ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 192 9e-46
2dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 192 9e-46
3dbj|AK120215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 9e-46
4dbj|AK058292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 9e-46
5gb|AY108764.1| Zea mays PCO147772 mRNA sequence 147 5e-32
6gb|AY389756.1| Hyacinthus orientalis fiber protein mRNA, partial... 96 2e-16
7dbj|AP004517.1| Lotus japonicus genomic DNA, chromosome 6, clone... 72 2e-09
8ref|NM_119147.2| Arabidopsis thaliana unknown protein AT4G30010 ... 44 0.49
9emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, ... 44 0.49
10emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, B... 44 0.49
11emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC... 44 0.49
12gb|AY054143.1| Arabidopsis thaliana AT4g30010/F6G3_40 mRNA, comp... 44 0.49
13gb|AF380650.1|AF380650 Arabidopsis thaliana AT4g30010/F6G3_40 mR... 44 0.49
14gb|AY086876.1| Arabidopsis thaliana clone 2891 mRNA, complete se... 44 0.49
15dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.49
16ref|XM_860322.1| PREDICTED: Canis familiaris similar to RNA bind... 42 2.0
17ref|XM_847190.1| PREDICTED: Canis familiaris similar to RNA bind... 42 2.0
18gb|BC000488.2| Homo sapiens RNA binding motif protein 14, mRNA (... 42 2.0
19ref|NM_006328.2| Homo sapiens RNA binding motif protein 14 (RBM1... 42 2.0
20emb|CR858440.1| Pongo pygmaeus mRNA; cDNA DKFZp469C2227 (from cl... 42 2.0
21emb|CR749306.1| Homo sapiens mRNA; cDNA DKFZp779J0927 (from clon... 42 2.0
22dbj|AK021768.1| Homo sapiens cDNA FLJ11706 fis, clone HEMBA10051... 42 2.0
23gb|BC113267.1| Bos taurus cDNA clone MGC:137891 IMAGE:8088333, c... 42 2.0
24gb|AF315633.1|AF315633 Homo sapiens coactivator modulator mRNA, ... 42 2.0
25gb|AF315632.1|AF315632 Homo sapiens coactivator activator mRNA, ... 42 2.0
26ref|NM_001014901.1| Bos taurus RNA binding motif protein 14 (RBM... 42 2.0
27dbj|AK222830.1| Homo sapiens mRNA for RNA binding motif protein ... 42 2.0
28gb|BT020733.1| Bos taurus RNA binding motif protein 14 (RBM14), ... 42 2.0
29gb|AF080561.1| Homo sapiens SYT interacting protein SIP mRNA, co... 42 2.0
30gb|BC023619.2| Homo sapiens RNA binding motif protein 14, mRNA (... 42 2.0
31dbj|AB209007.1| Homo sapiens mRNA for RNA binding motif protein ... 42 2.0
32emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 42 2.0
33dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.0
34gb|DQ231579.1| Sus scrofa system B0 neutral amino acid transport... 40 7.7
35gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete seq... 40 7.7
36gb|AY658774.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.7
37ref|XM_743947.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.7
38ref|XM_802276.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
39ref|XM_803126.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
40ref|XM_803395.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
41ref|XM_803419.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
42ref|XM_804961.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
43ref|XM_805671.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
44ref|XM_805743.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
45ref|XM_807516.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
46ref|XM_809365.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
47ref|XM_809491.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
48ref|XM_809717.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
49ref|XM_810025.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
50ref|XM_811956.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
51ref|XM_812055.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
52ref|XM_816339.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
53ref|XM_812629.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
54ref|XM_812951.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
55ref|XM_813262.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
56ref|XM_804547.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
57ref|XM_813967.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
58ref|XM_813968.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
59ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
60ref|XM_815580.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
61ref|XM_815582.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
62ref|XM_797788.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
63ref|XM_797876.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
64ref|XM_799539.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
65ref|XM_799597.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
66ref|XM_800281.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
67ref|XM_800557.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
68ref|XM_801508.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
69ref|XM_801735.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
70ref|XM_805433.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
71ref|XM_806081.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
72ref|XM_808377.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 7.7
73emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 7.7
74gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 7.7
75gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.7
76gb|AE004549.1| Pseudomonas aeruginosa PAO1, section 110 of 529 o... 40 7.7
77ref|XM_214682.3| PREDICTED: Rattus norvegicus similar to Formin ... 40 7.7
78gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.7
79emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chr... 40 7.7 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  192 bits (97), Expect = 9e-46
 Identities = 210/248 (84%)
 Strand = Plus / Minus

                                                                           
Query: 261     ctcgaggtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccat 320
               |||||||||  |||||||||||||||||| ||| |||   |  |||||||||||||||||
Sbjct: 4141837 ctcgaggtgggcgaggtggcggcgctccttggggaggttgatgaggtaggagaaggccat 4141778

                                                                           
Query: 321     gccgccgaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcgat 380
               |  |||| ||  ||  ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 4141777 gaggccgtagatgacgtggaagagcggctccggcgagctggtctcgatgtacttgtcgat 4141718

                                                                           
Query: 381     gtagcggtccaccgcctggtcggtgctcttcttcacgttcgcccaggtgaggcggggctt 440
               ||||||||| || ||||||||| ||||||||||||||||| ||||| | || || |||||
Sbjct: 4141717 gtagcggtcgacggcctggtcgctgctcttcttcacgttctcccagctcagccgcggctt 4141658

                                                                           
Query: 441     gaggtacgccggcacctcgcgcaccttnatcgcgcggatctcgttgtacagcgcacgcat 500
                |||||| |||||||||| |||||||| ||| | ||||||||| ||  ||| || |||| 
Sbjct: 4141657 caggtaccccggcacctcccgcaccttcatcccccggatctcgctgatcagggctcgcag 4141598

                       
Query: 501     cgccatgg 508
               ||||||||
Sbjct: 4141597 cgccatgg 4141590



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                    
Query: 34      caatgcatgcacttccagtttgaagttgcttatgata 70
               |||||||||||||||||||||||||||||||||||||
Sbjct: 4143472 caatgcatgcacttccagtttgaagttgcttatgata 4143436
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score =  192 bits (97), Expect = 9e-46
 Identities = 210/248 (84%)
 Strand = Plus / Minus

                                                                         
Query: 261   ctcgaggtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccat 320
             |||||||||  |||||||||||||||||| ||| |||   |  |||||||||||||||||
Sbjct: 51851 ctcgaggtgggcgaggtggcggcgctccttggggaggttgatgaggtaggagaaggccat 51792

                                                                         
Query: 321   gccgccgaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcgat 380
             |  |||| ||  ||  ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 51791 gaggccgtagatgacgtggaagagcggctccggcgagctggtctcgatgtacttgtcgat 51732

                                                                         
Query: 381   gtagcggtccaccgcctggtcggtgctcttcttcacgttcgcccaggtgaggcggggctt 440
             ||||||||| || ||||||||| ||||||||||||||||| ||||| | || || |||||
Sbjct: 51731 gtagcggtcgacggcctggtcgctgctcttcttcacgttctcccagctcagccgcggctt 51672

                                                                         
Query: 441   gaggtacgccggcacctcgcgcaccttnatcgcgcggatctcgttgtacagcgcacgcat 500
              |||||| |||||||||| |||||||| ||| | ||||||||| ||  ||| || |||| 
Sbjct: 51671 caggtaccccggcacctcccgcaccttcatcccccggatctcgctgatcagggctcgcag 51612

                     
Query: 501   cgccatgg 508
             ||||||||
Sbjct: 51611 cgccatgg 51604



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                  
Query: 34    caatgcatgcacttccagtttgaagttgcttatgata 70
             |||||||||||||||||||||||||||||||||||||
Sbjct: 53486 caatgcatgcacttccagtttgaagttgcttatgata 53450
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>dbj|AK120215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040G12, full
           insert sequence
          Length = 752

 Score =  192 bits (97), Expect = 9e-46
 Identities = 210/248 (84%)
 Strand = Plus / Minus

                                                                       
Query: 261 ctcgaggtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccat 320
           |||||||||  |||||||||||||||||| ||| |||   |  |||||||||||||||||
Sbjct: 333 ctcgaggtgggcgaggtggcggcgctccttggggaggttgatgaggtaggagaaggccat 274

                                                                       
Query: 321 gccgccgaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcgat 380
           |  |||| ||  ||  ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 273 gaggccgtagatgacgtggaagagcggctccggcgagctggtctcgatgtacttgtcgat 214

                                                                       
Query: 381 gtagcggtccaccgcctggtcggtgctcttcttcacgttcgcccaggtgaggcggggctt 440
           ||||||||| || ||||||||| ||||||||||||||||| ||||| | || || |||||
Sbjct: 213 gtagcggtcgacggcctggtcgctgctcttcttcacgttctcccagctcagccgcggctt 154

                                                                       
Query: 441 gaggtacgccggcacctcgcgcaccttnatcgcgcggatctcgttgtacagcgcacgcat 500
            |||||| |||||||||| |||||||| ||| | ||||||||| ||  ||| || |||| 
Sbjct: 153 caggtaccccggcacctcccgcaccttcatcccccggatctcgctgatcagggctcgcag 94

                   
Query: 501 cgccatgg 508
           ||||||||
Sbjct: 93  cgccatgg 86



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                
Query: 34  caatgcatgcacttccagtttgaagttgcttatgata 70
           |||||||||||||||||||||||||||||||||||||
Sbjct: 575 caatgcatgcacttccagtttgaagttgcttatgata 539
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>dbj|AK058292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E12, full
           insert sequence
          Length = 591

 Score =  192 bits (97), Expect = 9e-46
 Identities = 210/248 (84%)
 Strand = Plus / Minus

                                                                       
Query: 261 ctcgaggtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccat 320
           |||||||||  |||||||||||||||||| ||| |||   |  |||||||||||||||||
Sbjct: 291 ctcgaggtgggcgaggtggcggcgctccttggggaggttgatgaggtaggagaaggccat 232

                                                                       
Query: 321 gccgccgaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcgat 380
           |  |||| ||  ||  ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 231 gaggccgtagatgacgtggaagagcggctccggcgagctggtctcgatgtacttgtcgat 172

                                                                       
Query: 381 gtagcggtccaccgcctggtcggtgctcttcttcacgttcgcccaggtgaggcggggctt 440
           ||||||||| || ||||||||| ||||||||||||||||| ||||| | || || |||||
Sbjct: 171 gtagcggtcgacggcctggtcgctgctcttcttcacgttctcccagctcagccgcggctt 112

                                                                       
Query: 441 gaggtacgccggcacctcgcgcaccttnatcgcgcggatctcgttgtacagcgcacgcat 500
            |||||| |||||||||| |||||||| ||| | ||||||||| ||  ||| || |||| 
Sbjct: 111 caggtaccccggcacctcccgcaccttcatcccccggatctcgctgatcagggctcgcag 52

                   
Query: 501 cgccatgg 508
           ||||||||
Sbjct: 51  cgccatgg 44



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 34  caatgcatgcacttccagtttgaagttgcttatgata 70
           |||||||||||||||||| ||||||||||||||||||
Sbjct: 538 caatgcatgcacttccagcttgaagttgcttatgata 502
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>gb|AY108764.1| Zea mays PCO147772 mRNA sequence
          Length = 910

 Score =  147 bits (74), Expect = 5e-32
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tccggcgagctggtctcgatgtacttctcgatgtagcggtccaccgcctggtcggtgctc 408
           ||||||||||| || |||||||||||||||||||||||||| || |||||||||| ||||
Sbjct: 408 tccggcgagctcgtgtcgatgtacttctcgatgtagcggtcgacggcctggtcggcgctc 349

                                                                       
Query: 409 ttcttcacgttcgcccaggtgaggcggggcttgaggtacgccggcacctcgcgcaccttn 468
           ||||| |||||  ||||||| | ||| ||||| ||||| |||||||| ||||| ||||| 
Sbjct: 348 ttcttgacgttgtcccaggtcaagcgcggcttcaggtaagccggcacgtcgcggaccttc 289

                                                    
Query: 469 atcgcgcggatctcgttgtacagcgcacgcatcgccatggc 509
           ||    ||||||||||||||||| ||||||| |||||||||
Sbjct: 288 atgctccggatctcgttgtacagggcacgcagcgccatggc 248
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>gb|AY389756.1| Hyacinthus orientalis fiber protein mRNA, partial cds
          Length = 608

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 123/148 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 ggtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccatgccgc 325
           |||||||||||||||||||||| ||||| ||| | || ||||||||||||  ||| ||||
Sbjct: 239 ggtgctcgaggtggcggcgctcatgggggagggcgacgaggtaggagaagatcatcccgc 180

                                                                       
Query: 326 cgaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcgatgtagc 385
           ||| ||| |  |||||||  |||||    ||||| || ||||||||||||||||||||||
Sbjct: 179 cgatgcatacgtggaagaggggctcgacggagctcgtatcgatgtacttctcgatgtagc 120

                                       
Query: 386 ggtccaccgcctggtcggtgctcttctt 413
           |||| || ||||| |||||  |||||||
Sbjct: 119 ggtcaacggcctgatcggtcgtcttctt 92
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>dbj|AP004517.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT14B06, TM0045,
             complete sequence
          Length = 113139

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                         
Query: 267   gtgctcgaggtggcggcgctcctggggaaggcccacaaggtaggagaaggccatgccgcc 326
             ||||||||| |||||||||||||  || ||    |||||||||||||||  |||||||||
Sbjct: 13461 gtgctcgagatggcggcgctccttagggagattaacaaggtaggagaagatcatgccgcc 13520

                                                                 
Query: 327   gaagcagatatggaagatcggctccggcgagctggtctcgatgtacttctcg 378
               |||||| ||||||||  ||||| || || ||||| |||||||||||||||
Sbjct: 13521 atagcagacatggaagagaggctcaggggaactggtttcgatgtacttctcg 13572
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>ref|NM_119147.2| Arabidopsis thaliana unknown protein AT4G30010 mRNA, complete cds
          Length = 349

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 301 acaaggtaggagaaggccatgccgccgaagcagatatg 338
           |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 282 acaaggtaagagaaagccatgccgtagaagcagatatg 245
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>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72
          Length = 198924

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 301   acaaggtaggagaaggccatgccgccgaagcagatatg 338
             |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 12803 acaaggtaagagaaagccatgccgtagaagcagatatg 12766
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>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project)
          Length = 98401

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 301   acaaggtaggagaaggccatgccgccgaagcagatatg 338
             |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 97730 acaaggtaagagaaagccatgccgtagaagcagatatg 97693
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>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project)
          Length = 93953

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 301  acaaggtaggagaaggccatgccgccgaagcagatatg 338
            |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 9974 acaaggtaagagaaagccatgccgtagaagcagatatg 9937
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>gb|AY054143.1| Arabidopsis thaliana AT4g30010/F6G3_40 mRNA, complete cds
          Length = 273

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 301 acaaggtaggagaaggccatgccgccgaagcagatatg 338
           |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 206 acaaggtaagagaaagccatgccgtagaagcagatatg 169
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>gb|AF380650.1|AF380650 Arabidopsis thaliana AT4g30010/F6G3_40 mRNA, complete cds
          Length = 594

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 301 acaaggtaggagaaggccatgccgccgaagcagatatg 338
           |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 291 acaaggtaagagaaagccatgccgtagaagcagatatg 254
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>gb|AY086876.1| Arabidopsis thaliana clone 2891 mRNA, complete sequence
          Length = 588

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 301 acaaggtaggagaaggccatgccgccgaagcagatatg 338
           |||||||| ||||| |||||||||  ||||||||||||
Sbjct: 321 acaaggtaagagaaagccatgccgtagaagcagatatg 284
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 273   gaggtggcggcgctcctgggga 294
             ||||||||||||||||||||||
Sbjct: 93329 gaggtggcggcgctcctgggga 93308
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>ref|XM_860322.1| PREDICTED: Canis familiaris similar to RNA binding motif protein 14,
            transcript variant 2 (LOC610639), mRNA
          Length = 2563

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2030 ctcctggggaaggcccacagggtag 2006
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>ref|XM_847190.1| PREDICTED: Canis familiaris similar to RNA binding motif protein 14,
            transcript variant 1 (LOC610639), mRNA
          Length = 2747

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2214 ctcctggggaaggcccacagggtag 2190
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>gb|BC000488.2| Homo sapiens RNA binding motif protein 14, mRNA (cDNA clone MGC:8361
            IMAGE:2819856), complete cds
          Length = 2844

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2228 ctcctggggaaggcccacatggtag 2204
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>ref|NM_006328.2| Homo sapiens RNA binding motif protein 14 (RBM14), mRNA
          Length = 2811

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2248 ctcctggggaaggcccacatggtag 2224
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>emb|CR858440.1| Pongo pygmaeus mRNA; cDNA DKFZp469C2227 (from clone DKFZp469C2227)
          Length = 2788

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2245 ctcctggggaaggcccacatggtag 2221
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>emb|CR749306.1| Homo sapiens mRNA; cDNA DKFZp779J0927 (from clone DKFZp779J0927)
          Length = 3627

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 285 ctcctggggaaggcccacaaggtag 309
           ||||||||||||||||||| |||||
Sbjct: 497 ctcctggggaaggcccacatggtag 473
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>dbj|AK021768.1| Homo sapiens cDNA FLJ11706 fis, clone HEMBA1005101, highly similar to
            Homo sapiens SYT interacting protein SIP mRNA
          Length = 2773

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2244 ctcctggggaaggcccacatggtag 2220
to top
>gb|BC113267.1| Bos taurus cDNA clone MGC:137891 IMAGE:8088333, complete cds
          Length = 1475

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 285 ctcctggggaaggcccacaaggtag 309
           ||||||||||||||||||| |||||
Sbjct: 871 ctcctggggaaggcccacatggtag 847
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>gb|AF315633.1|AF315633 Homo sapiens coactivator modulator mRNA, complete cds,
           alternatively spliced
          Length = 976

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 285 ctcctggggaaggcccacaaggtag 309
           ||||||||||||||||||| |||||
Sbjct: 894 ctcctggggaaggcccacatggtag 870
to top
>gb|AF315632.1|AF315632 Homo sapiens coactivator activator mRNA, complete cds, alternatively
            spliced
          Length = 2781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2248 ctcctggggaaggcccacatggtag 2224
to top
>ref|NM_001014901.1| Bos taurus RNA binding motif protein 14 (RBM14), mRNA
          Length = 2760

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2231 ctcctggggaaggcccacatggtag 2207
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>dbj|AK222830.1| Homo sapiens mRNA for RNA binding motif protein 14 variant, clone:
            HEP05339
          Length = 2427

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2245 ctcctggggaaggcccacatggtag 2221
to top
>gb|BT020733.1| Bos taurus RNA binding motif protein 14 (RBM14), mRNA, complete cds
          Length = 2760

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2231 ctcctggggaaggcccacatggtag 2207
to top
>gb|AF080561.1| Homo sapiens SYT interacting protein SIP mRNA, complete cds
          Length = 2766

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2233 ctcctggggaaggcccacatggtag 2209
to top
>gb|BC023619.2| Homo sapiens RNA binding motif protein 14, mRNA (cDNA clone
            IMAGE:4651407)
          Length = 2793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 2228 ctcctggggaaggcccacatggtag 2204
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>dbj|AB209007.1| Homo sapiens mRNA for RNA binding motif protein 14 variant protein
          Length = 6303

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ctcctggggaaggcccacaaggtag 309
            ||||||||||||||||||| |||||
Sbjct: 5774 ctcctggggaaggcccacatggtag 5750
to top
>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
              sequence
          Length = 192322

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 139    atcaaataaaatcaactccaggtagccca 167
              ||||||||||||||| |||||| ||||||
Sbjct: 157536 atcaaataaaatcaaatccaggcagccca 157564
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>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete
             sequence
          Length = 200458

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 285   ctcctggggaaggcccacaaggtag 309
             ||||||||||||||||||| |||||
Sbjct: 45915 ctcctggggaaggcccacatggtag 45891
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>gb|DQ231579.1| Sus scrofa system B0 neutral amino acid transporter SLC6A19 mRNA,
           partial cds
          Length = 443

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 ctggtcggtgctcttcttca 415
           ||||||||||||||||||||
Sbjct: 373 ctggtcggtgctcttcttca 392
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>gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete sequence
          Length = 58071

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   gcacgcatcgccatggccgc 512
             ||||||||||||||||||||
Sbjct: 28060 gcacgcatcgccatggccgc 28079
to top
>gb|AY658774.1| Synthetic construct Peudomonas aeruginosa clone FLH034408.01F
           PA1192 gene, partial cds
          Length = 825

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gaaggccatgccgccgaagc 331
           ||||||||||||||||||||
Sbjct: 483 gaaggccatgccgccgaagc 502
to top
>ref|XM_743947.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g04700) partial
            mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  ttgttgctgctttccgacac 124
            ||||||||||||||||||||
Sbjct: 1100 ttgttgctgctttccgacac 1081
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>ref|XM_802276.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511769.20) partial mRNA
          Length = 10281

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6084 gcacgcatcgccatggccgc 6065
to top
>ref|XM_803126.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507827.10) partial mRNA
          Length = 10383

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6090 gcacgcatcgccatggccgc 6071
to top
>ref|XM_803395.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511677.10) partial mRNA
          Length = 10377

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6084 gcacgcatcgccatggccgc 6065
to top
>ref|XM_803419.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510235.10) partial mRNA
          Length = 10404

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6102 gcacgcatcgccatggccgc 6083
to top
>ref|XM_804961.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510459.30) partial mRNA
          Length = 10458

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6171 gcacgcatcgccatggccgc 6152
to top
>ref|XM_805671.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510391.10) partial mRNA
          Length = 10446

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6153 gcacgcatcgccatggccgc 6134
to top
>ref|XM_805743.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053503655.20) partial mRNA
          Length = 10395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6102 gcacgcatcgccatggccgc 6083
to top
>ref|XM_807516.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508159.40) partial mRNA
          Length = 10449

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6159 gcacgcatcgccatggccgc 6140
to top
>ref|XM_809365.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506675.70) partial mRNA
          Length = 10344

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6081 gcacgcatcgccatggccgc 6062
to top
>ref|XM_809491.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507643.50) partial mRNA
          Length = 10371

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6108 gcacgcatcgccatggccgc 6089
to top
>ref|XM_809717.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511767.20) partial mRNA
          Length = 10395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6093 gcacgcatcgccatggccgc 6074
to top
>ref|XM_810025.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508523.40) partial mRNA
          Length = 10413

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6147 gcacgcatcgccatggccgc 6128
to top
>ref|XM_811956.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510175.60) partial mRNA
          Length = 10395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6090 gcacgcatcgccatggccgc 6071
to top
>ref|XM_812055.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511487.30) partial mRNA
          Length = 10431

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6138 gcacgcatcgccatggccgc 6119
to top
>ref|XM_816339.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508163.70) partial mRNA
          Length = 10443

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6153 gcacgcatcgccatggccgc 6134
to top
>ref|XM_812629.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053504115.100) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6153 gcacgcatcgccatggccgc 6134
to top
>ref|XM_812951.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511771.210) partial mRNA
          Length = 10365

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6159 gcacgcatcgccatggccgc 6140
to top
>ref|XM_813262.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510465.150) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6153 gcacgcatcgccatggccgc 6134
to top
>ref|XM_804547.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506623.60) partial mRNA
          Length = 5973

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 1665 gcacgcatcgccatggccgc 1646
to top
>ref|XM_813967.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510355.10) partial mRNA
          Length = 10353

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6153 gcacgcatcgccatggccgc 6134
to top
>ref|XM_813968.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510355.90) partial mRNA
          Length = 10293

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6093 gcacgcatcgccatggccgc 6074
to top
>ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509287.240) partial mRNA
          Length = 10392

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6099 gcacgcatcgccatggccgc 6080
to top
>ref|XM_815580.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506173.140) partial mRNA
          Length = 10329

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6117 gcacgcatcgccatggccgc 6098
to top
>ref|XM_815582.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506173.190) partial mRNA
          Length = 10350

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6084 gcacgcatcgccatggccgc 6065
to top
>ref|XM_797788.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507855.9) partial mRNA
          Length = 3034

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 1999 gcacgcatcgccatggccgc 1980
to top
>ref|XM_797876.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510925.9) partial mRNA
          Length = 3342

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 1991 gcacgcatcgccatggccgc 1972
to top
>ref|XM_799539.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508591.10) partial mRNA
          Length = 6066

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 1806 gcacgcatcgccatggccgc 1787
to top
>ref|XM_799597.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053436137.9) partial mRNA
          Length = 6483

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6035 gcacgcatcgccatggccgc 6016
to top
>ref|XM_800281.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511009.9) partial mRNA
          Length = 7954

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 5761 gcacgcatcgccatggccgc 5742
to top
>ref|XM_800557.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508803.19) partial mRNA
          Length = 6617

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6090 gcacgcatcgccatggccgc 6071
to top
>ref|XM_801508.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506111.20) partial mRNA
          Length = 7666

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 3376 gcacgcatcgccatggccgc 3357
to top
>ref|XM_801735.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510867.9) partial mRNA
          Length = 6785

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6144 gcacgcatcgccatggccgc 6125
to top
>ref|XM_805433.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511007.10) partial mRNA
          Length = 9732

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 5448 gcacgcatcgccatggccgc 5429
to top
>ref|XM_806081.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053504241.34) partial mRNA
          Length = 8340

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 6162 gcacgcatcgccatggccgc 6143
to top
>ref|XM_808377.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508001.10) partial mRNA
          Length = 5294

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  gcacgcatcgccatggccgc 512
            ||||||||||||||||||||
Sbjct: 1001 gcacgcatcgccatggccgc 982
to top
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gctccggcgagctggtctcg 366
              ||||||||||||||||||||
Sbjct: 189024 gctccggcgagctggtctcg 189005
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     cccacaaggtaggagaaggc 317
               ||||||||||||||||||||
Sbjct: 3728655 cccacaaggtaggagaaggc 3728636
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     ctcgaggtgctcgaggtggc 280
               ||||||||||||||||||||
Sbjct: 1955715 ctcgaggtgctcgaggtggc 1955734
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>gb|AE004549.1| Pseudomonas aeruginosa PAO1, section 110 of 529 of the complete
            genome
          Length = 10375

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  gaaggccatgccgccgaagc 331
            ||||||||||||||||||||
Sbjct: 6891 gaaggccatgccgccgaagc 6910
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>ref|XM_214682.3| PREDICTED: Rattus norvegicus similar to Formin homology 2 domain
            containing 1 (LOC291964), mRNA
          Length = 3346

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  aggcccacaaggtaggagaaggcc 318
            ||||||||||||||||| ||||||
Sbjct: 1808 aggcccacaaggtaggacaaggcc 1785
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 502     gccatggccgcgacctcgga 521
               ||||||||||||||||||||
Sbjct: 3148423 gccatggccgcgacctcgga 3148442
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>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete
             sequence
          Length = 193108

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   gccatcaaataaaatcaact 155
             ||||||||||||||||||||
Sbjct: 61066 gccatcaaataaaatcaact 61047


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,400,973
Number of Sequences: 3902068
Number of extensions: 4400973
Number of successful extensions: 78330
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77886
Number of HSP's gapped (non-prelim): 434
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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