ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37d21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 Score = 1185 bits (598), Expect = 0.0 Identities = 607/610 (99%) Strand = Plus / Minus Query: 1 gaaattttacgtccctggcactcccaggaagaacggaagtgtcaatggaccgcacggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1740 gaaattttacgtccctggcactcccaggaagaacggaagtgtcaatggaccgcacggagg 1681 Query: 61 ggattacagttattatgtaacagggctcccgcaggacaacaccccagcagaatgcacacg 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1680 ggattacagttattatgtaacggggctcccgcaggacaacaccccagcagaatgcacacg 1621 Query: 121 aaaaattacaggacggttaacccagcaaaggaggaccggaaggtttctggggatgcgaga 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1620 aaaaattacaggacggttaactcagcaaaggaggaccggaaggtttctggggatgcgaga 1561 Query: 181 aggtgggcgggcaggcgggtgaacgtcactcaaatatcctctgggccgttgatgtccttg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1560 aggtgggcgggcaggcgggtgaacgtcactcaaatatcctctgggccgttgatgtccttg 1501 Query: 241 ttctcaagcaccgctccgtctgggatctccaacttgactccagccttggcggcgatggtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 ttctcaagcaccgctccgtctgggatctccaacttgactccagccttggcggcgatggtc 1441 Query: 301 acgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaagctg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1440 acgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaagctg 1381 Query: 361 tcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaacctttttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1380 tcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaacctttttg 1321 Query: 421 aactcaggaccaagctcaattgaagggttcgatggcttcactctggccgggttgcggatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 aactcaggaccaagctcaattgaagggttcgatggcttcactctggccgggttgcggatg 1261 Query: 481 acatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtagcc 540 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 acatagccatcgaccaaggtatagagatcagactgcacaagcaacaaatcagatgtagcc 1201 Query: 541 ttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacctg 1141 Query: 601 atcgctgctc 610 |||||||||| Sbjct: 1140 atcgctgctc 1131
>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA sequence Length = 1814 Score = 678 bits (342), Expect = 0.0 Identities = 387/402 (96%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1527 ctcaaagatcctccgggccgttgatgtccttgttctccagcacagctccgtctgggatct 1468 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| Sbjct: 1467 ccaacttgactccagccttggctgcgatggtcacgttgccctcgagcacgactccagagc 1408 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || Sbjct: 1407 caaacgagacatcaccagagaccttcaagctgtcgagctcaacgatgctggggatcgtct 1348 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 1288 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1287 tcgatggcttcactctggctgggttgcggatgacgtagccatcgaccaaggtatagagat 1228 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1227 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 1168 Query: 569 cattgatgccgattgctttctcaaagaacctgatcgctgctc 610 | |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1167 cgttgatgccgattgccttctcaaagaacctgatcgctgctc 1126 Score = 184 bits (93), Expect = 2e-43 Identities = 157/176 (89%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 1 gaaattttacgtccctggcactcccaggaagaacggaagtgtcaatggaccgcacggagg 60 ||||||||||||||||||||| |||||||||||| |||||| ||| || |||| |||| Sbjct: 1724 gaaattttacgtccctggcacgcccaggaagaac--aagtgtagatgaacagcacagagg 1667 Query: 61 ggattacagttattatgtaacagggctcccgcaggacaacaccccagcagaatgcacacg 120 |||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct: 1666 ggattacaattattatgtaagggggctatcccaggacaacaccccagcagaatgcacacg 1607 Query: 121 aaaaattacaggacggttaacccagcaaaggaggaccggaaggtttctggggatgc 176 |||||||||||||||||||| || | |||||||||||||||||||||||| |||| Sbjct: 1606 -aaaattacaggacggttaactcaacgaaggaggaccggaaggtttctgggaatgc 1552
>gb|AY178448.1| Bambusa oldhamii UDP-glucose pyrophosphorylase (UGP) mRNA, complete cds Length = 1731 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||| || || ||||||||||||||||||||||| | ||| ||||| ||||||| ||| Sbjct: 1518 atcctccggaccattgatgtccttgttctcaagcacagttccatctggaatctccagctt 1459 Query: 276 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 335 ||||||| |||||| | ||||||||| |||||||||||| | |||||||||||| | Sbjct: 1458 cactccagacttggcagagatggtcaccttgcccttgagtgtaatgccagagccaaacca 1399 Query: 336 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacg 395 |||||||||||||||||||| ||||||||||||||| ||||||||||| || || || || Sbjct: 1398 gacatcaccagagaccttcatgctgtcaagctcgacaatgctggggattgatttaaatcg 1339 Query: 396 ggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatgg 455 ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 1338 ggctaggaaattggcaacctttttgaactcaggcccaagctcaattgaagggtttgccgg 1279 Query: 456 cttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 || | || || ||||||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 1278 gtttgccctagctgggttgcggatgacaaagccatcgaccaaggtataaagatcagactg 1219 Query: 516 cacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgat 575 |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 1218 cacaagcaacaaatcagatgtagctttcactggcagaaaccttgagcgtggaacattaat 1159 Query: 576 gccgattgctttctcaaagaacc 598 |||||||||||| |||||||||| Sbjct: 1158 gccgattgctttttcaaagaacc 1136
>dbj|AK119232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E10, full insert sequence Length = 1696 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1498 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1439 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1438 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1382 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1381 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1322 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1321 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1262 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1261 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1202 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1201 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1142 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1141 cattaatgccaattgctttttcaaagaacc 1112
>dbj|AK119197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C12, full insert sequence Length = 1727 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1499 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1440 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1439 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1383 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1382 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1323 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1322 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1263 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1262 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1203 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1202 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1143 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1142 cattaatgccaattgctttttcaaagaacc 1113
>dbj|AK104344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B12, full insert sequence Length = 1695 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1497 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1438 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1437 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1381 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1380 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1321 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1320 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1261 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1260 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1201 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1200 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1141 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1140 cattaatgccaattgctttttcaaagaacc 1111
>dbj|AK103930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E03, full insert sequence Length = 1694 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1491 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1432 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1431 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1375 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1374 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1315 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1314 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1255 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1254 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1195 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1194 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1135 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1134 cattaatgccaattgctttttcaaagaacc 1105
>dbj|AK065780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M01, full insert sequence Length = 1750 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1498 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1439 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1438 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1382 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1381 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1322 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1321 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1262 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1261 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1202 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1201 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1142 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1141 cattaatgccaattgctttttcaaagaacc 1112
>dbj|AB062606.1| Oryza sativa (japonica cultivar-group) UGP mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1700 Score = 389 bits (196), Expect = e-105 Identities = 342/390 (87%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1478 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1419 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1418 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1362 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1361 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1302 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 | || ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1301 taaaccgggccaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggt 1242 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | ||||| || |||||| ||||||||||||||| ||||||| |||||||| || | || Sbjct: 1241 ttgatgggtttgttctggctgggttgcggatgacaaagccatcgaccaaggtgtacaaat 1182 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaa 568 ||||||| |||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 1181 cagactgtacaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaa 1122 Query: 569 cattgatgccgattgctttctcaaagaacc 598 |||| ||||| |||||||| |||||||||| Sbjct: 1121 cattaatgccaattgctttttcaaagaacc 1092
>gb|BT016879.1| Zea mays clone Contig712 mRNA sequence Length = 1052 Score = 371 bits (187), Expect = 2e-99 Identities = 334/383 (87%) Strand = Plus / Plus Query: 216 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||| ||||| |||| |||||||||||||| || |||| ||||| ||||||||||| Sbjct: 246 atcctcagggccattgacatccttgttctcaagtacgtctccatctggaatctccaactt 305 Query: 276 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 335 ||||||| ||||||| || ||||| |||||||||||| | ||| ||||||||| | Sbjct: 306 cactccaggcttggcgataattgtcaccttgcccttgagtgtaattccggagccaaacca 365 Query: 336 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacg 395 |||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| || Sbjct: 366 gacatcaccagaaaccttcaagctgtcaagctcaactatgctggggatggacttgaaccg 425 Query: 396 ggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatgg 455 |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| | ||| Sbjct: 426 agcaaggaaattggcaaccttcttgaactcaggtccaagctcaattgaagggttagctgg 485 Query: 456 cttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 ||| |||||| ||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 486 attcgctctggatgggttgcggatgacaaagccatcaaccaaggtgtaaagatcagactg 545 Query: 516 cacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgat 575 ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 546 cacaagcaacagatcagatgtagccttcactgggagaaaccttgagcggggaacattaat 605 Query: 576 gccgattgctttctcaaagaacc 598 || || ||||| || ||||||| Sbjct: 606 tccaatcgctttgtcgaagaacc 628
>gb|BT016795.1| Zea mays clone Contig628 mRNA sequence Length = 1522 Score = 359 bits (181), Expect = 7e-96 Identities = 331/381 (86%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||| ||||| |||| |||||||| |||| || ||||| ||||| | ||||||||| Sbjct: 973 atcctcagggccattgacatccttgttttcaaatacagctccatctggaacctccaactt 914 Query: 276 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 335 ||||||| |||||||| ||| ||||| ||||||||||| | |||||| |||||| | Sbjct: 913 cactccagacttggcggtgattgtcaccttgcccttgagcgtaattccagaaccaaacca 854 Query: 336 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacg 395 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 853 gacatcaccagaaaccttcaagctgtcaagctcgacgatgctggggatggacttgaaccg 794 Query: 396 ggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatgg 455 |||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| | ||| Sbjct: 793 agcaaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggttagctgg 734 Query: 456 cttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 ||| |||||| || |||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 733 attcgctctggatggattgcggatgacaaagccatcaaccaaggtgtaaagatcagactg 674 Query: 516 cacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgat 575 ||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||| || Sbjct: 673 cacaagcaataaatcagatgtagccttcaccgggagaaatcttgagcggggaacattaat 614 Query: 576 gccgattgctttctcaaagaa 596 || || ||||| |||||||| Sbjct: 613 tccaatcgctttgtcaaagaa 593
>gb|AY103595.1| Zea mays PCO108378 mRNA sequence Length = 1960 Score = 359 bits (181), Expect = 7e-96 Identities = 331/381 (86%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||| ||||| |||| |||||||| |||| || ||||| ||||| | ||||||||| Sbjct: 1559 atcctcagggccattgacatccttgttttcaaatacagctccatctggaacctccaactt 1500 Query: 276 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 335 ||||||| |||||||| ||| ||||| ||||||||||| | |||||| |||||| | Sbjct: 1499 cactccagacttggcggtgattgtcaccttgcccttgagcgtaattccagaaccaaacca 1440 Query: 336 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacg 395 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1439 gacatcaccagaaaccttcaagctgtcaagctcgacgatgctggggatggacttgaaccg 1380 Query: 396 ggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatgg 455 |||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| | ||| Sbjct: 1379 agcaaggaaattggcaaccttcttgaactcaggtccaagctcaatcgaagggttagctgg 1320 Query: 456 cttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 ||| |||||| || |||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 1319 attcgctctggatggattgcggatgacaaagccatcaaccaaggtgtaaagatcagactg 1260 Query: 516 cacaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgat 575 ||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||| || Sbjct: 1259 cacaagcaataaatcagatgtagccttcaccgggagaaatcttgagcggggaacattaat 1200 Query: 576 gccgattgctttctcaaagaa 596 || || ||||| |||||||| Sbjct: 1199 tccaatcgctttgtcaaagaa 1179
>gb|AF457981.1| Zea mays clone cen3n.pk0074.e9, mRNA sequence Length = 509 Score = 230 bits (116), Expect = 4e-57 Identities = 195/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 380 ggatcgacttgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaa 439 |||| |||||||| || |||||||| ||||||||||| ||||||||||| |||||||||| Sbjct: 509 ggatggacttgaaccgagcaaggaaattggcaaccttcttgaactcaggtccaagctcaa 450 Query: 440 ttgaagggttcgatggcttcactctggccgggttgcggatgacatagccatcaaccaagg 499 |||||||||| | ||| ||| |||||| ||||||||||||||| ||||||||||||||| Sbjct: 449 ttgaagggttagctggattcgctctggatgggttgcggatgacaaagccatcaaccaagg 390 Query: 500 t-atagagatcagactgcacaagcaacaaatcagatgtagccttcacgggcagaaacctt 558 | || |||||||||||||||||||||| |||||||||||||||||| || ||||||||| Sbjct: 389 tgttaaagatcagactgcacaagcaacagatcagatgtagccttcactgggagaaacctt 330 Query: 559 gagcggggaacattgatgccgattgctttctcaaagaacc 598 |||||||||||||| || || || ||||| || ||||||| Sbjct: 329 gagcggggaacattaattccaatcgctttgtcgaagaacc 290
>gb|BT018223.1| Zea mays clone EL01N0561D12.c mRNA sequence Length = 1307 Score = 206 bits (104), Expect = 6e-50 Identities = 161/180 (89%) Strand = Plus / Minus Query: 418 ttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccgggttgcgg 477 ||||||||||| |||||||||||||||||||| | ||| ||| |||||| ||||||||| Sbjct: 232 ttgaactcaggtccaagctcaattgaagggttagctggattcgctctggatgggttgcgg 173 Query: 478 atgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgta 537 |||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 172 atgacaaagccatcaaccaaggtgtaaagatcagactgcacaagcaacagatcagatgta 113 Query: 538 gccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaac 597 |||||||| || ||||||||||||||||||||||| || || || ||||| || |||||| Sbjct: 112 gccttcactgggagaaaccttgagcggggaacattaattccaatcgctttgtcgaagaac 53 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 321 tccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggg 380 ||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 653 tccagagccaaaccagacatcaccagaaaccttcaagctgtcaagctcaactatgctggg 594 Query: 381 gatcgacttgaaacgggcaaggaagttggcaacct 415 ||| |||||||| || |||||||| |||||||||| Sbjct: 593 gatggacttgaaccgagcaaggaaattggcaacct 559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 236 ccttgttctcaagcaccgctccgtctgggatctccaacttgactccagccttggcg 291 ||||||||||||| || |||| ||||| ||||||||||| ||||||| ||||||| Sbjct: 1062 ccttgttctcaagtacgtctccatctggaatctccaacttcactccaggcttggcg 1007
>ref|XM_463887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1769 Score = 174 bits (88), Expect = 2e-40 Identities = 316/392 (80%) Strand = Plus / Minus Query: 217 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 276 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1460 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1401 Query: 277 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 336 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1400 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1341 Query: 337 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 396 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| || Sbjct: 1340 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaagcga 1281 Query: 397 gcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatggc 456 ||||||| | ||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 1280 ccaaggaaacacccgaccttcttgaactctggacccagttcaattgagggattcgatggg 1221 Query: 457 ttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactgc 516 || ||||||||||||||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 1220 tttgttctggccgggttgcgtgtaacaaagccatcaaccaaggtatatagatcagactgt 1161 Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 || ||| |||||| ||||| |||||||| || || |||| || | ||||||||||| Sbjct: 1160 actagctgcaaatctgatgttgccttcactggtaggaaccgggaccttggaacattgata 1101 Query: 577 ccgattgctttctcaaagaacctgatcgctgc 608 || ||||| | |||||||||||||| ||||| Sbjct: 1100 ccaattgcgtgatcaaagaacctgattgctgc 1069
>gb|AF249880.1|AF249880 Oryza sativa subsp. indica UDP-glucose pyrophosphorylase (UDPGase) mRNA, complete cds Length = 1746 Score = 174 bits (88), Expect = 2e-40 Identities = 316/392 (80%) Strand = Plus / Minus Query: 217 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 276 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1447 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1388 Query: 277 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 336 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1387 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1328 Query: 337 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 396 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| || Sbjct: 1327 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaagcga 1268 Query: 397 gcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatggc 456 ||||||| | ||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 1267 ccaaggaaacacccgaccttcttgaactctggacccagttcaattgagggattcgatggg 1208 Query: 457 ttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactgc 516 || ||||||||||||||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 1207 tttgttctggccgggttgcgtgtaacaaagccatcaaccaaggtatatagatcagactgt 1148 Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 || ||| |||||| ||||| |||||||| || || |||| || | ||||||||||| Sbjct: 1147 actagctgcaaatctgatgttgccttcactggtaggaaccgggaccttggaacattgata 1088 Query: 577 ccgattgctttctcaaagaacctgatcgctgc 608 || ||||| | |||||||||||||| ||||| Sbjct: 1087 ccaattgcgtgatcaaagaacctgattgctgc 1056
>dbj|AK071248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D10, full insert sequence Length = 1769 Score = 174 bits (88), Expect = 2e-40 Identities = 316/392 (80%) Strand = Plus / Minus Query: 217 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 276 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1460 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1401 Query: 277 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 336 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1400 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1341 Query: 337 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 396 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| || Sbjct: 1340 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaagcga 1281 Query: 397 gcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggttcgatggc 456 ||||||| | ||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 1280 ccaaggaaacacccgaccttcttgaactctggacccagttcaattgagggattcgatggg 1221 Query: 457 ttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagatcagactgc 516 || ||||||||||||||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 1220 tttgttctggccgggttgcgtgtaacaaagccatcaaccaaggtatatagatcagactgt 1161 Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 || ||| |||||| ||||| |||||||| || || |||| || | ||||||||||| Sbjct: 1160 actagctgcaaatctgatgttgccttcactggtaggaaccgggaccttggaacattgata 1101 Query: 577 ccgattgctttctcaaagaacctgatcgctgc 608 || ||||| | |||||||||||||| ||||| Sbjct: 1100 ccaattgcgtgatcaaagaacctgattgctgc 1069
>gb|AF203909.1|AF203909 Musa acuminata UDP-glucose pyrophosphorylase (MWUGPA) mRNA, complete cds Length = 1722 Score = 151 bits (76), Expect = 3e-33 Identities = 280/348 (80%) Strand = Plus / Minus Query: 209 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 268 |||| ||||| || ||||| ||||| |||||||||| || || ||||| || | ||||| Sbjct: 1479 ctcagatatcttcggggccattgatcaccttgttctcgaggacggctccatcagagatct 1420 Query: 269 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 328 ||||||| ||||||| ||| || ||||| |||| |||||||| ||||| ||||| | Sbjct: 1419 ccaactttactccagactttgcagcgatactcacattgcccttcagtactactccttcac 1360 Query: 329 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 388 ||||| | ||||||||||| ||||| ||||| |||||||| |||||||| || ||||||| Sbjct: 1359 caaaccaaacatcaccagaaacctttaagctatcaagctcaacgatgctaggtatcgact 1300 Query: 389 tgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctcaattgaagggt 448 ||||||| |||||||||||||||||| || || ||||| ||||| ||||||||||| | Sbjct: 1299 tgaaacgactaaggaagttggcaaccttcttaaattcaggcccaagttcaattgaaggat 1240 Query: 449 tcgatggcttcactctggccgggttgcggatgacatagccatcaaccaaggtatagagat 508 | || || || ||| || ||||| || ||| | ||||||||||| |||| |||| Sbjct: 1239 ttgagggatttgttctagctttattgcgaataacaaaaccatcaaccaacatatacagat 1180 Query: 509 cagactgcacaagcaacaaatcagatgtagccttcacgggcagaaacc 556 ||||||| || |||| |||||| || || |||||||| || ||||||| Sbjct: 1179 cagactgtactagcagcaaatctgaggttgccttcactggaagaaacc 1132
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 319 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 378 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 76980 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 76921 Query: 379 gggatcgacttgaaacgggcaaggaagttggcaacct 415 ||||| ||||| || ||||| ||||| |||||||||| Sbjct: 76920 gggattgacttaaaccgggccaggaaattggcaacct 76884 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 |||||||||||||||||||||||||| || |||||||| || |||||||||||||| ||| Sbjct: 76579 acaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaacattaatg 76520 Query: 577 ccgattgctttctcaaagaac 597 || |||||||| ||||||||| Sbjct: 76519 ccaattgctttttcaaagaac 76499 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 412 acctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccggg 471 ||||| ||||||||||| ||||||||||| |||||||| ||||| || |||||| ||| Sbjct: 76763 accttcttgaactcaggtccaagctcaatcgaagggtttgatgggtttgttctggctggg 76704 Query: 472 ttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 |||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 76703 ttgcggatgacaaagccatcgaccaaggtgtacaaatcagactg 76660 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 236 ccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 77270 ccttgttctcaagcacggctccatctgggatctccaactt 77231
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 319 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 378 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 21620354 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 21620295 Query: 379 gggatcgacttgaaacgggcaaggaagttggcaacct 415 ||||| ||||| || ||||| ||||| |||||||||| Sbjct: 21620294 gggattgacttaaaccgggccaggaaattggcaacct 21620258 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 |||||||||||||||||||||||||| || |||||||| || |||||||||||||| ||| Sbjct: 21619953 acaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaacattaatg 21619894 Query: 577 ccgattgctttctcaaagaac 597 || |||||||| ||||||||| Sbjct: 21619893 ccaattgctttttcaaagaac 21619873 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 412 acctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccggg 471 ||||| ||||||||||| ||||||||||| |||||||| ||||| || |||||| ||| Sbjct: 21620137 accttcttgaactcaggtccaagctcaatcgaagggtttgatgggtttgttctggctggg 21620078 Query: 472 ttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 |||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 21620077 ttgcggatgacaaagccatcgaccaaggtgtacaaatcagactg 21620034 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 236 ccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 21620644 ccttgttctcaagcacggctccatctgggatctccaactt 21620605
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 319 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 378 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 28678 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 28619 Query: 379 gggatcgacttgaaacgggcaaggaagttggcaacct 415 ||||| ||||| || ||||| ||||| |||||||||| Sbjct: 28618 gggattgacttaaaccgggccaggaaattggcaacct 28582 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 517 acaagcaacaaatcagatgtagccttcacgggcagaaaccttgagcggggaacattgatg 576 |||||||||||||||||||||||||| || |||||||| || |||||||||||||| ||| Sbjct: 28277 acaagcaacaaatcagatgtagccttgactggcagaaatctcgagcggggaacattaatg 28218 Query: 577 ccgattgctttctcaaagaac 597 || |||||||| ||||||||| Sbjct: 28217 ccaattgctttttcaaagaac 28197 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 412 acctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccggg 471 ||||| ||||||||||| ||||||||||| |||||||| ||||| || |||||| ||| Sbjct: 28461 accttcttgaactcaggtccaagctcaatcgaagggtttgatgggtttgttctggctggg 28402 Query: 472 ttgcggatgacatagccatcaaccaaggtatagagatcagactg 515 |||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 28401 ttgcggatgacaaagccatcgaccaaggtgtacaaatcagactg 28358 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 236 ccttgttctcaagcaccgctccgtctgggatctccaactt 275 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 28968 ccttgttctcaagcacggctccatctgggatctccaactt 28929
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 412 acctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccggg 471 ||||| |||||||| ||||| || |||||||| || |||||||| || |||||||||| Sbjct: 927127 accttcttgaactctggacccagttcaattgagggattcgatgggtttgttctggccggg 927186 Query: 472 ttgcggatgacatagccatcaaccaaggtatagagatcagactgca 517 ||||| | ||| ||||||||||||||||||| ||||||||||||| Sbjct: 927187 ttgcgtgtaacaaagccatcaaccaaggtatatagatcagactgca 927232 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggat 383 |||||||||| | |||||||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 926943 agagccaaaccaaacatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggat 927002 Query: 384 cgacttgaa 392 |||||||| Sbjct: 927003 tgacttgaa 927011
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 412 acctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggccggg 471 ||||| |||||||| ||||| || |||||||| || |||||||| || |||||||||| Sbjct: 136335 accttcttgaactctggacccagttcaattgagggattcgatgggtttgttctggccggg 136394 Query: 472 ttgcggatgacatagccatcaaccaaggtatagagatcagactgca 517 ||||| | ||| ||||||||||||||||||| ||||||||||||| Sbjct: 136395 ttgcgtgtaacaaagccatcaaccaaggtatatagatcagactgca 136440 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggat 383 |||||||||| | |||||||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 136151 agagccaaaccaaacatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggat 136210 Query: 384 cgacttgaa 392 |||||||| Sbjct: 136211 tgacttgaa 136219
>gb|AY082622.1| Solanum tuberosum BelRus UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 89.7 bits (45), Expect = 1e-14 Identities = 164/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || |||| ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcgatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| ||| |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattcgacctggcc 1176 Query: 469 gggttgcggatgacatagccatcaac---caaggtatagagatcagactgcacaagcaac 525 ||||| ||||| |||||||| ||| | |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1115 aaatctgaagttgctttcacggg 1093
>gb|DQ191641.1| Solanum tuberosum UDP-glucose pyrophosphorylase-like protein mRNA, complete cds Length = 1671 Score = 81.8 bits (41), Expect = 2e-12 Identities = 163/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1366 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1307 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| || |||||| Sbjct: 1306 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattagacctggcc 1247 Query: 469 gggttgcggatgacatagc---catcaaccaaggtatagagatcagactgcacaagcaac 525 ||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||| | | Sbjct: 1246 gggtttcggatgacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1187 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1186 aaatctgaagttgctttcacggg 1164
>gb|AY082623.1| Solanum tuberosum Russet Burbank-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 81.8 bits (41), Expect = 2e-12 Identities = 163/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| ||| |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattcgacctggcc 1176 Query: 469 gggttgcggatgacatagccatcaac---caaggtatagagatcagactgcacaagcaac 525 ||||| ||||| |||||||| ||| | |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1115 aaatctgaagttgctttcacggg 1093
>gb|AY082621.1| Solanum tuberosum Redsen UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 81.8 bits (41), Expect = 2e-12 Identities = 163/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| ||| |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattcgacctggcc 1176 Query: 469 gggttgcggatgacatagccatcaac---caaggtatagagatcagactgcacaagcaac 525 ||||| ||||| |||||||| ||| | |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1115 aaatctgaagttgctttcacggg 1093
>gb|AY082620.1| Solanum tuberosum Norchip UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 81.8 bits (41), Expect = 2e-12 Identities = 163/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| ||| |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattcgacctggcc 1176 Query: 469 gggttgcggatgacatagccatcaac---caaggtatagagatcagactgcacaagcaac 525 ||||| ||||| |||||||| ||| | |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1115 aaatctgaagttgcattcacggg 1093
>dbj|D00667.1|POTUDPGP Solanum tuberosum mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1758 Score = 81.8 bits (41), Expect = 2e-12 Identities = 163/203 (80%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1434 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1375 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| ||| |||||| Sbjct: 1374 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattcgacctggcc 1315 Query: 469 gggttgcggatgacatagccatcaac---caaggtatagagatcagactgcacaagcaac 525 ||||| ||||| |||||||| ||| | |||||| || ||||||||||| ||||| | | Sbjct: 1314 gggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1255 Query: 526 aaatcagatgtagccttcacggg 548 ||||| || || || |||||||| Sbjct: 1254 aaatctgaagttgctttcacggg 1232
>emb|Z18924.1|STUDPGPYP S.tuberosum mRNA for UDP-glucose pyrophosphorylase Length = 1683 Score = 77.8 bits (39), Expect = 4e-11 Identities = 149/185 (80%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1378 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1319 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| || |||||| Sbjct: 1318 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattagacctggcc 1259 Query: 469 gggttgcggatgacatagc---catcaaccaaggtatagagatcagactgcacaagcaac 525 ||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||| | | Sbjct: 1258 gggtttcggatgacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1199 Query: 526 aaatc 530 ||||| Sbjct: 1198 aaatc 1194
>gb|AY082619.1| Solanum tuberosum Russet Burbank-1 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 77.8 bits (39), Expect = 4e-11 Identities = 149/185 (80%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| || |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattagacctggcc 1176 Query: 469 gggttgcggatgacatagc---catcaaccaaggtatagagatcagactgcacaagcaac 525 ||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggatgacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatc 530 ||||| Sbjct: 1115 aaatc 1111
>gb|AY082618.1| Solanum tuberosum ND860-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 77.8 bits (39), Expect = 4e-11 Identities = 149/185 (80%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| || |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattagacctggcc 1176 Query: 469 gggttgcggatgacatagc---catcaaccaaggtatagagatcagactgcacaagcaac 525 ||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggatgacatagccctcatcagtcaaggtgtaaagatcagactggacaaggagc 1116 Query: 526 aaatc 530 ||||| Sbjct: 1115 aaatc 1111
>gb|AY082617.1| Solanum tuberosum Snowden UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 77.8 bits (39), Expect = 4e-11 Identities = 149/185 (80%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 1236 Query: 409 gcaacctttttgaactcaggaccaagctcaattgaagggttcgatggcttcactctggcc 468 || ||||| ||||| ||||| || | ||| || || ||||| ||||| || |||||| Sbjct: 1235 gccaccttcttgaattcaggtcccaactcgatggatgggttggatggattagacctggcc 1176 Query: 469 gggttgcggatgacatagc---catcaaccaaggtatagagatcagactgcacaagcaac 525 ||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||| | | Sbjct: 1175 gggtttcggatgacatagccctcatcagtcaaggtgtaaagatcagactgaacaaggagc 1116 Query: 526 aaatc 530 ||||| Sbjct: 1115 aaatc 1111
>dbj|AB055502.1| Nicotiana tabacum NtUGPase mRNA for UDP-glucose pyrophosphorylase, partial cds Length = 1128 Score = 67.9 bits (34), Expect = 4e-08 Identities = 165/208 (79%), Gaps = 3/208 (1%) Strand = Plus / Minus Query: 319 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 378 |||||||| |||||| | |||||||| | ||||| ||||| || || || | ||||||| Sbjct: 1043 actccagatccaaaccatacatcacccgtcacctttaagctatctagatcaatgatgctg 984 Query: 379 gggatcgacttgaaacgggcaaggaagttggcaacctttttgaactcaggaccaagctca 438 || || ||||||||||| | | ||||||||| ||||| ||||| ||||| || | ||| Sbjct: 983 ggaatagacttgaaacgacctaagaagttggccaccttcttgaattcaggtcccaactcg 924 Query: 439 attgaagggttcgatggcttcactctggccgggttgcggatgacatagc---catcaacc 495 || | ||||| ||||| || ||||||||||| ||||||||||||| ||||| | Sbjct: 923 atagctgggtttgatggattagacctggccgggttccggatgacatagccttcatcagtc 864 Query: 496 aaggtatagagatcagactgcacaagca 523 ||||| || ||||||||||| ||||||| Sbjct: 863 aaggtgtaaagatcagactggacaagca 836
>ref|NM_111195.2| Arabidopsis thaliana UGP; UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT3G03250 (UGP) mRNA, complete cds Length = 1837 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1286 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1227 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1226 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1167 Query: 599 tgatcgc 605 | ||||| Sbjct: 1166 ttatcgc 1160 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1441 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1394
>gb|AY059148.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1441 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1141 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1082 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1081 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1022 Query: 599 tgatcgc 605 | ||||| Sbjct: 1021 ttatcgc 1015 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1296 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1249
>gb|AY035071.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1227 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1168 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1167 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1108 Query: 599 tgatcgc 605 | ||||| Sbjct: 1107 ttatcgc 1101 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1382 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1335
>gb|AF361605.1| Arabidopsis thaliana AT3g03250/T17B22_6 mRNA, complete cds Length = 1739 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1212 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1153 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1152 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1093 Query: 599 tgatcgc 605 | ||||| Sbjct: 1092 ttatcgc 1086 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1367 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1320
>emb|BX825911.1|CNS0A4WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1204 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1145 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1144 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1085 Query: 599 tgatcgc 605 | ||||| Sbjct: 1084 ttatcgc 1078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1359 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1312
>emb|BX823422.1|CNS0A4T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactgcacaagcaacaaatcagatgtag 538 ||||| |||||||||| ||||| |||||||||||||| || |||| ||| || || | | Sbjct: 1151 tgacaaagccatcaactaaggtgtagagatcagactggacgagcagcaagtctgaacttg 1092 Query: 539 ccttcacgggcagaaaccttgagcggggaacattgatgccgattgctttctcaaagaacc 598 ||||||| |||| |||| |||||| || ||||| | ||||| || || |||||||||| Sbjct: 1091 ccttcactggcaagaaccgtgagcgaggtacattaacaccgatagcgttgtcaaagaacc 1032 Query: 599 tgatcgc 605 | ||||| Sbjct: 1031 ttatcgc 1025 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1306 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1259
>dbj|AB013353.1| Pyrus pyrifolia mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1699 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 335 agacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 392 ||||||||||||| ||||| | ||| |||||||| | |||||||||||| |||||||| Sbjct: 1379 agacatcaccagaaaccttaaggctctcaagctcaaggatgctggggattgacttgaa 1322
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 324 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 371 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 30506 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 30459 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 479 tgacatagccatcaaccaaggtatagagatcagactg 515 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 30264 tgacaaagccatcaactaaggtgtagagatcagactg 30228
>ref|NM_180506.1| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.1 mRNA, complete cds Length = 1516 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1120 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1061 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1060 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1001 Query: 418 ttgaa 422 ||||| Sbjct: 1000 ttgaa 996 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1202 atcctctggaccgttgatgtccttattctcgagcac 1167
>ref|NM_121737.2| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.2 mRNA, complete cds Length = 1798 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1402 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1343 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1342 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1283 Query: 418 ttgaa 422 ||||| Sbjct: 1282 ttgaa 1278 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1484 atcctctggaccgttgatgtccttattctcgagcac 1449
>gb|AY040042.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1413 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1325 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1266 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1265 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1206 Query: 418 ttgaa 422 ||||| Sbjct: 1205 ttgaa 1201 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1407 atcctctggaccgttgatgtccttattctcgagcac 1372
>gb|AF360244.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1628 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1402 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1343 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1342 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1283 Query: 418 ttgaa 422 ||||| Sbjct: 1282 ttgaa 1278 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1484 atcctctggaccgttgatgtccttattctcgagcac 1449
>gb|AF361816.1| Arabidopsis thaliana AT5g17310/MKP11_16 mRNA, complete cds Length = 1800 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1403 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1344 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1343 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1284 Query: 418 ttgaa 422 ||||| Sbjct: 1283 ttgaa 1279 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1485 atcctctggaccgttgatgtccttattctcgagcac 1450
>emb|BX831255.1|CNS0A26Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1571 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagaccttcaag 357 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| | Sbjct: 1382 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagaccttaaga 1323 Query: 358 ctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttggcaaccttt 417 || || ||||| || || || ||||| |||||||| ||| |||||| | || |||||| Sbjct: 1322 ctatcgagctcaactatactcgggatggacttgaaccggctaaggaaactcgctaccttt 1263 Query: 418 ttgaa 422 ||||| Sbjct: 1262 ttgaa 1258 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 216 atcctctgggccgttgatgtccttgttctcaagcac 251 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1464 atcctctggaccgttgatgtccttattctcgagcac 1429
>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11 Length = 75188 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 298 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 353 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 56123 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 56178
>gb|U20345.1|STU20345 Solanum tuberosum UDP-glucose pyrophosphorylase (UGPase) gene, UGPase-Lemhi10 allele, complete cds Length = 7646 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 349 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgggcaaggaagttg 408 ||||||||||| || || || | ||||||||| || |||||||||||| | | ||||||| Sbjct: 7180 accttcaagctatcgagatcaatgatgctgggaatagacttgaaacggcctaagaagttg 7121 Query: 409 gcaacct 415 || |||| Sbjct: 7120 gccacct 7114 Score = 40.1 bits (20), Expect = 8.3 Identities = 49/58 (84%), Gaps = 3/58 (5%) Strand = Plus / Minus Query: 463 ctggccgggttgcggatgacatagc---catcaaccaaggtatagagatcagactgca 517 ||||||||||| ||||| ||||||| ||||| |||||| || ||||||||||||| Sbjct: 6989 ctggccgggtttcggataacatagccctcatcagtcaaggtgtaaagatcagactgca 6932
>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163709 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tggggatcgacttgaaacggg 397 ||||||||||||||||||||| Sbjct: 124647 tggggatcgacttgaaacggg 124627
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tggggatcgacttgaaacggg 397 ||||||||||||||||||||| Sbjct: 281476 tggggatcgacttgaaacggg 281456
>ref|NM_128011.3| Arabidopsis thaliana FZF; transcription factor AT2G24500 (FZF) mRNA, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 427 gctcaattgaagggttcgat 446
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ggcgggcaggcgggtgaacg 205 |||||||||||||||||||| Sbjct: 3059650 ggcgggcaggcgggtgaacg 3059631
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggtgggcgggcaggcgggtg 201 |||||||||||||||||||| Sbjct: 98734 ggtgggcgggcaggcgggtg 98753
>ref|XM_754216.1| Ustilago maydis 521 hypothetical protein (UM03162.1) partial mRNA Length = 2046 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gctgtcaagctcgacgatgc 376 |||||||||||||||||||| Sbjct: 526 gctgtcaagctcgacgatgc 545
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gacatcaccagagaccttca 355 |||||||||||||||||||| Sbjct: 114519 gacatcaccagagaccttca 114538
>gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 accagagaccttcaagctgt 361 |||||||||||||||||||| Sbjct: 86344 accagagaccttcaagctgt 86363
>emb|AL162852.14| Human DNA sequence from clone RP11-267I18 on chromosome 13 Contains a novel gene, complete sequence Length = 110166 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gttattatgtaacagggctc 88 |||||||||||||||||||| Sbjct: 97072 gttattatgtaacagggctc 97091
>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the 5' end of the BFSP1 gene for beaded filament structural protein 1 (filensin), the DSTN gene for destrin (actin depolymerizing factor ADF), a ras-like pseudogene, the RRBP1 gene for ribosome binding protein 1 (dog 180 kDa homolog), the 5' end of the C20orf179 gene for chromosome 20 open reading frame 179 and two CpG islands, complete sequence Length = 166001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctggcactcccaggaagaac 34 |||||||||||||||||||| Sbjct: 126669 ctggcactcccaggaagaac 126650
>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the Kcnj12 gene for potassium inwardly-rectifying channel subfamily J member 12, a ribosomal protein L27a (Rpl27a) pseudogene, the Tnfrsf13b gene for tumor necrosis factor receptor superfamily member 13b, the Usp22 gene for ubiquitin specific protease 22, a ribosomal protein S13 (Rps13) pseudogene, the Aldh3a1 gene for aldehyde dehydrogenase family 3 subfamily A1, the 3' end of one variant of the Aldh3a2 gene for aldehyde dehydrogenase family 3 subfamily A2 and three CpG islands, complete sequence Length = 241400 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggtgggcgggcaggcgggtg 201 |||||||||||||||||||| Sbjct: 17683 ggtgggcgggcaggcgggtg 17664
>gb|AY942707.1| Streptomyces noursei ATCC 11455 lantibiotic biosynthesis gene cluster, complete sequence Length = 13830 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggtgggcgggcaggcgggtg 201 |||||||||||||||||||| Sbjct: 5072 ggtgggcgggcaggcgggtg 5091
>gb|AY114695.1| Arabidopsis thaliana putative C2H2-type zinc finger protein (At2g24500) mRNA, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 364 gctcaattgaagggttcgat 383
>gb|AC006403.4| Arabidopsis thaliana chromosome 2 clone T28I24 map mi238, complete sequence Length = 79555 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 66304 gctcaattgaagggttcgat 66285
>gb|AY062620.1| Arabidopsis thaliana putative C2H2-type zinc finger protein (At2g24500; T28I24.23) mRNA, complete cds Length = 1472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 425 gctcaattgaagggttcgat 444
>gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 map 11, complete sequence Length = 264908 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggtgggcgggcaggcgggtg 201 |||||||||||||||||||| Sbjct: 195150 ggtgggcgggcaggcgggtg 195131
>emb|BX004831.16| Zebrafish DNA sequence from clone BUSM1-143H6 in linkage group 7, complete sequence Length = 119156 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 accagagaccttcaagctgt 361 |||||||||||||||||||| Sbjct: 69415 accagagaccttcaagctgt 69434
>emb|BX820041.1|CNS0A9HE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1459 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 427 gctcaattgaagggttcgat 446
>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7, complete sequence Length = 144689 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 accagagaccttcaagctgt 361 |||||||||||||||||||| Sbjct: 15261 accagagaccttcaagctgt 15280
>gb|AF095588.1|AF095588 Arabidopsis thaliana C2H2 zinc finger protein FZF mRNA, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctcaattgaagggttcgat 453 |||||||||||||||||||| Sbjct: 382 gctcaattgaagggttcgat 401
>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggtgggcgggcaggcgggtg 201 |||||||||||||||||||| Sbjct: 135177 ggtgggcgggcaggcgggtg 135196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,346,162 Number of Sequences: 3902068 Number of extensions: 4346162 Number of successful extensions: 182798 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 182515 Number of HSP's gapped (non-prelim): 256 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
