ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37e20 |
|---|---|
| Clone Library Name | barley_pub |
>AMPP_HAEIN (P44881) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 430 Score = 55.5 bits (132), Expect = 7e-08 Identities = 23/41 (56%), Positives = 35/41 (85%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTLMN 340 P++++GIG+RIED +L+TE G+++LTA+VPKEI + LMN Sbjct: 389 PEQYKGIGVRIEDNLLMTEYGNKILTAAVPKEIADIENLMN 429
>AMPP_ECOLI (P15034) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 440 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/42 (54%), Positives = 34/42 (80%) Frame = -2 Query: 468 KAPDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTLM 343 + P+++RGIGIRIED+++ITE+G+E LTASV K+ + LM Sbjct: 393 EVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALM 434
>AMPP2_STRLI (P0A3Z4) Xaa-Pro aminopeptidase 2 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase II) (X-Pro aminopeptidase II) (Aminopeptidase P II) (APP) (PEPP II) (Aminoacylproline aminopeptidase II) Length = 470 Score = 45.8 bits (107), Expect = 6e-05 Identities = 18/40 (45%), Positives = 29/40 (72%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTLM 343 P+ +RGIG+RIED++++TE GHE L+A +P+ + M Sbjct: 426 PEEWRGIGVRIEDDLVVTEDGHENLSAGLPRSADEVEAWM 465
>AMPP2_STRCO (P0A3Z3) Xaa-Pro aminopeptidase 2 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase II) (X-Pro aminopeptidase II) (Aminopeptidase P II) (APP) (PEPP II) (Aminoacylproline aminopeptidase II) Length = 470 Score = 45.8 bits (107), Expect = 6e-05 Identities = 18/40 (45%), Positives = 29/40 (72%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTLM 343 P+ +RGIG+RIED++++TE GHE L+A +P+ + M Sbjct: 426 PEEWRGIGVRIEDDLVVTEDGHENLSAGLPRSADEVEAWM 465
>AMPP1_STRLI (P0A3Z2) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 41.2 bits (95), Expect = 0.001 Identities = 15/31 (48%), Positives = 25/31 (80%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPK 370 P+ +RGIG+RIED++L+T G+ L+A +P+ Sbjct: 446 PEEYRGIGVRIEDDILVTADGNRNLSAGLPR 476
>AMPP1_STRCO (P0A3Z1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 41.2 bits (95), Expect = 0.001 Identities = 15/31 (48%), Positives = 25/31 (80%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPK 370 P+ +RGIG+RIED++L+T G+ L+A +P+ Sbjct: 446 PEEYRGIGVRIEDDILVTADGNRNLSAGLPR 476
>PEPD_HUMAN (P12955) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 492 Score = 39.7 bits (91), Expect = 0.004 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%) Frame = -2 Query: 477 LNEKAPDRFRGIG-IRIEDEVLITESGHEVLTASVPKEIPHLTTLMNMGGC 328 LN + RFRG G +RIE++V++T+SG E+LT VP+ + + M GC Sbjct: 434 LNREVLQRFRGFGGVRIEEDVVVTDSGIELLTC-VPRTVEEIEAC--MAGC 481
>YEQ8_YEAST (P40051) Hypothetical 58.0 kDa peptidase in PTP3-ILV1 intergenic| region (EC 3.4.-.-) Length = 511 Score = 39.7 bits (91), Expect = 0.004 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -2 Query: 471 EKAPDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTLMNMG 334 E P FR +GIRIED++ I E + LT KEI L +M G Sbjct: 453 ESFPSYFRNVGIRIEDDIAIGEDTYTNLTVEAVKEIDDLENVMQNG 498
>PEPD_MOUSE (Q11136) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) (Peptidase 4) Length = 492 Score = 37.0 bits (84), Expect = 0.027 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = -2 Query: 474 NEKAPDRFRGIG-IRIEDEVLITESGHEVLTASVPKEIPHLTTLMNMGGC 328 N++ RFR G +RIE++V++T+SG E+LT VP+ + + M GC Sbjct: 435 NQEVLQRFRNFGGVRIEEDVVVTDSGMELLTC-VPRTVEEIEAC--MAGC 481
>YDE5_SCHPO (Q10439) Probable peptidase C12B10.05 (EC 3.4.-.-)| Length = 486 Score = 35.0 bits (79), Expect = 0.10 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = -2 Query: 462 PDRFRGIGIRIEDEVLITESGHEVLTASVPKEIPHLTTL 346 P +GI IRIED V++ + VLT++ PKEI + L Sbjct: 446 PQWAQGIAIRIEDSVIVGDDKPFVLTSAAPKEIEEIEAL 484
>YQHT_BACSU (P54518) Putative peptidase yqhT (EC 3.4.-.-)| Length = 353 Score = 32.7 bits (73), Expect = 0.51 Identities = 14/26 (53%), Positives = 22/26 (84%) Frame = -2 Query: 441 GIRIEDEVLITESGHEVLTASVPKEI 364 G+RIED+++ITE+G+ +T S PKE+ Sbjct: 326 GVRIEDDIVITENGNRTITHS-PKEL 350
>ALR1_SCHPO (O59828) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 375 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = -1 Query: 211 IHFLSPFLSKM*ESESPENLNGKTRLLLRSVICSLDKV 98 ++ +SPFLSK +S++PE++N K + L S I S+ V Sbjct: 224 LYGISPFLSKNKDSKTPESVNIKPAMKLVSTIISVKHV 261
>YFH6_YEAST (P43590) Hypothetical 61.8 kDa peptidase in MPR1-GCN20 intergenic| region (EC 3.4.-.-) Length = 535 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%) Frame = -2 Query: 441 GIRIEDEVLITESGHEVLT--ASVPKEI 364 G+RIED++L+T+ G+E LT S P EI Sbjct: 489 GVRIEDDILVTKDGYENLTGITSDPDEI 516
>GP171_HUMAN (O14626) Probable G-protein coupled receptor 171 (G-protein coupled| receptor H963) Length = 319 Score = 30.4 bits (67), Expect = 2.5 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +1 Query: 13 LSENGLFSYSYYTNK*RYNSPNNKNEDQKLCLMNILQTVTAGVFCHLGFQAIPIPTSLTG 192 L N L Y NK N PN K L+NIL T + C + + + IP +L+ Sbjct: 196 LISNCLVIRQLYRNKDNENYPNVKK-----ALINILLVTTGYIICFVPYHIVRIPYTLSQ 250 Query: 193 T 195 T Sbjct: 251 T 251
>TRPE_RHIME (P15395) Anthranilate synthase (EC 4.1.3.27) [Includes: Glutamine| amidotransferase] Length = 729 Score = 30.0 bits (66), Expect = 3.3 Identities = 22/75 (29%), Positives = 36/75 (48%) Frame = -2 Query: 438 IRIEDEVLITESGHEVLTASVPKEIPHLTTLMNMGGCGSMAEAHEARAACS*DDLADSGD 259 IRI+D + +G +L S P+E T L ++ +A A +A S D+A G Sbjct: 468 IRIKDGIAEVRAGATLLYDSNPEEEEAETELKASAMIAAIRDAKSANSAKSARDVAAVGA 527 Query: 258 MMILSTGDHAESTLH 214 + + DH +S +H Sbjct: 528 GVSILLVDHEDSFVH 542
>SYFB_CHLCV (Q824J8) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 793 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 444 IGIRIEDEVLITESGHEVLTASVPKEIPH 358 IGI E E L+T S ++TA V K +PH Sbjct: 28 IGIETEVETLLTCSFSSIITAKVLKTVPH 56
>YPDF_ECOLI (P76524) Aminopeptidase ypdF (EC 3.4.11.-)| Length = 361 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 441 GIRIEDEVLITESGHEVLTASVPKEI 364 G+RIED VL+T G EVL A +PK + Sbjct: 331 GVRIEDVVLVTPQGAEVLYA-MPKTV 355
>PEPQ_PYRFU (P81535) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 348 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -2 Query: 441 GIRIEDEVLITESGHEVLT 385 G+RIED VLITE+G + LT Sbjct: 323 GVRIEDTVLITENGAKRLT 341 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,456,000 Number of Sequences: 219361 Number of extensions: 1223319 Number of successful extensions: 3537 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3469 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3536 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
