ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37d20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
2dbj|AK104052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
3dbj|AK073887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
4ref|XM_463621.1| Oryza sativa (japonica cultivar-group), predic... 60 1e-05
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
6dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
7dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
8dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
9dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
10gb|AY109611.1| Zea mays CL37807_1 mRNA sequence 46 0.15
11gb|BC015563.2| Homo sapiens guanine nucleotide binding protein (... 42 2.3
12ref|XM_581753.2| PREDICTED: Bos taurus similar to CG6745-PA (LOC... 42 2.3
13ref|NM_012202.1| Homo sapiens guanine nucleotide binding protein... 42 2.3
14gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete... 42 2.3
15emb|BX284652.4| Human DNA sequence from clone RP11-66A2 on chrom... 42 2.3
16emb|AL356503.18| Human DNA sequence from clone RP13-159A24 on ch... 42 2.3
17gb|AF087900.1| Homo sapiens guanine nucleotide-binding protein g... 42 2.3
18emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 42 2.3
19gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, compl... 42 2.3
20emb|CR625883.1| full-length cDNA clone CS0DF035YO23 of Fetal bra... 42 2.3
21emb|CR620191.1| full-length cDNA clone CS0DF030YJ17 of Fetal bra... 42 2.3
22gb|AF092129.1|AF092129 Homo sapiens guanine nucleotide binding p... 42 2.3
23emb|BX640476.7| Zebrafish DNA sequence from clone DKEY-57C9 in l... 42 2.3
24emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 m... 42 2.3
25emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-3... 42 2.3
26emb|AL352982.3|CNS05TBY Human chromosome 14 DNA sequence Partial... 42 2.3
27dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
28emb|AL773542.11| Zebrafish DNA sequence from clone CH211-174L22,... 42 2.3
29gb|AC109279.13| Mus musculus chromosome 1, clone RP23-333O12, co... 40 9.0
30gb|AC107645.28| Mus musculus chromosome 15, clone RP23-78J21, co... 40 9.0
31gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, co... 40 9.0
32gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, co... 40 9.0
33gb|AC125537.4| Mus musculus BAC clone RP24-165M1 from chromosome... 40 9.0
34gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, compl... 40 9.0
35emb|CR731907.2|CNS0GROO Tetraodon nigroviridis full-length cDNA 40 9.0
36emb|BX640467.12| Zebrafish DNA sequence from clone CH211-14C11 i... 40 9.0
37emb|AL929104.3| Zebrafish DNA sequence from clone DKEY-61O11 in ... 40 9.0
38gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete se... 40 9.0
39gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, comp... 40 9.0
40gb|AC022337.24| Homo sapiens 3 BAC RP11-87O3 (Roswell Park Cance... 40 9.0
41gb|AC104967.4| Homo sapiens chromosome 8, clone CTD-2306F16, com... 40 9.0
42gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, comp... 40 9.0
43gb|AC025218.8| Homo sapiens chromosome 8, clone RP11-275J3, comp... 40 9.0
44gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, com... 40 9.0
45gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer... 40 9.0
46gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, comp... 40 9.0
47gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3... 40 9.0
48gb|AC108012.4| Homo sapiens BAC clone RP13-513D3 from 4, complet... 40 9.0
49gb|AC092660.2| Homo sapiens BAC clone RP11-502A5 from 2, complet... 40 9.0
50gb|AY108289.1| Zea mays PCO091564 mRNA sequence 40 9.0
51emb|AJ276228.1|TBO276228 Tuber borchii chs3 gene for chitin synt... 40 9.0
52dbj|AP006300.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.0
53emb|AL929192.16| Zebrafish DNA sequence from clone CH211-250E5 i... 40 9.0
54emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 9.0
55dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC c... 40 9.0 
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                          
Query: 559    ggaaggtaaatgcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttc 618
              ||||||||||| |||||||| ||||||  | ||||   ||| | ||| ||||||||||||
Sbjct: 142590 ggaaggtaaatacggtggaaattgttcgccctcagactctttctgcaagtagggcatttc 142649

                                                         
Query: 619    ttctggaactgaatggcttgcttgatgcagtttgtgcagaaga 661
              ||||| | ||| |||||||||||||||||  | ||||||||||
Sbjct: 142650 ttctgaatctggatggcttgcttgatgcatgtcgtgcagaaga 142692
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>dbj|AK104052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C12, full
           insert sequence
          Length = 969

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                       
Query: 559 ggaaggtaaatgcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttc 618
           ||||||||||| |||||||| ||||||  | ||||   ||| | ||| ||||||||||||
Sbjct: 566 ggaaggtaaatacggtggaaattgttcgccctcagactctttctgcaagtagggcatttc 507

                                                      
Query: 619 ttctggaactgaatggcttgcttgatgcagtttgtgcagaaga 661
           ||||| | ||| |||||||||||||||||  | ||||||||||
Sbjct: 506 ttctgaatctggatggcttgcttgatgcatgtcgtgcagaaga 464
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>dbj|AK073887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P09, full
           insert sequence
          Length = 1146

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                       
Query: 559 ggaaggtaaatgcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttc 618
           ||||||||||| |||||||| ||||||  | ||||   ||| | ||| ||||||||||||
Sbjct: 743 ggaaggtaaatacggtggaaattgttcgccctcagactctttctgcaagtagggcatttc 684

                                                      
Query: 619 ttctggaactgaatggcttgcttgatgcagtttgtgcagaaga 661
           ||||| | ||| |||||||||||||||||  | ||||||||||
Sbjct: 683 ttctgaatctggatggcttgcttgatgcatgtcgtgcagaaga 641
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>ref|XM_463621.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 570 gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
           ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 135 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 82
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 570      gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
                ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 40114012 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 40113959
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>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 570   gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
             ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 57096 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 57043
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>dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D05, full
           insert sequence
          Length = 1095

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 570 gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
           ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 911 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 858
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>dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M15, full
           insert sequence
          Length = 1243

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 570 gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
           ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 994 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 941
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>dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D10, full
           insert sequence
          Length = 1147

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 570 gcggtggaagttgttcatcttcaggtgcttccggcaggtagggcatttcttctg 623
           ||||||||||||||||||  |||| | | |||||||||||||||| ||||||||
Sbjct: 911 gcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttcttctg 858
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>gb|AY109611.1| Zea mays CL37807_1 mRNA sequence
          Length = 1261

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 597 cttccggcaggtagggcatttcttctggaactgaatggcttgcttgatgca 647
           ||||| ||| ||||||||||||||||| | ||  ||||| |||||||||||
Sbjct: 433 cttcctgcaagtagggcatttcttctgaaccttgatggcctgcttgatgca 483
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>gb|BC015563.2| Homo sapiens guanine nucleotide binding protein (G protein), gamma
           3, mRNA (cDNA clone MGC:12634 IMAGE:4124714), complete
           cds
          Length = 844

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 127 acccatttcaggcagaaggtt 147
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>ref|XM_581753.2| PREDICTED: Bos taurus similar to CG6745-PA (LOC505464), mRNA
          Length = 3161

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 agcctaatacatcaacatttt 314
           |||||||||||||||||||||
Sbjct: 856 agcctaatacatcaacatttt 836
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>ref|NM_012202.1| Homo sapiens guanine nucleotide binding protein (G protein), gamma
           3 (GNG3), mRNA
          Length = 912

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 183 acccatttcaggcagaaggtt 203
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>gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete sequence
          Length = 221352

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    gactaaaatcttgataaaatg 171
              |||||||||||||||||||||
Sbjct: 127113 gactaaaatcttgataaaatg 127133
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>emb|BX284652.4| Human DNA sequence from clone RP11-66A2 on chromosome 1 Contains the 3'
             end of a novel gene and a novel gene (FLJ35881), complete
             sequence
          Length = 49477

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   ataaaatgctgggcagtcact 184
             |||||||||||||||||||||
Sbjct: 25694 ataaaatgctgggcagtcact 25674
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>emb|AL356503.18| Human DNA sequence from clone RP13-159A24 on chromosome Xq27.1-28,
             complete sequence
          Length = 147043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 305   tcaacatttttatgttgccacaaaa 329
             |||||||||||||||||||| ||||
Sbjct: 95549 tcaacatttttatgttgccaaaaaa 95573
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>gb|AF087900.1| Homo sapiens guanine nucleotide-binding protein gamma-3 subunit
           mRNA, complete cds
          Length = 900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 183 acccatttcaggcagaaggtt 203
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 155     aaaatcttgataaaatgctgg 175
               |||||||||||||||||||||
Sbjct: 1830709 aaaatcttgataaaatgctgg 1830729
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>gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, complete sequence
          Length = 70380

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 295   gcctaatacatcaacatttttatgt 319
             ||||||||||||||||| |||||||
Sbjct: 44635 gcctaatacatcaacatatttatgt 44659
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>emb|CR625883.1| full-length cDNA clone CS0DF035YO23 of Fetal brain of Homo sapiens
           (human)
          Length = 804

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 104 acccatttcaggcagaaggtt 124
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>emb|CR620191.1| full-length cDNA clone CS0DF030YJ17 of Fetal brain of Homo sapiens
           (human)
          Length = 705

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 5   acccatttcaggcagaaggtt 25
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>gb|AF092129.1|AF092129 Homo sapiens guanine nucleotide binding protein gamma-3 subunit mRA
           mRNA, complete cds
          Length = 912

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 acccatttcaggcagaaggtt 418
           |||||||||||||||||||||
Sbjct: 183 acccatttcaggcagaaggtt 203
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>emb|BX640476.7| Zebrafish DNA sequence from clone DKEY-57C9 in linkage group 21,
             complete sequence
          Length = 127139

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   aaaaaatatataatggaaggc 346
             |||||||||||||||||||||
Sbjct: 73741 aaaaaatatataatggaaggc 73761
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>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete
              sequence
          Length = 220032

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 305    tcaacatttttatgttgccacaaaa 329
              |||||||||||||||||||| ||||
Sbjct: 192535 tcaacatttttatgttgccaaaaaa 192559
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>emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-304L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193559

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 214    agtaaagaagcaccaaatattattt 238
              ||||||| |||||||||||||||||
Sbjct: 125134 agtaaagcagcaccaaatattattt 125158
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>emb|AL352982.3|CNS05TBY Human chromosome 14 DNA sequence Partial sequence from BAC R-661F4 of
             library RPCI-11 from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 157058

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 214   agtaaagaagcaccaaatattattt 238
             ||||||| |||||||||||||||||
Sbjct: 11097 agtaaagcagcaccaaatattattt 11073
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>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
              sequence
          Length = 177433

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 398    acccatttcaggcagaaggtt 418
              |||||||||||||||||||||
Sbjct: 115106 acccatttcaggcagaaggtt 115126
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>emb|AL773542.11| Zebrafish DNA sequence from clone CH211-174L22, complete sequence
          Length = 163443

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   aaaaaatatataatggaaggc 346
             |||||||||||||||||||||
Sbjct: 97526 aaaaaatatataatggaaggc 97546
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>gb|AC109279.13| Mus musculus chromosome 1, clone RP23-333O12, complete sequence
          Length = 199028

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    catgactatgaagtgcccct 103
             ||||||||||||||||||||
Sbjct: 78286 catgactatgaagtgcccct 78267
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>gb|AC107645.28| Mus musculus chromosome 15, clone RP23-78J21, complete sequence
          Length = 240912

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     aaaactcaaagtgaaattac 60
              ||||||||||||||||||||
Sbjct: 105596 aaaactcaaagtgaaattac 105577
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>gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, complete sequence
          Length = 155145

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   acatttttatgttgccacaaaaaa 331
             |||||||||||||| |||||||||
Sbjct: 22017 acatttttatgttgtcacaaaaaa 22040
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>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence
          Length = 202071

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   actaaaatcttgataaaatg 171
             ||||||||||||||||||||
Sbjct: 83230 actaaaatcttgataaaatg 83211
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>gb|AC125537.4| Mus musculus BAC clone RP24-165M1 from chromosome 12, complete sequence
          Length = 167744

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   gcatttcttctggaactgaa 631
             ||||||||||||||||||||
Sbjct: 36311 gcatttcttctggaactgaa 36292
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>gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, complete sequence
          Length = 173567

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 612  gcatttcttctggaactgaa 631
            ||||||||||||||||||||
Sbjct: 7196 gcatttcttctggaactgaa 7215
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>emb|CR731907.2|CNS0GROO Tetraodon nigroviridis full-length cDNA
          Length = 1079

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 499  ctcctcagcagaagatccaccatg 522
            |||||||| |||||||||||||||
Sbjct: 998  ctcctcagtagaagatccaccatg 1021
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>emb|BX640467.12| Zebrafish DNA sequence from clone CH211-14C11 in linkage group 22,
             complete sequence
          Length = 111504

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ttgttcatcttcaggtgctt 599
             ||||||||||||||||||||
Sbjct: 74608 ttgttcatcttcaggtgctt 74589
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>emb|AL929104.3| Zebrafish DNA sequence from clone DKEY-61O11 in linkage group 14
             Contains the 5' part of a novel gene similar to vertebrate
             XPNPEP2 (membrane bound X-prolyl aminopeptidase
             (aminopeptidase P) 2) and three CpG islands, complete
             sequence
          Length = 187365

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gctgggcagtcacttcagaa 190
             ||||||||||||||||||||
Sbjct: 22114 gctgggcagtcacttcagaa 22095
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>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence
          Length = 138838

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ttgccacaaaaaatatataa 338
             ||||||||||||||||||||
Sbjct: 79985 ttgccacaaaaaatatataa 80004
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>gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, complete sequence
          Length = 159024

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    gtgatgatggtacaacaatg 498
              ||||||||||||||||||||
Sbjct: 113487 gtgatgatggtacaacaatg 113468
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>gb|AC022337.24| Homo sapiens 3 BAC RP11-87O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85148

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   cccatttccatacattcatc 475
             ||||||||||||||||||||
Sbjct: 54842 cccatttccatacattcatc 54861
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>gb|AC104967.4| Homo sapiens chromosome 8, clone CTD-2306F16, complete sequence
          Length = 144098

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    catcctcagccatactacct 140
              ||||||||||||||||||||
Sbjct: 104878 catcctcagccatactacct 104897
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>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence
          Length = 170722

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    catcctcagccatactacct 140
              ||||||||||||||||||||
Sbjct: 167556 catcctcagccatactacct 167537
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>gb|AC025218.8| Homo sapiens chromosome 8, clone RP11-275J3, complete sequence
          Length = 132202

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 324    acaaaaaatatataatggaaggctacat 351
              ||||||| |||||| |||||||||||||
Sbjct: 100010 acaaaaattatatattggaaggctacat 100037
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>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence
          Length = 170311

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   ggtgatgatggtacaacaat 497
             ||||||||||||||||||||
Sbjct: 89502 ggtgatgatggtacaacaat 89521
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>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 240079

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   acatttttatgttgccacaaaaaa 331
             |||||||||||||| |||||||||
Sbjct: 89903 acatttttatgttgtcacaaaaaa 89926
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>gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, complete sequence
          Length = 126746

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ggctacatgcaaatttgtta 363
             ||||||||||||||||||||
Sbjct: 63401 ggctacatgcaaatttgtta 63382
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>gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3, complete sequence
          Length = 160770

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ggctacatgcaaatttgtta 363
             ||||||||||||||||||||
Sbjct: 71327 ggctacatgcaaatttgtta 71346
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>gb|AC108012.4| Homo sapiens BAC clone RP13-513D3 from 4, complete sequence
          Length = 48578

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 154  taaaatcttgataaaatgctgggc 177
            ||||||||||| ||||||||||||
Sbjct: 6335 taaaatcttgaaaaaatgctgggc 6312
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>gb|AC092660.2| Homo sapiens BAC clone RP11-502A5 from 2, complete sequence
          Length = 154704

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 609    agggcatttcttctggaact 628
              ||||||||||||||||||||
Sbjct: 120224 agggcatttcttctggaact 120243
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>gb|AY108289.1| Zea mays PCO091564 mRNA sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 cctaatacatcaacattttt 315
           ||||||||||||||||||||
Sbjct: 388 cctaatacatcaacattttt 369
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>emb|AJ276228.1|TBO276228 Tuber borchii chs3 gene for chitin synthase III, exons 1-4
          Length = 3429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tcctcagccatactacctca 142
           ||||||||||||||||||||
Sbjct: 131 tcctcagccatactacctca 150
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>dbj|AP006300.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-1305B12, complete
            sequence
          Length = 154336

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 324  acaaaaaatatataatggaaggctacat 351
            ||||||| |||||| |||||||||||||
Sbjct: 1851 acaaaaattatatattggaaggctacat 1824
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>emb|AL929192.16| Zebrafish DNA sequence from clone CH211-250E5 in linkage group 22,
             complete sequence
          Length = 112623

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ttgttcatcttcaggtgctt 599
             ||||||||||||||||||||
Sbjct: 76288 ttgttcatcttcaggtgctt 76307
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 458     catttccatacattcatcta 477
               ||||||||||||||||||||
Sbjct: 3387399 catttccatacattcatcta 3387418
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>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete
             sequence
          Length = 116160

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gtgatgatggtacaacaatg 498
             ||||||||||||||||||||
Sbjct: 84320 gtgatgatggtacaacaatg 84339


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,905,971
Number of Sequences: 3902068
Number of extensions: 6905971
Number of successful extensions: 145781
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145603
Number of HSP's gapped (non-prelim): 175
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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