Clone Name	rbags37d14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_189353.1| Oryza sativa (japonica cultivar-group), predic...	105	2e-19
2	dbj|AK105000.2| Oryza sativa (japonica cultivar-group) cDNA clon...	105	2e-19
3	dbj|AK100099.1| Oryza sativa (japonica cultivar-group) cDNA clon...	105	2e-19
4	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
5	dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
6	gb|AY108364.1| Zea mays PCO113346 mRNA sequence	66	1e-07
7	emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H1...	44	0.55
8	gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Canc...	44	0.55
9	gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence	44	0.55
10	gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, comple...	44	0.55
11	gb|BC011364.1| Homo sapiens cDNA clone IMAGE:4157327	42	2.2
12	gb|BC030555.1| Homo sapiens acyl-Coenzyme A binding domain conta...	42	2.2
13	ref|NM_145698.1| Homo sapiens acyl-Coenzyme A binding domain con...	42	2.2
14	emb|Z81522.1|CEF32B4 Caenorhabditis elegans Cosmid F32B4, comple...	42	2.2
15	emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chr...	42	2.2
16	gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence	42	2.2
17	emb|CR860006.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0226 (from cl...	42	2.2
18	emb|CR858392.1| Pongo pygmaeus mRNA; cDNA DKFZp459G1432 (from cl...	42	2.2
19	emb|AL133064.1|HSM801335 Homo sapiens mRNA; cDNA DKFZp434A2417 (...	42	2.2
20	gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswe...	42	2.2
21	dbj|AK057469.1| Homo sapiens cDNA FLJ32907 fis, clone TESTI20057...	42	2.2
22	gb|AC105266.2| Homo sapiens chromosome 3 clone RP11-796K6, compl...	42	2.2
23	ref|NM_140354.1| Drosophila melanogaster CG14119-RA (CG14119), mRNA	42	2.2
24	gb|AF505653.1| Homo sapiens endozepine-related protein mRNA, com...	42	2.2
25	gb|AC007870.3|AC007870 Genomic sequence for Homo sapiens clone 4...	42	2.2
26	gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46...	42	2.2
27	emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chr...	42	2.2
28	dbj|AB082527.1| Homo sapiens mRNA for KIAA1996 protein	42	2.2
29	gb|AC167202.8| Mus musculus BAC RP24-243A15 (Roswell Park Cance...	40	8.5
30	ref|NM_213240.1| Danio rerio zgc:77247 (zgc:77247), mRNA	40	8.5
31	gb|AC119878.7| Mus musculus chromosome 3, clone RP24-329A3, comp...	40	8.5
32	gb|BC067137.1| Danio rerio zgc:77247, mRNA (cDNA clone MGC:77247...	40	8.5
33	gb|AC162616.7| Mus musculus chromosome 5, clone RP23-260P17, com...	40	8.5
34	gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co...	40	8.5
35	gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Canc...	40	8.5
36	gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, co...	40	8.5
37	gb|AC124708.2| Mus musculus BAC clone RP24-79O16 from 6, complet...	40	8.5
38	gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complet...	40	8.5
39	gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complet...	40	8.5
40	gb|AC145828.1| Pan troglodytes BAC clone RP43-7E4 from 7, comple...	40	8.5
41	emb|AL590368.11| Human DNA sequence from clone RP11-3K19 on chro...	40	8.5
42	gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence	40	8.5
43	emb|AL359766.9| Human DNA sequence from clone RP11-237N2 on chro...	40	8.5
44	emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 ...	40	8.5
45	gb|DQ455333.1| Medicago truncatula cDNA-AFLP fragment BT13M34_26...	40	8.5
46	dbj|AB108201.1| Phleum pratense DNA, SSR, microsatellite A09-G01	40	8.5
47	gb|AC090712.4| Mus musculus strain C57BL6/J chromosome 6 clone R...	40	8.5
48	dbj|AK038133.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ...	40	8.5
49	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.5
50	gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain ...	40	8.5
51	gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromo...	40	8.5
52	gb|AC069209.38| Homo sapiens 12 BAC RP11-340F14 (Roswell Park Ca...	40	8.5
53	gb|AC020596.8| Homo sapiens BAC clone RP11-365K23 from 2, comple...	40	8.5
54	gb|AC092431.7| Homo sapiens BAC clone RP11-77O7 from 2, complete...	40	8.5
55	gb|AC126673.3| Mus musculus BAC clone RP24-491A6 from chromosome...	40	8.5
56	dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D...	40	8.5
57	dbj|AK105001.2| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.5
58	emb|BX571705.10| Zebrafish DNA sequence from clone DKEY-261E22 i...	40	8.5
59	dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D...	40	8.5
60	gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome...	40	8.5
61	emb|AL928678.16| Mouse DNA sequence from clone RP23-273B19 on ch...	40	8.5
62	emb|BX248579.4| Human DNA sequence from clone DASS-285K8 on chro...	40	8.5
63	gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome...	40	8.5
64	gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome...	40	8.5
65	gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosom...	40	8.5
66	emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chro...	40	8.5
67	emb|Y12855.1|HSP2X7123 Homo sapiens P2X7 gene, exon 12 and 13	40	8.5

---

>ref|NM_189353.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2265

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                        
Query: 486  ttgctgtcgcttgtactcagccgcgcggcgggtgctctccatcgagatgaggagaaccgt 545
            |||||||| |||||| | ||||  ||| ||| ||||||||||| | ||||| ||||| ||
Sbjct: 2187 ttgctgtctcttgtagttagccatgcgacggttgctctccatccaaatgagaagaacagt 2128

                                                                        
Query: 546  catgtcagccgggctcacgccaccgatcctgccagcctggcctaaggtttgtggccttac 605
            ||| ||||| |||||||| || || || |||| |||||||||||  ||||||||||||||
Sbjct: 2127 catatcagctgggctcaccccgccaattctgctagcctggcctattgtttgtggccttac 2068

                                 
Query: 606  cttggaaagtttctcgcgagc 626
            ||| ||||||||||| |||||
Sbjct: 2067 ctttgaaagtttctcacgagc 2047



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 395  tggtggcgctggcacgaaccgcctcgtctgaagaatcatc 434
            ||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 2257 tggtggcactggcatgaaccacttcgtctgaagaatcatc 2218

---

>dbj|AK105000.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C12, full
            insert sequence
          Length = 1973

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                        
Query: 486  ttgctgtcgcttgtactcagccgcgcggcgggtgctctccatcgagatgaggagaaccgt 545
            |||||||| |||||| | ||||  ||| ||| ||||||||||| | ||||| ||||| ||
Sbjct: 1455 ttgctgtctcttgtagttagccatgcgacggttgctctccatccaaatgagaagaacagt 1396

                                                                        
Query: 546  catgtcagccgggctcacgccaccgatcctgccagcctggcctaaggtttgtggccttac 605
            ||| ||||| |||||||| || || || |||| |||||||||||  ||||||||||||||
Sbjct: 1395 catatcagctgggctcaccccgccaattctgctagcctggcctattgtttgtggccttac 1336

                                 
Query: 606  cttggaaagtttctcgcgagc 626
            ||| ||||||||||| |||||
Sbjct: 1335 ctttgaaagtttctcacgagc 1315



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 395  tggtggcgctggcacgaaccgcctcgtctgaagaatcatc 434
            ||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 1525 tggtggcactggcatgaaccacttcgtctgaagaatcatc 1486

---

>dbj|AK100099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D21, full
            insert sequence
          Length = 2674

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                        
Query: 486  ttgctgtcgcttgtactcagccgcgcggcgggtgctctccatcgagatgaggagaaccgt 545
            |||||||| |||||| | ||||  ||| ||| ||||||||||| | ||||| ||||| ||
Sbjct: 2130 ttgctgtctcttgtagttagccatgcgacggttgctctccatccaaatgagaagaacagt 2071

                                                                        
Query: 546  catgtcagccgggctcacgccaccgatcctgccagcctggcctaaggtttgtggccttac 605
            ||| ||||| |||||||| || || || |||| |||||||||||  ||||||||||||||
Sbjct: 2070 catatcagctgggctcaccccgccaattctgctagcctggcctattgtttgtggccttac 2011

                                 
Query: 606  cttggaaagtttctcgcgagc 626
            ||| ||||||||||| |||||
Sbjct: 2010 ctttgaaagtttctcacgagc 1990



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 395  tggtggcgctggcacgaaccgcctcgtctgaagaatcatc 434
            ||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 2200 tggtggcactggcatgaaccacttcgtctgaagaatcatc 2161

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                            
Query: 486      ttgctgtcgcttgtactcagccgcgcggcgggtgctctccatcgagatgaggagaaccgt 545
                |||||||| |||||| | ||||  ||| ||| ||||||||||| | ||||| ||||| ||
Sbjct: 42322189 ttgctgtctcttgtagttagccatgcgacggttgctctccatccaaatgagaagaacagt 42322248

                                                                            
Query: 546      catgtcagccgggctcacgccaccgatcctgccagcctggcctaaggtttgtggccttac 605
                ||| ||||| |||||||| || || || |||| |||||||||||  ||||||||||||||
Sbjct: 42322249 catatcagctgggctcaccccgccaattctgctagcctggcctattgtttgtggccttac 42322308

                  
Query: 606      ct 607
                ||
Sbjct: 42322309 ct 42322310



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 395      tggtggcgctggcacgaaccgcctcgtctgaagaatcatc 434
                ||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 42322119 tggtggcactggcatgaaccacttcgtctgaagaatcatc 42322158

---

>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0401G10
          Length = 160704

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                         
Query: 486   ttgctgtcgcttgtactcagccgcgcggcgggtgctctccatcgagatgaggagaaccgt 545
             |||||||| |||||| | ||||  ||| ||| ||||||||||| | ||||| ||||| ||
Sbjct: 94146 ttgctgtctcttgtagttagccatgcgacggttgctctccatccaaatgagaagaacagt 94205

                                                                         
Query: 546   catgtcagccgggctcacgccaccgatcctgccagcctggcctaaggtttgtggccttac 605
             ||| ||||| |||||||| || || || |||| |||||||||||  ||||||||||||||
Sbjct: 94206 catatcagctgggctcaccccgccaattctgctagcctggcctattgtttgtggccttac 94265

               
Query: 606   ct 607
             ||
Sbjct: 94266 ct 94267



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 395   tggtggcgctggcacgaaccgcctcgtctgaagaatcatc 434
             ||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 94076 tggtggcactggcatgaaccacttcgtctgaagaatcatc 94115

---

>gb|AY108364.1| Zea mays PCO113346 mRNA sequence
          Length = 937

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                       
Query: 518 tgctctccatcgagatgaggagaaccgtcatgtcagccgggctcacgccaccgatcctgc 577
           ||||||||||| | ||||||||| | |||||||| || |||||||| || |||||  |||
Sbjct: 891 tgctctccatccaaatgaggagatctgtcatgtctgctgggctcacaccgccgattatgc 832

                                                            
Query: 578 cagcctggcctaaggtttgtggccttaccttggaaagtttctcgcgagc 626
            ||| || ||||  |||||||| |  ||||||||||||||||| |||||
Sbjct: 831 tagcatgacctattgtttgtggacgcaccttggaaagtttctcacgagc 783

---

>emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H13, complete sequence
          Length = 191668

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 38     tgtgtatatatgtacacaaaaacagc 63
              |||||||||||||||||| |||||||
Sbjct: 166233 tgtgtatatatgtacacataaacagc 166208

---

>gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91600

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 42    tatatatgtacacaaaaacagc 63
             ||||||||||||||||||||||
Sbjct: 89132 tatatatgtacacaaaaacagc 89153

---

>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence
          Length = 100258

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 42    tatatatgtacacaaaaacagc 63
             ||||||||||||||||||||||
Sbjct: 92194 tatatatgtacacaaaaacagc 92173

---

>gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, complete sequence
          Length = 177517

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 34     ttcatgtgtatatatgtacaca 55
              ||||||||||||||||||||||
Sbjct: 146912 ttcatgtgtatatatgtacaca 146933

---

>gb|BC011364.1| Homo sapiens cDNA clone IMAGE:4157327
          Length = 2096

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1824 atgtgtatatatgtacacaaa 1804

---

>gb|BC030555.1| Homo sapiens acyl-Coenzyme A binding domain containing 5, mRNA (cDNA
            clone MGC:40079 IMAGE:5218685), complete cds
          Length = 2327

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1821 atgtgtatatatgtacacaaa 1801

---

>ref|NM_145698.1| Homo sapiens acyl-Coenzyme A binding domain containing 5 (ACBD5),
            mRNA
          Length = 2327

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1821 atgtgtatatatgtacacaaa 1801

---

>emb|Z81522.1|CEF32B4 Caenorhabditis elegans Cosmid F32B4, complete sequence
          Length = 41212

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    atgtgtatatatgtacacaaa 57
             |||||||||||||||||||||
Sbjct: 21939 atgtgtatatatgtacacaaa 21919

---

>emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chromosome 10 Contains the
             5' end of the YME1L1 gene for YME1-like 1 (S. cerevisiae),
             the gene for a novel protein kinase domain containing
             protein (FLJ14813), the gene for endozepine-related
             protein precursor (DKFZp434A2417) (FLJ32907 KIAA1996), a
             novel pseudogene (KIAA0563, FLJ34306), the 5' end of a
             novel pseudogene (FLJ10376) and six CpG islands, complete
             sequence
          Length = 155962

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    atgtgtatatatgtacacaaa 57
             |||||||||||||||||||||
Sbjct: 69584 atgtgtatatatgtacacaaa 69604

---

>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 441   ggcattggcattggccctggc 461
             |||||||||||||||||||||
Sbjct: 64542 ggcattggcattggccctggc 64522

---

>emb|CR860006.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0226 (from clone DKFZp459A0226)
          Length = 3913

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1810 atgtgtatatatgtacacaaa 1790

---

>emb|CR858392.1| Pongo pygmaeus mRNA; cDNA DKFZp459G1432 (from clone DKFZp459G1432)
          Length = 4146

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 2032 atgtgtatatatgtacacaaa 2012

---

>emb|AL133064.1|HSM801335 Homo sapiens mRNA; cDNA DKFZp434A2417 (from clone DKFZp434A2417)
          Length = 3099

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1000 atgtgtatatatgtacacaaa 980

---

>gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 175679

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 437   tcctggcattggcattggccctggc 461
             |||||||||||||||||| ||||||
Sbjct: 98138 tcctggcattggcattggtcctggc 98114

---

>dbj|AK057469.1| Homo sapiens cDNA FLJ32907 fis, clone TESTI2005742, highly similar to
            ENDOZEPINE-RELATED PROTEIN PRECURSOR
          Length = 1926

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1784 atgtgtatatatgtacacaaa 1764

---

>gb|AC105266.2| Homo sapiens chromosome 3 clone RP11-796K6, complete sequence
          Length = 181462

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     atgtgtatatatgtacacaaa 57
              |||||||||||||||||||||
Sbjct: 162030 atgtgtatatatgtacacaaa 162050

---

>ref|NM_140354.1| Drosophila melanogaster CG14119-RA (CG14119), mRNA
          Length = 420

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 437 tcctggcattggcattggccctggc 461
           |||||||||||||||||| ||||||
Sbjct: 36  tcctggcattggcattggtcctggc 12

---

>gb|AF505653.1| Homo sapiens endozepine-related protein mRNA, complete cds
          Length = 2607

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1658 atgtgtatatatgtacacaaa 1638

---

>gb|AC007870.3|AC007870 Genomic sequence for Homo sapiens clone 4P6, complete sequence
          Length = 134757

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    atgtgtatatatgtacacaaa 57
             |||||||||||||||||||||
Sbjct: 27990 atgtgtatatatgtacacaaa 28010

---

>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete
             sequence
          Length = 272016

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 437   tcctggcattggcattggccctggc 461
             |||||||||||||||||| ||||||
Sbjct: 17902 tcctggcattggcattggtcctggc 17878

---

>emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chromosome 4, complete
             sequence
          Length = 183261

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 37    atgtgtatatatgtacacaaaaaca 61
             ||||||||||||||||||| |||||
Sbjct: 75368 atgtgtatatatgtacacacaaaca 75392

---

>dbj|AB082527.1| Homo sapiens mRNA for KIAA1996 protein
          Length = 3682

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgtgtatatatgtacacaaa 57
            |||||||||||||||||||||
Sbjct: 1620 atgtgtatatatgtacacaaa 1600

---

>gb|AC167202.8| Mus musculus  BAC RP24-243A15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 180658

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 97792 catgtgtatatatgtacaca 97773

---

>ref|NM_213240.1| Danio rerio zgc:77247 (zgc:77247), mRNA
          Length = 4639

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  cctctatgatctccatgctg 152
            ||||||||||||||||||||
Sbjct: 1886 cctctatgatctccatgctg 1867

---

>gb|AC119878.7| Mus musculus chromosome 3, clone RP24-329A3, complete sequence
          Length = 132644

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ttcatgtgtatatatgtaca 53
             ||||||||||||||||||||
Sbjct: 22307 ttcatgtgtatatatgtaca 22288

---

>gb|BC067137.1| Danio rerio zgc:77247, mRNA (cDNA clone MGC:77247 IMAGE:6963618),
            complete cds
          Length = 4639

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  cctctatgatctccatgctg 152
            ||||||||||||||||||||
Sbjct: 1886 cctctatgatctccatgctg 1867

---

>gb|AC162616.7| Mus musculus chromosome 5, clone RP23-260P17, complete sequence
          Length = 180400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ttcatgtgtatatatgtaca 53
             ||||||||||||||||||||
Sbjct: 79592 ttcatgtgtatatatgtaca 79573

---

>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     tgaaaagattcatgtgtatatatg 49
              |||||| |||||||||||||||||
Sbjct: 147717 tgaaaatattcatgtgtatatatg 147740

---

>gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 264561

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 24469 catgtgtatatatgtacaca 24450

---

>gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, complete sequence
          Length = 176990

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 22     attttgaaaagattcatgtgtatatatgtaca 53
              ||||||||| |||| ||| |||||||||||||
Sbjct: 158573 attttgaaaggatttatgagtatatatgtaca 158542

---

>gb|AC124708.2| Mus musculus BAC clone RP24-79O16 from 6, complete sequence
          Length = 171638

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     catgtgtatatatgtacaca 55
              ||||||||||||||||||||
Sbjct: 158192 catgtgtatatatgtacaca 158173

---

>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence
          Length = 234326

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     atgtgtatatatgtacacaa 56
              ||||||||||||||||||||
Sbjct: 102533 atgtgtatatatgtacacaa 102552

---

>gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complete sequence
          Length = 136098

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 73359 catgtgtatatatgtacaca 73340



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 73341 catgtgtatatatgtacaca 73322



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 73323 catgtgtatatatgtacaca 73304

---

>gb|AC145828.1| Pan troglodytes BAC clone RP43-7E4 from 7, complete sequence
          Length = 139712

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 50336 catgtgtatatatgtacaca 50355

---

>emb|AL590368.11| Human DNA sequence from clone RP11-3K19 on chromosome 9 Contains the 5'
             end of the gene for CDw92 antigen (CDW92) (CTL1) and a CpG
             island, complete sequence
          Length = 92910

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   atcctgccagcctggcctaa 590
             ||||||||||||||||||||
Sbjct: 71328 atcctgccagcctggcctaa 71347

---

>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence
          Length = 157615

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   ggcattggcattggccctgg 460
             ||||||||||||||||||||
Sbjct: 38358 ggcattggcattggccctgg 38339

---

>emb|AL359766.9| Human DNA sequence from clone RP11-237N2 on chromosome 13, complete
             sequence
          Length = 86774

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tgtgtatatatgtacacaaa 57
             ||||||||||||||||||||
Sbjct: 79426 tgtgtatatatgtacacaaa 79445

---

>emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 on chromosome 6p22.1-24.3
             Contains part of a novel gene, complete sequence
          Length = 105960

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 598   ggccttaccttggaaagttt 617
             ||||||||||||||||||||
Sbjct: 50046 ggccttaccttggaaagttt 50065

---

>gb|DQ455333.1| Medicago truncatula cDNA-AFLP fragment BT13M34_267 sequence
          Length = 318

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 591 ggtttgtggccttaccttggaaagtttctcgcgagc 626
           |||||| ||||| |||||||||||||| || |||||
Sbjct: 136 ggtttgaggcctaaccttggaaagtttttcacgagc 101

---

>dbj|AB108201.1| Phleum pratense DNA, SSR, microsatellite A09-G01
          Length = 588

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 36  catgtgtatatatgtacacaaaaa 59
           |||||| |||||||||||||||||
Sbjct: 229 catgtgcatatatgtacacaaaaa 252

---

>gb|AC090712.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-230F22, complete
             sequence
          Length = 138973

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 58034 catgtgtatatatgtacaca 58053

---

>dbj|AK038133.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130081A06 product:unclassifiable, full
            insert sequence
          Length = 3079

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   tatatatgtacacaaaaaca 61
            ||||||||||||||||||||
Sbjct: 2361 tatatatgtacacaaaaaca 2342

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 387      ttacgcggtggtggcgctgg 406
                ||||||||||||||||||||
Sbjct: 21049075 ttacgcggtggtggcgctgg 21049056

---

>gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain 8 Dnahc8 gene, partial cds
          Length = 150164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tatatatgtacacaaaaaca 61
             ||||||||||||||||||||
Sbjct: 76097 tatatatgtacacaaaaaca 76078

---

>gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromosome 7, complete
             sequence
          Length = 171501

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 93824 catgtgtatatatgtacaca 93805

---

>gb|AC069209.38| Homo sapiens 12 BAC RP11-340F14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157792

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    gtgtatatatgtacacaaaa 58
             ||||||||||||||||||||
Sbjct: 12808 gtgtatatatgtacacaaaa 12827

---

>gb|AC020596.8| Homo sapiens BAC clone RP11-365K23 from 2, complete sequence
          Length = 132023

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tatatatgtacacaaaaaca 61
             ||||||||||||||||||||
Sbjct: 46478 tatatatgtacacaaaaaca 46497

---

>gb|AC092431.7| Homo sapiens BAC clone RP11-77O7 from 2, complete sequence
          Length = 192725

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 32952 catgtgtatatatgtacaca 32933

---

>gb|AC126673.3| Mus musculus BAC clone RP24-491A6 from chromosome 13, complete sequence
          Length = 123585

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 82890 catgtgtatatatgtacaca 82909

---

>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    ttacgcggtggtggcgctgg 406
              ||||||||||||||||||||
Sbjct: 141164 ttacgcggtggtggcgctgg 141145

---

>dbj|AK105001.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D11, full
           insert sequence
          Length = 1840

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ttacgcggtggtggcgctgg 406
           ||||||||||||||||||||
Sbjct: 254 ttacgcggtggtggcgctgg 273

---

>emb|BX571705.10| Zebrafish DNA sequence from clone DKEY-261E22 in linkage group 4,
              complete sequence
          Length = 143674

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     tgtgtatatatgtacacaaaaaca 61
              ||||||||||| ||||||||||||
Sbjct: 138884 tgtgtatatatatacacaaaaaca 138907

---

>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ttacgcggtggtggcgctgg 406
             ||||||||||||||||||||
Sbjct: 70375 ttacgcggtggtggcgctgg 70356

---

>gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome 17, complete sequence
          Length = 218275

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tatatatgtacacaaaaaca 61
              ||||||||||||||||||||
Sbjct: 133638 tatatatgtacacaaaaaca 133619

---

>emb|AL928678.16| Mouse DNA sequence from clone RP23-273B19 on chromosome 2, complete
             sequence
          Length = 167304

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catgtgtatatatgtacaca 55
             ||||||||||||||||||||
Sbjct: 27526 catgtgtatatatgtacaca 27507

---

>emb|BX248579.4| Human DNA sequence from clone DASS-285K8 on chromosome 6, complete
             sequence
          Length = 115746

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tatatatgtacacaaaaaca 61
             ||||||||||||||||||||
Sbjct: 74577 tatatatgtacacaaaaaca 74596

---

>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence
          Length = 221010

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 22     attttgaaaagattcatgtgtatatatgtaca 53
              ||||||||| |||| ||| |||||||||||||
Sbjct: 179482 attttgaaaggatttatgagtatatatgtaca 179513

---

>gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome 13, complete sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     catgtgtatatatgtacaca 55
              ||||||||||||||||||||
Sbjct: 186546 catgtgtatatatgtacaca 186565

---

>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence
          Length = 177378

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tatatatgtacacaaaaaca 61
              ||||||||||||||||||||
Sbjct: 116536 tatatatgtacacaaaaaca 116555

---

>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete
             sequence
          Length = 151891

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 36    catgtgtatatatgtacacaaaaacagc 63
             ||||||||||||  ||||||||||||||
Sbjct: 73633 catgtgtatatacatacacaaaaacagc 73606

---

>emb|Y12855.1|HSP2X7123 Homo sapiens P2X7 gene, exon 12 and 13
          Length = 6839

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  gtgtatatatgtacacaaaa 58
           ||||||||||||||||||||
Sbjct: 179 gtgtatatatgtacacaaaa 198


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,229,765
Number of Sequences: 3902068
Number of extensions: 5229765
Number of successful extensions: 127935
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127743
Number of HSP's gapped (non-prelim): 192
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---