjct: 1844234 tgtaatatgccattttatct 1844215
to top
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5
          Length = 262202

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                         
Query: 568   ctttcttctgtgcagaatattcttattcccgtaggcttgtgaataagatcaatagctgtc 627
             ||||||| ||| || |||| ||| || || || ||||| ||||| ||||||||||| |||
Sbjct: 75995 ctttcttgtgtacaaaatactctgatacctgttggcttatgaattagatcaatagcagtc 76054

                              
Query: 628   tccaccttgttaacatt 644
             || ||||| ||||||||
Sbjct: 76055 tctaccttattaacatt 76071
to top
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 35754 caatatgaaattcatcttcaac 35733
to top
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 76628 caatatgaaattcatcttcaac 76607
to top
>gb|AE006475.1| Streptococcus pyogenes M1 GAS, section 4 of 167 of the complete
            genome
          Length = 11264

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 366  caatatgaaattcatcttcaac 387
            ||||||||||||||||||||||
Sbjct: 2172 caatatgaaattcatcttcaac 2151
to top
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 35750 caatatgaaattcatcttcaac 35729
to top
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 35785 caatatgaaattcatcttcaac 35764
to top
>gb|AE009955.1| Streptococcus pyogenes strain MGAS8232, section 3 of 173 of the
             complete genome
          Length = 11088

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 10921 caatatgaaattcatcttcaac 10900
to top
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 35815 caatatgaaattcatcttcaac 35794
to top
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 366   caatatgaaattcatcttcaac 387
             ||||||||||||||||||||||
Sbjct: 29814 caatatgaaattcatcttcaac 29793
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 588     tcttattcccgtaggcttgtgaataagatcaatagctgtctccaccttgttaacatt 644
               ||||||||| || ||||| || | |||||||||||| ||||| ||||| || |||||
Sbjct: 1522995 tcttattcctgtgggcttatggagaagatcaatagcagtctcaaccttattcacatt 1523051
to top
>gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complete sequence
          Length = 185953

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    gcaaggaatatgattcatgag 152
              |||||||||||||||||||||
Sbjct: 107827 gcaaggaatatgattcatgag 107847
to top
>gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence
          Length = 187958

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 505   tttatctcatatagttttgct 525
             |||||||||||||||||||||
Sbjct: 78652 tttatctcatatagttttgct 78672
to top
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence
          Length = 212965

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    ctgtaatatgccattttatct 210
              |||||||||||||||||||||
Sbjct: 211408 ctgtaatatgccattttatct 211388
to top
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence
          Length = 250495

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    ctgtaatatgccattttatct 210
              |||||||||||||||||||||
Sbjct: 140629 ctgtaatatgccattttatct 140609
to top
>emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in linkage group 10,
              complete sequence
          Length = 199662

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 505    tttatctcatatagttttgct 525
              |||||||||||||||||||||
Sbjct: 104683 tttatctcatatagttttgct 104663
to top
>emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete
              sequence
          Length = 222061

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    gcaaggaatatgattcatgag 152
              |||||||||||||||||||||
Sbjct: 214580 gcaaggaatatgattcatgag 214560
to top
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH015H17, complete sequence
          Length = 110885

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 619   atagctgtctccaccttgttaacattctgccct 651
             ||||| |||||||||||||| ||||| ||||||
Sbjct: 47065 atagcagtctccaccttgttcacattttgccct 47097
to top
>ref|XM_478639.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 625  gtctccaccttgttaacattctgccctc 652
            |||||||||||||| |||||||| ||||
Sbjct: 1150 gtctccaccttgttcacattctggcctc 1123
to top
>gb|AE006294.1| Lactococcus lactis subsp. lactis IL1403 section 56 of 218 of the
            complete genome
          Length = 10292

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  gattcatgagttttttcatg 162
            ||||||||||||||||||||
Sbjct: 5658 gattcatgagttttttcatg 5677
to top
>ref|XM_845266.1| PREDICTED: Canis familiaris similar to G protein-coupled receptor
           25 (LOC608291), mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 567 cctttcttctgtgcagaatattct 590
           |||||||||||||||||| |||||
Sbjct: 824 cctttcttctgtgcagaagattct 847
to top
>emb|CR450828.5| Zebrafish DNA sequence from clone CH211-199A5 in linkage group 2,
             complete sequence
          Length = 90546

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tgtaaaaaatgtggatttag 27
             ||||||||||||||||||||
Sbjct: 35630 tgtaaaaaatgtggatttag 35611
to top
>gb|DQ366741.1| Uncultured Prochlorococcus marinus clone HOT0M-8C8 genomic sequence
          Length = 20952

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 601   ggcttgtgaataagatcaatagctgtctccaccttgttaacatt 644
             ||||| |||| |||||||||||| || || ||||| ||||||||
Sbjct: 18310 ggcttatgaagaagatcaatagcagtttctaccttattaacatt 18267
to top
>emb|AL391863.21| Human DNA sequence from clone RP11-52J3 on chromosome 6 Contains
           the 5' end of the SNX9 gene for sorting nexin 9 (SH3 and
           PX domain-containing protein (SH3PX1, SDP1), FLJ22984)
           and two novel genes. Contains a CpG island, complete
           sequence
          Length = 122556

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 tgaaattcatcttcaaccga 390
           ||||||||||||||||||||
Sbjct: 165 tgaaattcatcttcaaccga 146
to top
>emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10 on chromosome 6q25.1-26
             Contains part of the SNX9 gene for sorting nexin 9 (SH3
             and PX domain-containing protein (SH3PX1, SDP1),
             FLJ22984), an HSPE1 (heat shock 10kD protein 1 (chaperonin
             10)) pseudogene and a novel gene, complete sequence
          Length = 60215

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   tgaaattcatcttcaaccga 390
             ||||||||||||||||||||
Sbjct: 58380 tgaaattcatcttcaaccga 58361
to top
>gb|AC090579.6| Homo sapiens chromosome 8, clone RP11-649G15, complete sequence
          Length = 186066

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    cttgttgctcccttaacttt 507
              ||||||||||||||||||||
Sbjct: 133011 cttgttgctcccttaacttt 132992
to top
>gb|AC006254.10| Homo sapiens 3p21.1-9 PAC RPCI5-966M1 (Roswell Park Cancer Institute
              Human PAC Library) complete sequence
          Length = 133475

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gactgtaatatgccatttta 207
              ||||||||||||||||||||
Sbjct: 126662 gactgtaatatgccatttta 126681
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     acattagcgtatatgcaaaa 100
              ||||||||||||||||||||
Sbjct: 540191 acattagcgtatatgcaaaa 540172
to top
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence
          Length = 186734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    gactgtaatatgccatttta 207
              ||||||||||||||||||||
Sbjct: 156857 gactgtaatatgccatttta 156838
to top
>gb|AC093790.3| Homo sapiens BAC clone RP11-250F14 from 4, complete sequence
          Length = 152359

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   aaggaatagttgaactgatc 259
             ||||||||||||||||||||
Sbjct: 18017 aaggaatagttgaactgatc 17998
to top
>gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 165085

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  gaagaggtggccatttcctc 293
            ||||||||||||||||||||
Sbjct: 3067 gaagaggtggccatttcctc 3086
to top
>emb|CR391943.6| Zebrafish DNA sequence from clone DKEY-15M21 in linkage group 9,
             complete sequence
          Length = 212667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ttaggatatggccagaagca 238
             ||||||||||||||||||||
Sbjct: 90310 ttaggatatggccagaagca 90291
to top
>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete
            sequence
          Length = 146960

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 132  gcaaggaatatgattcatgagttt 155
            ||||||||||||||| ||||||||
Sbjct: 8910 gcaaggaatatgatttatgagttt 8933
to top
>ref|NM_002638.2| Homo sapiens peptidase inhibitor 3, skin-derived (SKALP) (PI3),
           mRNA
          Length = 623

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 aagagttccttctgctccaa 314
           ||||||||||||||||||||
Sbjct: 578 aagagttccttctgctccaa 597
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 532     aactggaatgcacgttctttgttt 555
               ||||||||||||| ||||||||||
Sbjct: 5483133 aactggaatgcaccttctttgttt 5483110
to top
>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   cttgttgctcccttaacttt 507
             ||||||||||||||||||||
Sbjct: 25903 cttgttgctcccttaacttt 25884
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 625      gtctccaccttgttaacattctgccctc 652
                |||||||||||||| |||||||| ||||
Sbjct: 21615687 gtctccaccttgttcacattctggcctc 21615714
to top
>gb|DQ020202.1| Homo sapiens oxidation resistance 1 (OXR1) gene, complete cds
          Length = 96584

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   cttgttgctcccttaacttt 507
             ||||||||||||||||||||
Sbjct: 28657 cttgttgctcccttaacttt 28638
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    tgtaatatgccattttatct 210
              ||||||||||||||||||||
Sbjct: 132066 tgtaatatgccattttatct 132047
to top
>dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, map 22, complete
              sequences
          Length = 214118

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    gaatatgattcatgagttttttca 160
              |||||||||||||||||| |||||
Sbjct: 196130 gaatatgattcatgagttctttca 196153
to top
>dbj|AK065606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034A05, full
            insert sequence
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 625  gtctccaccttgttaacattctgccctc 652
            |||||||||||||| |||||||| ||||
Sbjct: 1150 gtctccaccttgttcacattctggcctc 1123
to top
>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1612_A04
          Length = 124833

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 625   gtctccaccttgttaacattctgccctc 652
             |||||||||||||| |||||||| ||||
Sbjct: 46143 gtctccaccttgttcacattctggcctc 46170
to top
>emb|CR383669.17| Zebrafish DNA sequence from clone DKEY-25O1 in linkage group 24,
            complete sequence
          Length = 185252

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  tttcttctgtgcagaatatt 588
            ||||||||||||||||||||
Sbjct: 9208 tttcttctgtgcagaatatt 9189
to top
>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   gaatatgattcatgagttttttca 160
             |||||||||||||||||| |||||
Sbjct: 20764 gaatatgattcatgagttctttca 20787
to top
>emb|CR925755.8| Zebrafish DNA sequence from clone CH211-138M24 in linkage group 17,
              complete sequence
          Length = 107536

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    cagtcactctgttgtcctta 414
              ||||||||||||||||||||
Sbjct: 101453 cagtcactctgttgtcctta 101472
to top
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 625   gtctccaccttgttaacattctgccctc 652
             |||||||||||||| |||||||| ||||
Sbjct: 88529 gtctccaccttgtttacattctgacctc 88556
to top
>dbj|AP000856.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1539E1
          Length = 152130

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   cttgttgctcccttaacttt 507
             ||||||||||||||||||||
Sbjct: 54370 cttgttgctcccttaacttt 54351
to top
>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
          Length = 83122

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 613  agatcaatagctgtctccaccttgttaacatt 644
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1271 agatctatagccgtctccaccttgttcacatt 1302
to top
>emb|CT033758.4| Mouse DNA sequence from clone RP23-430N23 on chromosome 17, complete
              sequence
          Length = 175359

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    gcaaggaatatgattcatgagttt 155
              ||||||||||||||| ||||||||
Sbjct: 112590 gcaaggaatatgatttatgagttt 112613
to top
>emb|AL121677.3|HS6C10 Homo sapiens chromosome 21 Cosmid ICRFc103C106, complete sequence
          Length = 41943

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   gaatatgattcatgagttttttca 160
             |||||||||||||||||| |||||
Sbjct: 12274 gaatatgattcatgagttctttca 12251
to top
>dbj|AB061670.1| Prunus persica PpNR1 mRNA for nitrate reductase, complete cds
          Length = 3151

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  cactctgttgtccttataat 418
            ||||||||||||||||||||
Sbjct: 1082 cactctgttgtccttataat 1063
to top
>dbj|AP000431.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B28M9,
             LL56-APP region, complete sequence
          Length = 152487

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   gaatatgattcatgagttttttca 160
             |||||||||||||||||| |||||
Sbjct: 60131 gaatatgattcatgagttctttca 60154
to top
>dbj|AP004285.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1356H11
          Length = 145327

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    cttgttgctcccttaacttt 507
              ||||||||||||||||||||
Sbjct: 113171 cttgttgctcccttaacttt 113152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,625,363
Number of Sequences: 3902068
Number of extensions: 6625363
Number of successful extensions: 122795
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122331
Number of HSP's gapped (non-prelim): 462
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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